Query         009979
Match_columns 521
No_of_seqs    467 out of 2934
Neff          8.7 
Searched_HMMs 29240
Date          Mon Mar 25 17:12:40 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009979hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 5.4E-57 1.8E-61  448.7  20.5  261  183-462    10-287 (299)
  2 4aoj_A High affinity nerve gro 100.0 3.1E-56 1.1E-60  449.2  23.9  261  183-462    38-317 (329)
  3 3omv_A RAF proto-oncogene seri 100.0 2.4E-56 8.1E-61  444.6  21.1  264  181-466    31-302 (307)
  4 4gt4_A Tyrosine-protein kinase 100.0 3.9E-56 1.3E-60  444.4  21.1  261  183-462    23-304 (308)
  5 4fih_A Serine/threonine-protei 100.0   2E-55 6.9E-60  443.6  21.6  249  186-457    74-323 (346)
  6 4b9d_A Serine/threonine-protei 100.0 1.3E-55 4.6E-60  445.5  19.3  252  185-458    23-277 (350)
  7 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.5E-55 1.5E-59  434.7  16.6  248  186-457    32-284 (311)
  8 4fie_A Serine/threonine-protei 100.0 5.2E-54 1.8E-58  443.7  24.6  249  185-457   150-400 (423)
  9 4g3f_A NF-kappa-beta-inducing  100.0 2.6E-54 8.8E-59  434.2  21.7  251  185-461    57-313 (336)
 10 4ase_A Vascular endothelial gr 100.0 2.1E-54 7.1E-59  439.5  20.0  268  176-461    54-344 (353)
 11 3fpq_A Serine/threonine-protei 100.0   8E-54 2.7E-58  423.3  23.5  246  189-457    29-282 (290)
 12 3hmm_A TGF-beta receptor type- 100.0   5E-54 1.7E-58  429.3  20.8  263  187-461     4-294 (303)
 13 3hyh_A Carbon catabolite-derep 100.0 1.7E-53 5.9E-58  417.4  21.0  246  186-458    13-263 (275)
 14 3ubd_A Ribosomal protein S6 ki 100.0 8.6E-54 2.9E-58  425.2  13.4  248  185-457    23-281 (304)
 15 4g31_A Eukaryotic translation  100.0 6.7E-52 2.3E-56  412.5  20.7  249  187-457     6-279 (299)
 16 2qkw_B Protein kinase; three-h 100.0 2.9E-49   1E-53  398.0  25.5  284  176-462    29-313 (321)
 17 3uim_A Brassinosteroid insensi 100.0 1.1E-49 3.7E-54  401.8  21.5  295  170-464    14-311 (326)
 18 4b99_A Mitogen-activated prote 100.0 4.9E-49 1.7E-53  406.6  24.2  261  186-458    54-345 (398)
 19 3uto_A Twitchin; kinase, muscl 100.0 1.5E-48 5.1E-53  421.7  23.1  252  186-458   157-411 (573)
 20 4f9c_A Cell division cycle 7-r 100.0 1.4E-48 4.8E-53  398.8  21.4  197  185-393    20-250 (361)
 21 3v5w_A G-protein coupled recep 100.0 6.3E-48 2.1E-52  415.8  23.5  254  183-460   186-452 (689)
 22 3s95_A LIMK-1, LIM domain kina 100.0 7.6E-46 2.6E-50  371.1  22.7  256  184-462     8-280 (310)
 23 3fxz_A Serine/threonine-protei 100.0 2.3E-45 7.9E-50  365.9  23.6  251  185-458    19-270 (297)
 24 3p86_A Serine/threonine-protei 100.0 3.9E-45 1.3E-49  366.4  23.6  264  178-462    29-296 (309)
 25 3sxs_A Cytoplasmic tyrosine-pr 100.0   4E-45 1.4E-49  357.9  22.7  259  182-463     4-263 (268)
 26 3zgw_A Maternal embryonic leuc 100.0 1.7E-45 5.7E-50  374.8  20.6  252  183-458     7-261 (347)
 27 4hcu_A Tyrosine-protein kinase 100.0 1.4E-45 4.7E-50  361.5  18.8  258  182-462     6-264 (269)
 28 2psq_A Fibroblast growth facto 100.0 2.4E-45 8.3E-50  377.2  20.2  262  182-462    77-362 (370)
 29 3gen_A Tyrosine-protein kinase 100.0 2.2E-45 7.6E-50  362.6  18.8  259  181-462    19-278 (283)
