BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009979
(521 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/327 (38%), Positives = 192/327 (58%), Gaps = 4/327 (1%)
Query: 159 VAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL 218
V A PEV HLG ++LREL+V+++ F+++N++G GG+G VY G L D T VAVK L
Sbjct: 12 VPAEEDPEV-HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 70
Query: 219 LNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
R Q E +F+ EVE I H+NL+RL G+C R+LVY Y+ NG++ L
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
PL W R I LG+A+GL YLH+ +PK++HRD+K++NILLD+++ + DFGLAK
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPG 397
L+ + +V V GT G++APEY STG +E++DV+ +G++++E+I+G+ D +R
Sbjct: 191 LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 398 --EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHV 455
+V L++W+K ++ + E ++D LQ C + +RPKM V
Sbjct: 251 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 456 IHMLEAEEFPFRDERRAGREHGRSPHN 482
+ MLE + R E E R N
Sbjct: 311 VRMLEGDGLAERWEEWQKEEMFRQDFN 337
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 184/307 (59%), Gaps = 4/307 (1%)
Query: 159 VAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL 218
V A PEV HLG ++LREL+V+++ F ++N++G GG+G VY G L D VAVK L
Sbjct: 4 VPAEEDPEV-HLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL 62
Query: 219 LNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
R Q E +F+ EVE I H+NL+RL G+C R+LVY Y+ NG++ L
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
PL W R I LG+A+GL YLH+ +PK++HRD+K++NILLD+++ + DFGLAK
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPG 397
L+ + +V V G G++APEY STG +E++DV+ +G++++E+I+G+ D +R
Sbjct: 183 LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 398 --EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHV 455
+V L++W+K ++ + E ++D LQ C + +RPKM V
Sbjct: 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 456 IHMLEAE 462
+ MLE +
Sbjct: 303 VRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 167/285 (58%), Gaps = 6/285 (2%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIG 237
L +LE +TN F + +IG G +G VY GVL D VA+K Q +EF+ E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
RH +LV L+G+C E +L+Y+Y++NGNL++ L+G P ++WE R+ I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE--RSYVTTRVMGTFG 355
GL YLH ++HRD+KS NILLD+ + PK++DFG++K G E ++++ V GT G
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELDQTHLXXVVKGTLG 206
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE 415
Y+ PEY G L E+SDVYSFG+++ EV+ R+ + S P VNL EW N E
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 416 GVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
++DP L +K C+ ++ RP MG V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 167/285 (58%), Gaps = 6/285 (2%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIG 237
L +LE +TN F + +IG G +G VY GVL D VA+K Q +EF+ E+E +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
RH +LV L+G+C E +L+Y+Y++NGNL++ L+G P ++WE R+ I +G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE--RSYVTTRVMGTFG 355
GL YLH ++HRD+KS NILLD+ + PK++DFG++K G E ++++ V GT G
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQTHLXXVVKGTLG 206
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE 415
Y+ PEY G L E+SDVYSFG+++ EV+ R+ + S P VNL EW N E
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 416 GVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
++DP L +K C+ ++ RP MG V+ LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 167/300 (55%), Gaps = 23/300 (7%)
Query: 174 HWYTLRELEVSTNGFADE------NVIGEGGYGIVYHGVLEDNTNVAVKNLLN----NRG 223
H ++ EL+ TN F + N +GEGG+G+VY G + +NT VAVK L
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+ +++F E++ + + +H+NLV LLG+ ++G LVY Y+ NG+L L G PL
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPL 130
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+W +R I G A G+ +LHE +HRDIKS+NILLD+ + K+SDFGLA+ +E+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--ASEK 185
Query: 344 ---SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVN 400
+ + +R++GT Y+APE A G + +SD+YSFG++++E+I+G VD R P ++
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLL 243
Query: 401 LVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
L + + E +D ++ + S C+ +KRP + V +L+
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 164/301 (54%), Gaps = 25/301 (8%)
Query: 174 HWYTLRELEVSTNGFADE------NVIGEGGYGIVYHGVLEDNTNVAVKNLLN----NRG 223
H ++ EL+ TN F + N +GEGG+G+VY G + +NT VAVK L
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+ +++F E++ + + +H+NLV LLG+ ++G LVY Y+ NG+L L G PL
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPL 130
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+W +R I G A G+ +LHE +HRDIKS+NILLD+ + K+SDFGLA+ A
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR---ASE 184
Query: 344 SYVTT----RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV 399
+ T R++GT Y+APE A G + +SD+YSFG++++E+I+G VD R P ++
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QL 242
Query: 400 NLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHML 459
L + + E +D ++ + S C+ +KRP + V +L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 460 E 460
+
Sbjct: 302 Q 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 165/300 (55%), Gaps = 23/300 (7%)
Query: 174 HWYTLRELEVSTNGFADE------NVIGEGGYGIVYHGVLEDNTNVAVKNLLN----NRG 223
H ++ EL+ TN F + N +GEGG+G+VY G + +NT VAVK L
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 65
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+ +++F E++ + + +H+NLV LLG+ ++G LVY Y+ NG+L L G PL
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPL 124
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+W +R I G A G+ +LHE +HRDIKS+NILLD+ + K+SDFGLA+ +E+
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--ASEK 179
Query: 344 ---SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVN 400
+ R++GT Y+APE A G + +SD+YSFG++++E+I+G VD R P ++
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLL 237
Query: 401 LVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
L + + E +D ++ + S C+ +KRP + V +L+
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDAD-STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 19/298 (6%)
Query: 174 HWYTLRELEVSTNGFADE------NVIGEGGYGIVYHGVLEDNTNVAVKNLLN----NRG 223
H ++ EL+ TN F + N GEGG+G+VY G + +NT VAVK L
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 62
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+ +++F E++ + +H+NLV LLG+ ++G LVY Y NG+L L G PL
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPL 121
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+W R I G A G+ +LHE +HRDIKS+NILLD+ + K+SDFGLA+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 344 SYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLV 402
V +R++GT Y APE A G + +SD+YSFG++++E+I+G VD R P ++ L
Sbjct: 179 QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLD 236
Query: 403 EWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+ + E +D + + S C+ +KRP + V +L+
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXNDAD-STSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIV----YHGVLEDNTNVAVKNLLNNRGQAEK--EFKVEVEAIGRVRHKNLVRL 247
IG G +G V +HG ++VAVK L+ AE+ EF EV + R+RH N+V
Sbjct: 45 IGAGSFGTVHRAEWHG-----SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G + + +V EY+ G+L + LH G L R+++ AKG+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
P +VHRD+KS N+L+DK++ K+ DFGL++ L A + GT ++APE
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 368 NERSDVYSFGILIMEVISGRNP 389
NE+SDVYSFG+++ E+ + + P
Sbjct: 217 NEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIV----YHGVLEDNTNVAVKNLLNNRGQAEK--EFKVEVEAIGRVRHKNLVRL 247
IG G +G V +HG ++VAVK L+ AE+ EF EV + R+RH N+V
Sbjct: 45 IGAGSFGTVHRAEWHG-----SDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G + + +V EY+ G+L + LH G L R+++ AKG+ YLH
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGM 366
P +VHR++KS N+L+DK++ K+ DFGL++L + ++++++ GT ++APE
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
NE+SDVYSFG+++ E+ + + P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP 238
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E++F E E + ++ H LV+L G C E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV+E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 190
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 191 WSFGVLMWEVFSEGKIPYE 209
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E++F E E + ++ H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV+E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEA---SVIHR 127
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 188 WSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E++F E E + ++ H LV+L G C E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV+E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 185
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 186 WSFGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E++F E E + ++ H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV+E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 187
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 188 WSFGVLMWEVFSEGKIPYE 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLL---NNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G GG VY + ED N VA+K + + + K F+ EV ++ H+N+V +
Sbjct: 19 LGGGGMSTVY--LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ E LV EYI+ L +++ H PL+ + +N G+ + H+
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM-- 130
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
++VHRDIK NIL+D K+ DFG+AK L T V+GT Y +PE A
Sbjct: 131 -RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 368 NERSDVYSFGILIMEVISGRNP 389
+E +D+YS GI++ E++ G P
Sbjct: 190 DECTDIYSIGIVLYEMLVGEPP 211
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E +F E E + ++ H LV+L G C E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV+E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 207
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 208 WSFGVLMWEVFSEGKIPYE 226
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G+V+ G + VA+K + +E++F E E + ++ H LV+L G C E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
A LV E++++G L +L G + E + + L +G+ YL E V+HR
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
D+ + N L+ + K+SDFG+ + + ++ +T + +PE S + +SDV
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDV 188
Query: 374 YSFGILIMEVIS-GRNPVD 391
+SFG+L+ EV S G+ P +
Sbjct: 189 WSFGVLMWEVFSEGKIPYE 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 124/224 (55%), Gaps = 25/224 (11%)
Query: 183 VSTNGFADENVIGEGGYGIVYHG-VLEDNTNVAVKNLL--NNRGQAE-----KEFKVEVE 234
++ N E IG+GG+G+V+ G +++D + VA+K+L+ ++ G+ E +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 235 AIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG 294
+ + H N+V+L G RM V E++ G+L H + P+ W +++ ++L
Sbjct: 76 IMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLD 130
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILL-----DKQWNPKLSDFGLAKLLGAERSYVTTR 349
A G+ Y+ + P +VHRD++S NI L + K++DFGL++ + + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSG 185
Query: 350 VMGTFGYVAPEY--ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
++G F ++APE A E++D YSF +++ +++G P D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 19/219 (8%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN-----VAVKNLLNNRGQAEKE---FKVEV 233
E+ + + VIG G +G VY G+L+ ++ VA+K L G EK+ F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL--KAGYTEKQRVDFLGEA 97
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
+G+ H N++RL G ++ M++ EY++NG L+++L G S L + ++
Sbjct: 98 GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL---VGMLR 154
Query: 294 GTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVM 351
G A G+ YL VHRD+ + NIL++ K+SDFGL+++L E +Y T+
Sbjct: 155 GIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ APE S SDV+SFGI++ EV++ G P
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 123/224 (54%), Gaps = 25/224 (11%)
Query: 183 VSTNGFADENVIGEGGYGIVYHG-VLEDNTNVAVKNLL--NNRGQAE-----KEFKVEVE 234
++ N E IG+GG+G+V+ G +++D + VA+K+L+ ++ G+ E +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 235 AIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG 294
+ + H N+V+L G RM V E++ G+L H + P+ W +++ ++L
Sbjct: 76 IMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLD 130
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILL-----DKQWNPKLSDFGLAKLLGAERSYVTTR 349
A G+ Y+ + P +VHRD++S NI L + K++DF L++ + + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSG 185
Query: 350 VMGTFGYVAPEY--ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
++G F ++APE A E++D YSF +++ +++G P D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 123/224 (54%), Gaps = 25/224 (11%)
Query: 183 VSTNGFADENVIGEGGYGIVYHG-VLEDNTNVAVKNLL--NNRGQAE-----KEFKVEVE 234
++ N E IG+GG+G+V+ G +++D + VA+K+L+ ++ G+ E +EF+ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 235 AIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG 294
+ + H N+V+L G RM V E++ G+L H + P+ W +++ ++L
Sbjct: 76 IMSNLNHPNIVKLYG-LMHNPPRM-VMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLD 130
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILL-----DKQWNPKLSDFGLAKLLGAERSYVTTR 349
A G+ Y+ + P +VHRD++S NI L + K++DFG ++ + + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSG 185
Query: 350 VMGTFGYVAPEY--ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
++G F ++APE A E++D YSF +++ +++G P D
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 29/249 (11%)
Query: 158 TVAAAITPEVSHLGWGHWYTLRE---LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVA 214
TV P+ L W RE LEV +G+G +G V+ G T VA
Sbjct: 245 TVCPTSKPQTQGLAKDAWEIPRESLRLEVK---------LGQGCFGEVWMGTWNGTTRVA 295
Query: 215 VKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLH 274
+K L E F E + + ++RH+ LV+L +E +V EY+ G+L +L
Sbjct: 296 IKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK 353
Query: 275 GDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG 334
G+ G + L + M + A G+ Y+ VHRD++++NIL+ + K++DFG
Sbjct: 354 GETGKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 408
Query: 335 LAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
LA+L+ E + T R F + APE A G +SDV+SFGIL+ E+ + GR P
Sbjct: 409 LARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY- 465
Query: 392 YSRPPGEVN 400
PG VN
Sbjct: 466 ----PGMVN 470
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 158 TVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKN 217
TV P+ L W E+ E +G+G +G V+ G T VA+K
Sbjct: 162 TVCPTSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKT 215
Query: 218 LLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
L E F E + + ++RH+ LV+L +E +V EY+ G+L +L G+
Sbjct: 216 LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGET 273
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
G + L + M + A G+ Y+ VHRD++++NIL+ + K++DFGLA+
Sbjct: 274 GKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 338 LLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSR 394
L+ E + T R F + APE A G +SDV+SFGIL+ E+ + GR P
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---- 382
Query: 395 PPGEVN 400
PG VN
Sbjct: 383 -PGMVN 387
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 158 TVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKN 217
TV P+ L W E+ E +G+G +G V+ G T VA+K
Sbjct: 162 TVCPTSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKT 215
Query: 218 LLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
L E F E + + ++RH+ LV+L +E +V EY+ G+L +L G+
Sbjct: 216 LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGET 273
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
G + L + M + A G+ Y+ VHRD++++NIL+ + K++DFGLA+
Sbjct: 274 GKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 338 LLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSR 394
L+ E + T R F + APE A G +SDV+SFGIL+ E+ + GR P
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---- 382
Query: 395 PPGEVN 400
PG VN
Sbjct: 383 -PGMVN 387
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEV 233
H +E+EV E V+G G +G+V +VA+K + + K F VE+
Sbjct: 4 HMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAK-DVAIKQIESE--SERKAFIVEL 53
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
+ RV H N+V+L G C LV EY + G+L LHG P T M+ L
Sbjct: 54 RQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCL 110
Query: 294 GTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVM 351
++G+ YLH ++PK ++HRD+K N+LL K+ DFG A + T
Sbjct: 111 QCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNK 165
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
G+ ++APE +E+ DV+S+GI++ EVI+ R P D
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 20/220 (9%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEV 233
H +E+EV E V+G G +G+V +VA+K + + K F VE+
Sbjct: 3 HMIDYKEIEV-------EEVVGRGAFGVVCKAKWRAK-DVAIKQIESE--SERKAFIVEL 52
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
+ RV H N+V+L G C LV EY + G+L LHG P T M+ L
Sbjct: 53 RQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCL 109
Query: 294 GTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVM 351
++G+ YLH ++PK ++HRD+K N+LL K+ DFG A + T
Sbjct: 110 QCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNK 164
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
G+ ++APE +E+ DV+S+GI++ EVI+ R P D
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 42/294 (14%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR----GQAEKEFKVEVEAI 236
LE+ E +IG GG+G VY + VAVK ++ Q + + E +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-VGPHSPLTWEIRMNIILGT 295
++H N++ L G C + + LV E+ G L + L G + P + W +++
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN--------PKLSDFGLAKLLGAERSYVT 347
A+G+ YLH+ ++HRD+KSSNIL+ ++ K++DFGLA+ + T
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRT 169
Query: 348 TRV--MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
T++ G + ++APE M ++ SDV+S+G+L+ E+++G P
Sbjct: 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP---------------F 214
Query: 406 KTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHML 459
+ + A GV +L S C +P+ H RP +++ L
Sbjct: 215 RGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY++ G+L +L G+ G + L + M+ + A G+ Y
Sbjct: 70 EKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--ASGMAY 126
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 181
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 218
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 158 TVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKN 217
TV P+ L W E+ E +G+G +G V+ G T VA+K
Sbjct: 162 TVCPTSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKT 215
Query: 218 LLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
L E F E + + ++RH+ LV+L +E +V EY+ G+L +L G+
Sbjct: 216 LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGET 273
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
G + L + M + A G+ Y+ VHRD++++NIL+ + K++DFGLA+
Sbjct: 274 GKYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 328
Query: 338 LLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSR 394
L+ E + T R F + APE A G +SDV+SFGIL+ E+ + GR P
Sbjct: 329 LI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---- 382
Query: 395 PPGEVN 400
PG VN
Sbjct: 383 -PGMVN 387
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY++ G+L +L G+ G + L + M+ + A G+ Y
Sbjct: 70 EKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI--ASGMAY 126
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 127 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP 181
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 182 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 218
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 87
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 88 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 143
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 144 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 252
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 253 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +++ EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 194 IGEGGYGIVY----HGVL--EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V+ H +L +D VAVK L A ++F+ E E + ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWL--HG----------DVGPHSPLTWEIRMNIILGT 295
G C EG ++V+EY+ +G+L ++L HG DV P PL + +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQV 144
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTF 354
A G+ YL GL VHRD+ + N L+ + K+ DFG+++ + + Y V R M
Sbjct: 145 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++ PE SDV+SFG+++ E+ + G+ P
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 94
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 95 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 259
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 260 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 96 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 151
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 260
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 261 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 62
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G+ G + L + M + A G+ Y
Sbjct: 63 EKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAY 119
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 120 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 174
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 175 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 211
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 113
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 114 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 169
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 170 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 278
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 279 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 311
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 194 IGEGGYGIVY----HGVL--EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V+ H +L +D VAVK L A ++F+ E E + ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWL--HG----------DVGPHSPLTWEIRMNIILGT 295
G C EG ++V+EY+ +G+L ++L HG DV P PL + +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQV 138
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTF 354
A G+ YL GL VHRD+ + N L+ + K+ DFG+++ + + Y V R M
Sbjct: 139 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++ PE SDV+SFG+++ E+ + G+ P
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +++ EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 63
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 64 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 120
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 121 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 175
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 61
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 62 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 118
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 119 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 173
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 174 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 93
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 94 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYL-- 147
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 258
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 259 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 96 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 151
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 152 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 260
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 261 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 90
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 91 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYL-- 144
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 255
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 256 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 92
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 93 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 148
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 149 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 257
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 258 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 290
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 114
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 115 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 170
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT---FGYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + + Y G ++A E
Sbjct: 171 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 279
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 280 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 312
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 24/216 (11%)
Query: 194 IGEGGYGIVY----HGVL--EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V+ H +L +D VAVK L A ++F+ E E + ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWL--HG----------DVGPHSPLTWEIRMNIILGT 295
G C EG ++V+EY+ +G+L ++L HG DV P PL + +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQV 167
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTF 354
A G+ YL GL VHRD+ + N L+ + K+ DFG+++ + + Y V R M
Sbjct: 168 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++ PE SDV+SFG+++ E+ + G+ P
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 65
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G+ G + L + M + A G+ Y
Sbjct: 66 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQI--ASGMAY 122
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 123 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 177
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 178 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 214
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD++++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 114/219 (52%), Gaps = 16/219 (7%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVL----EDNTNVAVKNLLNNRGQAEK-EFKVEV 233
RE+E S E +IG G G V +G L + + VA+K L + ++ +F E
Sbjct: 44 REIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
+G+ H N++RL G G M+V EY++NG+L+ +L G + + + ++
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLR 158
Query: 294 GTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVM 351
G G+ YL + VHRD+ + N+L+D K+SDFGL+++L + +Y TT
Sbjct: 159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ APE + + SDV+SFG+++ EV++ G P
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 17/222 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G+G +G V+ G T VA+K L E F E + + ++RH
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ LV+L +E +V EY+ G+L +L G++G + L + M + A G+ Y
Sbjct: 73 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQI--ASGMAY 129
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ VHRD+ ++NIL+ + K++DFGLA+L+ E + T R F + AP
Sbjct: 130 VERM---NYVHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
E A G +SDV+SFGIL+ E+ + GR P PG VN
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPY-----PGMVN 221
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 23/245 (9%)
Query: 159 VAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL 218
V P+ L W E+ E +G+G +G V+ G T VA+K L
Sbjct: 164 VCPTSKPQTQGLAKDAW------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 217
Query: 219 LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVG 278
E F E + + ++RH+ LV+L +E +V EY+ G+L +L G++G
Sbjct: 218 KPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMG 275
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
+ L + M + A G+ Y+ VHRD++++NIL+ + K++DFGL +L
Sbjct: 276 KYLRLPQLVDMAAQI--ASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRL 330
Query: 339 LGAERSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRP 395
+ E + T R F + APE A G +SDV+SFGIL+ E+ + GR P
Sbjct: 331 I--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----- 383
Query: 396 PGEVN 400
PG VN
Sbjct: 384 PGMVN 388
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 96
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 97 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ +L E V + ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 261
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 262 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 94
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ YL
Sbjct: 95 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKYLAS 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 151 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 259
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 260 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 16/219 (7%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVL----EDNTNVAVKNLLNNRGQAEK-EFKVEV 233
RE+E S E +IG G G V +G L + + VA+K L + ++ +F E
Sbjct: 44 REIEASRIHI--EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
+G+ H N++RL G G M+V EY++NG+L+ +L G + + + ++
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL---VGMLR 158
Query: 294 GTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT 353
G G+ YL + VHRD+ + N+L+D K+SDFGL+++L + T G
Sbjct: 159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGK 215
Query: 354 FG--YVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ APE + + SDV+SFG+++ EV++ G P
Sbjct: 216 IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 142
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 201 DVWSFGILLTEIVTHGRIP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 141
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 200 DVWSFGILLTEIVTHGRIP 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 18/228 (7%)
Query: 172 WGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEK 227
WG +E++VS E VIG G +G V G L+ + VA+K L + ++
Sbjct: 2 WGSMEFAKEIDVSYVKI--EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 59
Query: 228 -EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWE 286
EF E +G+ H N++RL G M++ E+++NG L+ +L + G + +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL- 118
Query: 287 IRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV 346
+ ++ G A G+ YL E VHRD+ + NIL++ K+SDFGL++ L S
Sbjct: 119 --VGMLRGIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 347 T-TRVMG---TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
T T +G + APE + SD +S+GI++ EV+S G P
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 138
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 197 DVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 139
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 143
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 202 DVWSFGILLTEIVTHGRIP 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 135
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 194 DVWSFGILLTEIVTHGRIP 212
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 154
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 155 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFLAS 210
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 211 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 319
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 320 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 352
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 134
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 193 DVWSFGILLTEIVTHGRIP 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIR--MNIILGTAKGLTYLHEGLEPKVV 311
+V ++ + +L LH S +E++ ++I TA+G+ YLH ++
Sbjct: 80 -PQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSII 130
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPE---YASTGML 367
HRD+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 368 NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPC 427
+ +SDVY+FGI++ E+++G+ P YS ++E + G L P L K
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIEMV--------GRGSLSPDL-SKVR 239
Query: 428 SXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
S C+ +RP ++ +E
Sbjct: 240 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 96
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 97 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 261
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 262 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 17/210 (8%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 372 DVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
DV+SFGIL+ E+++ GR P PG N
Sbjct: 192 DVWSFGILLTEIVTHGRIPY-----PGMTN 216
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 96 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 260
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 261 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 17/210 (8%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 128
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 372 DVYSFGILIMEVIS-GRNPVDYSRPPGEVN 400
DV+SFGIL+ E+++ GR P PG N
Sbjct: 187 DVWSFGILLTEIVTHGRIPY-----PGMTN 211
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 100
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 101 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 154
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 265
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 266 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 298
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 93
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 94 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 147
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 258
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 259 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 133/280 (47%), Gaps = 34/280 (12%)
Query: 193 VIGEGGYGIVYHGVLEDN----TNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG G +G VYHG L DN + AVK+L + + G+ +F E + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS-QFLTEGIIMKDFSHPNVLS 95
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
LLG C +EG+ ++V Y+ +G+L ++ + H+P ++ + L AKG+ +L
Sbjct: 96 LLGICLRSEGS-PLVVLPYMKHGDLRNFIRNET--HNPTVKDL-IGFGLQVAKGMKFL-- 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERSYVTTRVMGTF--GYVAPEY 361
K VHRD+ + N +LD+++ K++DFGLA+ + E V + ++A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
T +SDV+SFG+L+ E+++ P P +VN + ++ R +L P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRR---LLQPE 260
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
P C P A RP ++ + A
Sbjct: 261 YCPDP-------LYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 194 IGEGGYGIVYHGVL---EDNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNLVRLLG 249
+G G +G V GV + +VA+K L +A+ +E E + + ++ + +VRL+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
C A MLV E G L ++L VG + ++ + G+ YL E
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEE---KN 130
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGML 367
VHRD+ + N+LL + K+SDFGL+K LGA+ SY T R G + + APE +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 368 NERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTM 408
+ RSDV+S+G+ + E +S G+ P + P + +E K M
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 232
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 133/286 (46%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + + ++F E +
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M+V EY++NG+L+ +L + G + + + ++ G +
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL---VGMLRGIS 134
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 135 AGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 191
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ APE + SDV+S+GI++ EV+S RP E+ + +K +
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE-----RPYWEMTNQDVIKAV-----E 241
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
EG P + P + C + RPK +++ML+
Sbjct: 242 EGYRLPSPMDCPAA-----LYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 194 IGEGGYGIVYHGVL---EDNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNLVRLLG 249
+G G +G V GV + +VA+K L +A+ +E E + + ++ + +VRL+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
C A MLV E G L ++L VG + ++ + G+ YL E
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEK---N 456
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGML 367
VHR++ + N+LL + K+SDFGL+K LGA+ SY T R G + + APE +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 368 NERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTM 408
+ RSDV+S+G+ + E +S G+ P + P + +E K M
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM 558
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 26/273 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIR--MNIILGTAKGLTYLHEGLEPKVV 311
+V ++ + +L LH S +E++ ++I TA+G+ YLH ++
Sbjct: 92 -PQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPE---YASTGML 367
HRD+KS+NI L + K+ DFGLA S+ ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 368 NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPC 427
+ +SDVY+FGI++ E+++G+ P YS ++E + G L P L K
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIEMV--------GRGSLSPDL-SKVR 251
Query: 428 SXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
S C+ +RP ++ +E
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 26/273 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 90
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIR--MNIILGTAKGLTYLHEGLEPKVV 311
+V ++ + +L LH S +E++ ++I TA+G+ YLH ++
Sbjct: 91 APQLAIVTQWCEGSSLYHHLHA-----SETKFEMKKLIDIARQTARGMDYLH---AKSII 142
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPE---YASTGML 367
HRD+KS+NI L + K+ DFGLA S+ ++ G+ ++APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 368 NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPC 427
+ +SDVY+FGI++ E+++G+ P YS ++E + G L P L K
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLP--YSNINNRDQIIEMV--------GRGSLSPDL-SKVR 251
Query: 428 SXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
S C+ +RP ++ +E
Sbjct: 252 SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEK-EFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + + ++ +F E +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 88
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M++ E+++NG+L+ +L + G + + + ++ G A
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL---VGMLRGIA 145
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT-TRVMG--- 352
G+ YL + VHRD+ + NIL++ K+SDFGL++ L + S T T +G
Sbjct: 146 AGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 202
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTN 411
+ APE SDV+S+GI++ EV+S G P W +TN
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W---DMTN 246
Query: 412 RNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
++ ++ + P C + + RPK G +++ L+
Sbjct: 247 QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGLA++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 108/199 (54%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G +T VAVK+L + F E + +++H+ LVRL +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY++NG+L +L G LT +++ A+G+ ++ E +HR
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIHR 129
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
+++++NIL+ + K++DFGLA+L+ E + T R F + APE + G +S
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 188 DVWSFGILLTEIVTHGRIP 206
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 14/216 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + E VIG G +G V G L+ + VA+K L + + ++F E +
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N+V L G G M+V E+++NG L+ +L G + + + ++ G A
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL---VGMLRGIA 155
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL++++ E Y TT
Sbjct: 156 AGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV 212
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ APE SDV+S+GI++ EV+S G P
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 15/213 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEK-EFKVEVEAI 236
E+ + E VIG G +G V G L+ + VA+K L + ++ EF E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIM 71
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G M++ E+++NG L+ +L + G + + + ++ G A
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIA 128
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT-TRVMG--- 352
G+ YL E VHRD+ + NIL++ K+SDFGL++ L S T T +G
Sbjct: 129 SGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI 185
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ APE + SD +S+GI++ EV+S
Sbjct: 186 PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + ++F E +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M++ EY++NG+L+ +L + G + + + ++ G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIG 141
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFG++++L E +Y T
Sbjct: 142 SGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ APE + SDV+S+GI++ EV+S RP +++ + +K +
Sbjct: 199 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-----RPYWDMSNQDVIKAI-----E 248
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
EG P + P + C RPK G +++ML+
Sbjct: 249 EGYRLPPPMDCPIA-----LHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + ++F E +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M++ EY++NG+L+ +L + G + + + ++ G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIG 120
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFG++++L E +Y T
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ APE + SDV+S+GI++ EV+S RP +++ + +K +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-----RPYWDMSNQDVIKAI-----E 227
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
EG P + P + C RPK G +++ML+
Sbjct: 228 EGYRLPPPMDCPIA-----LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G+V G + +VAVK ++ +E EF E + + ++ H LV+ G C++
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 254 GAHRMLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+V EYI NG L +L HG S L + + +G+ +L + +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH---QFI 126
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+D+ K+SDFG+ + + ++ + + APE + +S
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 372 DVYSFGILIMEVIS-GRNPVD 391
DV++FGIL+ EV S G+ P D
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + ++F E +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M++ EY++NG+L+ +L + G + + + ++ G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIG 126
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFG++++L E +Y T
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ APE + SDV+S+GI++ EV+S RP +++ + +K +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE-----RPYWDMSNQDVIKAI-----E 233
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
EG P + P + C RPK G +++ML+
Sbjct: 234 EGYRLPPPMDCPIA-----LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 194 IGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V+ +D VAVK L + A K+F E E + ++H+++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWL--HG-------DVGPHSPLTWEIRMNIILGTAKG 298
G C EG ++V+EY+ +G+L ++L HG + P + LT ++I A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYV 357
+ YL VHRD+ + N L+ + K+ DFG+++ + + Y V M ++
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
PE SDV+S G+++ E+ + G+ P
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ---LVGMLRGIA 128
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 230
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 231 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 155
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 156 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 212
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 257
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 258 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 145
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 146 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 202
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 247
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 248 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGR 238
+ E NG D V+G+G YGIVY G L + +A+K + + + E+
Sbjct: 18 DYEYDENG--DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP--HSPLTWEIRMNIILGTA 296
++HKN+V+ LG +E + E + G+L L GP + T IL
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL--- 132
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFG 355
+GL YLH+ ++VHRDIK N+L++ K+SDFG +K L A + T GT
Sbjct: 133 EGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQ 188
Query: 356 YVAPEYASTGM--LNERSDVYSFGILIMEVISGRNP 389
Y+APE G + +D++S G I+E+ +G+ P
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGR 238
+ E NG D V+G+G YGIVY G L + +A+K + + + E+
Sbjct: 4 DYEYDENG--DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP--HSPLTWEIRMNIILGTA 296
++HKN+V+ LG +E + E + G+L L GP + T IL
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL--- 118
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFG 355
+GL YLH+ ++VHRDIK N+L++ K+SDFG +K L A + T GT
Sbjct: 119 EGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQ 174
Query: 356 YVAPEYASTGM--LNERSDVYSFGILIMEVISGRNP 389
Y+APE G + +D++S G I+E+ +G+ P
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 12/211 (5%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G G +G V+ +T VAVK + E F E + ++H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
LV+L + ++ E++ G+L +L D G PL I + + A+G+ +
Sbjct: 70 DKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAF 126
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ + +HRD++++NIL+ K++DFGLA+++ E + T R F + AP
Sbjct: 127 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 181
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
E + G +SDV+SFGIL+ME+++ GR P
Sbjct: 182 EAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V EY++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL ++L E +Y T
Sbjct: 158 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G ++T VAVK L + + F E + ++H LVRL
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ EY+ G+L +L D G L I + + A+G+ Y+ +HR
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIERK---NYIHR 134
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++N+L+ + K++DFGLA+++ E + T R F + APE + G +S
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 372 DVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXX 430
DV+SFGIL+ E+++ G+ P PG N V ++G PR++ P
Sbjct: 193 DVWSFGILLYEIVTYGKIPY-----PGRTN------ADVMTALSQGYRMPRVENCP---- 237
Query: 431 XXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
C A +RP ++ +L+
Sbjct: 238 -DELYDIMKMCWKEKAEERPTFDYLQSVLD 266
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEA 235
+L + E+ ++ +G G YG VY GV + + VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++H NLV+LLG C ++ E++ GNL +L E+ ++L
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL------RECNRQEVSAVVLLYM 114
Query: 296 AKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF 354
A ++ E LE K +HRD+ + N L+ + K++DFGL++L+ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVE 403
+ APE + + +SDV++FG+L+ E+ + G +P P L+E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 12/211 (5%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G G +G V+ +T VAVK + E F E + ++H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 242
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
LV+L + ++ E++ G+L +L D G PL I + + A+G+ +
Sbjct: 243 DKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAF 299
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAP 359
+ + +HRD++++NIL+ K++DFGLA+++ E + T R F + AP
Sbjct: 300 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 354
Query: 360 EYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
E + G +SDV+SFGIL+ME+++ GR P
Sbjct: 355 EAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 21/211 (9%)
Query: 192 NVIGEGGYGIVYHG--VLEDNT---NVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLV 245
V+G G +G VY G V E T VA+K L G +A EF E + + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLH---GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
RLLG C + LV + + +G L +++H ++G L W +++ AKG+ YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL-GAERSYVTTRVMGTFGYVAPEY 361
E ++VHRD+ + N+L+ + K++DFGLA+LL G E+ Y ++A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
+SDV+S+G+ I E+++ G P D
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 103 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 155
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 216 QSDVYAFGIVLYELMTGQLP 235
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 21/211 (9%)
Query: 192 NVIGEGGYGIVYHG--VLEDNT---NVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLV 245
V+G G +G VY G V E T VA+K L G +A EF E + + H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLH---GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
RLLG C + LV + + +G L +++H ++G L W +++ AKG+ YL
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 133
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL-GAERSYVTTRVMGTFGYVAPEY 361
E ++VHRD+ + N+L+ + K++DFGLA+LL G E+ Y ++A E
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
+SDV+S+G+ I E+++ G P D
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEA 235
+L + E+ ++ +G G YG VY GV + + VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++H NLV+LLG C ++ E++ GNL +L E+ ++L
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYM 114
Query: 296 AKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF 354
A ++ E LE K +HRD+ + N L+ + K++DFGL++L+ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVE 403
+ APE + + +SDV++FG+L+ E+ + G +P P L+E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 78 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 130
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 191 QSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 156
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 81 -PQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 194 QSDVYAFGIVLYELMTGQLP 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 75 APQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 128
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 128
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA + S+ ++ G+ ++APE N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 189 QSDVYAFGIVLYELMTGQLP 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 32/289 (11%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEK-EFKVEVEAI 236
E+ + E VIG G +G V G L+ VA+K L + + ++ +F E +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 62
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++ L G + M++ E+++NG+L+ +L + G + + + ++ G A
Sbjct: 63 GQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL---VGMLRGIA 119
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT-TRVMG--- 352
G+ YL + VHR + + NIL++ K+SDFGL++ L + S T T +G
Sbjct: 120 AGMKYLADM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI 176
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTN 411
+ APE SDV+S+GI++ EV+S G P W +TN
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------W---DMTN 220
Query: 412 RNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
++ ++ + P C + + RPK G +++ L+
Sbjct: 221 QDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 195 DVWAFGVLLWEIATYGMSP 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 81 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 195 DVWAFGVLLWEIATYGMSP 213
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNN-RGQAEKEFK 230
L+E+ +S F +E +GE +G VY G L E VA+K L + G +EF+
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 231 VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL-----HGDVGP------ 279
E R++H N+V LLG + +++ Y +G+L ++L H DVG
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 280 -HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
S L ++++ A G+ YL VVH+D+ + N+L+ + N K+SD GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 339 LGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ A Y + + ++APE G + SD++S+G+++ EV S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G NT VA+K L E F E + + +++H LV+L +E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V EY++ G+L +L G L +++ A G+ Y+ +HR
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHR 129
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++S+NIL+ K++DFGLA+L+ E + T R F + APE A G +S
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV+SFGIL+ E+++ GR P
Sbjct: 188 DVWSFGILLTELVTKGRVP 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 112/230 (48%), Gaps = 10/230 (4%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEA 235
+L + E+ ++ +G G +G VY GV + + VAVK L + + E EF E
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 60
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++H NLV+LLG C ++ E++ GNL +L E+ ++L
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYM 114
Query: 296 AKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF 354
A ++ E LE K +HRD+ + N L+ + K++DFGL++L+ +
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVE 403
+ APE + + +SDV++FG+L+ E+ + G +P P L+E
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 84 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 198 DVWAFGVLLWEIATYGMSP 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 14/216 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V E ++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ +PE + SDV+S+GI++ EV+S G P
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 199 DVWAFGVLLWEIATYGMSP 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNN-RGQAEKEFK 230
L+E+ +S F +E +GE +G VY G L E VA+K L + G +EF+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 231 VEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL-----HGDVGP------ 279
E R++H N+V LLG + +++ Y +G+L ++L H DVG
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 280 -HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
S L ++++ A G+ YL VVH+D+ + N+L+ + N K+SD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 339 LGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ A Y + + ++APE G + SD++S+G+++ EV S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 196 DVWAFGVLLWEIATYGMSP 214
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 194 DVWAFGVLLWEIATYGMSP 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 93 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRD+ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 207 DVWAFGVLLWEIATYGMSP 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 190
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 250
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVE 232
++ ++ + E+ ++ +G G YG VY GV + + VAVK L + + E EF E
Sbjct: 20 YFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 78
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNII 292
+ ++H NLV+LLG C +V EY+ GNL +L E+ ++
Sbjct: 79 AAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE------EVTAVVL 132
Query: 293 LGTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
L A ++ E LE K +HRD+ + N L+ + K++DFGL++L+ +
Sbjct: 133 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK 192
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ APE + + +SDV++FG+L+ E+ + G +P
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 104 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 156
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA S+ ++ G+ ++APE N
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 217 QSDVYAFGIVLYELMTGQLP 236
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V E ++NG+L+ +L + + + ++ G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 157
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 158 SGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 214
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 259
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 260 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 96 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 148
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNE--- 369
D+KS+NI L + K+ DFGLA S+ ++ G+ ++APE N
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 209 QSDVYAFGIVLYELMTGQLP 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 130/286 (45%), Gaps = 28/286 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNL-LNNRGQAEKEFKVEVEAI 236
E+ + + V+G G +G V G L+ +VA+K L + + ++F E +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
G+ H N++RL G + M+V E ++NG+L+ +L + + + ++ G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIA 128
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTF 354
G+ YL + VHRD+ + NIL++ K+SDFGL+++L E +Y T
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPI 185
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA 414
+ +PE + SDV+S+GI++ EV+S RP E ++N++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWE----------MSNQDV 230
Query: 415 EGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
+D + P C + + RPK ++ +L+
Sbjct: 231 IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 27/270 (10%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G V+ G ++T VAVK L + + F E + ++H LVRL +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ E++ G+L +L D G L I + + A+G+ Y+ +HR
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIER---KNYIHR 133
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNERS 371
D++++N+L+ + K++DFGLA+++ E + T R F + APE + G +S
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 372 DVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXX 430
+V+SFGIL+ E+++ G+ P PG N V + ++G PR++ P
Sbjct: 192 NVWSFGILLYEIVTYGKIPY-----PGRTN------ADVMSALSQGYRMPRMENCP---- 236
Query: 431 XXXXXXXXXXCVDPNAHKRPKMGHVIHMLE 460
C A +RP ++ +L+
Sbjct: 237 -DELYDIMKMCWKEKAEERPTFDYLQSVLD 265
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 19/204 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + N+ Q + FK EV + + RH N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V ++ + +L LH + ++I TA+G+ YLH ++HR
Sbjct: 76 -PQLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLH---AKSIIHR 128
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAER-----SYVTTRVMGTFGYVAPEYASTGMLN 368
D+KS+NI L + K+ DFGLA E+ S+ ++ G+ ++APE N
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 369 E---RSDVYSFGILIMEVISGRNP 389
+SDVY+FGI++ E+++G+ P
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + + G F Y APE
Sbjct: 133 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APES 188
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGEV 399
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 224
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 164 TPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG 223
P + LG+G W E++ F E +G G +G+V +G +VA+K ++
Sbjct: 8 APSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGS 60
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+E EF E + + + H+ LV+L G C + ++ EY+ NG L +L +
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-------EM 113
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
+ +L K + E LE K +HRD+ + N L++ Q K+SDFGL++ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
+ + PE + +SD+++FG+L+ E+ S G+ P +
Sbjct: 174 EETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 34/283 (12%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAV-KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
V+G+G +G + V V K L+ + ++ F EV+ + + H N+++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+ + EYI G L + S W R++ A G+ YLH ++
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKS---MDSQYPWSQRVSFAKDIASGMAYLHSM---NII 130
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT-------------TRVMGTFGYVA 358
HRD+ S N L+ + N ++DFGLA+L+ E++ V+G ++A
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA 190
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL 418
PE + +E+ DV+SFGI++ E+I GR D P +TM N G L
Sbjct: 191 PEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLP---------RTMDFGLNVRGFL 240
Query: 419 DPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEA 461
D R C C D + KRP + H LE
Sbjct: 241 D-RYCPPNCP---PSFFPITVRCCDLDPEKRPSFVKLEHWLET 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 188 FADENVIGEGGYGIVY-----HGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHK 242
F N++G+G + VY H LE + K + G ++ + EV+ +++H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKHP 71
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
+++ L Y + + LV E NG + ++L V P S M+ I+ G+ YL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII---TGMLYL 128
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA--ERSYVTTRVMGTFGYVAPE 360
H ++HRD+ SN+LL + N K++DFGLA L E+ Y + GT Y++PE
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT---LCGTPNYISPE 182
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLV 402
A+ SDV+S G + ++ GR P D +N V
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 164 TPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG 223
P + LG+G W E++ F E +G G +G+V +G +VA+K ++
Sbjct: 8 APSTAGLGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGS 60
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
+E EF E + + + H+ LV+L G C + ++ EY+ NG L +L +
Sbjct: 61 MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-------EM 113
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
+ +L K + E LE K +HRD+ + N L++ Q K+SDFGL++ + +
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
Query: 343 RSYVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
T+ V F + PE + +SD+++FG+L+ E+ S G+ P +
Sbjct: 174 E--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 223
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 24/266 (9%)
Query: 168 SHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRG 223
SH+ + L + E+ +G+G +G VY + + + A+K L +
Sbjct: 2 SHMSKKRQWALEDFEIG-------RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 54
Query: 224 QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPL 283
E + + EVE +RH N++RL GY + L+ EY G + + ++ S
Sbjct: 55 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKF 110
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+ I A L+Y H +V+HRDIK N+LL K++DFG + + R
Sbjct: 111 DEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167
Query: 344 SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD---YSRPPGEVN 400
T + GT Y+ PE M +E+ D++S G+L E + G+ P + Y ++
Sbjct: 168 R---TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 401 LVEWLKTMVTNRNAEGVLDPRLQEKP 426
VE+ A ++ L+ P
Sbjct: 225 RVEFTFPDFVTEGARDLISRLLKHNP 250
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 123
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEK---EFKVEVEAIGRVRHKNLVRLL 248
++G GG V+ L D+ +VAVK L + + F+ E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 249 ----GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G +V EY+D L +H + P+T + + +I + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQ 134
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPEYA 362
++HRD+K +NIL+ K+ DFG+A+ + + V T V+GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
++ RSDVYS G ++ EV++G P P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 145
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 202
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 203 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 154
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 211
Query: 370 RSDVYSFGILIMEVISGRNPVD 391
+ D++S G+L E + G+ P +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFE 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 190
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 250
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 326 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HR++ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 440 DVWAFGVLLWEIATYGMSP 458
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDE 186
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 246
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 287 REPPFYIITEFMTYGNLLDYL------RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HR++ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 401 DVWAFGVLLWEIATYGMSP 419
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 133
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HR++ + NIL++ + K+ DFGL K+L ++ Y + G F Y APE
Sbjct: 134 ---KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APES 189
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGEV 399
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 225
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 127
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 184
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 185 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 244
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEK---EFKVEVEAIGRVRHKNLVRLL 248
++G GG V+ L D+ +VAVK L + + F+ E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 249 ----GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G +V EY+D L +H + P+T + + +I + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQ 134
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYA 362
++HRD+K +NI++ K+ DFG+A+ + + VT V+GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
++ RSDVYS G ++ EV++G P P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEK---EFKVEVEAIGRVRHKNLVRLL 248
++G GG V+ L D+ +VAVK L + + F+ E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 249 ----GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G +V EY+D L +H + P+T + + +I + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQ 134
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYA 362
++HRD+K +NI++ K+ DFG+A+ + + VT V+GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
++ RSDVYS G ++ EV++G P P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG YG V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYLPPEMIEGRMHDE 186
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 246
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEYLGT 135
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 136 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 226
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNT-NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G YG VY GV + + VAVK L + + E EF E + ++H NLV+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VV 311
++ E++ GNL +L E+ ++L A ++ E LE K +
Sbjct: 284 REPPFYIITEFMTYGNLLDYL------RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HR++ + N L+ + K++DFGL++L+ + + APE + + +S
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 372 DVYSFGILIMEVIS-GRNP 389
DV++FG+L+ E+ + G +P
Sbjct: 398 DVWAFGVLLWEIATYGMSP 416
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 132
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 189
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 190 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 249
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH 241
E+ E +G G +G V+ +T VAVK + E F E + ++H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 236
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
LV+L + ++ E++ G+L +L D G PL I + + A+G+ +
Sbjct: 237 DKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI--AEGMAF 293
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
+ + +HRD++++NIL+ K++DFGLA++ GA+ + APE
Sbjct: 294 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARV-GAK---------FPIKWTAPEA 340
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ G +SDV+SFGIL+ME+++ GR P
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G ++ ++ S + I A L+Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXGTLDYLPPEMIEGRMHDE 190
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 250
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + A+K L + E + + EVE +RH N++RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 125
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 182
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 183 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 242
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 26/235 (11%)
Query: 194 IGEGGYG---IVYHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G + + L DNT VAVK L ++ +++F+ E++ + + +V+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 249 GYCAEGAHRM---LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGLTYLHE 304
G + G R LV EY+ +G L +L H R+ + KG+ YL
Sbjct: 78 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGS 132
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGYVAPEYA 362
+ VHRD+ + NIL++ + + K++DFGLAKLL ++ Y R G + APE
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
S + + +SDV+SFG+++ E+ + D S P E+L+ M + R+ +
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFTY---CDKSCSPS----AEFLRMMGSERDVPAL 237
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 136
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 192
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 131
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 187
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 222
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 25/219 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 137
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 138 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 193
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGEV 399
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 138
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 139 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 194
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 11/200 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG G +G VY G + V + +++ + + F+ EV + + RH N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+ +V ++ + +L + LH + ++I TA+G+ YLH ++HR
Sbjct: 104 D-NLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHR 156
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPE---YASTGMLNE 369
D+KS+NI L + K+ DFGLA + S + G+ ++APE +
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 370 RSDVYSFGILIMEVISGRNP 389
+SDVYS+GI++ E+++G P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 135
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 136 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 26/235 (11%)
Query: 194 IGEGGYG---IVYHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G + + L DNT VAVK L ++ +++F+ E++ + + +V+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 249 GYCAEGAHRM---LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGLTYLHE 304
G + G R LV EY+ +G L +L H R+ + KG+ YL
Sbjct: 79 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGS 133
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGYVAPEYA 362
+ VHRD+ + NIL++ + + K++DFGLAKLL ++ Y R G + APE
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
S + + +SDV+SFG+++ E+ + D S P E+L+ M R+ +
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFTY---CDKSCSPS----AEFLRMMGCERDVPAL 238
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 188
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 130
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 186
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 221
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 139
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 140 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 195
Query: 362 ASTGMLNERSDVYSFGILIMEVIS 385
+ + SDV+SFG+++ E+ +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 112/219 (51%), Gaps = 25/219 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 163
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 164 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 219
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGEV 399
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 255
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 132
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 133 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 188
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 223
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ E++ G+L ++L H + H L + KG+ YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 135
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGEV 399
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 26/235 (11%)
Query: 194 IGEGGYG---IVYHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G + + L DNT VAVK L ++ +++F+ E++ + + +V+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 249 GYCAEGAHRM---LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGLTYLHE 304
G + G R LV EY+ +G L +L H R+ + KG+ YL
Sbjct: 91 GV-SYGPGRQSLRLVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGS 145
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGYVAPEYA 362
+ VHRD+ + NIL++ + + K++DFGLAKLL ++ Y R G + APE
Sbjct: 146 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
S + + +SDV+SFG+++ E+ + D S P E+L+ M R+ +
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFTY---CDKSCSPS----AEFLRMMGCERDVPAL 250
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTN--VAVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G VY E N+ +A+K L + E + + EVE +RH N++RL
Sbjct: 16 LGKGKFGNVYLAR-EKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
GY + L+ EY G + + ++ S + I A L+Y H
Sbjct: 75 GYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK--- 127
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN 368
KV+HRDIK N+LL K++DFG + + R + GT Y+ PE M +
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHD 184
Query: 369 ERSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK 425
E+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 426 P 426
P
Sbjct: 245 P 245
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 151 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 206
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 241
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 25/218 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G V + L+DNT VAVK L ++ + ++F+ E+E + ++H N+V+
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C R L+ EY+ G+L +L H + H L + KG+ YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGT 150
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+ +HRD+ + NIL++ + K+ DFGL K+L ++ + G F Y APE
Sbjct: 151 ---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 206
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR-PPGE 398
+ + SDV+SFG+++ E+ + ++ S+ PP E
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAE 241
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 194 IGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V+ +D VAVK L + A K+F+ E E + ++H+++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWL--HG-------DVGPHSP---LTWEIRMNIILGT 295
G C +G ++V+EY+ +G+L ++L HG D P L ++I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTF 354
A G+ YL VHRD+ + N L+ K+ DFG+++ + + Y V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++ PE SDV+SFG+++ E+ + G+ P
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K+++FG + + R T + GT Y+ PE M +E
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 187
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 247
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 130
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDE 187
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 188 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 129
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DTLCGTLDYLPPEMIEGRMHDE 186
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 246
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 111/226 (49%), Gaps = 20/226 (8%)
Query: 170 LGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF 229
LG+G W E++ F E +G G +G+V +G +VA+K ++ +E EF
Sbjct: 5 LGYGSW----EIDPKDLTFLKE--LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF 57
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
E + + + H+ LV+L G C + ++ EY+ NG L +L + +
Sbjct: 58 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR-------EMRHRFQT 110
Query: 290 NIILGTAKGLTYLHEGLEPK-VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
+L K + E LE K +HRD+ + N L++ Q K+SDFGL++ + + T+
Sbjct: 111 QQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTS 168
Query: 349 RVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
V F + PE + +SD+++FG+L+ E+ S G+ P +
Sbjct: 169 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 154
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPPEMIEGRMHDE 211
Query: 370 RSDVYSFGILIMEVISGRNPVD 391
+ D++S G+L E + G+ P +
Sbjct: 212 KVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K+++FG + + R T + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G ++ ++ S + I A L+Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCHSK---R 133
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE +E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEXIEGRXHDE 190
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 250
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPPEMIEGRMHDE 185
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
V H ++R+ G + ++ +YI+ G L L +P+ + L
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA---- 118
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
L YLH +++RD+K NILLDK + K++DFG AK + VT + GT Y+A
Sbjct: 119 LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIA 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
PE ST N+ D +SFGILI E+++G P
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
IGEG GIV E +T VAVK + + Q + EV + H N+V +
Sbjct: 53 IGEGSTGIVCIAT-EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V E+++ G L D+ H+ + E + L + L+YLH V+
Sbjct: 112 LVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVI 163
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNE 369
HRDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE---VPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 370 RSDVYSFGILIMEVISGRNPVDYSRPP 396
D++S GI+++E+I G P ++ PP
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPY-FNEPP 246
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 11/204 (5%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG G V V VAVK + R + K E+ + H+N+V+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ EG + L EY G L + D+G P ++ G+ YLH G+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM----AGVVYLH-GI--G 124
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLN 368
+ HRDIK N+LLD++ N K+SDFGLA + R + ++ GT YVAPE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 369 -ERSDVYSFGILIMEVISGRNPVD 391
E DV+S GI++ +++G P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 17/240 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + + A+K L + E + + EVE +RH N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITELANALSYCHSK---R 131
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPPEMIEGRMHDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD---YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+ D++S G+L E + G+ P + Y ++ VE+ A ++ L+ P
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 219 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 270
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 327
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 368
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 38/254 (14%)
Query: 149 GSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVL- 207
GSH SG+ A + L+E E F V+G G +G VY G+
Sbjct: 1 GSHMASGEAPNQALLR------------ILKETE-----FKKIKVLGSGAFGTVYKGLWI 43
Query: 208 ----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE 262
+ VA+K L +A KE E + V + ++ RLLG C + L+ +
Sbjct: 44 PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQ 102
Query: 263 YIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSN 319
+ G L ++ H D +G L W +++ AKG+ YL + ++VHRD+ + N
Sbjct: 103 LMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARN 153
Query: 320 ILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 378
+L+ + K++DFGLAKLLGA E+ Y ++A E + +SDV+S+G+
Sbjct: 154 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGV 213
Query: 379 LIMEVIS-GRNPVD 391
+ E+++ G P D
Sbjct: 214 TVWELMTFGSKPYD 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 97 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 148
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 205
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 206 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 246
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 99 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 150
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 207
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 208 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 248
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + A+K L + E + + EVE +RH N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G + + ++ S + I A L+Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALSYCHSK---R 132
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R T + GT Y+ PE M +E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEMIEGRMHDE 189
Query: 370 RSDVYSFGILIMEVISGRNPVD 391
+ D++S G+L E + G P +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 92 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 143
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 200
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 201 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 241
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 194 IGEGGYGIVYH----GVL--EDNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVR 246
IGEG +G V+ G+L E T VAVK L + +F+ E + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS---------------------PLTW 285
LLG CA G L++EY+ G+L ++L + PH+ PL+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRS-MSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERS 344
++ I A G+ YL E K VHRD+ + N L+ + K++DFGL++ + A+
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++ PE SDV+++G+++ E+ S
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 88 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 139
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 196
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 197 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 237
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 26/233 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + + ++ R Q +E EV + +H+N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G +V E+++ G L D+ H+ + E + L + L+ LH V+H
Sbjct: 142 VGDELWVVMEFLEGGALT-----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIH 193
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + E V R ++GT ++APE S
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKE---VPRRKXLVGTPYWMAPELISRLPYGPE 250
Query: 371 SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ 423
D++S GI+++E++ G P ++ PP LK M R+ L PRL+
Sbjct: 251 VDIWSLGIMVIEMVDGEPPY-FNEPP--------LKAMKMIRDN---LPPRLK 291
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 109/229 (47%), Gaps = 23/229 (10%)
Query: 170 LGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF 229
LG G ++EL++ IG+G +G V G N VAVK + N+ + F
Sbjct: 3 LGSGWALNMKELKLL-------QTIGKGEFGDVMLGDYRGN-KVAVKCIKND--ATAQAF 52
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIR 288
E + ++RH NLV+LLG E + +V EY+ G+L +L S L +
Sbjct: 53 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCL 110
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
+ L + + YL EG VHRD+ + N+L+ + K+SDFGL K E S
Sbjct: 111 LKFSLDVCEAMEYL-EG--NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQD 163
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPP 396
+ APE + +SDV+SFGIL+ E+ S GR P Y R P
Sbjct: 164 TGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP--YPRIP 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEK---EFKVEVEAIGRVRHKNLVRLL 248
++G GG V+ L + +VAVK L + + F+ E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 249 GY----CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G +V EY+D L +H + P+T + + +I + L + H+
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQ 134
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYA 362
++HRD+K +NI++ K+ DFG+A+ + + VT V+GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
++ RSDVYS G ++ EV++G P P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 155 GDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVL------E 208
G+ + A++ PE + Y E EV+ +G+G +G+VY GV E
Sbjct: 18 GNGVLYASVNPE--YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDE 75
Query: 209 DNTNVAVKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNG 267
T VA+K + E+ EF E + ++VRLLG ++G +++ E + G
Sbjct: 76 PETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 268 NLEQWLHGDVGPH-------SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
+L+ +L + P +P + + + A G+ YL+ K VHRD+ + N
Sbjct: 136 DLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC 191
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGI 378
++ + + K+ DFG+ + + E Y G +++PE G+ SDV+SFG+
Sbjct: 192 MVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGV 250
Query: 379 LIMEVIS 385
++ E+ +
Sbjct: 251 VLWEIAT 257
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 24/234 (10%)
Query: 194 IGEGGYG---IVYHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+G +G + + L DNT VAVK L ++ +++F+ E++ + + +V+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 249 G--YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG-TAKGLTYLHEG 305
G Y LV EY+ +G L +L H R+ + KG+ YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGYVAPEYAS 363
+ VHRD+ + NIL++ + + K++DFGLAKLL ++ R G + APE S
Sbjct: 131 ---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
+ + +SDV+SFG+++ E+ + D S P E+L+ M R+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFTY---CDKSCSPS----AEFLRMMGCERDVPAL 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 17/213 (7%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEK---EFKVEVEAIGRVRHKNLVRLL 248
++G GG V+ L + +VAVK L + + F+ E + + H +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 249 ----GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G +V EY+D L +H + P+T + + +I + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQ 134
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYA 362
++HRD+K +NI++ K+ DFG+A+ + + VT V+GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
++ RSDVYS G ++ EV++G P P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 8/204 (3%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLN--NRGQAEKEFKV-EVEAIGRVRHKNLVRLLG 249
IG G YG + + + V L+ + +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCAEGAHRML--VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ + L V EY + G+L + L E + ++ L H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG 365
V+HRD+K +N+ LD + N KL DFGLA++L + S+ T V GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRM 191
Query: 366 MLNERSDVYSFGILIMEVISGRNP 389
NE+SD++S G L+ E+ + P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
IG+G +G V+ G+ DN VA+K + L ++ + E+ + + + + G
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+G+ ++ EY+ G+ L GP + IL KGL YLH K
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEIL---KGLDYLHS---EK 140
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
+HRDIK++N+LL +Q + KL+DFG+A L + T V GT ++APE +
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDS 199
Query: 370 RSDVYSFGILIMEVISGRNP 389
++D++S GI +E+ G P
Sbjct: 200 KADIWSLGITAIELAKGEPP 219
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS 318
+V EY+D L +H + P+T + + +I + L + H+ ++HRD+K +
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 319 NILLDKQWNPKLSDFGLAKLLGAERSYVT--TRVMGTFGYVAPEYASTGMLNERSDVYSF 376
NI++ K+ DFG+A+ + + VT V+GT Y++PE A ++ RSDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 377 GILIMEVISGRNPVDYSRP 395
G ++ EV++G P P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 161 AAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVA 214
A++ PE + Y E EV+ +G+G +G+VY GV E T VA
Sbjct: 2 ASVNPE--YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVA 59
Query: 215 VKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL 273
+K + E+ EF E + ++VRLLG ++G +++ E + G+L+ +L
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 274 HGDVGPH-------SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW 326
+ P +P + + + A G+ YL+ K VHRD+ + N ++ + +
Sbjct: 120 RS-LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175
Query: 327 NPKLSDFGLAKLLGAERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVI 384