 30 3kul_A Ephrin type-A receptor  100.0 4.4E-45 1.5E-49  368.6  21.3  258  183-462    46-311 (325)
 31 3fe3_A MAP/microtubule affinit 100.0 1.7E-45 5.7E-50  372.2  18.2  249  184-458    13-265 (328)
 32 3soc_A Activin receptor type-2 100.0 2.3E-45 7.8E-50  370.1  18.9  270  182-462    20-316 (322)
 33 4eqm_A Protein kinase; transfe 100.0 9.1E-45 3.1E-49  360.9  20.9  261  184-463     9-274 (294)
 34 1o6l_A RAC-beta serine/threoni 100.0 6.2E-45 2.1E-49  369.3  19.8  252  184-460     3-263 (337)
 35 1qcf_A Haematopoetic cell kina 100.0 2.4E-45 8.2E-50  387.5  17.3  263  178-463   180-443 (454)
 36 2yab_A Death-associated protei 100.0   2E-44 6.9E-49  368.9  22.6  252  185-458    11-273 (361)
 37 3lb7_A RAF proto-oncogene seri 100.0 2.1E-44 7.3E-49  360.7  22.2  263  181-465    31-301 (307)
 38 3tki_A Serine/threonine-protei 100.0 1.5E-44 5.1E-49  364.5  20.3  253  185-458     6-262 (323)
 39 3q4u_A Activin receptor type-1 100.0 2.6E-44   9E-49  357.7  21.8  261  184-462     6-300 (301)
 40 3ugc_A Tyrosine-protein kinase 100.0 1.5E-44 5.1E-49  359.0  19.9  265  183-462     7-289 (295)
 41 3cbl_A C-FES, proto-oncogene t 100.0 4.1E-45 1.4E-49  376.4  16.4  261  180-462   108-372 (377)
 42 2c30_A Serine/threonine-protei 100.0 8.2E-44 2.8E-48  358.7  25.1  247  188-458    47-295 (321)
 43 3niz_A Rhodanese family protei 100.0 1.9E-44 6.4E-49  361.7  20.3  263  184-457    19-300 (311)
 44 1opk_A P150, C-ABL, proto-onco 100.0 2.3E-45   8E-50  391.5  14.3  264  178-463   212-477 (495)
 45 2nru_A Interleukin-1 receptor- 100.0 1.4E-43 4.9E-48  353.8  26.2  278  176-462    15-304 (307)
 46 2qol_A Ephrin receptor; recept 100.0 9.4E-45 3.2E-49  373.2  17.9  258  183-462    42-307 (373)
 47 1nxk_A MAP kinase-activated pr 100.0 3.5E-44 1.2E-48  372.4  22.0  251  187-459    62-323 (400)
 48 4aw2_A Serine/threonine-protei 100.0 9.4E-45 3.2E-49  379.9  17.8  266  177-460    65-341 (437)
 49 3v8s_A RHO-associated protein  100.0 1.4E-44 4.9E-49  375.7  18.9  266  177-463    60-335 (410)
 50 1mp8_A Focal adhesion kinase 1 100.0 8.8E-45   3E-49  358.2  16.1  261  179-462     8-274 (281)
 51 3c0i_A Peripheral plasma membr 100.0 2.9E-44   1E-48  366.5  20.4  255  186-458    24-287 (351)
 52 3t9t_A Tyrosine-protein kinase 100.0 1.8E-44 6.2E-49  352.6  18.0  258  182-462     4-262 (267)
 53 4euu_A Serine/threonine-protei 100.0 1.3E-43 4.5E-48  356.4  24.7  274  184-465     7-310 (319)
 54 4fr4_A YANK1, serine/threonine 100.0 7.9E-44 2.7E-48  367.0  23.6  253  183-458    12-272 (384)
 55 1luf_A Muscle-specific tyrosin 100.0 2.5E-44 8.5E-49  364.8  19.3  268  178-464    39-335 (343)
 56 1tki_A Titin; serine kinase, m 100.0   7E-44 2.4E-48  359.3  22.3  253  185-459     4-259 (321)
 57 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-44 4.2E-49  381.8  17.5  263  178-463   176-439 (452)
 58 3vhe_A Vascular endothelial gr 100.0 2.1E-44 7.1E-49  367.9  18.7  268  177-462    13-353 (359)
 59 3tt0_A Basic fibroblast growth 100.0 4.3E-44 1.5E-48  369.5  21.1  263  181-462    64-350 (382)
 60 2w4o_A Calcium/calmodulin-depe 100.0 4.9E-44 1.7E-48  364.6  21.0  254  182-458    49-306 (349)
 61 3op5_A Serine/threonine-protei 100.0 3.1E-44 1.1E-48  368.0  19.6  267  183-462    32-327 (364)