K+ DFG+ + + E Y G +++PE G+ SDV+SFG+++ E+
Sbjct: 176 TVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 385 S 385
+
Sbjct: 235 T 235
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ A+G
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL-GAERSYVTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLL--NNRGQAEKEFKVEVEAIGRVR 240
S + + ++GEG YG+V +D VA+K L ++ +K E++ + ++R
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H+NLV LL C + LV+E++D+ L+ ++ P+ L +++ + G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDL---ELFPNG-LDYQVVQKYLFQIINGIG 138
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+ H ++HRDIK NIL+ + KL DFG A+ L A V T Y APE
Sbjct: 139 FCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPE 194
Query: 361 YASTGMLNERS-DVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD 419
+ ++ DV++ G L+ E+ G PG+ ++ + M+ N L
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF-----PGDSDIDQLYHIMMCLGN----LI 245
Query: 420 PRLQE 424
PR QE
Sbjct: 246 PRHQE 250
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
IG+G +G V G N VAVK + N+ + F E + ++RH NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDYRGN-KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 252 AEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + +V EY+ G+L +L S L + + L + + YL EG
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNF 138
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNER 370
VHRD+ + N+L+ + K+SDFGL K E S + APE + +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 371 SDVYSFGILIMEVIS-GRNPVDYSRPP 396
SDV+SFGIL+ E+ S GR P Y R P
Sbjct: 195 SDVWSFGILLWEIYSFGRVP--YPRIP 219
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL-GAERSYVTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G+V +G +VA+K ++ +E EF E + + + H+ LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VVH 312
++ EY+ NG L +L + + +L K + E LE K +H
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 127
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNER 370
RD+ + N L++ Q K+SDFGL++ + + T+ V F + PE + +
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 185
Query: 371 SDVYSFGILIMEVIS-GRNPVD 391
SD+++FG+L+ E+ S G+ P +
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYE 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 161 AAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVA 214
A++ PE + Y E EV+ +G+G +G+VY GV E T VA
Sbjct: 2 ASVNPE--YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVA 59
Query: 215 VKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL 273
+K + E+ EF E + ++VRLLG ++G +++ E + G+L+ +L
Sbjct: 60 IKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
Query: 274 HGDVGPH-------SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW 326
+ P +P + + + A G+ YL+ K VHRD+ + N ++ + +
Sbjct: 120 RS-LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175
Query: 327 NPKLSDFGLAKLLGAERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVI 384
K+ DFG+ + + E Y G +++PE G+ SDV+SFG+++ E+
Sbjct: 176 TVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 385 S 385
+
Sbjct: 235 T 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVK----NLLNNRGQAEKEFKVEVEAIGRV 239
S++ F +G G Y VY G L T V V L + G + E+ + +
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKEL 60
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG--TAK 297
+H+N+VRL LV+E++DN +L++++ ++P E+ + +
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
GL + HE K++HRD+K N+L++K+ KL DFGLA+ G + ++ V+ T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 358 APEYASTGMLNERS-DVYSFGILIMEVISGR 387
AP+ S D++S G ++ E+I+G+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G+V +G +VA+K ++ +E EF E + + + H+ LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VVH 312
++ EY+ NG L +L + + +L K + E LE K +H
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNER 370
RD+ + N L++ Q K+SDFGL++ + + T+ V F + PE + +
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 181
Query: 371 SDVYSFGILIMEVIS-GRNPVD 391
SD+++FG+L+ E+ S G+ P +
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
IG+G +G V G N VAVK + N+ + F E + ++RH NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDYRGN-KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 252 AEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + +V EY+ G+L +L S L + + L + + YL EG
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNF 123
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNER 370
VHRD+ + N+L+ + K+SDFGL K E S + APE + +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 371 SDVYSFGILIMEVIS-GRNPVDYSRPP 396
SDV+SFGIL+ E+ S GR P Y R P
Sbjct: 180 SDVWSFGILLWEIYSFGRVP--YPRIP 204
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
IG+G +G V G N VAVK + N+ + F E + ++RH NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDYRGN-KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 252 AEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + +V EY+ G+L +L S L + + L + + YL EG
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYL-EG--NNF 310
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNER 370
VHRD+ + N+L+ + K+SDFGL K E S + APE + +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 371 SDVYSFGILIMEVIS-GRNPVDYSRPP 396
SDV+SFGIL+ E+ S GR P Y R P
Sbjct: 367 SDVWSFGILLWEIYSFGRVP--YPRIP 391
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+ G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G+V +G +VA+K ++ +E EF E + + + H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VVH 312
++ EY+ NG L +L + + +L K + E LE K +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNER 370
RD+ + N L++ Q K+SDFGL++ + + T+ V F + PE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSVGSKFPVRWSPPEVLMYSKFSSK 186
Query: 371 SDVYSFGILIMEVIS-GRNPVD 391
SD+++FG+L+ E+ S G+ P +
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYE 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+ L +A KE E + V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+ G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVL--EDNTN--VAVKNL-LNNRGQAE-KEFKV 231
L ++ + N ++GEG +G V G L ED T+ VAVK + L+N Q E +EF
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHR-----MLVYEYIDNGNLEQWL---HGDVGP-HSP 282
E + H N++RLLG C E + + M++ ++ G+L +L + GP H P
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
L + + ++ A G+ YL +HRD+ + N +L ++DFGL+K + +
Sbjct: 146 L--QTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200
Query: 343 RSYVTTRVMGT-FGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
Y R+ ++A E + + +SDV++FG+ + E+ + G P
Sbjct: 201 DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAE-KEFKV 231
HW + + D IG G YG V V + + + AVK + + + E K+ +
Sbjct: 16 HW------DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69
Query: 232 EVEAIGRVRH-KNLVRLLGYCAEGAHRMLVYEYIDNG--NLEQWLHG---DVGPHSPLTW 285
+++ + R +V+ G + E + ++++ DV P
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE----- 124
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY 345
EI I L T K L +L E L K++HRDIK SNILLD+ N KL DFG++ L S
Sbjct: 125 EILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSI 180
Query: 346 VTTRVMGTFGYVAPE----YASTGMLNERSDVYSFGILIMEVISGRNP 389
TR G Y+APE AS + RSDV+S GI + E+ +GR P
Sbjct: 181 AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 12/201 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +G+V +G +VA+K ++ +E EF E + + + H+ LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VVH 312
++ EY+ NG L +L + + +L K + E LE K +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-------EMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEYASTGMLNERS 371
RD+ + N L++ Q K+SDFGL++ + + Y ++R + PE + +S
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 372 DVYSFGILIMEVIS-GRNPVD 391
D+++FG+L+ E+ S G+ P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+ G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFGLAKLLGA E+ Y ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ EY GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + +++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 14/202 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G+G +G VY + + A+K L + E + + EVE +RH N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
Y + L+ EY G ++ ++ S + I A L+Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSYCHSK---R 132
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
V+HRDIK N+LL K++DFG + + R + GT Y+ PE M +E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---DTLCGTLDYLPPEMIEGRMHDE 189
Query: 370 RSDVYSFGILIMEVISGRNPVD 391
+ D++S G+L E + G P +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL-GAERSYVTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-EFKVE 232
E EVS +G+G +G+VY G D T VAVK + + E+ EF E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-------PLTW 285
+ ++VRLLG ++G ++V E + +G+L+ +L + P + P T
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTL 129
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY 345
+ + + A G+ YL+ K VHRD+ + N ++ + K+ DFG+ + + E +Y
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAY 185
Query: 346 VTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
G ++APE G+ SD++SFG+++ E+ S
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IG+G G VY + + VA++ + N + Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V EY+ G+L DV + + + + L +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRDIKS NILL + KL+DFG + E+S +T V GT ++APE + +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 372 DVYSFGILIMEVISGRNP 389
D++S GI+ +E+I G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 20/204 (9%)
Query: 192 NVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLV 245
V+G G +G V+ GV V +K + + G Q+ + + AIG + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLH---GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
RLLG C G+ LV +Y+ G+L + G +GP L W +++ AKG+ YL
Sbjct: 97 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEY 361
E +VHR++ + N+LL +++DFG+A LL ++ + + ++A E
Sbjct: 150 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 362 ASTGMLNERSDVYSFGILIMEVIS 385
G +SDV+S+G+ + E+++
Sbjct: 207 IHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 188 FADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH 241
F V+G G +G VY G+ + VA+K L +A KE E + V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGD-VGPHSPLTWEIRMNIILGTAKG 298
++ RLLG C + L+ + + G L ++ H D +G L W +++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYV 357
+ YL + ++VHRD+ + N+L+ + K++DFG AKLLGA E+ Y ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
A E + +SDV+S+G+ + E+++ G P D
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 19/225 (8%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-E 228
Y E EVS +G+G +G+VY G D T VAVK + + E+ E
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS------- 281
F E + ++VRLLG ++G ++V E + +G+L+ +L + P +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRP 125
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLG 340
P T + + + A G+ YL+ K VHRD+ + N ++ + K+ DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ + + ++APE G+ SD++SFG+++ E+ S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 20/204 (9%)
Query: 192 NVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLV 245
V+G G +G V+ GV V +K + + G Q+ + + AIG + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLH---GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
RLLG C G+ LV +Y+ G+L + G +GP L W +++ AKG+ YL
Sbjct: 79 RLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEY 361
E +VHR++ + N+LL +++DFG+A LL ++ + + ++A E
Sbjct: 132 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 362 ASTGMLNERSDVYSFGILIMEVIS 385
G +SDV+S+G+ + E+++
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 34/242 (14%)
Query: 192 NVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNL 244
+GEG +G V T VAVK L N +E ++ E + +V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD--VGP------------------HSPLT 284
++L G C++ +L+ EY G+L +L VGP LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
++ ++G+ YL E K+VHRD+ + NIL+ + K+SDFGL++ + E S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 YVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNL 401
YV R G ++A E + +SDV+SFG+L+ E+++ G NP P NL
Sbjct: 206 YV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 194 IGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYC 251
IG G +G V+ G L DNT VAVK+ K +F E + + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+ +V E + G+ +L + + L + + ++ A G+ YL +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTGMLNE 369
HRD+ + N L+ ++ K+SDFG+++ A+ Y + + + APE + G +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 370 RSDVYSFGILIMEVIS-GRNP 389
SDV+SFGIL+ E S G +P
Sbjct: 295 ESDVWSFGILLWETFSLGASP 315
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 191 ENVIGEGGYGIVYHGVLEDNTN----VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLV 245
+ VIG+G +G+VYHG D A+K+L Q + F E + + H N++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 246 RLLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
L+G EG +L+ Y+ +G+L Q++ P T + ++ L A+G+ YL
Sbjct: 86 ALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLA 141
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR----VMGTFGYVAP 359
E K VHRD+ + N +LD+ + K++DFGLA+ + +R Y + + + A
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTAL 197
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNP 389
E T +SDV+SFG+L+ E+++ P
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 29/256 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
F + +IG GG+G V+ D +K + N +AE+E V+A+ ++ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH 68
Query: 247 LLG------YCAEGAHR----------MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMN 290
G Y E + + + E+ D G LEQW+ G L + +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALE 126
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
+ KG+ Y+H K+++RD+K SNI L K+ DFGL L + R
Sbjct: 127 LFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RXRS 181
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
GT Y++PE S+ + D+Y+ G+++ E++ + + +L + + + +
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA-FETSKFFTDLRDGIISDIF 240
Query: 411 NRNAEGVLDPRLQEKP 426
++ + +L L +KP
Sbjct: 241 DKKEKTLLQKLLSKKP 256
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYC 251
IG G +G V+ G L DNT VAVK+ K +F E + + H N+VRL+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+ +V E + G+ +L + + L + + ++ A G+ YL +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT----FGYVAPEYASTGML 367
HRD+ + N L+ ++ K+SDFG+++ E V G + APE + G
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 368 NERSDVYSFGILIMEVIS-GRNP 389
+ SDV+SFGIL+ E S G +P
Sbjct: 293 SSESDVWSFGILLWETFSLGASP 315
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 8/204 (3%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLN--NRGQAEKEFKV-EVEAIGRVRHKNLVRLLG 249
IG G YG + + + V L+ + +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCAEGAHRML--VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ + L V EY + G+L + L E + ++ L H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG 365
V+HRD+K +N+ LD + N KL DFGLA++L + S+ V GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNRM 191
Query: 366 MLNERSDVYSFGILIMEVISGRNP 389
NE+SD++S G L+ E+ + P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-EFKVE 232
E EVS +G+G +G+VY G D T VAVK + + E+ EF E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-------PLTW 285
+ ++VRLLG ++G ++V E + +G+L+ +L + P + P T
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTL 129
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY 345
+ + + A G+ YL+ K VHRD+ + N ++ + K+ DFG+ + + E Y
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDY 185
Query: 346 VTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
G ++APE G+ SD++SFG+++ E+ S
Sbjct: 186 YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D T VAVK L ++ + + + E+E + + +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP---LTWEIRMNI 291
++ LLG C + ++ EY GNL ++L P H+P L+ + ++
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ Y GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 19/221 (8%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-EFKVE 232
E EVS +G+G +G+VY G D T VAVK + + E+ EF E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-------PLTW 285
+ ++VRLLG ++G ++V E + +G+L+ +L + P + P T
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTL 129
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERS 344
+ + + A G+ YL+ K VHRD+ + N ++ + K+ DFG+ + + +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ + ++APE G+ SD++SFG+++ E+ S
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 19/221 (8%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-EFKVE 232
E EVS +G+G +G+VY G D T VAVK + + E+ EF E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-------PLTW 285
+ ++VRLLG ++G ++V E + +G+L+ +L + P + P T
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTL 126
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERS 344
+ + + A G+ YL+ K VHRD+ + N ++ + K+ DFG+ + + +
Sbjct: 127 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ + ++APE G+ SD++SFG+++ E+ S
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 194 IGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVR 246
+G+G +G+VY G D T VAVK + + E+ EF E + ++VR
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-------PLTWEIRMNIILGTAKGL 299
LLG ++G ++V E + +G+L+ +L + P + P T + + + A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG--YV 357
YL+ K VHRD+ + N ++ + K+ DFG+ + + E Y G ++
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 198
Query: 358 APEYASTGMLNERSDVYSFGILIMEVIS 385
APE G+ SD++SFG+++ E+ S
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLA 126
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P + + + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 182
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLA 126
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P + + + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 182
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 183 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLA 127
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P + + + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 183
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 184 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 194 IGEGGYGIVYH----GVLEDN----TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKN 243
+GEG +G V G+ +D VAVK L ++ + + + E+E + + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----------DVG--PHSPLTWEIRMNI 291
++ LLG C + ++ Y GNL ++L D+ P +T++ ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRV 350
A+G+ YL K +HRD+ + N+L+ + K++DFGLA+ + Y TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
++APE + +SDV+SFG+L+ E+ +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRV-RHKNLVRLLGY 250
V+ YGI GV + VAVK L +E+E E++ + ++ H+N+V LLG
Sbjct: 61 VMNATAYGISKTGV---SIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGA 117
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSP-------------------LTWEIRMNI 291
C L++EY G+L +L S LT+E +
Sbjct: 118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCF 177
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RV 350
AKG+ +L VHRD+ + N+L+ K+ DFGLA+ + ++ +YV
Sbjct: 178 AYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNA 234
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLK 406
++APE G+ +SDV+S+GIL+ E+ S G NP Y P + N + ++
Sbjct: 235 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP--YPGIPVDANFYKLIQ 289
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPVLA 123
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P + + + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 179
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 180 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-E 228
Y E EVS +G+G +G+VY G D T VAVK + + E+ E
Sbjct: 8 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS------- 281
F E + ++VRLLG ++G ++V E + +G+L+ +L + P +
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRP 126
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P T + + + A G+ YL+ K VHR++ + N ++ + K+ DFG+ + +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-Y 182
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G ++APE G+ SD++SFG+++ E+ S
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 44/270 (16%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
F + +IG GG+G V+ D ++ + N +AE+E V+A+ ++ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH 69
Query: 247 LLGYCAEGAHR------------------------------MLVYEYIDNGNLEQWLHGD 276
G C +G + E+ D G LEQW+
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 277 VGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA 336
G L + + + KG+ Y+H K++HRD+K SNI L K+ DFGL
Sbjct: 129 RG--EKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPP 396
L + TR GT Y++PE S+ + D+Y+ G+++ E++ + +
Sbjct: 184 TSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA-FETSK 240
Query: 397 GEVNLVEWLKTMVTNRNAEGVLDPRLQEKP 426
+L + + + + ++ + +L L +KP
Sbjct: 241 FFTDLRDGIISDIFDKKEKTLLQKLLSKKP 270
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAEK-E 228
Y E EVS +G+G +G+VY G D T VAVK + + E+ E
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS------- 281
F E + ++VRLLG ++G ++V E + +G+L+ +L + P +
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRP 125
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P T + + + A G+ YL+ K VHR++ + N ++ + K+ DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-Y 181
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G ++APE G+ SD++SFG+++ E+ S
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IG+G G VY + + VA++ + N + Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V EY+ G+L DV + + + + L +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRDIKS NILL + KL+DFG + E+S + ++GT ++APE + +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 372 DVYSFGILIMEVISGRNP 389
D++S GI+ +E+I G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLN--NRGQAEKEFKV-EVEAIGRVRHKNLVRLLG 249
IG G YG + + + V L+ + +AEK+ V EV + ++H N+VR
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 250 YCAEGAHRML--VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ + L V EY + G+L + L E + ++ L H +
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 308 P--KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG 365
V+HRD+K +N+ LD + N KL DFGLA++L + + V GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRM 191
Query: 366 MLNERSDVYSFGILIMEVISGRNP 389
NE+SD++S G L+ E+ + P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 190 DENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN 243
++ +G G +G V G + +KN N+ + E E + ++ +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-LKDELLAEANVMQQLDNPY 431
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+VR++G C E MLV E + G L ++L + E+ + +G + YL
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 486
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEY 361
E VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ + +SDV+SFG+L+ E S G+ P
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 19/225 (8%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLA 127
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLG 340
P + + + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ + + +++PE G+ SDV+SFG+++ E+ +
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 186 NGFADENVIGEGGYGIVYHGVLEDN---TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-R 240
N ++VIGEG +G V ++ + + A+K + + + ++F E+E + ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPH--------SPLTWEIR 288
H N++ LLG C + L EY +GNL +L + P S L+ +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
++ A+G+ YL + + +HRD+ + NIL+ + + K++DFGL++ + YV
Sbjct: 135 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYV-K 187
Query: 349 RVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 186 NGFADENVIGEGGYGIVYHGVLEDN---TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-R 240
N ++VIGEG +G V ++ + + A+K + + + ++F E+E + ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPH--------SPLTWEIR 288
H N++ LLG C + L EY +GNL +L + P S L+ +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
++ A+G+ YL + + +HRD+ + NIL+ + + K++DFGL++ + YV
Sbjct: 145 LHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYV-K 197
Query: 349 RVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-EFKVE 232
E EV+ +G+G +G+VY GV E T VA+K + E+ EF E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------SPLTW 285
+ ++VRLLG ++G +++ E + G+L+ +L + P +P +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSL 124
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY 345
+ + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + + E Y
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 180
Query: 346 VTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKN 243
F + IG+G +G VY G+ DN VA+K + L ++ + E+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ R G + ++ EY+ G+ D+ PL I+ KGL YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSAL-----DLLKPGPLEETYIATILREILKGLDYLH 133
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+ +HRDIK++N+LL +Q + KL+DFG+A L + +GT ++APE
Sbjct: 134 S---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK 189
Query: 364 TGMLNERSDVYSFGILIMEVISGRNP 389
+ ++D++S GI +E+ G P
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 190 DENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN 243
++ +G G +G V G + +KN N+ + E E + ++ +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-LKDELLAEANVMQQLDNPY 432
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+VR++G C E MLV E + G L ++L + E+ + +G + YL
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG----MKYLE 487
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEY 361
E VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ + +SDV+SFG+L+ E S G+ P
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IG+G G VY + + VA++ + N + Q +KE + E+ + ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V EY+ G+L DV + + + + L +LH +V+
Sbjct: 88 LVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HR+IKS NILL + KL+DFG + E+S +T V GT ++APE + +
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 372 DVYSFGILIMEVISGRNP 389
D++S GI+ +E+I G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 21/222 (9%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-EFKVE 232
E EV+ +G+G +G+VY GV E T VA+K + E+ EF E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------SPLTW 285
+ ++VRLLG ++G +++ E + G+L+ +L + P +P +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSL 128
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY 345
+ + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + + E Y
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDY 184
Query: 346 VTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 185 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IG+G G VY + + VA++ + N + Q +KE + E+ + ++ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V EY+ G+L DV + + + + L +LH +V+
Sbjct: 87 LVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRDIKS NILL + KL+DFG + E+S + V GT ++APE + +
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 372 DVYSFGILIMEVISGRNP 389
D++S GI+ +E+I G P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 12/198 (6%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IG+G G VY + + VA++ + N + Q +KE + E+ + ++ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
G +V EY+ G+L DV + + + + L +LH +V+
Sbjct: 88 LVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERS 371
HRDIKS NILL + KL+DFG + E+S + V GT ++APE + +
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 372 DVYSFGILIMEVISGRNP 389
D++S GI+ +E+I G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGR 238
+E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+V G + E++D G+L+Q L + +I + + KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKG 116
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
LTYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPV------DYSRPPGEV-NLVEWLKTMVTN 411
PE + +SD++S G+ ++E+ GR P+ + SRPP + L++++
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPP 231
Query: 412 RNAEGVLDPRLQE 424
+ GV Q+
Sbjct: 232 KLPSGVFSLEFQD 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQ---AEKEFKVEVEAIG 237
+ + + F +G+G +G VY + N + A+K L ++ + E + + E+E
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
+RH N++R+ Y + L+ E+ G L + ++ H + + A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 125
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L Y HE KV+HRDIK N+L+ + K++DFG + + R + GT Y+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR---RXMCGTLDYL 179
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
PE +E+ D++ G+L E + G P D
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQ---AEKEFKVEVEAIG 237
+ + + F +G+G +G VY + N + A+K L ++ + E + + E+E
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
+RH N++R+ Y + L+ E+ G L + ++ H + + A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 125
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L Y HE KV+HRDIK N+L+ + K++DFG + + R + GT Y+
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR---RXMCGTLDYL 179
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
PE +E+ D++ G+L E + G P D
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQ---AEKEFKVEVEAIG 237
+ + + F +G+G +G VY + N + A+K L ++ + E + + E+E
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
+RH N++R+ Y + L+ E+ G L + ++ H + + A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEELAD 126
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L Y HE KV+HRDIK N+L+ + K++DFG + + R + GT Y+
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR---RXMCGTLDYL 180
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
PE +E+ D++ G+L E + G P D
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 105/221 (47%), Gaps = 19/221 (8%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-EFKVE 232
E EV+ +G+G +G+VY GV E T VA+K + E+ EF E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 233 VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------SPLTW 285
+ ++VRLLG ++G +++ E + G+L+ +L + P +P +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSL 122
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK-LLGAERS 344
+ + A G+ YL+ K VHRD+ + N ++ + + K+ DFG+ + + +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ + +++PE G+ SDV+SFG+++ E+ +
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 21/226 (9%)
Query: 176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAEK-E 228
Y E EV+ +G+G +G+VY GV E T VA+K + E+ E
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 229 FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH-------S 281
F E + ++VRLLG ++G +++ E + G+L+ +L + P +
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLA 120
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P + + + A G+ YL+ K VHRD+ + N + + + K+ DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-Y 176
Query: 342 ERSYVTTRVMGTFG--YVAPEYASTGMLNERSDVYSFGILIMEVIS 385
E Y G +++PE G+ SDV+SFG+++ E+ +
Sbjct: 177 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 190 DENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN 243
++ +G G +G V G + +KN N+ + E E + ++ +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPY 87
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+VR++G C E MLV E + G L ++L + E+ + + G+ YL
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLE 142
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEY 361
E VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ + +SDV+SFG+L+ E S G+ P
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 93
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 146
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 93
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 146
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 30/228 (13%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
V G +G V+ L N VAVK + ++ + E+ EV ++ ++H+N+++ +G
Sbjct: 31 VKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 252 AEGA----HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE--- 304
G L+ + + G+L +L +V ++W +I A+GL YLHE
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHIAETMARGLAYLHEDIP 142
Query: 305 ----GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAP 359
G +P + HRDIKS N+LL ++DFGLA A +S T +GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 360 EYASTGMLNERS-----DVYSFGILIMEVIS----GRNPVDYSRPPGE 398
E + +R D+Y+ G+++ E+ S PVD P E
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 34/242 (14%)
Query: 192 NVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNL 244
+GEG +G V T VAVK L N +E ++ E + +V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD--VGP------------------HSPLT 284
++L G C++ +L+ EY G+L +L VGP LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
++ ++G+ YL E K+VHRD+ + NIL+ + K+SDFGL++ + E S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 YVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNL 401
V R G ++A E + +SDV+SFG+L+ E+++ G NP P NL
Sbjct: 206 XV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 83
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 136
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 137 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 194 IGEGGYG-IVYHGVLEDNTNVAVK--NLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGY 250
IGEG +G + ED +K N+ + +E + EV + ++H N+V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVG----PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
E +V +Y + G+L + ++ G L W +++ + L ++H+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALKHVHDR- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
K++HRDIKS NI L K +L DFG+A++L + + +GT Y++PE
Sbjct: 145 --KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE-LARACIGTPYYLSPEICENKP 201
Query: 367 LNERSDVYSFGILIMEVIS 385
N +SD+++ G ++ E+ +
Sbjct: 202 YNNKSDIWALGCVLYELCT 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 77
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 130
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 71
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 124
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 125 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 73
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 126
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ +Y + G + + APE +
Sbjct: 127 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I ++ H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 186 NGFADENVIGEGGYGIVYHGVLEDN---TNVAVKNLLNNRGQAE-KEFKVEVEAIGRV-R 240
N ++VIGEG +G V ++ + + A+K + + + ++F E+E + ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGP--------HSPLTWEIR 288
H N++ LLG C + L EY +GNL +L + P S L+ +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
++ A+G+ YL + + +HR++ + NIL+ + + K++DFGL++ + YV
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYV-K 194
Query: 349 RVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
+ MG ++A E + + SDV+S+G+L+ E++S
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I ++ H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVT-TRVMGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL----HGDVGPHSPLTWEIR- 288
+ + +H+N+V LLG C G +++ EY G+L +L D+ E+R
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 289 -MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT 347
++ A+G+ +L +HRD+ + N+LL K+ DFGLA+ + + +Y+
Sbjct: 154 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 210
Query: 348 T-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 211 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
+G G +G+V H V E T N A K ++ ++ + E++ + +RH LV L
Sbjct: 59 LGTGAFGVV-HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+ +++YE++ G L + + + H+ ++ + + + KGL ++HE V
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 171
Query: 312 HRDIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
H D+K NI+ + + KL DFGL L ++S T GT + APE A +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGY 229
Query: 370 RSDVYSFGILIMEVISGRNP 389
+D++S G+L ++SG +P
Sbjct: 230 YTDMWSVGVLSYILLSGLSP 249
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+GEG YG VY + ++ + + ++ K E+ + + ++V+ G +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK-EISIMQQCDSPHVVKYYGSYFK 95
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
+V EY G++ + + LT + I+ T KGL YLH + +HR
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHR 149
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
DIK+ NILL+ + + KL+DFG+A L + V+GT ++APE N +D+
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADI 208
Query: 374 YSFGILIMEVISGRNP 389
+S GI +E+ G+ P
Sbjct: 209 WSLGITAIEMAEGKPP 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
+G G +G+V H V E T N A K ++ ++ + E++ + +RH LV L
Sbjct: 165 LGTGAFGVV-HRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+ +++YE++ G L + + + H+ ++ + + + KGL ++HE V
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYV 277
Query: 312 HRDIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
H D+K NI+ + + KL DFGL L ++S T GT + APE A +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGY 335
Query: 370 RSDVYSFGILIMEVISGRNP 389
+D++S G+L ++SG +P
Sbjct: 336 YTDMWSVGVLSYILLSGLSP 355
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 19/224 (8%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL----HGDVGPHSPLTWEIR- 288
+ + +H+N+V LLG C G +++ EY G+L +L D+ E+R
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 289 -MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT 347
++ A+G+ +L +HRD+ + N+LL K+ DFGLA+ + + +Y+
Sbjct: 162 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 218
Query: 348 T-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 219 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 262
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGR 238
+E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+V G + E++D G+L+Q L + +I + + KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKG 116
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
LTYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
PE + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGR 238
+E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+V G + E++D G+L+Q L + +I + + KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKG 116
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
LTYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
PE + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 214
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 194 IGEGGYGIVYHGVLE---DNT--NVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V + DNT VAVK+L G + K E+E + + H+N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 248 LGYCAE--GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
G C E G L+ E++ +G+L+++L + + + + ++ + KG+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT---RVMGTFGYVAPEYA 362
+ VHRD+ + N+L++ + K+ DFGL K + ++ T R F Y APE
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 363 STGMLNERSDVYSFGILIMEVIS 385
SDV+SFG+ + E+++
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 31/229 (13%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
+ G +G V+ L N VAVK L ++ + E E+ + ++H+NL++ +
Sbjct: 22 IKARGRFGCVWKAQLM-NDFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQFIAAE 78
Query: 252 AEGAHR----MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE--- 304
G++ L+ + D G+L +L G++ +TW ++ ++GL+YLHE
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 305 -----GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA-KLLGAERSYVTTRVMGTFGYVA 358
G +P + HRD KS N+LL L+DFGLA + + T +GT Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 359 PEYASTGMLNERS-----DVYSFGILIMEVIS----GRNPVDYSRPPGE 398
PE + +R D+Y+ G+++ E++S PVD P E
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFE 242
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 17/230 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGRV 239
E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+V G + E++D G+L+Q L + +I + + KGL
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGL 120
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
TYL E + K++HRD+K SNIL++ + KL DFG++ L E + +GT Y++P
Sbjct: 121 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSP 175
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV 409
E + +SD++S G+ ++E+ GR Y RPP + + E L +V
Sbjct: 176 ERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPRPP--MAIFELLDYIV 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 18/203 (8%)
Query: 194 IGEGGYGIVYHGVLE---DNT--NVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNLVRL 247
+GEG +G V + DNT VAVK+L G + K E+E + + H+N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 248 LGYCAE--GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
G C E G L+ E++ +G+L+++L + + + + ++ + KG+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT---RVMGTFGYVAPEYA 362
+ VHRD+ + N+L++ + K+ DFGL K + ++ T R F Y APE
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 363 STGMLNERSDVYSFGILIMEVIS 385
SDV+SFG+ + E+++
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGR 238
+E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+V G + E++D G+L+Q L + +I + + KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKG 116
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
LTYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
PE + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGR 238
+E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+V G + E++D G+L+Q L + +I + + KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKG 116
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
LTYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++
Sbjct: 117 LTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMS 171
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
PE + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 34/242 (14%)
Query: 192 NVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVRHKNL 244
+GEG +G V T VAVK L N +E ++ E + +V H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD--VGP------------------HSPLT 284
++L G C++ +L+ EY G+L +L VGP LT
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 285 WEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
++ ++G+ YL E +VHRD+ + NIL+ + K+SDFGL++ + E S
Sbjct: 149 MGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 345 YVTTRVMGTF--GYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNL 401
V R G ++A E + +SDV+SFG+L+ E+++ G NP P NL
Sbjct: 206 XV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL 264
Query: 402 VE 403
++
Sbjct: 265 LK 266
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 15/226 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGRV 239
E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+V G + E++D G+L+Q L + +I + + KGL
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGL 179
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
TYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++P
Sbjct: 180 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSP 234
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
E + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 276
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDN-TNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRL---- 247
+G GG+G V + +D VA+K +E + +E++ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 248 --LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
L A +L EY + G+L ++L+ IR ++ + L YLHE
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN 140
Query: 306 LEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
+++HRD+K NI+L ++ K+ D G AK L ++ + T +GT Y+APE
Sbjct: 141 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELL 195
Query: 363 STGMLNERSDVYSFGILIMEVISGRNP 389
D +SFG L E I+G P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDN-TNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRL---- 247
+G GG+G V + +D VA+K +E + +E++ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 248 --LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
L A +L EY + G+L ++L+ IR ++ + L YLHE
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHEN 141
Query: 306 LEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