 62 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.4E-44 4.8E-49  369.0  16.7  252  183-459    20-282 (353)
 63 2izr_A Casein kinase I isoform 100.0 3.5E-44 1.2E-48  362.5  19.4  259  185-462     8-279 (330)
 64 1kob_A Twitchin; kinase, intra 100.0 1.3E-43 4.5E-48  366.1  24.1  252  186-458    51-305 (387)
 65 2y0a_A Death-associated protei 100.0 1.1E-43 3.6E-48  358.6  22.9  252  186-459    11-273 (326)
 66 1k9a_A Carboxyl-terminal SRC k 100.0 3.6E-44 1.2E-48  378.0  20.2  256  179-462   186-443 (450)
 67 3p1a_A MYT1 kinase, membrane-a 100.0 2.1E-44 7.1E-49  361.3  17.2  248  182-457    53-304 (311)
 68 2bdw_A Hypothetical protein K1 100.0 5.7E-44   2E-48  365.9  20.8  252  185-458    28-285 (362)
 69 3dtc_A Mitogen-activated prote 100.0 1.1E-43 3.9E-48  347.9  22.0  256  182-461     3-270 (271)
 70 3kfa_A Tyrosine-protein kinase 100.0 1.6E-44 5.4E-49  357.2  16.0  263  178-462     5-269 (288)
 71 2ivs_A Proto-oncogene tyrosine 100.0   2E-44 6.9E-49  360.8  16.8  265  179-462    16-309 (314)
 72 1qpc_A LCK kinase; alpha beta  100.0   4E-44 1.4E-48  352.8  18.7  261  179-462     6-267 (279)
 73 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-44 6.4E-49  370.2  16.9  262  182-462    67-343 (367)
 74 4dc2_A Protein kinase C IOTA t 100.0 5.6E-44 1.9E-48  369.4  20.5  258  184-459    50-320 (396)
 75 1csn_A Casein kinase-1; phosph 100.0 1.4E-43 4.9E-48  351.9  22.4  262  183-462     7-281 (298)
 76 3soa_A Calcium/calmodulin-depe 100.0 1.3E-43 4.3E-48  372.5  22.9  253  185-458    10-268 (444)
 77 4f0f_A Serine/threonine-protei 100.0 1.3E-43 4.6E-48  350.5  21.3  254  183-461    16-286 (287)
 78 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-43 4.6E-48  352.8  21.4  249  185-457    12-292 (298)
 79 1ob3_A PFPK5, cell division co 100.0 1.6E-43 5.6E-48  350.5  21.9  261  186-457     2-280 (288)
 80 2vd5_A DMPK protein; serine/th 100.0 1.2E-44 4.2E-49  376.4  14.3  265  177-460    52-330 (412)
 81 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-43 4.9E-48  356.4  21.5  248  185-460     5-261 (318)
 82 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-44 1.1E-48  363.8  16.8  246  185-458     8-259 (336)
 83 1rjb_A FL cytokine receptor; k 100.0 2.4E-44 8.2E-49  365.4  15.9  267  180-464    39-334 (344)
 84 3a8x_A Protein kinase C IOTA t 100.0 1.2E-43   4E-48  361.2  20.8  256  185-458     8-276 (345)
 85 1t46_A HOMO sapiens V-KIT hard 100.0 3.2E-44 1.1E-48  359.1  16.0  265  180-462    17-305 (313)
 86 3qd2_B Eukaryotic translation  100.0 1.5E-43   5E-48  356.9  20.4  251  186-458     6-326 (332)
 87 2buj_A Serine/threonine-protei 100.0 4.3E-44 1.5E-48  359.2  16.4  268  182-466    25-308 (317)
 88 1xjd_A Protein kinase C, theta 100.0 1.9E-44 6.6E-49  366.7  13.9  251  182-457    13-269 (345)
 89 3qup_A Tyrosine-protein kinase 100.0 5.9E-44   2E-48  359.3  17.1  266  178-462    15-296 (323)
 90 3a62_A Ribosomal protein S6 ki 100.0 1.5E-43 5.1E-48  357.7  20.1  254  184-462    15-281 (327)
 91 3poz_A Epidermal growth factor 100.0 4.3E-44 1.5E-48  361.5  16.1  257  184-463    13-277 (327)
 92 1p4o_A Insulin-like growth fac 100.0 2.2E-43 7.4E-48  354.9  21.1  276  174-468    13-303 (322)
 93 2h8h_A Proto-oncogene tyrosine 100.0   3E-44   1E-48  386.5  15.7  263  178-463   259-522 (535)
 94 3og7_A AKAP9-BRAF fusion prote 100.0 2.3E-43 7.9E-48  349.6  20.8  263  181-463    19-287 (289)
 95 3uc3_A Serine/threonine-protei 100.0 8.9E-44 3.1E-48  364.3  18.1  253  184-458    18-275 (361)
 96 3o0g_A Cell division protein k 100.0 4.7E-43 1.6E-47  347.8  22.6  263  186-458     2-283 (292)
 97 2x4f_A Myosin light chain kina 100.0 2.4E-43 8.4E-48  362.6  21.2  249  189-458    92-343 (373)
 98 3llt_A Serine/threonine kinase 100.0 3.1E-43 1.1E-47  359.6  21.7  207  176-393    25-262 (360)
 99 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.8E-44   3E-48  362.7  17.5  249  184-460    39-296 (350)
100 4fvq_A Tyrosine-protein kinase 100.0 9.7E-44 3.3E-48  351.7  17.1  255  183-465     5-276 (289)
101 3dbq_A Dual specificity protei 100.0 2.5E-43 8.7E-48  358.3  20.3  255  182-459     5-275 (343)
102 2v62_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48  360.2  18.4  269  183-465    34-329 (345)
103 2pvf_A Fibroblast growth facto 100.0 3.5E-43 1.2E-47  355.7  21.0  263  181-462    30-316 (334)
104 3kmu_A ILK, integrin-linked ki 100.0 4.2E-43 1.4E-47  343.2  20.5  254  182-462     6-268 (271)
105 2wqm_A Serine/threonine-protei 100.0 8.7E-43   3E-47  348.7  23.1  261  185-462    31-295 (310)
106 4e5w_A Tyrosine-protein kinase 100.0 2.7E-43 9.4E-48  350.7  19.4  263  184-461    19-299 (302)
107 2i0e_A Protein kinase C-beta I 100.0 6.3E-43 2.2E-47  356.7  22.3  252  183-459    17-278 (353)
108 3cc6_A Protein tyrosine kinase 100.0 1.1E-43 3.9E-48  350.1  16.2  258  182-462     8-271 (281)
109 3gni_B Strad alpha; kinase fol 100.0 5.7E-43 1.9E-47  361.8  22.1  206  184-394    23-241 (389)
110 3kn6_A Ribosomal protein S6 ki 100.0 1.5E-43 5.2E-48  357.4  17.2  249  191-457    16-270 (325)
111 3mdy_A Bone morphogenetic prot 100.0 1.8E-42   6E-47  350.1  24.9  266  183-462    34-329 (337)
112 2h34_A Serine/threonine-protei 100.0 8.9E-43 3.1E-47  349.0  22.5  258  185-463    33-295 (309)
113 3ork_A Serine/threonine protei 100.0 1.7E-43 5.7E-48  354.5  17.1  254  184-457    10-273 (311)
114 1mqb_A Ephrin type-A receptor  100.0   8E-43 2.7E-47  353.2  22.1  260  182-463    40-308 (333)
115 3f3z_A Calcium/calmodulin-depe 100.0 7.5E-43 2.6E-47  343.4  21.1  249  186-457     9-261 (277)
116 3kex_A Receptor tyrosine-prote 100.0 1.2E-43 4.2E-48  357.8  15.6  257  184-463    11-275 (325)
117 3hko_A Calcium/calmodulin-depe 100.0 3.5E-43 1.2E-47  356.8  19.1  258  185-458    25-331 (345)
118 3fdn_A Serine/threonine-protei 100.0 2.8E-43 9.7E-48  346.9  17.8  248  184-458     7-258 (279)
119 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.5E-43 1.6E-47  359.4  19.8  257  178-461    57-336 (365)
120 1u59_A Tyrosine-protein kinase 100.0 6.5E-43 2.2E-47  345.9  20.2  258  182-462     5-270 (287)
121 4ejn_A RAC-alpha serine/threon 100.0 6.3E-44 2.2E-48  375.8  13.6  256  183-463   145-410 (446)
122 3lxl_A Tyrosine-protein kinase 100.0 1.5E-43   5E-48  357.3  15.8  266  184-464    21-303 (327)
123 2acx_A G protein-coupled recep 100.0 3.9E-43 1.3E-47  377.1  19.8  260  180-459   178-446 (576)