+++HRD+K NI+L ++ K+ D G AK L ++ + T +GT Y+APE
Sbjct: 142 ---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELL 196
Query: 363 STGMLNERSDVYSFGILIMEVISGRNP 389
D +SFG L E I+G P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G +G VY ++ + +A +++ + + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
+ ++ E+ G ++ + + PLT + T L YLH+ K++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR---VMGTFGYVAPEYASTGMLNE 369
RD+K+ NIL + KL+DFG++ A+ + R +GT ++APE +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 370 R-----SDVYSFGILIMEVISGRNP 389
R +DV+S GI ++E+ P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLN-NRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G G +G VY G + N VAVK L Q E +F +E I + H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK----GLTYL 302
+G + R ++ E + G+L+ +L + P + M +L A+ G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLLGAERSYVTTRV-MGTFGYVA 358
E +HRDI + N LL K+ DFG+A+ + Y M ++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 359 PEYASTGMLNERSDVYSFGILIMEVIS 385
PE G+ ++D +SFG+L+ E+ S
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 192 NVIGEGGYGIVYHGV-LEDNTNV----AVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLV 245
V+G G +G VY G+ + D NV A+K L N +A KE E + V +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLH---GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
RLLG C + LV + + G L + G +G L W +++ AKG++YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEY 361
+ ++VHRD+ + N+L+ + K++DFGLA+LL E Y ++A E
Sbjct: 136 EDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 362 ASTGMLNERSDVYSFGILIMEVIS-GRNPVD 391
+SDV+S+G+ + E+++ G P D
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 15/226 (6%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGRV 239
E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+V G + E++D G+L+Q L + +I + + KGL
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGL 144
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
TYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++P
Sbjct: 145 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSP 199
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
E + +SD++S G+ ++E+ GR P+ PP + +E +
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAKELELM 241
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 17/206 (8%)
Query: 193 VIGE-GGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGY 250
+IGE G +G VY ++ + +A +++ + + E E + VE++ + H N+V+LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+ ++ E+ G ++ + + PLT + T L YLH+ K+
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KI 129
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLN 368
+HRD+K+ NIL + KL+DFG++ R+ + R +GT ++APE
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 369 ER-----SDVYSFGILIMEVISGRNP 389
+R +DV+S GI ++E+ P
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G +G VY ++ + +A +++ + + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
+ ++ E+ G ++ + + PLT + T L YLH+ K++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR---VMGTFGYVAPEYASTGMLNE 369
RD+K+ NIL + KL+DFG++ A+ + R +GT ++APE +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKD 214
Query: 370 R-----SDVYSFGILIMEVISGRNP 389
R +DV+S GI ++E+ P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-R 240
V ++G+ + IG G Y V + N AVK + +++++ E+E + R +
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQ 79
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGL 299
H N++ L +G H LV E + G L D E + +L T K +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELL-----DKILRQKFFSEREASFVLHTIGKTV 134
Query: 300 TYLHEGLEPKVVHRDIKSSNIL-LDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFG 355
YLH VVHRD+K SNIL +D+ NP ++ DFG AK L AE + T T
Sbjct: 135 EYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+VAPE +E D++S GIL+ +++G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G +G VY ++ + +A +++ + + E E + VE++ + H N+V+LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
+ ++ E+ G ++ + + PLT + T L YLH+ K++H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR---VMGTFGYVAPEYASTGMLNE 369
RD+K+ NIL + KL+DFG++ A+ + R +GT ++APE +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKD 214
Query: 370 R-----SDVYSFGILIMEVISGRNP 389
R +DV+S GI ++E+ P
Sbjct: 215 RPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP--------LTWEIRMNIIL 293
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 294 GTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RVMG 352
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLL---NNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
IGEG YG V+ E + VA+K + ++ G + E+ + ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWL---HGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
LV+E+ D +L+++ +GD+ P EI + + KGL + H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP------EIVKSFLFQLLKGLGFCHSR- 120
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
V+HRD+K N+L+++ KL+DFGLA+ G + V+ T Y P+
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 367 LNERS-DVYSFGILIMEVISGRNPV 390
L S D++S G + E+ + P+
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCA 252
IGEG GIV + + +++ R Q +E EV + +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
G ++ E++ G L D+ L E + + L YLH V+H
Sbjct: 113 VGEELWVLMEFLQGGAL-----TDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIH 164
Query: 313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR--VMGTFGYVAPEYASTGMLNER 370
RDIKS +ILL KLSDFG + + V R ++GT ++APE S +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKD---VPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 371 SDVYSFGILIMEVISGRNP 389
D++S GI+++E++ G P
Sbjct: 222 VDIWSLGIMVIEMVDGEPP 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ + ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSYLLYQMLV-----GIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G+++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 25/230 (10%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---------HSP-- 282
+ + +H+N+V LLG C G +++ EY G+L +L P H+P
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 283 -LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
L+ ++ A+G+ +L +HRD+ + N+LL K+ DFGLA+ +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 342 ERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+ +Y+ ++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 219 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ + ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSYLLYQMLV-----GIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G+++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 22/202 (10%)
Query: 194 IGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQA--EKEFKVEVEAIGRVRHKNLVRLLGY 250
IGEG YG+V+ D VA+K L + +K E+ + +++H NLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 251 CAEGAHRMLVYEYIDNG---NLEQWLHGDVGPH--SPLTWEIRMNIILGTAKGLTYLHEG 305
LV+EY D+ L+++ G V H +TW+ T + + + H+
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE-YAST 364
+HRD+K NIL+ K KL DFG A+LL Y V T Y +PE
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGD 177
Query: 365 GMLNERSDVYSFGILIMEVISG 386
DV++ G + E++SG
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-R 240
V ++G+ + IG G Y V + N AVK + +++++ E+E + R +
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVI----DKSKRDPSEEIEILLRYGQ 79
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGL 299
H N++ L +G H LV E + G L D E + +L T K +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELL-----DKILRQKFFSEREASFVLHTIGKTV 134
Query: 300 TYLHEGLEPKVVHRDIKSSNIL-LDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFG 355
YLH VVHRD+K SNIL +D+ NP ++ DFG AK L AE + T T
Sbjct: 135 EYLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TAN 190
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+VAPE +E D++S GIL+ +++G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP--------LTWEIRMNIIL 293
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 294 GTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RVMG 352
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 93
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 154 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++D +L++++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 82
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 194 IGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G +G V G + +KN N+ + E E + ++ + +VR+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD-ELLAEANVMQQLDNPYIVRM 77
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+G C E MLV E + G L ++L + E+ + + G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL----VHQVSMGMKYLEES-- 130
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF--GYVAPEYASTG 365
VHRD+ + N+LL Q K+SDFGL+K L A+ + + G + + APE +
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 366 MLNERSDVYSFGILIMEVIS-GRNP 389
+ +SDV+SFG+L+ E S G+ P
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 82
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 128
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + YV
Sbjct: 189 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 13/230 (5%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGRV 239
E+ + F + +G G G+V+ + + V + L L + + E++ +
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+V G + E++D G+L+Q L + +I + + KGL
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGL 136
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
TYL E + K++HRD+K SNIL++ + KL DFG++ G + +GT Y++P
Sbjct: 137 TYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSP 191
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV 409
E + +SD++S G+ ++E+ GR P+ G + + E L +V
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI--GSGSGSMAIFELLDYIV 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 30/220 (13%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 93
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHG---DVGPHSP-------LTWEIRMNI 291
N+V LLG C + G M++ E+ GNL +L + P+ P LT E +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-RV 350
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 28/254 (11%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRV 239
V F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGL 120
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVA 358
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRA 175
Query: 359 PE------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR 412
PE Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 PEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLG 225
Query: 413 NAEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 TPDEVVWPGVTSMP 239
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ + ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSYLLYQMLV-----GIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 53/307 (17%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLV 245
F +G GG+G+V+ + D+ N A+K + L NR A ++ EV+A+ ++ H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 246 RLL-GYCAEGAHRML------VYEYID-----NGNLEQWLHGDVGPHSPLTWEIRMNIIL 293
R + + L VY YI NL+ W++G + ++I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE-RERSVCLHIFL 125
Query: 294 GTAKGLTYLH-EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA---ERSYVT-- 347
A+ + +LH +GL +HRD+K SNI K+ DFGL + E++ +T
Sbjct: 126 QIAEAVEFLHSKGL----MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 348 ------TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNL 401
T +GT Y++PE + + D++S G+++ E++ P +
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----------PFSTQM 231
Query: 402 VEWLKTMVTNRNAEGVLDPRLQEK-PCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH--M 458
E ++T+ RN + P +K PC + P+ +RP+ ++I +
Sbjct: 232 -ERVRTLTDVRNLK--FPPLFTQKYPCEYVMVQDM------LSPSPMERPEAINIIENAV 282
Query: 459 LEAEEFP 465
E +FP
Sbjct: 283 FEDLDFP 289
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKN 243
F IG+G +G V+ G+ DN VA+K + L ++ + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ + G + ++ EY+ G+ D+ PL I+ KGL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
K +HRDIK++N+LL + KL+DFG+A L + T V GT ++APE
Sbjct: 122 S---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 364 TGMLNERSDVYSFGILIMEVISGRNP 389
+ ++D++S GI +E+ G P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-----DVGP-----HSPL 283
+ + +H+N+V LLG C G +++ EY G+L +L + P +S L
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+ ++ A+G+ +L +HRD+ + N+LL K+ DFGLA+ + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 344 SYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+Y+ ++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+GEG +G V D TN VAVK L + G Q +K E++ + + H+++++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 247 LLGYCAEGAHR--MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C + + LV EY+ G+L +L P + + +G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+HR++ + N+LLD K+ DFGLAK + Y R G F Y APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD-- 419
SDV+SFG+ + E+++ + S P + L+ + +T +L+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 420 ---PRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEAEEFPFR 467
PR + PC C + A RP ++I +L+ +R
Sbjct: 251 ERLPRPDKCPCE-----VYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 10/202 (4%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGY 250
IG GG+ V + VA+K + N G K E+EA+ +RH+++ +L
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+V EY G L + + L+ E + + Y+H
Sbjct: 77 LETANKIFMVLEYCPGGELFDY----IISQDRLSEEETRVVFRQIVSAVAYVHSQ---GY 129
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS-TGMLNE 369
HRD+K N+L D+ KL DFGL + Y G+ Y APE L
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGS 189
Query: 370 RSDVYSFGILIMEVISGRNPVD 391
+DV+S GIL+ ++ G P D
Sbjct: 190 EADVWSMGILLYVLMCGFLPFD 211
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+GEG +G V D TN VAVK L + G Q +K E++ + + H+++++
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 247 LLGYCAEGAHR--MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C + + LV EY+ G+L +L P + + +G+ YLH
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+HR++ + N+LLD K+ DFGLAK + Y R G F Y APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD-- 419
SDV+SFG+ + E+++ + S P + L+ + +T +L+
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLTHCDSSQ-SPPTKFLELIGIAQGQMTVLRLTELLERG 250
Query: 420 ---PRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEAEEFPFR 467
PR + PC C + A RP ++I +L+ +R
Sbjct: 251 ERLPRPDKCPCE-----VYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKN 243
F IG+G +G V+ G+ DN VA+K + L ++ + E+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ + G + ++ EY+ G+ L PL I+ KGL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 136
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
K +HRDIK++N+LL + KL+DFG+A L + +GT ++APE
Sbjct: 137 S---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK 192
Query: 364 TGMLNERSDVYSFGILIMEVISGRNP 389
+ ++D++S GI +E+ G P
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 173
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 174 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 223
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 224 PDEVVWPGVTSMP 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 32/237 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL----HGDVGPH--------- 280
+ + +H+N+V LLG C G +++ EY G+L +L +GP
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 281 ------SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG 334
PL ++ A+G+ +L +HRD+ + N+LL K+ DFG
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 335 LAKLLGAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
LA+ + + +Y+ ++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 204 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 260
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELD-HERMSY-----LLYQMLXGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKN 243
F IG+G +G V+ G+ DN VA+K + L ++ + E+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ + G + ++ EY+ G+ D+ PL I+ KGL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS-----ALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
K +HRDIK++N+LL + KL+DFG+A L + +GT ++APE
Sbjct: 122 S---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIK 177
Query: 364 TGMLNERSDVYSFGILIMEVISGRNP 389
+ ++D++S GI +E+ G P
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKN 243
F IG+G +G V+ G+ DN VA+K + L ++ + E+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ + G + ++ EY+ G+ L PL I+ KGL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 141
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
K +HRDIK++N+LL + KL+DFG+A L + T V GT ++APE
Sbjct: 142 S---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 197
Query: 364 TGMLNERSDVYSFGILIMEVISGRNP 389
+ ++D++S GI +E+ G P
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDATLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLSFCHS 121
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 227 VWPGVTSMP 235
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKEFKVEVEA-----IGRVRHKNL 244
IGEG YG V+ D N VA+K + G+ E + H N+
Sbjct: 19 IGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 245 VRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
VRL C LV+E++D +L +L D P + E +++ +GL
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
+LH +VVHRD+K NIL+ KL+DFGLA++ + + T V+ T Y AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPV 390
E D++S G + E+ R P+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 175 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 224
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 225 PDEVVWPGVTSMP 237
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 173 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 222
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 223 PDEVVWPGVTSMP 235
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 173 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 222
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 223 PDEVVWPGVTSMP 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IGEG YG+VY A+K + L + + E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+LV+E++D +L++ L G +T + + +L G+ Y H+ +V+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHDR---RVL 122
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE-YASTGMLNER 370
HRD+K N+L++++ K++DFGLA+ G T V+ T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 371 SDVYSFGILIMEVISG 386
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 23/222 (10%)
Query: 183 VSTNGFADENVIGEGGYGIVYH------GVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAI 236
++T+ + IG G YG VY G +V V N G EV +
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 237 GRVR---HKNLVRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIR 288
R+ H N+VRL+ CA LV+E++D +L +L D P L E
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETI 122
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT 348
+++ +GL +LH +VHRD+K NIL+ KL+DFGLA++ + + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--T 177
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
V+ T Y APE D++S G + E+ R P+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGRVRHK 242
F IGEG YG+VY + V L R E E E+ + + H
Sbjct: 5 FQKVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N+V+LL LV+E++ + +L++++ PL + + + +GL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE- 360
H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEI 174
Query: 361 -----YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE 415
Y ST + D++S G + E+++ R + PG+ + + + T +
Sbjct: 175 LLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPD 224
Query: 416 GVLDPRLQEKP 426
V+ P + P
Sbjct: 225 EVVWPGVTSMP 235
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 32/251 (12%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGRVRHK 242
F IGEG YG+VY + V L R E E E+ + + H
Sbjct: 4 FQKVEKIGEGTYGVVYKA--RNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N+V+LL LV+E++ + +L++++ PL + + + +GL +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE- 360
H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEI 173
Query: 361 -----YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE 415
Y ST + D++S G + E+++ R + PG+ + + + T +
Sbjct: 174 LLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPD 223
Query: 416 GVLDPRLQEKP 426
V+ P + P
Sbjct: 224 EVVWPGVTSMP 234
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 173 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 222
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 223 PDEVVWPGVTSMP 235
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 175 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 224
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 225 PDEVVWPGVTSMP 237
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 177 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 226
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 227 PDEVVWPGVTSMP 239
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IGEG YG+VY A+K + L + + E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+LV+E++D +L++ L G +T + + +L G+ Y H+ +V+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHDR---RVL 122
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE-YASTGMLNER 370
HRD+K N+L++++ K++DFGLA+ G T V+ T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTT 181
Query: 371 SDVYSFGILIMEVISG 386
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 173 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 222
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 223 PDEVVWPGVTSMP 235
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 174 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 223
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 224 PDEVVWPGVTSMP 236
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 175 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 224
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 225 PDEVVWPGVTSMP 237
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL+ NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELD-HERMSY-----LLYQMLXGIKH 134
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 189
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 26/248 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 128
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE---- 360
+V+HRD+K N+L++ + KL+DFGLA+ G T V+ T Y APE
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 361 --YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL 418
Y ST + D++S G + E+++ R + PG+ + + + T + V+
Sbjct: 185 CKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 419 DPRLQEKP 426
P + P
Sbjct: 235 WPGVTSMP 242
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 142
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 197
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELD-HERMSY-----LLYQMLXGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 31/221 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 92
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP-----------LTWEIRMN 290
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT-R 349
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 350 VMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 174 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 223
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 224 PDEVVWPGVTSMP 236
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPEVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 121
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 227 VWPGVTSMP 235
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 120
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 226 VWPGVTSMP 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKEFKVEVEA-----IGRVRHKNL 244
IGEG YG V+ D N VA+K + G+ E + H N+
Sbjct: 19 IGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 245 VRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
VRL C LV+E++D +L +L D P + E +++ +GL
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
+LH +VVHRD+K NIL+ KL+DFGLA++ + + T V+ T Y AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPV 390
E D++S G + E+ R P+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL+ NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 121
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 177 GXKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 227 VWPGVTSMP 235
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+GEG +G V D TN VAVK L + G Q +K E++ + + H+++++
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 247 LLGYC--AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C A A LV EY+ G+L +L P + + +G+ YLH
Sbjct: 98 YKGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTFGYVAPEYA 362
+HRD+ + N+LLD K+ DFGLAK + G E V + APE
Sbjct: 153 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 363 STGMLNERSDVYSFGILIMEVIS 385
SDV+SFG+ + E+++
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 120
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 226 VWPGVTSMP 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLL---NNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
IGEG YG V+ E + VA+K + ++ G + E+ + ++HKN+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHD 68
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWL---HGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
LV+E+ D +L+++ +GD+ P EI + + KGL + H
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP------EIVKSFLFQLLKGLGFCHSR- 120
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
V+HRD+K N+L+++ KL++FGLA+ G + V+ T Y P+
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAK 177
Query: 367 LNERS-DVYSFGILIMEVISGRNPV 390
L S D++S G + E+ + P+
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKEFKVEVEA-----IGRVRHKNL 244
IGEG YG V+ D N VA+K + G+ E + H N+
Sbjct: 19 IGEGAYGKVFKA--RDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 76
Query: 245 VRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
VRL C LV+E++D +L +L D P + E +++ +GL
Sbjct: 77 VRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
+LH +VVHRD+K NIL+ KL+DFGLA++ + + T V+ T Y AP
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSVVVTLWYRAP 188
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPV 390
E D++S G + E+ R P+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 145 ERAAGSHHGSGDQTVAAAITPEVSHLGWGHW-------YTLRELE--------VSTNGFA 189
E A + G+GD + ++HLG + Y LR L+ + + F
Sbjct: 129 ETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFL 188
Query: 190 DENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLV 245
D V+G GG+G V+ ++ + A K L R + K ++ VE + + +V H +
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK---GLTYL 302
L Y E + + I NG ++ +V +P E R I TA+ GL +L
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA--IFYTAQIVSGLEHL 305
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K N+LLD N ++SD GLA L A ++ T GT G++APE
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELL 361
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPV 390
+ D ++ G+ + E+I+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L++++ PL + + + +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 174 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 223
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 224 PDEVVWPGVTSMP 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 145 ERAAGSHHGSGDQTVAAAITPEVSHLGWGHW-------YTLRELE--------VSTNGFA 189
E A + G+GD + ++HLG + Y LR L+ + + F
Sbjct: 129 ETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFL 188
Query: 190 DENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLV 245
D V+G GG+G V+ ++ + A K L R + K ++ VE + + +V H +
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK---GLTYL 302
L Y E + + I NG ++ +V +P E R I TA+ GL +L
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA--IFYTAQIVSGLEHL 305
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K N+LLD N ++SD GLA L A ++ T GT G++APE
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELL 361
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPV 390
+ D ++ G+ + E+I+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 128
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 183
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 184 GXKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 233
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 234 VWPGVTSMP 242
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKV--EVEAIGRV 239
++T+ + IG G YG VY + + VA+K++ G+ EV + R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 240 R---HKNLVRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
H N+VRL+ CA LV+E++D +L +L D P L E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
+ +GL +LH +VHRD+K NIL+ KL+DFGLA++ + + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP--VV 172
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
T Y APE D++S G + E+ R P+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 11/196 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYC 251
IGEG YG+VY A+K + L + + E+ + ++H N+V+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
+LV+E++D +L++ L G +T + + +L G+ Y H+ +V+
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAK---SFLLQLLNGIAYCHDR---RVL 122
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE-YASTGMLNER 370
HRD+K N+L++++ K++DFGLA+ G T ++ T Y AP+ + +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTT 181
Query: 371 SDVYSFGILIMEVISG 386
D++S G + E+++G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 82
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 121
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 226
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 227 VWPGVTSMP 235
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 145 ERAAGSHHGSGDQTVAAAITPEVSHLGWGHW-------YTLRELE--------VSTNGFA 189
E A + G+GD + ++HLG + Y LR L+ + + F
Sbjct: 129 ETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFL 188
Query: 190 DENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLV 245
D V+G GG+G V+ ++ + A K L R + K ++ VE + + +V H +
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK---GLTYL 302
L Y E + + I NG ++ +V +P E R I TA+ GL +L
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA--IFYTAQIVSGLEHL 305
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K N+LLD N ++SD GLA L A ++ T GT G++APE
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELL 361
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPV 390
+ D ++ G+ + E+I+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 29/268 (10%)
Query: 145 ERAAGSHHGSGDQTVAAAITPEVSHLGWGHW-------YTLRELE--------VSTNGFA 189
E A + G+GD + ++HLG + Y LR L+ + + F
Sbjct: 129 ETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFL 188
Query: 190 DENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLV 245
D V+G GG+G V+ ++ + A K L R + K ++ VE + + +V H +
Sbjct: 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK---GLTYL 302
L Y E + + I NG ++ +V +P E R I TA+ GL +L
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA--IFYTAQIVSGLEHL 305
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K N+LLD N ++SD GLA L A ++ T GT G++APE
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-KTKGYAGTPGFMAPELL 361
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPV 390
+ D ++ G+ + E+I+ R P
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKV--EVEAIGRV 239
++T+ + IG G YG VY + + VA+K++ G+ EV + R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 240 R---HKNLVRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
H N+VRL+ CA LV+E++D +L +L D P L E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
+ +GL +LH +VHRD+K NIL+ KL+DFGLA++ + + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VV 172
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
T Y APE D++S G + E+ R P+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L+ ++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 18/210 (8%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLG-Y 250
++G G YG VY G +A +++ G E+E K E+ + + H+N+ G +
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 251 CAEGAHRM-----LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ M LV E+ G++ + G + L E I +GL++LH+
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH 148
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST- 364
KV+HRDIK N+LL + KL DFG++ L T +GT ++APE +
Sbjct: 149 ---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIACD 204
Query: 365 ----GMLNERSDVYSFGILIMEVISGRNPV 390
+ +SD++S GI +E+ G P+
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L+ ++ PL + + + +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 175 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 224
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 225 PDEVVWPGVTSMP 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 82
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L+ ++ PL + + + +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 173 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 222
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 223 PDEVVWPGVTSMP 235
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKN 243
F+D IG G +G VY N+ V A+K + + Q+ ++++ EV + ++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL-GTAKGLTYL 302
++ G LV EY G+ L H E+ + + G +GL YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY- 361
H ++HRD+K+ NILL + KL DFG A ++ +V GT ++APE
Sbjct: 171 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 222
Query: 362 --ASTGMLNERSDVYSFGILIMEVISGRNPV 390
G + + DV+S GI +E+ + P+
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVR 240
S F IGEG YG+VY + VA+K + L+ + + E+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H N+V+LL LV+E++ + +L+ ++ PL + + + +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
+ H +V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y AP
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 360 E------YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN 413
E Y ST + D++S G + E+++ R + PG+ + + + T
Sbjct: 176 EILLGCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGT 225
Query: 414 AEGVLDPRLQEKP 426
+ V+ P + P
Sbjct: 226 PDEVVWPGVTSMP 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 193 VIGEGGYGIVYH--GVLEDNT------NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNL 244
V+G+GGYG V+ V NT V K ++ + K E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLH--GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
V L+ G L+ EY+ G L L G + + +++ LG +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K NI+L+ Q + KL+DFGL K VT GT Y+APE
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEIL 193
Query: 363 STGMLNERSDVYSFGILIMEVISGRNP 389
N D +S G L+ ++++G P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 55/238 (23%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----------VEVE 234
+ F + V+G+G +G V V +N L++R A K+ + EV
Sbjct: 5 ASDFEEIAVLGQGAFGQV----------VKARNALDSRYYAIKKIRHTEEKLSTILSEVM 54
Query: 235 AIGRVRH-------------KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-VGPH 280
+ + H +N V+ + + + + EY +NG L +H + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ 114
Query: 281 SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--- 337
W + I+ + L+Y+H ++HRD+K NI +D+ N K+ DFGLAK
Sbjct: 115 RDEYWRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 338 ----LLGAERSYV------TTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVI 384
+L + + T +GT YVA E TG NE+ D+YS GI+ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKN 243
F+D IG G +G VY N+ V A+K + + Q+ ++++ EV + ++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL-GTAKGLTYL 302
++ G LV EY G+ L H E+ + + G +GL YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY- 361
H ++HRD+K+ NILL + KL DFG A ++ +V GT ++APE
Sbjct: 132 HSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
Query: 362 --ASTGMLNERSDVYSFGILIMEVISGRNPV 390
G + + DV+S GI +E+ + P+
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 16/213 (7%)
Query: 184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGR 238
+ + F +G+G +G VY E ++ V + + Q EKE + E+E
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLA-REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAH 79
Query: 239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
+ H N++RL Y + L+ EY G L + L T I+ A
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT----ATIMEELADA 135
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
L Y H KV+HRDIK N+LL + K++DFG + + R + GT Y+
Sbjct: 136 LMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR---KTMCGTLDYLP 189
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
PE M NE+ D++ G+L E++ G P +
Sbjct: 190 PEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSP------------LTWEIRM 289
N+V LLG C + G M++ E+ GNL +L P LT E +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT- 348
AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + + V
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL+ NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 179
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 234
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 142
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 197
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV + VL NVAVK L N+ A++ ++ E+ + V HKN++ L
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISL 86
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q +H ++ H +++ ++ G+ +
Sbjct: 87 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELD-HERMSY-----LLYQMLCGIKH 139
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ A +++ T + T Y APE
Sbjct: 140 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEV 194
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E++ G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 140
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 141 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 195
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 196 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 231
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 193 VIGEGGYGIVYH--GVLEDNT------NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNL 244
V+G+GGYG V+ V NT V K ++ + K E + V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLH--GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
V L+ G L+ EY+ G L L G + + +++ LG +L
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H+ +++RD+K NI+L+ Q + KL+DFGL K VT GT Y+APE
Sbjct: 138 HQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEIL 193
Query: 363 STGMLNERSDVYSFGILIMEVISGRNP 389
N D +S G L+ ++++G P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 23/228 (10%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVL-----EDNT-NVAVKNLLNNRGQAEKE-FKVEVE 234
E N +G G +G V ED VAVK L + EKE E++
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-----DVGP-----HSPL 283
+ + +H+N+V LLG C G +++ EY G+L +L + P +S
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+ ++ A+G+ +L +HRD+ + N+LL K+ DFGLA+ + +
Sbjct: 162 STRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 344 SYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
+Y+ ++APE + +SDV+S+GIL+ E+ S G NP
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 120
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y APE
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 226 VWPGVTSMP 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 134
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 189
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 190 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 142
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 143 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 197
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 198 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 135
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 190
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL + NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 135
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 190
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 191 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 226
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL+ NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVIS------GRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y VL+ NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 179
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 180 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 234
Query: 362 ASTGMLNERSDVYSFGILIMEVI------SGRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 235 ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 270
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 122
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y APE
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 177
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 227
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 228 VWPGVTSMP 236
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L++++ PL + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 120
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y V T Y APE
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILL 175
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 226 VWPGVTSMP 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 143
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ + T Y APE
Sbjct: 144 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMVPFVVTRYYRAPEV 198
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
E D++S G ++ E+I G
Sbjct: 199 ILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+GEG +G V D TN VAVK L G Q ++ E+E + + H+++V+
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 247 LLGYCAEGAHR--MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C + + LV EY+ G+L +L P + + +G+ YLH
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHA 130
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+HR + + N+LLD K+ DFGLAK + Y R G F Y APE
Sbjct: 131 ---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 186
Query: 362 ASTGMLNERSDVYSFGILIMEVIS 385
SDV+SFG+ + E+++
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 21/219 (9%)
Query: 184 STNGFAD----ENVIGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEA 235
ST F+D + V+G+G +G + + V V + + + +KE + EV+
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++ H N+++L + + + LV E G L ++ + II
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQV 141
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
G+TY+H+ K+VHRD+K N+LL+ K N ++ DFGL+ A + +G
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--MKDKIG 196
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T Y+APE G +E+ DV+S G+++ ++SG P +
Sbjct: 197 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 25/274 (9%)
Query: 188 FADENVIGEGGYGIVYHG-VLEDNTNVAVK-----NLLNNRGQAEKEFKVEVEAIGRVRH 241
F E IG G + VY L D VA+K +L++ + +A+ E++ + ++ H
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD--CIKEIDLLKQLNH 91
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
N+++ E +V E D G+L + + + + L +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
+H +V+HRDIK +N+ + KL D GL + + ++ ++GT Y++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMSPER 207
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR 421
N +SD++S G L+ E+ + ++P Y ++NL K + E P
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPF-YG---DKMNLYSLCKKI------EQCDYPP 257
Query: 422 LQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHV 455
L P C++P+ KRP + +V
Sbjct: 258 L---PSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 194 IGEGGYGIVYHGVLEDNTN------VAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR 246
+GEG +G V D TN VAVK L G Q ++ E+E + + H+++V+
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 247 LLGYCAEGAHR--MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
G C + + LV EY+ G+L +L P + + +G+ YLH
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHA 129
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGYVAPEY 361
+HR + + N+LLD K+ DFGLAK + Y R G F Y APE
Sbjct: 130 ---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 185
Query: 362 ASTGMLNERSDVYSFGILIMEVIS 385
SDV+SFG+ + E+++
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFK---VEVEA 235
++++ F ++G+G +G V+ + N A+K L + + + + VE
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 236 IGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMN 290
+ H L + + V EY++ G+L + D+ + EI +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL- 129
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTT 348
GL +LH +V+RD+K NILLDK + K++DFG+ K +LG + T
Sbjct: 130 -------GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TN 176
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
GT Y+APE N D +SFG+L+ E++ G++P
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKV--EVEAIGRV 239
++T+ + IG G YG VY + + VA+K++ G+ EV + R+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 240 R---HKNLVRLLGYCAEG-----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
H N+VRL+ CA LV+E++D +L +L D P L E ++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 117
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
+ +GL +LH +VHRD+K NIL+ KL+DFGLA++ + + V+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--DPVV 172
Query: 352 GTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
T Y APE D++S G + E+ R P+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 187 GFADENVI-----GEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEKE-FKVEVEAI 236
G A E+V+ GEG +G VY GV + NVAVK + KE F E +
Sbjct: 4 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 63
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
+ H ++V+L+G E ++ E G L +L + LT + L
Sbjct: 64 KNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYS---LQIC 119
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
K + YL VHRDI NIL+ KL DFGL++ + E Y + +
Sbjct: 120 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 176
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++PE + SDV+ F + + E++S G+ P
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 25/222 (11%)
Query: 180 ELEVSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFK---VEVEA 235
++++ F ++G+G +G V+ + N A+K L + + + + VE
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 236 IGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMN 290
+ H L + + V EY++ G+L + D+ + EI +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL- 130
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTT 348
GL +LH +V+RD+K NILLDK + K++DFG+ K +LG + T
Sbjct: 131 -------GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TN 177
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
GT Y+APE N D +SFG+L+ E++ G++P
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNL-LNNRGQAEKEFKV-EVEAIGRVRHKNL 244
F IGEG YG+VY + VA+K + L+ + + E+ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
V+LL LV+E++ + +L+ ++ PL + + + +GL + H
Sbjct: 64 VKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPL--PLIKSYLFQLLQGLAFCHS 120
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE--- 360
+V+HRD+K N+L++ + KL+DFGLA+ G R+Y T + T Y APE
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 361 ---YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV 417
Y ST + D++S G + E+++ R + PG+ + + + T + V
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR-----ALFPGDSEIDQLFRIFRTLGTPDEV 225
Query: 418 LDPRLQEKP 426
+ P + P
Sbjct: 226 VWPGVTSMP 234
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 187 GFADENVI-----GEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEKE-FKVEVEAI 236
G A E+V+ GEG +G VY GV + NVAVK + KE F E +
Sbjct: 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 67
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
+ H ++V+L+G E ++ E G L +L + LT + L
Sbjct: 68 KNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYS---LQIC 123
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
K + YL VHRDI NIL+ KL DFGL++ + E Y + +
Sbjct: 124 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 180
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++PE + SDV+ F + + E++S G+ P
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 187 GFADENVI-----GEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEKE-FKVEVEAI 236
G A E+V+ GEG +G VY GV + NVAVK + KE F E +
Sbjct: 20 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIM 79
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
+ H ++V+L+G E ++ E G L +L + LT + L
Sbjct: 80 KNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYS---LQIC 135
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
K + YL VHRDI NIL+ KL DFGL++ + E Y + +
Sbjct: 136 KAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 192
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
++PE + SDV+ F + + E++S G+ P
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 23/286 (8%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVR 240
++ + + + VIG G +V VA+K + + Q E E++A+ +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV--GPHSP--LTWEIRMNIILGTA 296
H N+V LV + + G++ + V G H L I+
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA----ERSYVTTRVMG 352
+GL YLH+ + +HRD+K+ NILL + + +++DFG++ L R+ V +G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 353 TFGYVAPEYA-STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN 411
T ++APE + ++D++SFGI +E+ +G P + PP +V M+T
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKV-------LMLTL 240
Query: 412 RNAEGVLDPRLQEKP-CSXXXXXXXXXXXXCVDPNAHKRPKMGHVI 456
+N L+ +Q+K C+ + KRP ++
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 23/286 (8%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAE-KEFKVEVEAIGRVR 240
++ + + + VIG G +V VA+K + + Q E E++A+ +
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV--GPHSP--LTWEIRMNIILGTA 296
H N+V LV + + G++ + V G H L I+
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA----ERSYVTTRVMG 352
+GL YLH+ + +HRD+K+ NILL + + +++DFG++ L R+ V +G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 353 TFGYVAPEYA-STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN 411
T ++APE + ++D++SFGI +E+ +G P + PP +V M+T
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY-HKYPPMKV-------LMLTL 235
Query: 412 RNAEGVLDPRLQEKP-CSXXXXXXXXXXXXCVDPNAHKRPKMGHVI 456
+N L+ +Q+K C+ + KRP ++
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G +G VY ++ +A ++ + + E E + VE+E + H +V+LLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 253 EGAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
++ E+ G ++ L D G P + ++ + L +LH +++
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML----EALNFLHSK---RII 131
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLA----KLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
HRD+K+ N+L+ + + +L+DFG++ K L S++ GT ++APE +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 186
Query: 368 NE-----RSDVYSFGILIMEVISGRNP 389
+ ++D++S GI ++E+ P
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 100/207 (48%), Gaps = 23/207 (11%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G +G VY ++ +A ++ + + E E + VE+E + H +V+LLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 253 EGAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV 311
++ E+ G ++ L D G P + ++ + L +LH +++
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML----EALNFLHSK---RII 139
Query: 312 HRDIKSSNILLDKQWNPKLSDFGLA----KLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
HRD+K+ N+L+ + + +L+DFG++ K L S++ GT ++APE +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 194
Query: 368 NE-----RSDVYSFGILIMEVISGRNP 389
+ ++D++S GI ++E+ P
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 124 PASGRNRIHIEIGKDHRIAYPERAAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEV 183
P SGR R + + A GS S D+ + +T V+ G G R EV
Sbjct: 2 PMSGRPRT-TSFAESCKPVQQPSAFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEV 56
Query: 184 STNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFK-VEVEAIGRVRH 241
S + D VIG G +G+VY L D+ VA+K +L +K FK E++ + ++ H
Sbjct: 57 S---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDH 108
Query: 242 KNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
N+VRL + + LV +Y+ H + +++ +
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQL 167
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVTTRVM 351
+ L Y+H + HRDIK N+LLD KL DFG AK L SY+ +R
Sbjct: 168 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 352 GTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV 409
Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 224 ----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLG 276
Query: 410 T 410
T
Sbjct: 277 T 277
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS 318
+ E++D G+L+Q L + EI + + +GL YL E + +++HRD+K S
Sbjct: 91 ICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPS 144
Query: 319 NILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGI 378
NIL++ + KL DFG++ G + +GT Y+APE + +SD++S G+
Sbjct: 145 NILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGL 201
Query: 379 LIMEVISGRNPVDYSRPPGEVNLVEWL 405
++E+ GR P+ PP + +E +
Sbjct: 202 SLVELAVGRYPI----PPPDAKELEAI 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 183 VSTNGFADENVIGEGGYG-IVYHGVLEDNTNVAVKNLL-NNRGQAEKEFKVEVEAIGRVR 240
V F ++V+G G G IVY G+ DN +VAVK +L A++E ++ E+
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRES---DE 76
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYID--NGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
H N++R +C E R Y I+ L++++ H L + ++ T G
Sbjct: 77 HPNVIRY--FCTE-KDRQFQYIAIELCAATLQEYVEQKDFAHLGLE---PITLLQQTTSG 130
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDK-----QWNPKLSDFGLAKLLGAERSYVTTR--VM 351
L +LH +VHRD+K NIL+ + +SDFGL K L R + R V
Sbjct: 131 LAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 352 GTFGYVAPEYASTGMLNERS---DVYSFGILIMEVIS-GRNP 389
GT G++APE S + D++S G + VIS G +P
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 28/252 (11%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AAG+ G GD A TP + + + ++ + + V+G+G +G +
Sbjct: 21 AAGTSGGPGDHLHA---TPGM--------FVQHSTAIFSDRYKGQRVLGKGSFGEVILCK 69
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE 262
+ V V + + + +KE + EV+ + ++ H N+++L + + + LV E
Sbjct: 70 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 129
Query: 263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL 322
G L ++ + II G+TY+H+ K+VHRD+K N+LL
Sbjct: 130 VYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 182
Query: 323 D---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 379
+ K N ++ DFGL+ A + +GT Y+APE G +E+ DV+S G++
Sbjct: 183 ESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVI 239
Query: 380 IMEVISGRNPVD 391
+ ++SG P +
Sbjct: 240 LYILLSGCPPFN 251
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 35/289 (12%)
Query: 194 IGEGGYGIV--YHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC 251
+GEGG+ V G L D A+K +L + Q +E + E + H N++RL+ YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 252 AE--GAHR--MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
GA L+ + G L + + LT + + ++LG +GL +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA--- 152
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKL----LGAERSYVTTRVMG----TFGYVAP 359
HRD+K +NILL + P L D G + R +T + T Y AP
Sbjct: 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP 212
Query: 360 EYAST---GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG 416
E S +++ER+DV+S G ++ ++ G P D G+ + V N+ +
Sbjct: 213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-----VALAVQNQLS-- 265
Query: 417 VLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIHMLEAEEFP 465
+ + P VDP H+RP + ++ LEA + P
Sbjct: 266 -----IPQSPRHSSALWQLLNSMMTVDP--HQRPHIPLLLSQLEALQPP 307
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 28/252 (11%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AAG+ G GD A TP + + + ++ + + V+G+G +G +
Sbjct: 22 AAGTSGGPGDHLHA---TPGM--------FVQHSTAIFSDRYKGQRVLGKGSFGEVILCK 70
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE 262
+ V V + + + +KE + EV+ + ++ H N+++L + + + LV E
Sbjct: 71 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 130
Query: 263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL 322
G L ++ + II G+TY+H+ K+VHRD+K N+LL
Sbjct: 131 VYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLL 183
Query: 323 D---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGIL 379
+ K N ++ DFGL+ A + +GT Y+APE G +E+ DV+S G++
Sbjct: 184 ESKSKDANIRIIDFGLSTHFEASKKMKDK--IGTAYYIAPEVLH-GTYDEKCDVWSTGVI 240
Query: 380 IMEVISGRNPVD 391
+ ++SG P +
Sbjct: 241 LYILLSGCPPFN 252
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLN------NRGQAEKEFKVEVEAIGRVRHKNL 244
IG G YG+V VA+K + N N + +E K+ + +H N+
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI----LKHFKHDNI 116
Query: 245 VRL---LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ + L VY +D +E LH + PLT E + +GL Y
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDL--MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG---AERSYVTTRVMGTFGYVA 358
+H +V+HRD+K SN+L+++ K+ DFG+A+ L AE Y T + T Y A
Sbjct: 175 MHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 359 PEYA-STGMLNERSDVYSFGILIMEVISGRN 388
PE S + D++S G + E+++ R
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 107/202 (52%), Gaps = 19/202 (9%)
Query: 192 NVIGEGGYGIVYHGVLEDNTN--VAVKNL-LNNRGQAE----KEFKVEVEAIGRVRHKNL 244
+ +GEG + VY + NTN VA+K + L +R +A+ + E++ + + H N+
Sbjct: 16 DFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
+ LL ++ LV+++++ +LE + + +P + M L T +GL YLH+
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM---LMTLQGLEYLHQ 130
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYA- 362
++HRD+K +N+LLD+ KL+DFGLAK G+ R+Y V T Y APE
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLF 185
Query: 363 STGMLNERSDVYSFGILIMEVI 384
M D+++ G ++ E++
Sbjct: 186 GARMYGVGVDMWAVGCILAELL 207
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 21/217 (9%)
Query: 184 STNGFAD----ENVIGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEA 235
ST F+D + V+G+G +G + + V V + + + +KE + EV+
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++ H N+++L + + + LV E G L ++ + II
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQV 135
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
G+TY+H+ K+VHRD+K N+LL+ K N ++ DFGL+ A + +G
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK--IG 190
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
T Y+APE G +E+ DV+S G+++ ++SG P
Sbjct: 191 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 82
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 135
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 136 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 190
Query: 362 ASTGMLNERSDVYSFGILIMEVIS------GRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 191 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL--LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
IGEG YG+V Y V T VA+K + ++ ++ + E++ + R RH+N++ +
Sbjct: 51 IGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIR 107
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
+ YI +E L+ + L+ + + +GL Y+H
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSA--- 163
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPEYASTGM 366
V+HRD+K SN+L++ + K+ DFGLA++ E + T + T Y APE M
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI----M 219
Query: 367 LNERS-----DVYSFGILIMEVISGR 387
LN + D++S G ++ E++S R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHK 242
T+G+ + IG G Y + + + N AVK + +++++ E+E + R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEEIEILLRYGQHP 76
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGLTY 301
N++ L +G + +V E + G L D E + +L T K + Y
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELL-----DKILRQKFFSEREASAVLFTITKTVEY 131
Query: 302 LHEGLEPKVVHRDIKSSNIL-LDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
LH VVHRD+K SNIL +D+ NP ++ DFG AK L AE + T T +V
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFV 187
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNP 389
APE + D++S G+L+ +++G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 193 VIGEGGYGIVYHG---VLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
++G+G +G V + + V V N + + + EVE + ++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ + +V E G L ++ + II G+TY+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 310 VVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
+VHRD+K NILL +K + K+ DFGL+ + + + R+ GT Y+APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPE-VLRGT 198
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+E+ DV+S G+++ ++SG P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 93
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 146
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ T + T Y APE
Sbjct: 147 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMTPYVVTRYYRAPEV 201
Query: 362 ASTGMLNERSDVYSFGILIMEVIS------GRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 202 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 193 VIGEGGYGIVYHG---VLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
++G+G +G V + + V V N + + + EVE + ++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ + +V E G L ++ + II G+TY+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 310 VVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
+VHRD+K NILL +K + K+ DFGL+ + + + R+ GT Y+APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPE-VLRGT 198
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+E+ DV+S G+++ ++SG P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
E+ + + H N+++L + + LV E+ + G L + + + H + NI
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECDA-ANI 151
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ---WNPKLSDFGLAKLLGAERSYVTT 348
+ G+ YLH+ +VHRDIK NILL+ + N K+ DFGL+ + Y
Sbjct: 152 MKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKLR 206
Query: 349 RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
+GT Y+APE NE+ DV+S G+++ ++ G P
Sbjct: 207 DRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPF 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 198 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 23/211 (10%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLN------NRGQAEKEFKVEVEAIGRVRHKNL 244
IG G YG+V VA+K + N N + +E K+ + +H N+
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKI----LKHFKHDNI 115
Query: 245 VRL---LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+ + L VY +D +E LH + PLT E + +GL Y
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDL--MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG---AERSYVTTRVMGTFGYVA 358
+H +V+HRD+K SN+L+++ K+ DFG+A+ L AE Y T + T Y A
Sbjct: 174 MHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 359 PEYA-STGMLNERSDVYSFGILIMEVISGRN 388
PE S + D++S G + E+++ R
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 42/222 (18%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV---RHKNLVRLL- 248
+IG G YG VY G L D VAVK A ++ + + I RV H N+ R +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF----SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 249 ---GYCAEG-AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
A+G +LV EY NG+L ++L H+ W + +GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTS-DWVSSCRLAHSVTRGLAYLHT 129
Query: 305 GL------EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--------GAERSYVTTRV 350
L +P + HRD+ S N+L+ +SDFGL+ L G E + + V
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 351 MGTFGYVAPEYASTGMLNERS--------DVYSFGILIMEVI 384
GT Y+APE G +N R D+Y+ G++ E+
Sbjct: 190 -GTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 83
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 200 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 193 VIGEGGYGIVYHG---VLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
++G+G +G V + + V V N + + + EVE + ++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
+ + +V E G L ++ + II G+TY+H+
Sbjct: 89 ILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HN 141
Query: 310 VVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
+VHRD+K NILL +K + K+ DFGL+ + + + R+ GT Y+APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR-GT 198
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+E+ DV+S G+++ ++SG P
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 45 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 160
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 161 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 218 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 33 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 89
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 148
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 149 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 206 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 198 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVY----HGVLEDNT--NVAVKNLLNNRGQAEKE-FKVEVE 234
E N + +G G +G V +G+++ + VAVK L + E+E E++
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-----VGPHSPLTWEIR 288
+ + H N+V LLG C G +++ EY G+L +L SP E
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 289 M---------NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL 339
+ AKG+ +L +HRD+ + NILL K+ DFGLA+ +
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 211
Query: 340 GAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG 397
+ +YV ++APE + SDV+S+GI + E+ S G +P Y P
Sbjct: 212 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPV 269
Query: 398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH 457
+ + +K EG + P C D + KRP ++
Sbjct: 270 DSKFYKMIK--------EGFRMLSPEHAPAE-----MYDIMKTCWDADPLKRPTFKQIVQ 316
Query: 458 MLEAE 462
++E +
Sbjct: 317 LIEKQ 321
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 35/252 (13%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEK-----EFKVEVEAIGRVRHKNLV 245
+ +G G +G V G + VAVK L NR + + K E++ + RH +++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKIL--NRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+L + +V EY+ G L ++ HG V E R + + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYCH 128
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+ VVHRD+K N+LLD N K++DFGL+ ++ ++ ++ T G+ Y APE S
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC-GSPNYAAPEVIS 183
Query: 364 TGML-NERSDVYSFGILIMEVISGRNPVDYSRPP--------GEVNLVEWLKTMVTNRNA 414
+ D++S G+++ ++ G P D P G + E+L NR+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL-----NRSV 238
Query: 415 EGVLDPRLQEKP 426
+L LQ P
Sbjct: 239 ATLLMHMLQVDP 250
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 198 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 23 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 79
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 138
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 196 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 30 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 86
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 145
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 203 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 31 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 87
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 146
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 147 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 204 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 22 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 78
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 137
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 138 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 195 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 144
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 202 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 23 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 79
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 138
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 139 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 196 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 198 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVY----HGVLEDNT--NVAVKNLLNNRGQAEKE-FKVEVE 234
E N + +G G +G V +G+++ + VAVK L + E+E E++
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-----VGPHSPLTWEIR 288
+ + H N+V LLG C G +++ EY G+L +L SP E
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 289 M---------NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL 339
+ AKG+ +L +HRD+ + NILL K+ DFGLA+ +
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 195
Query: 340 GAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG 397
+ +YV ++APE + SDV+S+GI + E+ S G +P Y P
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPV 253
Query: 398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH 457
+ + +K EG + P C D + KRP ++
Sbjct: 254 DSKFYKMIK--------EGFRMLSPEHAP-----AEMYDIMKTCWDADPLKRPTFKQIVQ 300
Query: 458 MLEAE 462
++E +
Sbjct: 301 LIEKQ 305
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 246 RLLGYCAEGAHRMLV-YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
+L +C + ++ Y NG L +++ +G I+ L YLH
Sbjct: 101 KLY-FCFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHG 155
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 156 K---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 102/238 (42%), Gaps = 55/238 (23%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----------VEVE 234
+ F + V+G+G +G V V +N L++R A K+ + EV
Sbjct: 5 ASDFEEIAVLGQGAFGQV----------VKARNALDSRYYAIKKIRHTEEKLSTILSEVM 54
Query: 235 AIGRVRH-------------KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-VGPH 280
+ + H +N V+ + + + + EY +N L +H + +
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ 114
Query: 281 SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--- 337
W + I+ + L+Y+H ++HRD+K NI +D+ N K+ DFGLAK
Sbjct: 115 RDEYWRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167
Query: 338 ----LLGAERSYV------TTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVI 384
+L + + T +GT YVA E TG NE+ D+YS GI+ E+I
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKYI 144
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 202 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVY----HGVLEDNT--NVAVKNLLNNRGQAEKE-FKVEVE 234
E N + +G G +G V +G+++ + VAVK L + E+E E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-----VGPHSPLTWEIR 288
+ + H N+V LLG C G +++ EY G+L +L SP E
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 289 M---------NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL 339
+ AKG+ +L +HRD+ + NILL K+ DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHI 218
Query: 340 GAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG 397
+ +YV ++APE + SDV+S+GI + E+ S G +P Y P
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPV 276
Query: 398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH 457
+ + +K EG + P C D + KRP ++
Sbjct: 277 DSKFYKMIK--------EGFRMLSPEHAPAE-----MYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 458 MLEAE 462
++E +
Sbjct: 324 LIEKQ 328
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 18/251 (7%)
Query: 144 PERAAGSHHGSGDQTVAAAITPEVSHL-GWGHWYTL---RELEVSTNGFADENVIGEGGY 199
P+ A G TV+ + T + + + YT+ R+ E+ IGEG +
Sbjct: 344 PKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQF 403
Query: 200 GIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCAEG 254
G V+ G+ N VA+K N + +E F E + + H ++V+L+G E
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN 463
Query: 255 AHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ E G L +L V S L I L TA L YL + VHR
Sbjct: 464 P-VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTA--LAYLESK---RFVHR 515
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
DI + N+L+ KL DFGL++ + Y ++ ++APE + SDV
Sbjct: 516 DIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 374 YSFGILIMEVI 384
+ FG+ + E++
Sbjct: 576 WMFGVCMWEIL 586
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 123
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + + F +
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVY----HGVLEDNT--NVAVKNLLNNRGQAEKE-FKVEVE 234
E N + +G G +G V +G+++ + VAVK L + E+E E++
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-----VGPHSPLTWEIR 288
+ + H N+V LLG C G +++ EY G+L +L SP E
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 289 M---------NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL 339
+ AKG+ +L +HRD+ + NILL K+ DFGLA+ +
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 218
Query: 340 GAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG 397
+ +YV ++APE + SDV+S+GI + E+ S G +P Y P
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPV 276
Query: 398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH 457
+ + +K EG + P C D + KRP ++
Sbjct: 277 DSKFYKMIK--------EGFRMLSPEHAPAE-----MYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 458 MLEAE 462
++E +
Sbjct: 324 LIEKQ 328
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 42/305 (13%)
Query: 182 EVSTNGFADENVIGEGGYGIVY----HGVLEDNT--NVAVKNLLNNRGQAEKE-FKVEVE 234
E N + +G G +G V +G+++ + VAVK L + E+E E++
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 235 AIGRV-RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGD-----VGPHSPLTWEIR 288
+ + H N+V LLG C G +++ EY G+L +L SP E
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 289 M---------NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL 339
+ AKG+ +L +HRD+ + NILL K+ DFGLA+ +
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDI 213
Query: 340 GAERSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG 397
+ +YV ++APE + SDV+S+GI + E+ S G +P Y P
Sbjct: 214 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP--YPGMPV 271
Query: 398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSXXXXXXXXXXXXCVDPNAHKRPKMGHVIH 457
+ + +K EG + P C D + KRP ++
Sbjct: 272 DSKFYKMIK--------EGFRMLSPEHAPAE-----MYDIMKTCWDADPLKRPTFKQIVQ 318
Query: 458 MLEAE 462
++E +
Sbjct: 319 LIEKQ 323
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 144
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 202 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEK-----EFKVEVEAIGRVRHKNLV 245
+ +G G +G V G E VAVK L NR + + + E++ + RH +++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKIL--NRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + + +V EY+ G L + + + L + + G+ Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDY----ICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG 365
+ VVHRD+K N+LLD N K++DFGL+ ++ ++ ++ G+ Y APE S
Sbjct: 136 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC-GSPNYAAPEVISGR 190
Query: 366 ML-NERSDVYSFGILIMEVISGRNPVDYSRPP 396
+ D++S G+++ ++ G P D P
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 198 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKV 231
+ R+ E+ IGEG +G V+ G+ N VA+K N + +E F
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMN 290
E + + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 117
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 118 YQLSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 172
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKV 231
+ R+ E+ IGEG +G V+ G+ N VA+K N + +E F
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMN 290
E + + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 120
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 121 YQLSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 175
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEV 233
R+ E+ IGEG +G V+ G+ N VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNII 292
+ + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQ 119
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 120 LSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGV 206
A GS S D+ + +T V+ G G R EVS + D VIG G +G+VY
Sbjct: 22 AFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEVS---YTDTKVIGNGSFGVVYQAK 74
Query: 207 LEDNTN-VAVKNLLNNRGQAEKEFK-VEVEAIGRVRHKNLVRLLGYCAEGAHRM------ 258
L D+ VA+K +L +K FK E++ + ++ H N+VRL + +
Sbjct: 75 LCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS 318
LV +Y+ H + +++ + + L Y+H + HRDIK
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQ 185
Query: 319 NILLDKQWNP-KLSDFGLAKLL---GAERSYVTTRVMGTFGYVAPE--YASTGMLNERSD 372
N+LLD KL DFG AK L SY+ +R Y APE + +T + D
Sbjct: 186 NLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-ID 239
Query: 373 VYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
V+S G ++ E++ G+ P+ + G LVE +K + T
Sbjct: 240 VWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLGT 275
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 127
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGT-FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + YV F +
Sbjct: 128 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 123
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGT-FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + YV F +
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 18/251 (7%)
Query: 144 PERAAGSHHGSGDQTVAAAITPEVSHL-GWGHWYTL---RELEVSTNGFADENVIGEGGY 199
P+ A G TV+ + T + + + YT+ R+ E+ IGEG +
Sbjct: 344 PKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQF 403
Query: 200 GIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGYCAEG 254
G V+ G+ N VA+K N + +E F E + + H ++V+L+G E
Sbjct: 404 GDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN 463
Query: 255 AHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++ E G L +L V S L I L TA L YL + VHR
Sbjct: 464 P-VWIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQLSTA--LAYLESK---RFVHR 515
Query: 314 DIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDV 373
DI + N+L+ KL DFGL++ + Y ++ ++APE + SDV
Sbjct: 516 DIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDV 575
Query: 374 YSFGILIMEVI 384
+ FG+ + E++
Sbjct: 576 WMFGVCMWEIL 586
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKV 231
+ R+ E+ IGEG +G V+ G+ N VA+K N + +E F
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMN 290
E + + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 119
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 120 YQLSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 174
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHK 242
T+G+ + IG G Y + + + N AVK + +++++ E+E + R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEIEILLRYGQHP 76
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT-AKGLTY 301
N++ L +G + +V E G L D E + +L T K + Y
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELL-----DKILRQKFFSEREASAVLFTITKTVEY 131
Query: 302 LHEGLEPKVVHRDIKSSNIL-LDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
LH VVHRD+K SNIL +D+ NP ++ DFG AK L AE + T T +V
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFV 187
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNP 389
APE + D++S G+L+ ++G P
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 125 ASGRNRIHIEIGKDHRIAYPERAAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVS 184
+SGR R + + A GS S D+ + +T V+ G G R EVS
Sbjct: 5 SSGRPRT-TSFAESCKPVQQPSAFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEVS 59
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFK-VEVEAIGRVRHK 242
+ D VIG G +G+VY L D+ VA+K +L +K FK E++ + ++ H
Sbjct: 60 ---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHC 111
Query: 243 NLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
N+VRL + + LV +Y+ H + +++ +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLF 170
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVTTRVMG 352
+ L Y+H + HRDIK N+LLD KL DFG AK L SY+ +R
Sbjct: 171 RSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 353 TFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K + T
Sbjct: 226 ---YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLGT 279
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 127
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGT-FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + YV F +
Sbjct: 128 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 123
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGT-FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + YV F +
Sbjct: 124 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 133
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGT--FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + + F +
Sbjct: 134 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGV 206
A GS S D+ + +T V+ G G R EVS + D VIG G +G+VY
Sbjct: 16 AFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEVS---YTDTKVIGNGSFGVVYQAK 68
Query: 207 LEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM------L 259
L D+ VA+K +L ++ +E ++ + ++ H N+VRL + + L
Sbjct: 69 LCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 124
Query: 260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSN 319
V +Y+ H + +++ + + L Y+H + HRDIK N
Sbjct: 125 VLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQN 180
Query: 320 ILLDKQWNP-KLSDFGLAKLL---GAERSYVTTRVMGTFGYVAPE--YASTGMLNERSDV 373
+LLD KL DFG AK L SY+ +R Y APE + +T + DV
Sbjct: 181 LLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-IDV 234
Query: 374 YSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
+S G ++ E++ G+ P+ + G LVE +K + T
Sbjct: 235 WSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLGT 269
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNLLNNRGQAEKEFKV-EVEAIGRVRHKN 243
+ + + IGEG YG+V DN N VA+K + Q + + E++ + R RH+N
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++ + + YI +E L+ + L+ + + +GL Y+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPEY 361
V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 146 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 362 ASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 203 ----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 194 IGEGGYGIVYHGVLE----DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+G+G +G+V G + +VAVK L + ++ +A +F EV A+ + H+NL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT--------AKG 298
L G +M V E G+L L G + +LGT A+G
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQG-----------HFLLGTLSRYAVQVAEG 133
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA-ERSYVTTRVMGT-FGY 356
+ YL + +HRD+ + N+LL + K+ DFGL + L + YV F +
Sbjct: 134 MGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
APE T + SD + FG+ + E+ + G+ P
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKV 231
+ R+ E+ IGEG +G V+ G+ N VA+K N + +E F
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMN 290
E + + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 122
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 123 YQLSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 177
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 14/214 (6%)
Query: 177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKV 231
+ R+ E+ IGEG +G V+ G+ N VA+K N + +E F
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMN 290
E + + H ++V+L+G E ++ E G L +L V +S L I
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYA 145
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 146 YQLSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 200
Query: 351 MGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 27/205 (13%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV + VL NVAVK L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E LV E +D NL Q +H ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ A +++ T + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVISG 386
D++S G ++ E++ G
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 38/278 (13%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGV 206
A GS S D+ + +T V+ G G R EVS + D VIG G +G+VY
Sbjct: 67 AFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEVS---YTDTKVIGNGSFGVVYQAK 119
Query: 207 LEDNTN-VAVKNLLNNRGQAEKEFK-VEVEAIGRVRHKNLVRLLGYCAEGAHRM------ 258
L D+ VA+K +L +K FK E++ + ++ H N+VRL + +
Sbjct: 120 LCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 174
Query: 259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS 318
LV +Y+ H + +++ + + L Y+H + HRDIK
Sbjct: 175 LVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQ 230
Query: 319 NILLDKQWNP-KLSDFGLAKLL---GAERSYVTTRVMGTFGYVAPE--YASTGMLNERSD 372
N+LLD KL DFG AK L SY+ +R Y APE + +T + D
Sbjct: 231 NLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSS-ID 284
Query: 373 VYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
V+S G ++ E++ G+ P+ + G LVE +K + T
Sbjct: 285 VWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLGT 320
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 129
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 130 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 184 STNGFAD----ENVIGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-EVEA 235
ST F+D + V+G+G +G + + V V + + + +KE + EV+
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 236 IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++ H N+ +L + + + LV E G L ++ + II
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQV 135
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
G+TY H+ K+VHRD+K N+LL+ K N ++ DFGL+ A + +G
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK--XKDKIG 190
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
T Y+APE G +E+ DV+S G+++ ++SG P
Sbjct: 191 TAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA++ + ++ ++ + E++ + R RH+
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 144
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 202 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVIS------GRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 61/295 (20%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNL----------------------- 218
V N + ++ IG+G YG+V E DNT A+K L
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 219 ----LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG--AHRMLVYEYIDNGNLEQW 272
+ RG E+ ++ E+ + ++ H N+V+L+ + H +V+E ++ G + +
Sbjct: 70 PGGCIQPRGPIEQVYQ-EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME- 127
Query: 273 LHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD 332
V PL+ + KG+ YLH K++HRDIK SN+L+ + + K++D
Sbjct: 128 ----VPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIAD 180
Query: 333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG---MLNERSDVYSFGILIMEVISGRNP 389
FG++ + ++ V GT ++APE S + DV++ G+ + + G+ P
Sbjct: 181 FGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
Query: 390 VDYSRP--------------PGEVNLVEWLKTMVT---NRNAEG-VLDPRLQEKP 426
R P + ++ E LK ++T ++N E ++ P ++ P
Sbjct: 240 FMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 126
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 127 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 128
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 129 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
++ SD+++ G +I ++++G P
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVK-----NLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG+G + +V + E AVK ++ G + ++ K E ++H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 247 LLGYCAEGAHRMLVYEYIDNGNL--EQWLHGDVG-PHSPLTWEIRMNIILGTAKGLTYLH 303
LL + +V+E++D +L E D G +S M IL + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL---EALRYCH 147
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+ ++HRD+K N+LL + N KL DFG+A LG E V +GT ++APE
Sbjct: 148 DN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVGTPHFMAPE 203
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ DV+ G+++ ++SG P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 127
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 128 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGRVRHKNLVRLL 248
+GEG YG+VY VA+K + R AE E E+ + + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
LV+E+++ +L++ L + +I + +L +G+ + H+
Sbjct: 86 DVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL---RGVAHCHQH--- 138
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE-YASTGM 366
+++HRD+K N+L++ KL+DFGLA+ G RSY T + T Y AP+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKK 196
Query: 367 LNERSDVYSFGILIMEVISGR 387
+ D++S G + E+I+G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 14/198 (7%)
Query: 193 VIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRL 247
IGEG +G V+ G+ N VA+K N + +E F E + + H ++V+L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNIILGTAKGLTYLHEGL 306
+G E ++ E G L +L V +S L I L TA L YL
Sbjct: 74 IGVITENP-VWIIMELCTLGELRSFLQ--VRKYSLDLASLILYAYQLSTA--LAYLESK- 127
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
+ VHRDI + N+L+ KL DFGL++ + Y ++ ++APE +
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 367 LNERSDVYSFGILIMEVI 384
SDV+ FG+ + E++
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 29 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 81
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 82 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 140
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVT 347
+ + L Y+H + HRDIK N+LLD KL DFG AK L SY+
Sbjct: 141 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 348 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
+R Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +
Sbjct: 198 SRY-----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEII 249
Query: 406 KTMVT 410
K + T
Sbjct: 250 KVLGT 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 149
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 150 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 152
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 153 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 21 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 73
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 74 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 132
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVT 347
+ + L Y+H + HRDIK N+LLD KL DFG AK L SY+
Sbjct: 133 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 348 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
+R Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +
Sbjct: 190 SRY-----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEII 241
Query: 406 KTMVT 410
K + T
Sbjct: 242 KVLGT 246
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGRVRHKNLVRLL 248
+GEG YG+VY VA+K + R AE E E+ + + H N+V L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSLI 85
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
LV+E+++ +L++ L + +I + +L +G+ + H+
Sbjct: 86 DVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL---RGVAHCHQH--- 138
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPE-YASTGM 366
+++HRD+K N+L++ KL+DFGLA+ G RSY T + T Y AP+ +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKK 196
Query: 367 LNERSDVYSFGILIMEVISGR 387
+ D++S G + E+I+G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 152
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 153 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L + +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVT 347
+ + L Y+H + HRDIK N+LLD KL DFG AK L SY+
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 348 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
+R Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +
Sbjct: 185 SRY-----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEII 236
Query: 406 KTMVT 410
K + T
Sbjct: 237 KVLGT 241
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +RH N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AE 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI-LLDKQW-NP--KLSDFGL 335
LT + + G+ YLH ++ H D+K NI LLDK NP KL DFG+
Sbjct: 109 KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + A + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L + +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVT 347
+ + L Y+H + HRDIK N+LLD KL DFG AK L SY+
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 348 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
+R Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +
Sbjct: 185 SRY-----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEII 236
Query: 406 KTMVT 410
K + T
Sbjct: 237 KVLGT 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 33/216 (15%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
IG G GIV Y +LE NVA+K L N+ A++ ++ E+ + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 248 LGYCA------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
L E +V E +D NL Q + ++ H +++ ++ G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELD-HERMSY-----LLYQMLCGIKH 141
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
LH ++HRD+K SNI++ K+ DFGLA+ G S++ + T Y APE
Sbjct: 142 LHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMMEPEVVTRYYRAPEV 196
Query: 362 ASTGMLNERSDVYSFGILIMEVIS------GRNPVD 391
E D++S G ++ E++ GR+ +D
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +RH N++ L +L+ E + G L +L
Sbjct: 46 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AE 101
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI-LLDKQW-NP--KLSDFGL 335
LT + + G+ YLH ++ H D+K NI LLDK NP KL DFG+
Sbjct: 102 KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + A + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 159 AHKIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 154
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 155 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEV 233
R+ E+ IGEG +G V+ G+ N VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNII 292
+ + H ++V+L+G E ++ E G L +L V S L I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQ 119
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
L TA L YL + VHRDI + N+L+ KL DFGL++ + Y ++
Sbjct: 120 LSTA--LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 174
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 19/239 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE---FKVEVEAIGRVRHKNLVRLLGY 250
IG G + VY G+ + T L +R + E FK E E + ++H N+VR
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 251 ---CAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+G + LV E +G L+ +L ++ + KGL +LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLK----RFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 307 EPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG 365
P ++HRD+K NI + + K+ D GLA L +R+ V+GT + APE
Sbjct: 150 -PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEEK 205
Query: 366 MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE 424
+E DVY+FG +E + P YS + + + V + + V P ++E
Sbjct: 206 Y-DESVDVYAFGXCXLEXATSEYP--YSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 228 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNL----EQWLHGDVGPHSPL 283
+FK E++ I ++++ + G ++YEY++N ++ E + D +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
++ II +Y+H E + HRD+K SNIL+DK KLSDFG E
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG-------ES 199
Query: 344 SYVTTRVM----GTFGYVAPEYAS--TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPG 397
Y+ + + GT+ ++ PE+ S + + D++S GI + + N V +S
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY--VMFYNVVPFSL--- 254
Query: 398 EVNLVEWLKTMVTNRNAEGVLD 419
+++LVE + T +N E LD
Sbjct: 255 KISLVELFNNIRT-KNIEYPLD 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 133
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 134 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 32/245 (13%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLL---GAERSYVT 347
+ + L Y+H + HRDIK N+LLD KL DFG AK L SY+
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 348 TRVMGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL 405
+R Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +
Sbjct: 185 SRY-----YRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEII 236
Query: 406 KTMVT 410
K + T
Sbjct: 237 KVLGT 241
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 222 RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS 281
RG + +E + EV + +RH N++ L +L+ E + G L +L
Sbjct: 69 RGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKE 124
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI-LLDKQW-NP--KLSDFGLAK 337
LT + + G+ YLH ++ H D+K NI LLDK NP KL DFG+A
Sbjct: 125 SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+ A + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 182 KIEAGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 29 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 144
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + + T Y APE
Sbjct: 145 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 202 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 30 YTNLSYIGEGAYGMVCSAY--DNLNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 86
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 145
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + + T Y APE
Sbjct: 146 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 203 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
+L + Y NG L +++ +G I+ L YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 151
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAST 364
++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 152 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 365 GMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + RH+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 200 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 192 NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEK-----EFKVEVEAIGRVRHKNLV 245
+ +G G +G V G + VAVK L NR + + K E++ + RH +++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKIL--NRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+L + +V EY+ G L ++ HG V E R + + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE-----EMEAR-RLFQQILSAVDYCH 128
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+ VVHRD+K N+LLD N K++DFGL+ ++ ++ ++ G+ Y APE S
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC-GSPNYAAPEVIS 183
Query: 364 TGML-NERSDVYSFGILIMEVISGRNPVDYSRPP--------GEVNLVEWLKTMVTNRNA 414
+ D++S G+++ ++ G P D P G + E+L NR+
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL-----NRSV 238
Query: 415 EGVLDPRLQEKP 426
+L LQ P
Sbjct: 239 ATLLMHMLQVDP 250
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 148
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 149 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 16/180 (8%)
Query: 213 VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQW 272
+A K L G E E V + +++H N+V L G H L+ + + G L
Sbjct: 51 IAKKALEGKEGSMENEIAV----LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL--- 103
Query: 273 LHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNIL---LDKQWNPK 329
+ T +I + YLH+ +VHRD+K N+L LD+
Sbjct: 104 -FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIM 159
Query: 330 LSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+SDFGL+K+ + V + GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 160 ISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G YG V+ G + NVAVK + ++R + + E+ +RH+N++ +
Sbjct: 15 CVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 253 EGAHR----MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-- 306
H L+ Y + G+L +L + L + I+L A GL +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 307 ---EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT----RVMGTFGYVAP 359
+P + HRD+KS NIL+ K ++D GLA + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 360 EYASTGMLNE------RSDVYSFGILIMEV 383
E + + R D+++FG+++ EV
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + +V L + A+K L + KE KV E + + R+ H V
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 148
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 149 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G YG V+ G + NVAVK + ++R + + E+ +RH+N++ +
Sbjct: 15 CVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 253 EGAHR----MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-- 306
H L+ Y + G+L +L + L + I+L A GL +LH +
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 307 ---EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT----RVMGTFGYVAP 359
+P + HRD+KS NIL+ K ++D GLA + + + RV GT Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 360 EYASTGMLNE------RSDVYSFGILIMEV 383
E + + R D+++FG+++ EV
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G YG V+ G + NVAVK + ++R + + E+ +RH+N++ +
Sbjct: 44 CVGKGRYGEVWRGSWQ-GENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 253 EGAHR----MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-- 306
H L+ Y + G+L +L + L + I+L A GL +LH +
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 307 ---EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT----RVMGTFGYVAP 359
+P + HRD+KS NIL+ K ++D GLA + + + RV GT Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 215
Query: 360 EYASTGMLNE------RSDVYSFGILIMEV 383
E + + R D+++FG+++ EV
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + R RH+
Sbjct: 45 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 243 NLV----RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKG 298
N++ + E + + ++ +L + L + + + + +G
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRG 156
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGY 356
L Y+H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y
Sbjct: 157 LKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 357 VAPEYASTGMLNERS-----DVYSFGILIMEVISGR 387
APE MLN + D++S G ++ E++S R
Sbjct: 214 RAPEI----MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 192 NVIGEGGYGIVYHGVLEDNTN---VAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRL 247
+V+G G + V + ED VA+K + + E + E+ + +++H N+V L
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
G H L+ + + G L + T +I + YLH+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD--- 134
Query: 308 PKVVHRDIKSSNIL---LDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST 364
+VHRD+K N+L LD+ +SDFGL+K+ + V + GT GYVAPE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 365 GMLNERSDVYSFGILIMEVISGRNP 389
++ D +S G++ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 192 NVIGEGGYGIVYHGVLEDNTN---VAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRL 247
+V+G G + V + ED VA+K + + E + E+ + +++H N+V L
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
G H L+ + + G L + T +I + YLH+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD--- 134
Query: 308 PKVVHRDIKSSNIL---LDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST 364
+VHRD+K N+L LD+ +SDFGL+K+ + V + GT GYVAPE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 365 GMLNERSDVYSFGILIMEVISGRNP 389
++ D +S G++ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G YG V+ G VAVK +A + E+ +RH+N++ + +
Sbjct: 45 IGKGRYGEVWMGKWRGE-KVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 254 GA----HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL--- 306
G L+ +Y +NG+L +L + L + + + + GL +LH +
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 307 --EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV----TTRVMGTFGYVAPE 360
+P + HRD+KS NIL+ K ++D GLA ++ + V TRV GT Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE 216
Query: 361 YASTGMLNER------SDVYSFGILIMEV----ISGRNPVDYSRP 395
+ +D+YSFG+++ EV +SG +Y P
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 192 NVIGEGGYGI-VYHGVLEDNTNVAVKNLLNNRGQAEKEFKV-----EVEAIGRVRHKNLV 245
++GEG + V L + A+K L + KE KV E + + R+ H V
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-E 304
+L + Y NG L +++ +G I+ L YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVS---ALEYLHGK 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAPEYAS 363
G ++HRD+K NILL++ + +++DFG AK+L E + +GT YV+PE +
Sbjct: 150 G----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPV 390
+ SD+++ G +I ++++G P
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN---VAVKNL--LNNRGQAEKEFKVEVEAIGRVRHK 242
+ + + IGEG YG+V DN N VA+K + ++ ++ + E++ + RH+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY--DNVNKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 243 NLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
N++ + + YI +E L+ + L+ + + +GL Y+
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV--TTRVMGTFGYVAPE 360
H V+HRD+K SN+LL+ + K+ DFGLA++ + + T + T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 361 YASTGMLNERS-----DVYSFGILIMEVISGR 387
MLN + D++S G ++ E++S R
Sbjct: 200 I----MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 32/275 (11%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGV 206
A GS S D+ + +T V+ G G R EVS + D VIG G +G+VY
Sbjct: 22 AFGSMKVSRDKD-GSKVTTVVATPGQGPD---RPQEVS---YTDTKVIGNGSFGVVYQAK 74
Query: 207 LEDNTN-VAVKNLLNNRGQAEKEFK-VEVEAIGRVRHKNLVRLLGYCAEGAHRM------ 258
L D+ VA+K +L +K FK E++ + ++ H N+VRL + +
Sbjct: 75 LCDSGELVAIKKVLQ-----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS 318
LV +Y+ H + +++ + + L Y+H + HRDIK
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLAYIHSF---GICHRDIKPQ 185
Query: 319 NILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE--YASTGMLNERSDVYS 375
N+LLD KL DFG AK L R + + Y APE + +T + DV+S
Sbjct: 186 NLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIFGATDYTSS-IDVWS 242
Query: 376 FGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
G ++ E++ G+ P+ + G LVE +K + T
Sbjct: 243 AGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVLGT 275
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 192 NVIGEGGYGIVY--HGVLEDNT------NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN 243
V+G+G +G V+ V ++ V K L R + K+E + + V H
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT--KMERDILADVNHPF 91
Query: 244 LVRL-LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
+V+L + EG L+ +++ G+L L +V T E + A GL +L
Sbjct: 92 VVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALGLDHL 146
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
H +++RD+K NILLD++ + KL+DFGL+K + GT Y+APE
Sbjct: 147 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVV 202
Query: 363 STGMLNERSDVYSFGILIMEVISGRNPV 390
+ + +D +S+G+L+ E+++G P
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 192 NVIGEGGYGIVYHGVLEDNTN---VAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRL 247
+V+G G + V + ED VA+K + + E + E+ + +++H N+V L
Sbjct: 24 DVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
G H L+ + + G L + T +I + YLH+
Sbjct: 82 DDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD--- 134
Query: 308 PKVVHRDIKSSNIL---LDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST 364
+VHRD+K N+L LD+ +SDFGL+K+ + V + GT GYVAPE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 365 GMLNERSDVYSFGILIMEVISGRNP 389
++ D +S G++ ++ G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLV 245
F V+G G + V+ V + T A+K + + + + E+ + +++H+N+V
Sbjct: 11 FIFMEVLGSGAFSEVFL-VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
L H LV + + G L + + G ++ + + +L K YLHE
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAVK---YLHEN 125
Query: 306 LEPKVVHRDIKSSNIL-LDKQWNPKL--SDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
+VHRD+K N+L L + N K+ +DFGL+K+ E++ + + GT GYVAPE
Sbjct: 126 ---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVL 179
Query: 363 STGMLNERSDVYSFGILIMEVISGRNP 389
+ ++ D +S G++ ++ G P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 64/264 (24%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----------VEVE 234
+ F + V+G+G +G V V +N L++R A K+ + EV
Sbjct: 5 ASDFEEIAVLGQGAFGQV----------VKARNALDSRYYAIKKIRHTEEKLSTILSEVX 54
Query: 235 AIGRVRHKNLVRLLGYCAEGAHRMLV---------------YEYIDNGNLEQWLHGD-VG 278
+ + H+ +VR Y A R V EY +N L +H + +
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN 112
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK- 337
W + I+ + L+Y+H ++HR++K NI +D+ N K+ DFGLAK
Sbjct: 113 QQRDEYWRLFRQIL----EALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKN 165
Query: 338 ------LLGAERSYV------TTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVI 384
+L + + T +GT YVA E TG NE+ D YS GI+ E I
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
Query: 385 SGRNPVDYSRPPGEVNLVEWLKTM 408
+S VN+++ L+++
Sbjct: 226 -----YPFSTGXERVNILKKLRSV 244
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 37/255 (14%)
Query: 187 GFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+ + VIG G +G+V+ L ++ VA+K +L ++ +E ++ + V+H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQI----MRIVKHPNVVD 96
Query: 247 LLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNII----LGTA 296
L + + LV EY+ H ++ L + M +I
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH-----YAKLKQTMPMLLIKLYMYQLL 151
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFG 355
+ L Y+H + HRDIK N+LLD KL DFG AK+L A V+ + +
Sbjct: 152 RSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRY 206
Query: 356 YVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV---NLVEWLKTMVT 410
Y APE + +T D++S G ++ E++ G+ P+ PGE LVE +K + T
Sbjct: 207 YRAPELIFGATNY-TTNIDIWSTGCVMAELMQGQ-PLF----PGESGIDQLVEIIKVLGT 260
Query: 411 -NRNAEGVLDPRLQE 424
+R ++P E
Sbjct: 261 PSREQIKTMNPNYME 275
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 66
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 67 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 118
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT---TRVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 65
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 66 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT---RVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 15/199 (7%)
Query: 194 IGEGGYGIVYHGV--LEDNTNVAVKNL-LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGY 250
+GEG Y VY G L DN VA+K + L + A EV + ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
LV+EY+D +L+Q+L D G + + + +GL Y H KV
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYL-DDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE--YASTGMLN 368
+HRD+K N+L++++ KL+DFGLA+ V+ T Y P+ ST +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDY-S 179
Query: 369 ERSDVYSFGILIMEVISGR 387
+ D++ G + E+ +GR
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 104
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 105 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 156
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT---RVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR 240
+ ++ N F+ +IG GG+G VY D + L+ + K+ E A+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERI 240
Query: 241 HKNLVR--------LLGYCAEGAHRM-LVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRM 289
+LV + Y ++ + + ++ G+L L HG V + + +
Sbjct: 241 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRF-YAA 298
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR 349
IILG L ++H VV+RD+K +NILLD+ + ++SD GLA ++ + +
Sbjct: 299 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-- 349
Query: 350 VMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRNPV 390
+GT GY+APE G+ + S D +S G ++ +++ G +P
Sbjct: 350 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 68
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 69 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 120
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT---TRVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR 240
+ ++ N F+ +IG GG+G VY D + L+ + K+ E A+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERI 241
Query: 241 HKNLVR--------LLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLT-WEIRM- 289
+LV + Y ++ + + ++ G+L H + H + ++R
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY 297
Query: 290 --NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT 347
IILG L ++H VV+RD+K +NILLD+ + ++SD GLA ++ + +
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 348 TRVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRNPV 390
+GT GY+APE G+ + S D +S G ++ +++ G +P
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 30/224 (13%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR 240
+ ++ N F+ +IG GG+G VY D + L+ + K+ E A+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERI 241
Query: 241 HKNLVR--------LLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLT-WEIRM- 289
+LV + Y ++ + + ++ G+L H + H + ++R
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL----HYHLSQHGVFSEADMRFY 297
Query: 290 --NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT 347
IILG L ++H VV+RD+K +NILLD+ + ++SD GLA ++ + +
Sbjct: 298 AAEIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 348 TRVMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRNPV 390
+GT GY+APE G+ + S D +S G ++ +++ G +P
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 29/160 (18%)
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
+ L+G CAE L++ + G P+ I + + K L YL E
Sbjct: 103 MELMGTCAE--------------KLKKRMQG------PIPERILGKMTVAIVKALYYLKE 142
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY--- 361
+ V+HRD+K SNILLD++ KL DFG++ L +++ R G Y+APE
Sbjct: 143 --KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDRSAGCAAYMAPERIDP 198
Query: 362 --ASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV 399
+ + R+DV+S GI ++E+ +G+ P + EV
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEV 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR 240
+ ++ N F+ +IG GG+G VY D + L+ + K+ E A+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERI 241
Query: 241 HKNLVR--------LLGYCAEGAHRM-LVYEYIDNGNLEQWL--HGDVGPHSPLTWEIRM 289
+LV + Y ++ + + ++ G+L L HG V + + +
Sbjct: 242 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-VFSEADMRF-YAA 299
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR 349
IILG L ++H VV+RD+K +NILLD+ + ++SD GLA ++ + +
Sbjct: 300 EIILG----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-- 350
Query: 350 VMGTFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGRNPV 390
+GT GY+APE G+ + S D +S G ++ +++ G +P
Sbjct: 351 -VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 91
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 92 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 143
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT---RVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 24 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 76
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 77 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 135
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 136 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 190
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 191 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 247
Query: 409 VT 410
T
Sbjct: 248 GT 249
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 28 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 80
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 81 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 139
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 140 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 194
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 195 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 251
Query: 409 VT 410
T
Sbjct: 252 GT 253
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 35 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 87
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 88 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 146
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 147 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 201
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 202 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 258
Query: 409 VT 410
T
Sbjct: 259 GT 260
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
IG+G +G V+ G VAVK + ++R + + E+ +RH+N+ LG+ A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK-IFSSREERSWFREAEIYQTVMLRHENI---LGFIAA 71
Query: 254 GAHRMLVYEYIDNGNLEQ-WLHGDVGPHSPL---------TWEIRMNIILGTAKGLTYLH 303
DNG Q WL D H L T E + + L TA GL +LH
Sbjct: 72 DNK--------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 123
Query: 304 EGL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVT---TRVMGTFG 355
+ +P + HRD+KS NIL+ K ++D GLA + + +GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 356 YVAPEYA--STGMLN----ERSDVYSFGILIMEV 383
Y+APE S M + +R+D+Y+ G++ E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 68
Query: 238 RVRHKNLVRL-LGYCAEGAHRMLVY-----EYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + G + +VY +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 183 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 239
Query: 409 VT 410
T
Sbjct: 240 GT 241
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 28 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 80
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 81 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 139
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 140 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 194
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 195 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 251
Query: 409 VT 410
T
Sbjct: 252 GT 253
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 193 VIGEGGYGIVYHGVLEDNTNV----AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
VIG G Y V L+ + VK L N + + E + + + L
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 249 GYCAEGAHRML-VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
C + R+ V EY++ G+L H + L E + L YLHE
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYLHER-- 172
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
+++RD+K N+LLD + + KL+D+G+ K G T+ GT Y+APE
Sbjct: 173 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 368 NERSDVYSFGILIMEVISGRNPVD 391
D ++ G+L+ E+++GR+P D
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 194 IGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----VEVEAIGRVRHKNLVR 246
+GEG +G + YH VA+K ++N + A+ + + E+ + +RH ++++
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
L ++V EY N + + D ++ + + Y H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH- 132
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
K+VHRD+K N+LLD+ N K++DFGL+ ++ + +++ T G+ Y APE S +
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKL 188
Query: 367 L-NERSDVYSFGILIMEVISGRNPVDYSRPP 396
DV+S G+++ ++ R P D P
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 14/212 (6%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN----VAVKNLLNNRGQAEKE-FKVEV 233
R+ E+ IGEG +G V+ G+ N VA+K N + +E F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS-PLTWEIRMNII 292
+ + H ++V+L+G E ++ E G L +L V S L I
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQ--VRKFSLDLASLILYAYQ 119
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
L TA L YL + VHRDI + N+L+ KL DFGL++ + ++
Sbjct: 120 LSTA--LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL 174
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVI 384
++APE + SDV+ FG+ + E++
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 193 VIGEGGYGIVYHGVLEDNTNV----AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
VIG G Y V L+ + VK L N + + E + + + L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 249 GYCAEGAHRML-VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
C + R+ V EY++ G+L H + L E + L YLHE
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYLHER-- 140
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
+++RD+K N+LLD + + KL+D+G+ K G T+ GT Y+APE
Sbjct: 141 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 368 NERSDVYSFGILIMEVISGRNPVD 391
D ++ G+L+ E+++GR+P D
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 13/235 (5%)
Query: 158 TVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKN 217
+V A+ P + L +W + ++ F E+ +G G IVY +
Sbjct: 25 SVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK 84
Query: 218 LLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV 277
+L + +K + E+ + R+ H N+++L LV E + G L + +
Sbjct: 85 VLK-KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV-EK 142
Query: 278 GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPKLSDFG 334
G +S + IL + + YLHE +VHRD+K N+L K++DFG
Sbjct: 143 GYYSERDAADAVKQIL---EAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFG 196
Query: 335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
L+K++ E + V GT GY APE D++S GI+ ++ G P
Sbjct: 197 LSKIV--EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 194 IGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----VEVEAIGRVRHKNLVR 246
+GEG +G + YH VA+K ++N + A+ + + E+ + +RH ++++
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
L ++V EY N + + D ++ + + Y H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH- 122
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
K+VHRD+K N+LLD+ N K++DFGL+ ++ + +++ T G+ Y APE S +
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKL 178
Query: 367 L-NERSDVYSFGILIMEVISGRNPVDYSRPP 396
DV+S G+++ ++ R P D P
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 193 VIGEGGYGIVYHGVLEDNTNV----AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
VIG G Y V L+ + VK L N + + E + + + L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 249 GYCAEGAHRML-VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
C + R+ V EY++ G+L H + L E + L YLHE
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYLHER-- 129
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
+++RD+K N+LLD + + KL+D+G+ K G T+ GT Y+APE
Sbjct: 130 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 368 NERSDVYSFGILIMEVISGRNPVD 391
D ++ G+L+ E+++GR+P D
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 24/210 (11%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV--------EVEAIGRVRHKN 243
V+G+G +G V+ +++ + + L + + KV E + + V H
Sbjct: 30 KVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 244 LVRL-LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
+V+L + EG L+ +++ G+L L +V T E + A L +L
Sbjct: 88 IVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVM----FTEEDVKFYLAELALALDHL 142
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPE 360
H +++RD+K NILLD++ + KL+DFGL+K + +++Y GT Y+APE
Sbjct: 143 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPE 196
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNPV 390
+ + +D +SFG+L+ E+++G P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 194 IGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----VEVEAIGRVRHKNLVR 246
+GEG +G + YH VA+K ++N + A+ + + E+ + +RH ++++
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
L ++V EY N + + D ++ + + Y H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH- 126
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
K+VHRD+K N+LLD+ N K++DFGL+ ++ + +++ T G+ Y APE S +
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKL 182
Query: 367 L-NERSDVYSFGILIMEVISGRNPVDYSRPP 396
DV+S G+++ ++ R P D P
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 17 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 69
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 70 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 128
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 129 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 183
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 184 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 240
Query: 409 VT 410
T
Sbjct: 241 GT 242
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 194 IGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFK----VEVEAIGRVRHKNLVR 246
+GEG +G + YH VA+K ++N + A+ + + E+ + +RH ++++
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALK-IINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
L ++V EY N + + D ++ + + Y H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRH- 131
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
K+VHRD+K N+LLD+ N K++DFGL+ ++ + +++ T G+ Y APE S +
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVISGKL 187
Query: 367 L-NERSDVYSFGILIMEVISGRNPVDYSRPP 396
DV+S G+++ ++ R P D P
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 13/204 (6%)
Query: 193 VIGEGGYGIVYHGVLEDNTNV----AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
VIG G Y V L+ + VK L N + + E + + + L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 249 GYCAEGAHRML-VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
C + R+ V EY++ G+L H + L E + L YLHE
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDL--MFH--MQRQRKLPEEHARFYSAEISLALNYLHER-- 125
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
+++RD+K N+LLD + + KL+D+G+ K G T+ GT Y+APE
Sbjct: 126 -GIIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 368 NERSDVYSFGILIMEVISGRNPVD 391
D ++ G+L+ E+++GR+P D
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 183 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 239
Query: 409 VT 410
T
Sbjct: 240 GT 241
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 183 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 239
Query: 409 VT 410
T
Sbjct: 240 GT 241
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L ++ +E ++ +
Sbjct: 20 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MR 72
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 73 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-Y 131
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 132 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 186
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 187 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 243
Query: 409 VT 410
T
Sbjct: 244 GT 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 26/242 (10%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNLLNNRGQAEKEFKVEVEAIG 237
R EVS + D VIG G +G+VY L D+ VA+K +L + +E ++ +
Sbjct: 16 RPQEVS---YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MR 68
Query: 238 RVRHKNLVRLLGYCAEGAHRM------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
++ H N+VRL + + LV +Y+ H + +++
Sbjct: 69 KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-Y 127
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRV 350
+ + L Y+H + HRDIK N+LLD KL DFG AK L R
Sbjct: 128 MYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSX 182
Query: 351 MGTFGYVAPE--YASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM 408
+ + Y APE + +T + DV+S G ++ E++ G+ P+ + G LVE +K +
Sbjct: 183 ICSRYYRAPELIFGATDYTSS-IDVWSAGCVLAELLLGQ-PI-FPGDSGVDQLVEIIKVL 239
Query: 409 VT 410
T
Sbjct: 240 GT 241
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV--------EVEAIGRVRHKN 243
V+G+G +G V+ +++ + + L + + KV E + + V H
Sbjct: 31 KVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 88
Query: 244 LVRL-LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
+V+L + EG L+ +++ G+L L +V T E + A L +L
Sbjct: 89 IVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHL 143
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPE 360
H +++RD+K NILLD++ + KL+DFGL+K + +++Y GT Y+APE
Sbjct: 144 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPE 197
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ + +D +SFG+L+ E+++G P
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 25/210 (11%)
Query: 193 VIGEGGYGIVYHGVLEDNTNV----AVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLV 245
V+G+G +G V +L D A+K L + + + + VE + + +
Sbjct: 26 VLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 82
Query: 246 RLLGYCAEGAHRM-LVYEYIDNGNLEQWLH--GDVGPHSPLTWEIRMNIILGTAKGLTYL 302
L C + R+ V EY++ G+L + G + + ++I GL +L
Sbjct: 83 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFL 136
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTR-VMGTFGYVAPEY 361
H+ +++RD+K N++LD + + K++DFG+ K + VTTR GT Y+APE
Sbjct: 137 HKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG--VTTREFCGTPDYIAPEI 191
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
+ + D +++G+L+ E+++G+ P D
Sbjct: 192 IAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKV--------EVEAIGRVRHKN 243
V+G+G +G V+ +++ + + L + + KV E + + V H
Sbjct: 30 KVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPF 87
Query: 244 LVRL-LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYL 302
+V+L + EG L+ +++ G+L L +V T E + A L +L
Sbjct: 88 IVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHL 142
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPE 360
H +++RD+K NILLD++ + KL+DFGL+K + +++Y GT Y+APE
Sbjct: 143 HS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTVEYMAPE 196
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ + +D +SFG+L+ E+++G P
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 36/238 (15%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGY 250
V+ EGG+ VY + A+K LL+N + + EV + ++ H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 251 CA-------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+ G L+ + G L ++L + PL+ + + I T + + ++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL---------GAERSYVTTRVM--G 352
+P ++HRD+K N+LL Q KL DFG A + R+ V +
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 353 TFGYVAPEYA---STGMLNERSDVYSFGILIMEVISGRNPVD-----------YSRPP 396
T Y PE S + E+ D+++ G ++ + ++P + YS PP
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPP 270
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 100/242 (41%), Gaps = 36/242 (14%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIG 237
L+E ++ +IG+G +G VYHG + + ++ + K FK EV A
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYR 84
Query: 238 RVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-----DVGPHSPLTWEIRMNII 292
+ RH+N+V +G C H ++ L + DV + EI
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI----- 139
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK--LSDFGLAKLLG---AERSYVT 347
KG+ YLH ++H+D+KS N+ D N K ++DFGL + G A R
Sbjct: 140 ---VKGMGYLH---AKGILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDK 190
Query: 348 TRVM-GTFGYVAPEYASTGM---------LNERSDVYSFGILIMEVISGRNPVDYSRPPG 397
R+ G ++APE ++ SDV++ G + E+ + P + P
Sbjct: 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP--FKTQPA 248
Query: 398 EV 399
E
Sbjct: 249 EA 250
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG +E + EV + +V H N++ L +L+ E + G L +L
Sbjct: 53 SRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL----AQ 108
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP----KLSDFGL 335
L+ E + I G+ YLH K+ H D+K NI+L + P KL DFGL
Sbjct: 109 KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + E + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 166 AHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E ++ Q L + L E+ + + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 132 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEK-EFKVEVEAIGRVRHKNLVRLLGYCA 252
+G G +G+V+ V + V V +N +K K E+ + ++ H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
+ +L+ E++ G L + + ++ +N + +GL ++HE +VH
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVH 172
Query: 313 RDIKSSNILLD--KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNER 370
DIK NI+ + K + K+ DFGLA L + T F APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA--APEIVDREPVGFY 230
Query: 371 SDVYSFGILIMEVISGRNP 389
+D+++ G+L ++SG +P
Sbjct: 231 TDMWAIGVLGYVLLSGLSP 249
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 241 HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT 300
H +++ L+ + LV++ + G L +L V L+ + +I+ + ++
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA----LSEKETRSIMRSLLEAVS 214
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+LH +VHRD+K NILLD +LSDFG + L E + GT GY+APE
Sbjct: 215 FLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL--EPGEKLRELCGTPGYLAPE 269
Query: 361 YASTGM------LNERSDVYSFGILIMEVISGRNPVDYSR 394
M + D+++ G+++ +++G P + R
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 194 IGEGGYGIVYHGVLE-DNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + + VA+K L + A++ ++ E+ + ++H+N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 250 YCAEGAHRMLVYE-YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
+ Y+ Y+ ++ L +G + E ++ KGL Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSA--- 163
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGM- 366
VVHRD+K N+ +++ K+ DFGLA+ AE + YV TR Y APE + M
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 218
Query: 367 LNERSDVYSFGILIMEVISGRN 388
N+ D++S G ++ E+++G+
Sbjct: 219 YNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 18/202 (8%)
Query: 194 IGEGGYGIVYHGVLEDN-TNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + + + VA+K L + A++ ++ E+ + ++H+N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 250 YCAEGAHRMLVYE-YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
+ Y+ Y+ ++ L +G + E ++ KGL Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSA--- 145
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGM- 366
VVHRD+K N+ +++ K+ DFGLA+ AE + YV TR Y APE + M
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMH 200
Query: 367 LNERSDVYSFGILIMEVISGRN 388
N+ D++S G ++ E+++G+
Sbjct: 201 YNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNA 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA 252
+G+G YG V+ G L +VAVK + ++R + + E+ +RH N+ LG+ A
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIA 69
Query: 253 E-------GAHRMLVYEYIDNGNLEQWLH-GDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
L+ Y ++G+L +L + PH + + + + A GL +LH
Sbjct: 70 SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPH------LALRLAVSAACGLAHLHV 123
Query: 305 GL-----EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTT----RVMGTFG 355
+ +P + HRD KS N+L+ ++D GLA + Y+ RV GT
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKR 182
Query: 356 YVAPEYASTGMLNER------SDVYSFGILIMEVISGRNPV-----DYSRPP 396
Y+APE + + +D+++FG+++ E I+ R V DY RPP
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVNGIVEDY-RPP 232
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 18/237 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAI 236
+V+ + F IG+G +G V D + +N + E+ FK E++ +
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK-ELQIM 69
Query: 237 GRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
+ H LV L + +V + + G+L L +V E I
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH----FKEETVKLFICELV 125
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
L YL +++HRD+K NILLD+ + ++DF +A +L E T + GT Y
Sbjct: 126 MALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT--MAGTKPY 180
Query: 357 VAPEYAST---GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT 410
+APE S+ + D +S G+ E++ GR P +V +T V
Sbjct: 181 MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 182 EVSTNGFADENVIGEGGYGIVY--HGVLEDNT------NVAVKNLLNNRGQAEKEFKVEV 233
+V F V+G G YG V+ + +T V K + + + + + E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNII 292
+ + +R + L Y + ++ L+ +YI+ G L L E + I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL-----SQRERFTEHEVQIY 164
Query: 293 LG-TAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
+G L +LH+ +++RDIK NILLD + L+DFGL+K A+ +
Sbjct: 165 VGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221
Query: 352 GTFGYVAPEYASTGML--NERSDVYSFGILIMEVISGRNP 389
GT Y+AP+ G ++ D +S G+L+ E+++G +P
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 147 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 200
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 147 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 200
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 167 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 220
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 96 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 105/242 (43%), Gaps = 20/242 (8%)
Query: 193 VIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGR-VRHKNLVRL 247
VIG+G +G V + + AVK L + + EK E + + V+H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
V +YI+ G L L + P I A L YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI----ASALGYLHSL-- 158
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
+V+RD+K NILLD Q + L+DFGL K E + T+ GT Y+APE
Sbjct: 159 -NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 368 NERSDVYSFGILIMEVISGRNPVDYSRPPGE-----VNLVEWLKTMVTNRNAEGVLDPRL 422
+ D + G ++ E++ G P YSR E +N LK +TN +A +L+ L
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILNKPLQLKPNITN-SARHLLEGLL 274
Query: 423 QE 424
Q+
Sbjct: 275 QK 276
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 96 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 148 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 96 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 175 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 15/215 (6%)
Query: 183 VSTNGFADENVIGEGGYGIVYHGVLEDNTNV-AVKNLLNNRGQAEKEFKV---EVEAIGR 238
+ + F V+G+G +G V +++ ++ AVK L + + + + E +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 239 VRHKNLVRLLGYCAEGAHRML-VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILG-TA 296
R+ + L C + R+ V E+++ G+L + S E R
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ-----KSRRFDEARARFYAAEII 134
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
L +LH+ +++RD+K N+LLD + + KL+DFG+ K G T GT Y
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDY 190
Query: 357 VAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD 391
+APE + D ++ G+L+ E++ G P +
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 132 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 180 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 233
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 175 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
R L E ++ L L G ++ LT + +I +GL Y+H
Sbjct: 95 VFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 202
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 133 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 186
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 161 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 160 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 105
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 158
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTFGYVAPEYASTGM 366
+V+HRD+K N+ L++ K+ DFGLA + ER V + GT Y+APE S
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 367 LNERSDVYSFGILIMEVISGRNPVDYS 393
+ DV+S G ++ ++ G+ P + S
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 107
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 160
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTFGYVAPEYASTGM 366
+V+HRD+K N+ L++ K+ DFGLA + ER V + GT Y+APE S
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 367 LNERSDVYSFGILIMEVISGRNPVDYS 393
+ DV+S G ++ ++ G+ P + S
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 133 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 186
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 133 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 186
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDY 392
+ RS V+S GIL+ +++ G P ++
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 188 FADENVIGEGGYGIVYHGVLEDNTNV--AVKNLLNNRGQAEKE-FKVEVEAIGRVRHKNL 244
F + +G G +G V H V E ++ + +K + +R Q E + E+E + + H N+
Sbjct: 24 FIFKRKLGSGAFGDV-HLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
+++ + + +V E + G L + + L+ ++ L Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 305 GLEPKVVHRDIKSSNILLDKQWNP----KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
VVH+D+K NIL + +P K+ DFGLA+L ++ +T GT Y+APE
Sbjct: 143 Q---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE 196
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ + D++S G+++ +++G P
Sbjct: 197 VFKRD-VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 15/220 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCA 252
+GEG + I V + + +++ R +A + E+ A+ H N+V+L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFH 76
Query: 253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH 312
+ H LV E ++ G L + + + I+ ++++H+ VVH
Sbjct: 77 DQLHTFLVMELLNGGELFE----RIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVH 129
Query: 313 RDIKSSNILLDKQ---WNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE 369
RD+K N+L + K+ DFG A+L + + T T Y APE + +E
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGYDE 188
Query: 370 RSDVYSFGILIMEVISGRNPVD-YSRPPGEVNLVEWLKTM 408
D++S G+++ ++SG+ P + R + VE +K +
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
IG G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 94 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 86 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 91 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF-KVEVEA-IGRV-RHKNLVRLLGY 250
+G+G + +V V + T ++N + + ++ K+E EA I R+ +H N+VRL
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E LV++ + G L + D+ + + I + + ++H+ +
Sbjct: 99 ISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIHQILESVNHIHQH---DI 151
Query: 311 VHRDIKSSNILLDKQWN---PKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHRD+K N+LL + KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FAGTPGYLSPEVLRKDP 209
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 210 YGKPVDIWACGVILYILLVGYPP 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
R L E ++ L L G ++ + LT + +I +GL Y+H
Sbjct: 84 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAS 363
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 191
Query: 364 TGM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 74 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 131 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 184
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 85 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 36 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 93
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
R L E ++ L L G ++ LT + +I +GL Y+H
Sbjct: 94 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAS 363
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 201
Query: 364 TGM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 101 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 101 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 101 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 91 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 87 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 142
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 143 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 195
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 96 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 204
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 86 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E + Q L + L E+ + + + + H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEP---VQDLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 155 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 208
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 112 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 167
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 168 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 220
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 95 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 151 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 94 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 94 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 88 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 143
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 144 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 196
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 108 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 91 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 109 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 81
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 134
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMGTFGYVAPEYASTGM 366
+V+HRD+K N+ L++ K+ DFGLA + ER V + GT Y+APE S
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 367 LNERSDVYSFGILIMEVISGRNPVDYS 393
+ DV+S G ++ ++ G+ P + S
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 193 VIGEGGYGIVYHGVLEDNTNVAVK-NLLNNRGQAEKE-FKVEVEAIGRVRHKNLVRLLGY 250
++G G +G V H E T + + ++ RG +KE K E+ + ++ H NL++L
Sbjct: 96 ILGGGRFGQV-HKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+LV EY+D G L + + + L + M I +G+ ++H+ +
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI---CEGIRHMHQMY---I 208
Query: 311 VHRDIKSSNILLDKQ--WNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN 368
+H D+K NIL + K+ DFGLA+ GT ++APE + ++
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYDFVS 266
Query: 369 ERSDVYSFGILIMEVISGRNP 389
+D++S G++ ++SG +P
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP 287
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 100 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 156 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 226 EKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTW 285
E + E+ + +++H+N+V L H LV + + G L + T
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTE 119
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGAE 342
+ +I + YLH +VHRD+K N+L D++ +SDFGL+K+ G
Sbjct: 120 KDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG-- 174
Query: 343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+ V + GT GYVAPE + ++ D +S G++ ++ G P
Sbjct: 175 KGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V ++ +AVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 118 VFTPATS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 173
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 174 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 226
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N D++S G ++ E+++GR
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 128 NC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVR----HKN 243
++G GG+G VY G+ + DN VA+K++ +R G+ +V +E + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
++RLL + +L+ E Q L + L E+ + + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 304 EGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
V+HRDIK NIL+D + KL DFG LL + V T GT Y PE+
Sbjct: 128 NX---GVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 363 STGMLNERS-DVYSFGILIMEVISGRNPVDYS 393
+ RS V+S GIL+ +++ G P ++
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 232 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMN 290
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 131
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
+L L L+ +VHRD+K NILLD N KL+DFG + L V
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 183
Query: 351 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRNP 389
GT Y+APE M + D++S G+++ +++G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 108 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 216
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 40 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 97
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
R L E ++ L L G ++ LT + +I +GL Y+H
Sbjct: 98 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAS 363
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 154 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 205
Query: 364 TGM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 87
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 140
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN 368
+V+HRD+K N+ L++ K+ DFGLA + + T + GT Y+APE S +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 199
Query: 369 ERSDVYSFGILIMEVISGRNPVDYS 393
DV+S G ++ ++ G+ P + S
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 49 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 106
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 107 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 164 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 215
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLN 196
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 232 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMN 290
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 131
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
+L L L+ +VHRD+K NILLD N KL+DFG + L + V
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--V 183
Query: 351 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRNP 389
GT Y+APE M + D++S G+++ +++G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 248 LGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVG----PHSPL-TWEIRMNIILGTAKGLTY 301
L C + R+ V EY++ G+L + VG PH+ EI + + +KG+ Y
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEY 361
RD+K N++LD + + K++DFG+ K T GT Y+APE
Sbjct: 466 -----------RDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEI 513
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
+ + D ++FG+L+ E+++G+ P +
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
R L E ++ L L G ++ LT + +I +GL Y+H
Sbjct: 84 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAS 363
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 191
Query: 364 TGM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 232 EVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMN 290
EV+ + +V H N+++L LV++ + G L +L V T +I M
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI-MR 118
Query: 291 IILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV 350
+L L L+ +VHRD+K NILLD N KL+DFG + L V
Sbjct: 119 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREV 170
Query: 351 MGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISGRNP 389
GT Y+APE M + D++S G+++ +++G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 94 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 100 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 156 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 91 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 147 --DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 95 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 150
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E + YV TR Y APE
Sbjct: 151 --DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 136
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN 368
+V+HRD+K N+ L++ K+ DFGLA + + T + GT Y+APE S +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 369 ERSDVYSFGILIMEVISGRNPVDYS 393
DV+S G ++ ++ G+ P + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 169 HLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE 228
+G G + + ++ + + +G+G + +V V + ++N + + ++
Sbjct: 12 QMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD 71
Query: 229 F-KVEVEA--IGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTW 285
F K+E EA +++H N+VRL E + LV++ + G L + D+ +
Sbjct: 72 FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSE 127
Query: 286 EIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAE 342
+ I + + Y H +VHR++K N+LL K KL+DFGLA +
Sbjct: 128 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVN 182
Query: 343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
S GT GY++PE ++ D+++ G+++ ++ G P
Sbjct: 183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAV-----KNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G+GG+ + D V K+LL Q EK +E+ + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGFH 83
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
G+ + +V E +L + P I+LG YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 136
Query: 309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN 368
+V+HRD+K N+ L++ K+ DFGLA + + T + GT Y+APE S +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 369 ERSDVYSFGILIMEVISGRNPVDYS 393
DV+S G ++ ++ G+ P + S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 25/150 (16%)
Query: 251 CAEGAHRM-LVYEYIDNGNLEQWLHGDVG----PHSPL-TWEIRMNIILGTAKGLTYLHE 304
C + R+ V EY++ G+L + VG PH+ EI + + +KG+ Y
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY--- 144
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY--VTTRVM-GTFGYVAPEY 361
RD+K N++LD + + K++DFG+ K E + VTT+ GT Y+APE
Sbjct: 145 --------RDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVTTKXFCGTPDYIAPEI 192
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNPVD 391
+ + D ++FG+L+ E+++G+ P +
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 15/203 (7%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+GEG +G V + VA+K + L + + E+ + +RH ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
++V EY G L + + +T + + Y H K
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDY----IVEKKRMTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML-N 368
+VHRD+K N+LLD N K++DFGL+ ++ + +++ T G+ Y APE + +
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSC-GSPNYAAPEVINGKLYAG 186
Query: 369 ERSDVYSFGILIMEVISGRNPVD 391
DV+S GI++ ++ GR P D
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNL--LNNRGQAEKEFKVEVEAIGRVRH 241
++ F ++++GEG YG+V + VA+K + + A + + E++ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+N++ + + YI ++ LH + L+ + I T + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKV 127
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL---GAERSYVT------TRVMG 352
LH V+HRD+K SN+L++ + K+ DFGLA+++ A+ S T T +
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 353 TFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGR 387
T Y APE T R+ DV+S G ++ E+ R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNL--LNNRGQAEKEFKVEVEAIGRVRH 241
++ F ++++GEG YG+V + VA+K + + A + + E++ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+N++ + + YI ++ LH + L+ + I T + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKV 127
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL---GAERSYVT------TRVMG 352
LH V+HRD+K SN+L++ + K+ DFGLA+++ A+ S T T +
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 353 TFGYVAPEYASTGMLNERS-DVYSFGILIMEVISGR 387
T Y APE T R+ DV+S G ++ E+ R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + + H N+V+L LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 339 LGAERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF-KVEVEA--IGRVRHKNLVRLLGY 250
+G+G + +V V + ++N + + ++F K+E EA +++H N+VRL
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + LV++ + G L + D+ + + I + + Y H +
Sbjct: 73 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 125
Query: 311 VHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
VHR++K N+LL K KL+DFGLA + S GT GY++PE
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 183
Query: 368 NERSDVYSFGILIMEVISGRNP 389
++ D+++ G+++ ++ G P
Sbjct: 184 SKPVDIWACGVILYILLVGYPP 205
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 112 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 167
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGLA+ E YV TR Y APE
Sbjct: 168 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNW 220
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
EV + + H N+++L + + + LV E G L D H E+ +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL-----FDEIIHRMKFNEVDAAV 140
Query: 292 ILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVT 347
I+ G+TYLH+ +VHRD+K N+LL+ + K+ DFGL+ + ++
Sbjct: 141 IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--M 195
Query: 348 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+GT Y+APE +E+ DV+S G+++ +++G P
Sbjct: 196 KERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPP 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVK-----NLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG+G + +V + E AVK ++ G + ++ K E ++H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 247 LLGYCAEGAHRMLVYEYIDNGNL--EQWLHGDVG-PHSPLTWEIRMNIILGTAKGLTYLH 303
LL + +V+E++D +L E D G +S M IL + L Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL---EALRYCH 149
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+ ++HRD+K +LL + N KL FG+A LG E V +GT ++APE
Sbjct: 150 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPE 205
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ DV+ G+++ ++SG P
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + + H N+V+L LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 339 LGAERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF-KVEVEA--IGRVRHKNLVRLLGY 250
+G+G + +V V + ++N + + ++F K+E EA +++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + LV++ + G L + D+ + + I + + Y H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 311 VHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
VHR++K N+LL K KL+DFGLA + S GT GY++PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 368 NERSDVYSFGILIMEVISGRNP 389
++ D+++ G+++ ++ G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 15/174 (8%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + + H N+V+L LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 339 LGAERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 163 FTFGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF-KVEVEA--IGRVRHKNLVRLLGY 250
+G+G + +V V + ++N + + ++F K+E EA +++H N+VRL
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
E + LV++ + G L + D+ + + I + + Y H +
Sbjct: 74 IQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESIAYCHSN---GI 126
Query: 311 VHRDIKSSNILLD---KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
VHR++K N+LL K KL+DFGLA + S GT GY++PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLKKDPY 184
Query: 368 NERSDVYSFGILIMEVISGRNP 389
++ D+++ G+++ ++ G P
Sbjct: 185 SKPVDIWACGVILYILLVGYPP 206
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVK-----NLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
VIG+G + +V + E AVK ++ G + ++ K E ++H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 247 LLGYCAEGAHRMLVYEYIDNGNL--EQWLHGDVG-PHSPLTWEIRMNIILGTAKGLTYLH 303
LL + +V+E++D +L E D G +S M IL + L Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL---EALRYCH 147
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+ ++HRD+K +LL + N KL FG+A LG E V +GT ++APE
Sbjct: 148 DN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPE 203
Query: 361 YASTGMLNERSDVYSFGILIMEVISGRNP 389
+ DV+ G+++ ++SG P
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEA-IGRV-RHKNLVRLLGY 250
IG+G + +V V L A K + + A K+E EA I R+ +H N+VRL
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E LV++ + G L + D+ + + I + + + H+ V
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM---GV 124
Query: 311 VHRDIKSSNILLDKQWN---PKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHRD+K N+LL + KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKEA 182
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 183 YGKPVDIWACGVILYILLVGYPP 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ D+GLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 51 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 106
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 164 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ DFGL + E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + +V TR Y APE
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLN 196
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 51 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 106
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 164 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 222 RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHS 281
RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 54 RGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKE 109
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGLAK 337
LT E + G+ YLH ++ H D+K NI+L + PK + DFGLA
Sbjct: 110 SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+ + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 167 KIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 88 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + +V TR Y APE
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLN 196
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 26 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 83
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 84 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E + +V TR Y APE
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLN 192
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
++HRD+K SN+ +++ K+ DFGLA+ E T + T Y APE M
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRAPEIMLNWM 198
Query: 367 -LNERSDVYSFGILIMEVISGRN 388
N+ D++S G ++ E+++GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 188 FADENVIGEGGYGIVYHGVL-EDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKN 243
+ D +G G YG V V VA+K L + A++ ++ E+ + +RH+N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHEN 85
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP---HSPLTWEIRMNIILGTAKGLT 300
++ LL + ++ D + ++ D+G H L + ++ KGL
Sbjct: 86 VIGLLDVFTPDET---LDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLR 142
Query: 301 YLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE-RSYVTTRVMGTFGYVAP 359
Y+H ++HRD+K N+ +++ K+ DFGLA+ +E V TR Y AP
Sbjct: 143 YIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAP 194
Query: 360 EYASTGM-LNERSDVYSFGILIMEVISGRN 388
E M + D++S G ++ E+I+G+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 282 PLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA 341
P+T E ++ A+G+ +L K +HRD+ + NILL + K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 342 ERSYV---TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS 385
YV TR+ ++APE + + +SDV+S+G+L+ E+ S
Sbjct: 252 NPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-KEFKVEVEAIGRV-RHKNLV 245
+G G +G V G+ + T VAVK L +E K E++ + + H N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 246 RLLGYCA-EGAHRMLVYEYIDNGNLEQWL 273
LLG C +G M++ EY GNL +L
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
EV + + H N+V+L L+ EY G + +L H + + +
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA----HGRMKEKEARSK 116
Query: 292 ILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVM 351
+ Y H+ ++VHRD+K+ N+LLD N K++DFG + T
Sbjct: 117 FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FC 171
Query: 352 GTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 185 TNGFADENVIGEGGYGIVYHGVLEDNTN-VAVKNL--LNNRGQAEKEFKVEVEAIGRVRH 241
++ F ++++GEG YG+V + VA+K + + A + + E++ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
+N++ + + YI ++ LH + L+ + I T + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHIQYFIYQTLRAVKV 127
Query: 302 LHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL---GAERSYVTTRVMGTFGYV- 357
LH V+HRD+K SN+L++ + K+ DFGLA+++ A+ S T + G +V
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 358 -----APEYASTGMLNERS-DVYSFGILIMEVISGR 387
APE T R+ DV+S G ++ E+ R
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYH------GVLEDNTNVAVKNLLNNRGQAEK 227
W L V+ N F V+G+GG+G V G + + K + +G+A
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA-- 229
Query: 228 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLH--GDVGPHSPLT 284
+ + I + V L Y E + LV ++ G+L+ ++ G G
Sbjct: 230 -MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 285 WEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
I GL LH ++V+RD+K NILLD + ++SD GLA + E
Sbjct: 289 VFYAAEICC----GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQ 340
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
+ RV GT GY+APE D ++ G L+ E+I+G++P
Sbjct: 341 TIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 174 HWYTLRELEVSTNGFADENVIGEGGYGIVYH------GVLEDNTNVAVKNLLNNRGQAEK 227
W L V+ N F V+G+GG+G V G + + K + +G+A
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEA-- 229
Query: 228 EFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLH--GDVGPHSPLT 284
+ + I + V L Y E + LV ++ G+L+ ++ G G
Sbjct: 230 -MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 285 WEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
I GL LH ++V+RD+K NILLD + ++SD GLA + E
Sbjct: 289 VFYAAEICC----GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQ 340
Query: 345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
+ RV GT GY+APE D ++ G L+ E+I+G++P
Sbjct: 341 TIKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W + + F IG G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H +E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 H--METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G++ L P I+L YLH +++RD+K N+
Sbjct: 120 MEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q K++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + + H N+V+L LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 339 LGAERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 163 FTFGNK--LDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 191 ENVIGEGGYGIVYHGVLEDNTNV--AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
EN IG G +G V V + T + A K + + FK E+E + + H N++RL
Sbjct: 14 ENTIGRGSWGEVKIAV-QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 72
Query: 249 GYCAEGAHRMLVYEYIDNGNL-EQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ LV E G L E+ +H V S I+ + Y H+
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHKL-- 125
Query: 308 PKVVHRDIKSSNILL--DKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST 364
V HRD+K N L D +P KL DFGLA + T +GT YV+P+
Sbjct: 126 -NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE- 181
Query: 365 GMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
G+ D +S G+++ ++ G P +S P
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPP--FSAP 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W + + F IG G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H +E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 H--METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q K++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 122 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 173
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 121 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 172
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 173 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 128 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 179
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 180 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 13/174 (7%)
Query: 220 NNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGP 279
+ RG + ++ + EV + ++H N++ L +L+ E + G L +L
Sbjct: 52 SRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL----AE 107
Query: 280 HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK----LSDFGL 335
LT E + G+ YLH ++ H D+K NI+L + PK + DFGL
Sbjct: 108 KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
Query: 336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
A + + + GT +VAPE + L +D++S G++ ++SG +P
Sbjct: 165 AHKIDFGNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH 280
N +K F+ EV + + H N+V+L LV EY G + +L H
Sbjct: 46 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----H 100
Query: 281 SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG 340
+ + + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 101 GWMKEKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT 157
Query: 341 AERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 158 FGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEA-IGRV-RHKNLVRLLGY 250
+G+G + +V V + A K + + A K+E EA I R+ +H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E H L+++ + G L + D+ + + I + + + H+ V
Sbjct: 90 ISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM---GV 142
Query: 311 VHRDIKSSNILLDKQWN---PKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHRD+K N+LL + KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDP 200
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 122 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 173
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 122 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 173
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 174 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 191 ENVIGEGGYGIVYHGVLEDNTNV--AVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
EN IG G +G V V + T + A K + + FK E+E + + H N++RL
Sbjct: 31 ENTIGRGSWGEVKIAV-QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLY 89
Query: 249 GYCAEGAHRMLVYEYIDNGNL-EQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
+ LV E G L E+ +H V S I+ + Y H+
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHKL-- 142
Query: 308 PKVVHRDIKSSNILL--DKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST 364
V HRD+K N L D +P KL DFGLA + T +GT YV+P+
Sbjct: 143 -NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE- 198
Query: 365 GMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
G+ D +S G+++ ++ G P +S P
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPP--FSAP 227
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 19/216 (8%)
Query: 186 NGFADENVIGEGGYG---IVYHGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRV 239
+ F IG G +G +V H +E + A+K L + K+ + E + V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKH--METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
LV+L + ++ +V EY+ G++ L P I+L
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----F 154
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAP 359
YLH +++RD+K N+L+D+Q K++DFG AK + T + GT Y+AP
Sbjct: 155 EYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAP 207
Query: 360 EYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
E + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH 280
N +K F+ EV + + H N+V+L LV EY G + +L H
Sbjct: 54 NPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVA----H 108
Query: 281 SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG 340
+ + + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 109 GRMKEKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 341 AERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
T G+ Y APE + DV+S G+++ ++SG P D
Sbjct: 166 VGNKLDT--FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAE--------KEFKVEVEAIGRVRHKNL 244
+G G +G V+ V E N V VK + + + + +E+ + RV H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 245 VRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH--SPLTWEIRMNIILGTAKGLTYL 302
+++L LV E +G L+ + D P PL I ++ +A G L
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLV--SAVGYLRL 148
Query: 303 HEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE-Y 361
+ ++HRDIK NI++ + + KL DFG A L ER + GT Y APE
Sbjct: 149 KD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAPEVL 201
Query: 362 ASTGMLNERSDVYSFGILIMEVISGRNP 389
+++S G+ + ++ NP
Sbjct: 202 MGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 42/224 (18%)
Query: 194 IGEGGYGIVYHGVLEDNTNV-AVKNLLN---NRGQAEKEFKVEVEAIGRVR-HKNLVRLL 248
+G+G YGIV+ + V AVK + + N A++ F+ E+ + + H+N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 249 GYCAEGAHR--MLVYEYIDNGNLEQWLHGDVGPH--SPLTWEIRMNIILGTAKGLTYLHE 304
R LV++Y +E LH + + P+ + ++ K + YLH
Sbjct: 76 NVLRADNDRDVYLVFDY-----METDLHAVIRANILEPVH---KQYVVYQLIKVIKYLHS 127
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY------------------- 345
G ++HRD+K SNILL+ + + K++DFGL++ R
Sbjct: 128 G---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 346 -VTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGR 387
+ T + T Y APE + + D++S G ++ E++ G+
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 186 NGFADENVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQ-AEKEFKVEVEAIGRVRHKN 243
N E ++G G G +V+ G + VAVK +L + A E K+ E+ H N
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDIALMEIKLLTESDD---HPN 70
Query: 244 LVRLLGYCAEGAHRMLVYEY-IDNGNLEQWLHGDVGPHSPLTWEIRMN---IILGTAKGL 299
++R YC+E R L + N NL+ + L + N ++ A G+
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 300 TYLHEGLEPKVVHRDIKSSNILL--------DKQWNPK-----LSDFGLAKLLGAERSYV 346
+LH K++HRD+K NIL+ D+Q + +SDFGL K L + +S
Sbjct: 129 AHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 347 TTRV---MGTFGYVAPE-------YASTGMLNERSDVYSFGILIMEVIS-GRNPV--DYS 393
T + GT G+ APE + L D++S G + ++S G++P YS
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 394 R 394
R
Sbjct: 246 R 246
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 247 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 298
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 299 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + + H N+V+L LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN- 161
Query: 339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERS------DVYSFGILIMEVISGRNPVD 391
+ + F AP YA+ + + DV+S G+++ ++SG P D
Sbjct: 162 -----EFTFGNKLDAFC-GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 4 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 62
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 63 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 121 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 173
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 174 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 229
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 230 YEMAAGYPPFFADQP 244
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 230 KVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRM 289
+ E+E + ++ H ++++ + + +V E ++ G L + G+
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 290 NIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYV 346
++L + YLHE ++HRD+K N+LL Q K++DFG +K+LG E S +
Sbjct: 261 QMLLA----VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLM 312
Query: 347 TTRVMGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVISGRNPVDYSR 394
T + GT Y+APE T N D +S G+++ +SG P R
Sbjct: 313 RT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 188 FADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR 246
+ D +G GG G+V+ V D + VA+K ++ Q+ K E++ I R+ H N+V+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 247 LLGYCAEGAHRM---------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
+ ++ L YI +E L +V PL E + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL-ANVLEQGPLLEEHARLFMYQLLR 131
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQ-WNPKLSDFGLAKLLGAERSYVTTRVMGTFGY 356
GL Y+H V+HRD+K +N+ ++ + K+ DFGLA+++ S+ + + G
Sbjct: 132 GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH---KGHLSEGL 185
Query: 357 VAPEYASTGML------NERSDVYSFGILIMEVISGRN 388
V Y S +L + D+++ G + E+++G+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 82
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 83 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 140
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 141 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 193
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 194 LIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 250 YEMAAGYPPFFADQP 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ FGLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 24 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 82
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 83 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 140
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 141 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 193
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 194 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 250 YEMAAGYPPFFADQP 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L YLH E VV+RD+K N++LDK + K++DFGL K G + GT Y+
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 319
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
APE D + G+++ E++ GR P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 87
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHG----DVGPHSPLTWEIRMNIILGTAKGLTYLHE 304
R L E ++ L L G ++ LT + +I +GL Y+H
Sbjct: 88 DVFTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 305 GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAS 363
++HRD+K SN+ +++ K+ DF LA+ E + YV TR Y APE
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 364 TGM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L YLH E VV+RD+K N++LDK + K++DFGL K G + GT Y+
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYL 316
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
APE D + G+++ E++ GR P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H +E + A+K L + KE + E + V LV+L + ++ +V
Sbjct: 62 H--METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
++D+Q K++DFGLAK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 MIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ D GLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGY 250
++GEG Y V V L++ AVK + G + EVE + + + +KN++ L+ +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+ LV+E + G++ + ++ A L +LH +
Sbjct: 80 FEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLHT---KGI 132
Query: 311 VHRDIKSSNILLD--KQWNP-KLSDFGLAKLLGAERSYV------TTRVMGTFGYVAPEY 361
HRD+K NIL + ++ +P K+ DF L + S T G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 362 A-----STGMLNERSDVYSFGILIMEVISGRNP 389
++R D++S G+++ ++SG P
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAACKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 192 NVIGEGGYGIVYHGVLEDNT------NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLV 245
+++GEG YG V VL+ T + K L E K E++ + R+RHKN++
Sbjct: 11 DLLGEGSYGKVKE-VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 246 RLLG--YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
+L+ Y E +V EY G E D P GL YLH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEKRFPVCQAHGYFCQLIDGLEYLH 126
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRV-MGTFGYVAPEYA 362
+VH+DIK N+LL K+S G+A+ L + T R G+ + PE A
Sbjct: 127 SQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA 183
Query: 363 S--TGMLNERSDVYSFGILIMEVISGRNPVD 391
+ + D++S G+ + + +G P +
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 193 VIGEGGYGIVYHG-VLEDNTNVAVKNLLNNRGQAEKEFK------VEVEAIGRVR----H 241
++G+GG+G V+ G L D VA+K + NR +EV + +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY 301
++RLL + MLV E Q L + PL + +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 302 LHEGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
H VVHRDIK NIL+D ++ KL DFG LL E T GT Y PE
Sbjct: 155 CHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPE 208
Query: 361 YASTGMLNE-RSDVYSFGILIMEVISGRNPVD 391
+ S + + V+S GIL+ +++ G P +
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPH 280
N +K F+ EV + + H N+V+L L+ EY G + +L H
Sbjct: 54 NPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA----H 108
Query: 281 SPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG 340
+ + + + Y H+ ++VHRD+K+ N+LLD N K++DFG +
Sbjct: 109 GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165
Query: 341 AERSYVTTRVMGTFGYVAPEYASTGMLNERS------DVYSFGILIMEVISGRNPVD 391
V ++ G AP YA+ + + DV+S G+++ ++SG P D
Sbjct: 166 -----VGGKLDAFCG--APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L YLH E VV+RD+K N++LDK + K++DFGL K G + GT Y+
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 178
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
APE D + G+++ E++ GR P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ D GLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L YLH E VV+RD+K N++LDK + K++DFGL K G + GT Y+
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 177
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
APE D + G+++ E++ GR P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L YLH E VV+RD+K N++LDK + K++DFGL K G + GT Y+
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYL 176
Query: 358 APEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
APE D + G+++ E++ GR P
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTF 354
T +G+ YLH +V+HRD+K N+ L+ + K+ DFGLA + + T + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTP 206
Query: 355 GYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS 393
Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 18/222 (8%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE----FKVEV 233
+R+L + + VIG G +G V + V LL+ ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-DVGPHSPLTWEIRMNII 292
+ + +V+L + + +V EY+ G+L + DV P W
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWAR----- 176
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
TA+ + L +HRD+K N+LLDK + KL+DFG + E +G
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 353 TFGYVAPEYAST----GMLNERSDVYSFGILIMEVISGRNPV 390
T Y++PE + G D +S G+ + E++ G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 170
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 37/237 (15%)
Query: 186 NGFADENVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQ-AEKEFKVEVEAIGRVRHKN 243
N E ++G G G +V+ G + VAVK +L + A E K+ E+ H N
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDIALMEIKLLTESDD---HPN 88
Query: 244 LVRLLGYCAEGAHRMLVYEY-IDNGNLEQWLHGDVGPHSPLTWEIRMN---IILGTAKGL 299
++R YC+E R L + N NL+ + L + N ++ A G+
Sbjct: 89 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 300 TYLHEGLEPKVVHRDIKSSNILL--------DKQWNPK-----LSDFGLAKLLGAERSYV 346
+LH K++HRD+K NIL+ D+Q + +SDFGL K L + +
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 347 TTRV---MGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVIS-GRNPV--DYSR 394
+ GT G+ APE ++ L D++S G + ++S G++P YSR
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 65 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 119
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 120 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPE 175
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
LT E + AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 343 RSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
YV ++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 93
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWL 273
N+V LLG C + G M++ E+ GNL +L
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
LT E + AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 343 RSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
YV ++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 91
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWL 273
N+V LLG C + G M++ E+ GNL +L
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 63 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 117
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 173
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 18/222 (8%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE----FKVEV 233
+R+L + + VIG G +G V + V LL+ ++ F E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-DVGPHSPLTWEIRMNII 292
+ + +V+L + + +V EY+ G+L + DV P W
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWAR----- 171
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
TA+ + L +HRD+K N+LLDK + KL+DFG + E +G
Sbjct: 172 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 353 TFGYVAPEYAST----GMLNERSDVYSFGILIMEVISGRNPV 390
T Y++PE + G D +S G+ + E++ G P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 37/237 (15%)
Query: 186 NGFADENVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQ-AEKEFKVEVEAIGRVRHKN 243
N E ++G G G +V+ G + VAVK +L + A E K+ E+ H N
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDIALMEIKLLTESDD---HPN 88
Query: 244 LVRLLGYCAEGAHRMLVYEY-IDNGNLEQWLHGDVGPHSPLTWEIRMN---IILGTAKGL 299
++R YC+E R L + N NL+ + L + N ++ A G+
Sbjct: 89 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 300 TYLHEGLEPKVVHRDIKSSNILL--------DKQWNPK-----LSDFGLAKLLGAERSYV 346
+LH K++HRD+K NIL+ D+Q + +SDFGL K L + +
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 347 TTRV---MGTFGYVAPEY---ASTGMLNERSDVYSFGILIMEVIS-GRNPV--DYSR 394
+ GT G+ APE ++ L D++S G + ++S G++P YSR
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
LT E + AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 343 RSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
YV ++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 84
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWL 273
N+V LLG C + G M++ E+ GNL +L
Sbjct: 85 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 90/215 (41%), Gaps = 16/215 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPV 390
Y+APE D + G+++ E++ GR P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
LT E + AKG+ +L K +HRD+ + NILL ++ K+ DFGLA+ + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 343 RSYVTT-RVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
YV ++APE + +SDV+SFG+L+ E+ S G +P
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 194 IGEGGYGIVYH----GVLEDNT--NVAVKNLLNNRGQAE-----KEFKVEVEAIGRVRHK 242
+G G +G V G+ + T VAVK L +E E K+ + IG H
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IGH--HL 86
Query: 243 NLVRLLGYCAE-GAHRMLVYEYIDNGNLEQWL 273
N+V LLG C + G M++ E+ GNL +L
Sbjct: 87 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
++D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 IIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 18/222 (8%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE----FKVEV 233
+R+L + + VIG G +G V + V LL+ ++ F E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-DVGPHSPLTWEIRMNII 292
+ + +V+L + + +V EY+ G+L + DV P W
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWAR----- 176
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
TA+ + L +HRD+K N+LLDK + KL+DFG + E +G
Sbjct: 177 FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 353 TFGYVAPEYAST----GMLNERSDVYSFGILIMEVISGRNPV 390
T Y++PE + G D +S G+ + E++ G P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 90/214 (42%), Gaps = 16/214 (7%)
Query: 182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTN--VAVKNLLNNRGQAEKEFK---VEVEAI 236
+V+ N F ++G+G +G V V E T A+K L A+ E E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59
Query: 237 GRVRHKNLVRLLGYCAEGAHRM-LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
RH L L Y + R+ V EY + G L + H + T E
Sbjct: 60 QNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEI 114
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
L YLH VV+RDIK N++LDK + K++DFGL K G GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPE 170
Query: 356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
Y+APE D + G+++ E++ GR P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
++ +G P +P
Sbjct: 229 YQMAAGYPPFFADQP 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT--NVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLL 248
+G G YG V + T VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 50 VGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLL 107
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEG 305
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 108 DVFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 306 LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYAST 364
++HRD+K SN+ +++ K+ DFGLA+ E V TR Y APE
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRAPEIMLN 216
Query: 365 GM-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRLLG 249
+G G YG V + VAVK L + A++ ++ E+ + ++H+N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGL 306
+ E+ D + + D+ LT + +I +GL Y+H
Sbjct: 89 VFTPARS---LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTG 365
++HRD+K SN+ +++ K+ D GLA+ E + YV TR Y APE
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 366 M-LNERSDVYSFGILIMEVISGRN 388
M N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 179 RELEVSTNGFADENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNN-RGQAEKEFKVEVEAI 236
+ EV + +G G YG+V + +AVK + Q +K ++++
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 237 GR-VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
R V V G + E +D +L+++ + + +I I +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFG 355
K L +LH L V+HRD+K SN+L++ K+ DFG++ L S T G
Sbjct: 163 VKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTIDAGCKP 218
Query: 356 YVAPEYASTGM----LNERSDVYSFGILIMEVISGRNPVD 391
Y+APE + + + +SD++S GI ++E+ R P D
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 179
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 232
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMG 352
T +G+ YLH +V+HRD+K N+ L+ + K+ DFGLA + ER + G
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KXLCG 204
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS 393
T Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 194 IGEGGYGIVYHGVLEDNTN---VAVKNLLNNRGQAEKEFKVEVEAIG--RVRHKNLVRLL 248
IG G +G+ ++ D VAVK + RG A E V+ E I +RH N+VR
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYI--ERGAAIDE-NVQREIINHRSLRHPNIVRFK 82
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP 308
H ++ EY G L + + + G S +L G++Y H
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARFFFQQLLS---GVSYCHSM--- 135
Query: 309 KVVHRDIKSSNILLDKQWNP--KLSDFGLAK---LLGAERSYVTTRVMGTFGYVAPEYAS 363
++ HRD+K N LLD P K+ DFG +K L +S V GT Y+APE
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLL 190
Query: 364 TGMLNER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G YG V Y L VAVK L + A + ++ E+ + ++H+N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
L E L ++ L+ E ++ +GL Y+H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-- 142
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGM 366
++HRD+K SN+ +++ ++ DFGLA+ E + YV TR Y APE M
Sbjct: 143 -GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWM 196
Query: 367 -LNERSDVYSFGILIMEVISGR 387
N+ D++S G ++ E++ G+
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+L+D+Q K++DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMG 352
T +G+ YLH +V+HRD+K N+ L+ + K+ DFGLA + ER + G
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCG 188
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS 393
T Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H +E + A+K L + KE + E + V LV+L + ++ +V
Sbjct: 62 H--METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
++D+Q +++DFGLAK + T + GT Y+APE + N+ D ++ G+LI
Sbjct: 173 MIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 23/237 (9%)
Query: 167 VSHLGWGHWYT--LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQ 224
+ +L W +T ++++ + F VIG G +G V L++ V +LN
Sbjct: 53 LEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM 112
Query: 225 AEKE----FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG--DVG 278
++ F+ E + + K + L + + LV +Y G+L L D
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL 172
Query: 279 PHSPLTWEI-RMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK 337
P + + M I + + L Y VHRDIK NIL+D + +L+DFG
Sbjct: 173 PEEMARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCL 223
Query: 338 LLGAERSYVTTRVMGTFGYVAPEYAST-----GMLNERSDVYSFGILIMEVISGRNP 389
L + + ++ +GT Y++PE G D +S G+ + E++ G P
Sbjct: 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 159
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 212
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 295 TAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL--GAERSYVTTRVMG 352
T +G+ YLH +V+HRD+K N+ L+ + K+ DFGLA + ER + G
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KDLCG 204
Query: 353 TFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS 393
T Y+APE + D++S G ++ ++ G+ P + S
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 18/221 (8%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKE----FKVEV 233
+R L++ + VIG G +G V + + V LL+ ++ F E
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 234 EAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG-DVGPHSPLTWEIRMNII 292
+ + +V+L + + +V EY+ G+L + DV P W
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV----PEKWAK----- 177
Query: 293 LGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG 352
TA+ + L ++HRD+K N+LLDK + KL+DFG + +G
Sbjct: 178 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVG 237
Query: 353 TFGYVAPEYAST----GMLNERSDVYSFGILIMEVISGRNP 389
T Y++PE + G D +S G+ + E++ G P
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 153
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 154 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 206
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 151
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 204
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT----FEYLH 151
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 204
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 144
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 145 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIIL 197
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G YG V Y L VAVK L + A + ++ E+ + ++H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
L E L ++ L+ E ++ +GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA-- 150
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGM 366
++HRD+K SN+ +++ ++ DFGLA+ E + YV TR Y APE M
Sbjct: 151 -GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWM 204
Query: 367 -LNERSDVYSFGILIMEVISGR 387
N+ D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 15/174 (8%)
Query: 221 NRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWL--HGDVG 278
N +K F+ EV + H N+V+L LV EY G + +L HG
Sbjct: 53 NSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK 111
Query: 279 PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL 338
E R + Y H+ +VHRD+K+ N+LLD N K++DFG +
Sbjct: 112 EK-----EARAKF-RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNE 162
Query: 339 LGAERSYVTTRVMGTFGYVAPE-YASTGMLNERSDVYSFGILIMEVISGRNPVD 391
G Y APE + DV+S G+++ ++SG P D
Sbjct: 163 FTFGNK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 145
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 146 S---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 198
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P +P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 244 LVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH 303
LV+L + ++ +V EY+ G + L P I+L YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158
Query: 304 EGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS 363
+++RD+K N+L+D+Q +++DFG AK + T + GT Y+APE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIL 211
Query: 364 TGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
+ N+ D ++ G+LI E+ +G P P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 20/210 (9%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLG 249
IG G +G+ ++ D N VAVK + RG+ ++ K E+ +RH N+VR
Sbjct: 26 IGSGNFGVA--RLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKE 81
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
H +V EY G L + + + G S ++ G++Y H +
Sbjct: 82 VILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---Q 134
Query: 310 VVHRDIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
V HRD+K N LLD P K+ DFG +K +T +GT Y+APE
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 192
Query: 368 NER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 193 DGKVADVWSCGVTLYVMLVGAYPFEDPEEP 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q K++DFG AK + T + GT Y+A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLA 207
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLG 249
IG G +G+ ++ D N VAVK + RG+ ++ K E+ +RH N+VR
Sbjct: 27 IGAGNFGVA--RLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
H +V EY G L + + + G S ++ G++Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLIS---GVSYAHAM---Q 135
Query: 310 VVHRDIKSSNILLDKQWNP--KLSDFGLAK---LLGAERSYVTTRVMGTFGYVAPEYAST 364
V HRD+K N LLD P K++DFG +K L +S V GT Y+APE
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-----GTPAYIAPEVLLK 190
Query: 365 GMLNER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEF-KVEVEA-IGRV-RHKNLVRLLGY 250
+G+G + +V V ++N + + ++ K+E EA I R+ +H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E H L+++ + G L + D+ + + I + + + H+ V
Sbjct: 79 ISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQM---GV 131
Query: 311 VHRDIKSSNILLDKQWN---PKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHR++K N+LL + KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDP 189
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 190 YGKPVDLWACGVILYILLVGYPP 212
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT Y+AP + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 194 IGEGGYGIV---YHGVLEDNTNVAVKNL---LNNRGQAEKEFKVEVEAIGRVRHKNLVRL 247
+G G YG V Y L VAVK L + A + ++ E+ + ++H+N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
L E L ++ L+ E ++ +GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-- 150
Query: 308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGM 366
++HRD+K SN+ +++ ++ DFGLA+ E + YV TR Y APE M
Sbjct: 151 -GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWM 204
Query: 367 -LNERSDVYSFGILIMEVISGR 387
N+ D++S G ++ E++ G+
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 170 LGWGHWYT--LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEK 227
L W +T ++E+++ F VIG G +G V +++ + +LN ++
Sbjct: 56 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 115
Query: 228 E----FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG--DVGPHS 281
F+ E + + + + L + H LV +Y G+L L D P
Sbjct: 116 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 175
Query: 282 PLTWEI-RMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG 340
+ I M + + + L Y VHRDIK N+LLD + +L+DFG +
Sbjct: 176 MARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 226
Query: 341 AERSYVTTRVMGTFGYVAPEYAST-----GMLNERSDVYSFGILIMEVISGRNP 389
+ + ++ +GT Y++PE G D +S G+ + E++ G P
Sbjct: 227 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 191 ENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLL 248
E+V+GEG + V + L + AVK + G EVE + + + H+N++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL-GTAKGLTYLHEGLE 307
+ E LV+E + G++ +H + E+ ++++ A L +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEASVVVQDVASALDFLH---N 129
Query: 308 PKVVHRDIKSSNILLD--KQWNP-KLSDFGLA---KLLGAERSYVTTRVM---GTFGYVA 358
+ HRD+K NIL + Q +P K+ DFGL KL G T ++ G+ Y+A
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 359 PEYA-----STGMLNERSDVYSFGILIMEVISGRNP 389
PE + ++R D++S G+++ ++SG P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 23/234 (9%)
Query: 170 LGWGHWYT--LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEK 227
L W +T ++E+++ F VIG G +G V +++ + +LN ++
Sbjct: 72 LEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR 131
Query: 228 E----FKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHG--DVGPHS 281
F+ E + + + + L + H LV +Y G+L L D P
Sbjct: 132 AETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED 191
Query: 282 PLTWEI-RMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG 340
+ I M + + + L Y VHRDIK N+LLD + +L+DFG +
Sbjct: 192 MARFYIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMN 242
Query: 341 AERSYVTTRVMGTFGYVAPEYAST-----GMLNERSDVYSFGILIMEVISGRNP 389
+ + ++ +GT Y++PE G D +S G+ + E++ G P
Sbjct: 243 DDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEA-IGRV-RHKNLVRLLGY 250
+G+G + +V + + A K + + A K+E EA I R+ +H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E LV++ + G L + D+ + + I + + + H +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESVNHCHLN---GI 124
Query: 311 VHRDIKSSNILL---DKQWNPKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHRD+K N+LL K KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDP 182
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEA-IGRV-RHKNLVRLLGY 250
+G+G + +V + + A K + + A K+E EA I R+ +H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKV 310
+E LV++ + G L + D+ + + I + + + H +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILESVNHCHLN---GI 124
Query: 311 VHRDIKSSNILL---DKQWNPKLSDFGLA-KLLGAERSYVTTRVMGTFGYVAPEYASTGM 366
VHRD+K N+LL K KL+DFGLA ++ G ++++ GT GY++PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPEVLRKDP 182
Query: 367 LNERSDVYSFGILIMEVISGRNP 389
+ D+++ G+++ ++ G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 41/241 (17%)
Query: 186 NGFADENVIGEGGYG-IVYHGVLEDNTNVAVKNLLNNRGQ-AEKEFKVEVEAIGRVRHKN 243
N E ++G G G +V+ G + VAVK +L + A E K+ E+ H N
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQGRP-VAVKRMLIDFCDIALMEIKLLTESDD---HPN 70
Query: 244 LVRLLGYCAEGAHRMLVYEY-IDNGNLEQWLHGDVGPHSPLTWEIRMN---IILGTAKGL 299
++R YC+E R L + N NL+ + L + N ++ A G+
Sbjct: 71 VIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 300 TYLHEGLEPKVVHRDIKSSNILL--------DKQWNPK-----LSDFGLAKLLGAERSYV 346
+LH K++HRD+K NIL+ D+Q + +SDFGL K L + +
Sbjct: 129 AHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 347 TTRV---MGTFGYVAPE-------YASTGMLNERSDVYSFGILIMEVIS-GRNPV--DYS 393
+ GT G+ APE + L D++S G + ++S G++P YS
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 394 R 394
R
Sbjct: 246 R 246
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 299 LTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
YLH +++RD+K N+++D+Q +++DFG AK + T + GT Y+A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLA 206
Query: 359 PEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP 395
PE + N+ D ++ G+LI E+ +G P +P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLL 248
+++G+G V+ G + ++ + NN + + + E E + ++ HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 249 GYCAEGA--HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
E H++L+ E+ G+L L + E + ++ G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLREN- 131
Query: 307 EPKVVHRDIKSSNILL----DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
+VHR+IK NI+ D Q KL+DFG A+ L + +V+ + GT Y+ P+
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMY 187
Query: 363 STGMLNE--------RSDVYSFGILIMEVISGRNP 389
+L + D++S G+ +G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 23/178 (12%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKE-----FKVEVEAIGRVRHKNLVRL 247
+GEG YG VY + N VA+K + R + E+E EV + ++H+N++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 248 LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLE 307
L++EY +N +L++++ D P ++ + + + G+ + H
Sbjct: 99 KSVIHHNHRLHLIFEYAEN-DLKKYM--DKNPD--VSMRVIKSFLYQLINGVNFCHSR-- 151
Query: 308 PKVVHRDIKSSNILL---DKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPE 360
+ +HRD+K N+LL D P K+ DFGLA+ G T ++ T Y PE
Sbjct: 152 -RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPE 207
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLG 249
IG G +G+ ++ D N VAVK + RG+ K E+ +RH N+VR
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSLRHPNIVRFKE 82
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
H +V EY G L + + + G S ++ G++Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---Q 135
Query: 310 VVHRDIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
V HRD+K N LLD P K+ DFG +K +T +GT Y+APE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 193
Query: 368 NER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 20/255 (7%)
Query: 147 AAGSHHGSGDQTVAAAITPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYG---IVY 203
AA + GS ++V + W T + + F +G G +G +V
Sbjct: 3 AAAAKKGSEQESVKEFLAKAKEDF-LKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61
Query: 204 HGVLEDNTNVAVKNLLNNRGQAEKEFK---VEVEAIGRVRHKNLVRLLGYCAEGAHRMLV 260
H E + A+K L + K+ + E + V LV+L + ++ +V
Sbjct: 62 HK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI 320
EY+ G + L P I+L YLH +++RD+K N+
Sbjct: 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENL 172
Query: 321 LLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILI 380
L+D+Q +++DFG AK + T + GT +APE + N+ D ++ G+LI
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228
Query: 381 MEVISGRNPVDYSRP 395
E+ +G P +P
Sbjct: 229 YEMAAGYPPFFADQP 243
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT---NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGY 250
+G G +G V+ +ED AVK + +AE E+ A + +V L G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGA 153
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA-KGLTYLHEGLEPK 309
EG + E ++ G+L Q + E R LG A +GL YLH +
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVK-----EQGCLPEDRALYYLGQALEGLEYLHSR---R 205
Query: 310 VVHRDIKSSNILLDKQWN-PKLSDFGLAKLL---GAERSYVT-TRVMGTFGYVAPEYAST 364
++H D+K+ N+LL + L DFG A L G +S +T + GT ++APE
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 365 GMLNERSDVYSFGILIMEVISGRNP 389
+ + DV+S +++ +++G +P
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 37/219 (16%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKE-FKV----EVEAIGRVRHKNLVRL 247
IG+G +G V+ + VA+K +L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL---MENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYCAEGAHRM--------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+ C A LV+++ ++ +L L + + + M ++L GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GL 138
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGY 356
Y+H K++HRD+K++N+L+ + KL+DFGLA+ ++ R T Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 357 VAPEYASTGMLNERS-----DVYSFGILIMEVISGRNPV 390
PE +L ER D++ G ++ E+ + R+P+
Sbjct: 196 RPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 12/218 (5%)
Query: 181 LEVSTNGFADENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNN-RGQAEKEFKVEVEAIGR 238
+EV + +G G YG+V + +AVK + Q +K ++++ R
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 239 -VRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAK 297
V V G + E +D +L+++ + + +I I + K
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 298 GLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
L +LH L V+HRD+K SN+L++ K+ DFG++ L + + G Y+
Sbjct: 121 ALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYM 176
Query: 358 APEYASTGM----LNERSDVYSFGILIMEVISGRNPVD 391
APE + + + +SD++S GI ++E+ R P D
Sbjct: 177 APERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 24/215 (11%)
Query: 192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLL 248
+++G+G V+ G + ++ + NN + + + E E + ++ HKN+V+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMR-EFEVLKKLNHKNIVKLF 73
Query: 249 GYCAEGA--HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL 306
E H++L+ E+ G+L L + E + ++ G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI-VLRDVVGGMNHLREN- 131
Query: 307 EPKVVHRDIKSSNILL----DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA 362
+VHR+IK NI+ D Q KL+DFG A+ L + +V + GT Y+ P+
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMY 187
Query: 363 STGMLNE--------RSDVYSFGILIMEVISGRNP 389
+L + D++S G+ +G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 37/219 (16%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKE-FKV----EVEAIGRVRHKNLVRL 247
IG+G +G V+ + VA+K +L + EKE F + E++ + ++H+N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 81
Query: 248 LGYCAEGAHRM--------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+ C A LV+++ ++ +L L + + + M ++L GL
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GL 137
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGY 356
Y+H K++HRD+K++N+L+ + KL+DFGLA+ ++ R T Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 357 VAPEYASTGMLNERS-----DVYSFGILIMEVISGRNPV 390
PE +L ER D++ G ++ E+ + R+P+
Sbjct: 195 RPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 194 IGEGGYGIVYHGVLED--------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLV 245
+G+G + ++ GV + T V +K L + F + ++ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG 305
G C G +LV E++ G+L+ +L + + L W++ + L A +H
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAAA-----MHFL 129
Query: 306 LEPKVVHRDIKSSNILL-----DKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGYV 357
E ++H ++ + NILL K NP KLSD G++ + + + R+ +V
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERI----PWV 184
Query: 358 APEYASTGM-LNERSDVYSFGILIMEVISG 386
PE LN +D +SFG + E+ SG
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNER 370
HRD+K NIL+ L DFG+A E+ +GT Y APE S R
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 371 SDVYSFGILIMEVISGRNP 389
+D+Y+ ++ E ++G P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLG 249
IG G +G+ ++ D N VAVK + RG+ ++ K E+ +RH N+VR
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
H +V EY G L + + + G S ++ G++Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---Q 135
Query: 310 VVHRDIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML 367
V HRD+K N LLD P K+ FG +K +T +GT Y+APE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEY 193
Query: 368 NER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 194 DGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 186 NGFADENVIGEGGYGIVYHGVLEDNT--NVAVKNLLNNRGQAE----KEFKVEVEAIGRV 239
+ + +++IG G YG VY + NT NVA+K + NR + K E+ + R+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAY-DKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRL 82
Query: 240 RHKNLVRLLGYCAEG----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGT 295
+ ++RL + + I + +L++ + LT E I+
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF----LTEEHIKTILYNL 138
Query: 296 AKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
G ++HE ++HRD+K +N LL++ + K+ DFGLA+ + +E+
Sbjct: 139 LLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 37/219 (16%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKE-FKV----EVEAIGRVRHKNLVRL 247
IG+G +G V+ + VA+K +L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYCAEGAHRM--------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+ C A LV+++ ++ +L L + + + M ++L GL
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GL 138
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGY 356
Y+H K++HRD+K++N+L+ + KL+DFGLA+ ++ R T Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 357 VAPEYASTGMLNERS-----DVYSFGILIMEVISGRNPV 390
PE +L ER D++ G ++ E+ + R+P+
Sbjct: 196 RPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 37/219 (16%)
Query: 194 IGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKE-FKV----EVEAIGRVRHKNLVRL 247
IG+G +G V+ + VA+K +L + EKE F + E++ + ++H+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLM---ENEKEGFPITALREIKILQLLKHENVVNL 82
Query: 248 LGYCAEGAHRM--------LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGL 299
+ C A LV+++ ++ +L L + + + M ++L GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLN---GL 138
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG---TFGY 356
Y+H K++HRD+K++N+L+ + KL+DFGLA+ ++ R T Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 357 VAPEYASTGMLNERS-----DVYSFGILIMEVISGRNPV 390
PE +L ER D++ G ++ E+ + R+P+
Sbjct: 196 RPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 97/248 (39%), Gaps = 58/248 (23%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLN-------NRGQAEKEFKVEVEAIGRVRHKNLVR 246
IG+G YG+V + + ++N N E+ K EV + ++ H N+ R
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLHHPNIAR 92
Query: 247 LLGYCAEGAHRMLVYEYIDNGNL-------------------------------EQWLHG 275
L + + LV E G+L E+ ++G
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 276 DV-GPHSPLTWEIR----MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL--DKQWNP 328
+ G L + R NI+ L YLH + HRDIK N L +K +
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEI 209
Query: 329 KLSDFGLAK---LLGAERSYVTTRVMGTFGYVAPEYASTGMLNE----RSDVYSFGILIM 381
KL DFGL+K L Y T GT +VAPE +T NE + D +S G+L+
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT--NESYGPKCDAWSAGVLLH 267
Query: 382 EVISGRNP 389
++ G P
Sbjct: 268 LLLMGAVP 275
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 191 ENVIGEGGYGIVYHGV-LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLL 248
E+V+GEG + V + L + AVK + G EVE + + + H+N++ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIIL-GTAKGLTYLHEGLE 307
+ E LV+E + G++ +H + E+ ++++ A L +LH
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEASVVVQDVASALDFLHNK-- 130
Query: 308 PKVVHRDIKSSNILLD--KQWNP-KLSDFGLA---KLLGAERSYVTTRVM---GTFGYVA 358
+ HRD+K NIL + Q +P K+ DF L KL G T ++ G+ Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 359 PEYA-----STGMLNERSDVYSFGILIMEVISGRNP 389
PE + ++R D++S G+++ ++SG P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 30/211 (14%)
Query: 194 IGEGGYGIVYHGVLED--------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLV 245
+G+G + ++ GV + T V +K L + F + ++ HK+LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY-LHE 304
G C G +LV E++ G+L+ +L + + L W+ L AK L + +H
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WK------LEVAKQLAWAMHF 128
Query: 305 GLEPKVVHRDIKSSNILL-----DKQWNP---KLSDFGLAKLLGAERSYVTTRVMGTFGY 356
E ++H ++ + NILL K NP KLSD G++ + + + R+ +
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERI----PW 183
Query: 357 VAPEYASTGM-LNERSDVYSFGILIMEVISG 386
V PE LN +D +SFG + E+ SG
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
EV + ++ H N+++L + + + LV E G L ++ + E+ +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFS-EVDAAV 108
Query: 292 ILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVT 347
I+ G TYLH+ +VHRD+K N+LL+ + K+ DFGL+ E
Sbjct: 109 IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKM 163
Query: 348 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+GT Y+APE +E+ DV+S G+++ ++ G P
Sbjct: 164 KERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNI 291
EV + ++ H N+++L + + + LV E G L ++ + E+ +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFS-EVDAAV 125
Query: 292 ILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP---KLSDFGLAKLLGAERSYVT 347
I+ G TYLH+ +VHRD+K N+LL+ + K+ DFGL+ E
Sbjct: 126 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKM 180
Query: 348 TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+GT Y+APE +E+ DV+S G+++ ++ G P
Sbjct: 181 KERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPP 221
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%)
Query: 194 IGEGGYGIVYHGVLEDNT---NVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGY 250
+G G +G V+ +ED AVK + +AE E+ A + +V L G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGA 134
Query: 251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA-KGLTYLHEGLEPK 309
EG + E ++ G+L Q + E R LG A +GL YLH +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVK-----EQGCLPEDRALYYLGQALEGLEYLHSR---R 186
Query: 310 VVHRDIKSSNILLDKQWN-PKLSDFGLAKLL---GAERSYVT-TRVMGTFGYVAPEYAST 364
++H D+K+ N+LL + L DFG A L G + +T + GT ++APE
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 365 GMLNERSDVYSFGILIMEVISGRNP 389
+ + DV+S +++ +++G +P
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 186 NGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAE----KEFKVEVEAIGRVR 240
+ + +++IG G YG VY ++ N NVA+K + NR + K E+ + R++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLK 85
Query: 241 HKNLVRLLGYCAE----GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA 296
++RL + + I + +L++ + I N++LG
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEK 145
Query: 297 KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS 344
++HE ++HRD+K +N LL++ + K+ DFGLA+ + +++
Sbjct: 146 ----FIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 194 IGEGGYGIVYHGVLED---NTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLG 249
IG G +G+ ++ D N VAVK + RG+ ++ K E+ +RH N+VR
Sbjct: 27 IGSGNFGVA--RLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK 309
H +V EY G L + + + G S ++ G++Y H +
Sbjct: 83 VILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARFFFQQLIS---GVSYCHAM---Q 135
Query: 310 VVHRDIKSSNILLDKQWNP--KLSDFGLAK--LLGAERSYVTTRVMGTFGYVAPEYASTG 365
V HRD+K N LLD P K+ FG +K +L ++ +GT Y+APE
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ----PKDTVGTPAYIAPEVLLKK 191
Query: 366 MLNER-SDVYSFGILIMEVISGRNPVDYSRPP 396
+ + +DV+S G+ + ++ G P + P
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEP 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 229 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEI 287
F+VE + A + +V L G EG + E ++ G+L Q + E
Sbjct: 96 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-----QMGCLPED 150
Query: 288 RMNIILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-PKLSDFGLAKLL---GAE 342
R LG A +GL YLH +++H D+K+ N+LL + L DFG A L G
Sbjct: 151 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207
Query: 343 RSYVT-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP-VDYSRPP 396
+S +T + GT ++APE + + D++S +++ +++G +P Y R P
Sbjct: 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 229 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEI 287
F+VE + A + +V L G EG + E ++ G+L Q + E
Sbjct: 110 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-----QMGCLPED 164
Query: 288 RMNIILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-PKLSDFGLAKLL---GAE 342
R LG A +GL YLH +++H D+K+ N+LL + L DFG A L G
Sbjct: 165 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 221
Query: 343 RSYVT-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP-VDYSRPP 396
+S +T + GT ++APE + + D++S +++ +++G +P Y R P
Sbjct: 222 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 229 FKVE-VEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEI 287
F+VE + A + +V L G EG + E ++ G+L Q + E
Sbjct: 112 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK-----QMGCLPED 166
Query: 288 RMNIILGTA-KGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-PKLSDFGLAKLL---GAE 342
R LG A +GL YLH +++H D+K+ N+LL + L DFG A L G
Sbjct: 167 RALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 223
Query: 343 RSYVT-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP-VDYSRPP 396
+S +T + GT ++APE + + D++S +++ +++G +P Y R P
Sbjct: 224 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVL--EDNT--NVAVKNLLNNRGQAE--KEFKV 231
L ++ + F ++G+G +G V L ED + VAVK L + + +EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 232 EVEAIGRVRHKNLVRLLGYCAEGAHR------MLVYEYIDNGNLEQWLHGDVGPHSP--L 283
E + H ++ +L+G + M++ ++ +G+L +L +P L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 284 TWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER 343
+ + ++ A G+ YL +HRD+ + N +L + ++DFGL++ + +
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 344 SY---VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP 389
Y +++ ++A E + + SDV++FG+ + E+++ G+ P
Sbjct: 192 YYRQGCASKL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 30/229 (13%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAE----------- 226
+ EL + + + I G YG V GV + VA+K + N
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 227 KEFKVEVEAIGRVRHKNLVRL----LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSP 282
K E+ + H N++ L + + H++ + + +L Q +H SP
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
+ M IL GL LHE VVHRD+ NILL + + DF LA+ A+
Sbjct: 134 QHIQYFMYHIL---LGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 343 RS---YVTTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISGR 387
+ YVT R Y APE + D++S G ++ E+ + +
Sbjct: 188 ANKTHYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 194 IGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE 253
+G G +GIV+ V + + + +G + K E+ + RH+N++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHR 313
++++E+I ++ + ++ L ++ + + L +LH + H
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFE---LNEREIVSYVHQVCEALQFLHSH---NIGHF 126
Query: 314 DIKSSNILLDKQWNP--KLSDFGLAKLLGAERSYVTTRVMGTF-GYVAPEYASTGMLNER 370
DI+ NI+ + + K+ +FG A+ L ++ R++ T Y APE +++
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTA 183
Query: 371 SDVYSFGILIMEVISGRNP 389
+D++S G L+ ++SG NP
Sbjct: 184 TDMWSLGTLVYVLLSGINP 202
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 92/229 (40%), Gaps = 30/229 (13%)
Query: 178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAE----------- 226
+ EL + + + I G YG V GV + VA+K + N
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 227 KEFKVEVEAIGRVRHKNLVRL----LGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSP 282
K E+ + H N++ L + + H++ + + +L Q +H SP
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 283 LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE 342
+ M IL GL LHE VVHRD+ NILL + + DF LA+ A+
Sbjct: 134 QHIQYFMYHIL---LGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTAD 187
Query: 343 RS---YVTTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISGR 387
+ YVT R Y APE + D++S G ++ E+ + +
Sbjct: 188 ANKTHYVTHR-----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 289 MNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW---NPKLSDFGLAKLLGAERSY 345
+ +I +G+ YLH+ +VH D+K NILL + + K+ DFG+++ +G +
Sbjct: 134 IRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--HAC 188
Query: 346 VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP 389
+MGT Y+APE + + +D+++ GI+ +++ +P
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 243 NLVRLLGYCAEGAHRM--LVYEYIDNGNLEQWLHGDVGPHSPLT-WEIRMNIILGTAKGL 299
N+++L+ + + LV+EYI+N + +Q + LT ++IR + K L
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL-------YQILTDFDIRF-YMYELLKAL 145
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
Y H ++HRD+K N+++D Q +L D+GLA+ + Y RV + +
Sbjct: 146 DYCHSK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY-FKG 200
Query: 359 PE-YASTGMLNERSDVYSFGILIMEVISGRNPV 390
PE M + D++S G ++ +I R P
Sbjct: 201 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 243 NLVRLLGYCAEGAHRM--LVYEYIDNGNLEQWLHGDVGPHSPLT-WEIRMNIILGTAKGL 299
N+++L+ + + LV+EYI+N + +Q + LT ++IR + K L
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL-------YQILTDFDIRF-YMYELLKAL 150
Query: 300 TYLHEGLEPKVVHRDIKSSNILLDKQWNP-KLSDFGLAKLLGAERSYVTTRVMGTFGYVA 358
Y H ++HRD+K N+++D Q +L D+GLA+ + Y RV + +
Sbjct: 151 DYCHSK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEY-NVRVASRY-FKG 205
Query: 359 PE-YASTGMLNERSDVYSFGILIMEVISGRNPV 390
PE M + D++S G ++ +I R P
Sbjct: 206 PELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,117,086
Number of Sequences: 62578
Number of extensions: 613485
Number of successful extensions: 3637
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 1192
Number of HSP's gapped (non-prelim): 1113
length of query: 521
length of database: 14,973,337
effective HSP length: 103
effective length of query: 418
effective length of database: 8,527,803
effective search space: 3564621654
effective search space used: 3564621654
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)