124 4agu_A Cyclin-dependent kinase 100.0 4.4E-43 1.5E-47  350.9  18.6  262  186-458     3-285 (311)
125 1vzo_A Ribosomal protein S6 ki 100.0   3E-43   1E-47  359.6  17.7  263  184-466    52-330 (355)
126 2a2a_A Death-associated protei 100.0 9.8E-43 3.4E-47  350.5  21.2  251  186-458    12-273 (321)
127 2y94_A 5'-AMP-activated protei 100.0 5.5E-43 1.9E-47  370.3  20.2  248  184-457    14-266 (476)
128 3cok_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47  341.0  22.3  248  186-457    11-262 (278)
129 4hgt_A Casein kinase I isoform 100.0 1.7E-42 5.7E-47  343.6  22.3  260  185-462     8-278 (296)
130 2i1m_A Macrophage colony-stimu 100.0 6.6E-44 2.3E-48  360.5  12.4  266  180-463    40-325 (333)
131 3kk8_A Calcium/calmodulin depe 100.0 2.2E-42 7.4E-47  341.2  22.9  252  185-458     5-262 (284)
132 2zmd_A Dual specificity protei 100.0 9.5E-43 3.3E-47  360.4  21.2  253  184-459    54-322 (390)
133 2qr7_A Ribosomal protein S6 ki 100.0   2E-43   7E-48  358.9  15.9  251  186-458    22-278 (342)
134 3ll6_A Cyclin G-associated kin 100.0 2.3E-43 7.7E-48  356.3  16.1  259  180-462    22-306 (337)
135 2eva_A TAK1 kinase - TAB1 chim 100.0 3.6E-43 1.2E-47  351.6  17.3  256  184-463     6-262 (307)
136 2ac3_A MAP kinase-interacting  100.0   4E-43 1.4E-47  352.0  17.6  260  186-458    12-296 (316)
137 3uzp_A CKI-delta, CKID, casein 100.0 2.8E-42 9.6E-47  342.2  23.4  260  185-462     8-278 (296)
138 2xir_A Vascular endothelial gr 100.0 7.8E-43 2.7E-47  349.5  19.3  267  178-462    19-308 (316)
139 2r5t_A Serine/threonine-protei 100.0 3.8E-43 1.3E-47  360.9  17.4  247  184-455    36-287 (373)
140 3is5_A Calcium-dependent prote 100.0 1.2E-42   4E-47  344.0  20.3  252  186-457    22-278 (285)
141 3lm5_A Serine/threonine-protei 100.0 1.3E-42 4.4E-47  350.7  21.0  261  178-458    20-288 (327)
142 2pmi_A Negative RE, cyclin-dep 100.0 5.4E-43 1.8E-47  352.0  18.0  265  185-457     4-293 (317)
143 3g2f_A Bone morphogenetic prot 100.0 3.4E-43 1.2E-47  355.6  16.4  274  183-467    10-321 (336)
144 1b6c_B TGF-B superfamily recep 100.0 2.4E-42 8.2E-47  350.1  22.6  263  182-462    38-334 (342)
145 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.3E-43 3.2E-47  373.0  20.5  260  182-458   181-449 (543)
146 2eue_A Carbon catabolite derep 100.0 4.8E-43 1.6E-47  344.5  16.8  246  185-457    12-262 (275)
147 1u5q_A Serine/threonine protei 100.0 2.4E-42 8.1E-47  352.0  22.4  247  186-459    54-307 (348)
148 3g33_A Cell division protein k 100.0 3.1E-43 1.1E-47  351.8  15.2  264  183-457     6-296 (308)
149 3lxp_A Non-receptor tyrosine-p 100.0 2.7E-42 9.3E-47  346.9  22.1  258  188-462    33-308 (318)
150 3oz6_A Mitogen-activated prote 100.0 3.9E-43 1.3E-47  362.9  16.2  200  185-393     8-234 (388)
151 1xbb_A Tyrosine-protein kinase 100.0 8.6E-43 2.9E-47  345.8  17.7  260  180-463    10-278 (291)
152 3brb_A Proto-oncogene tyrosine 100.0 7.4E-43 2.5E-47  349.7  17.3  266  178-462    26-306 (313)
153 3gxj_A TGF-beta receptor type- 100.0 2.6E-44 8.9E-49  357.9   6.6  260  186-463     3-296 (303)
154 2yex_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47  340.3  19.4  251  186-457     7-261 (276)
155 3f66_A Hepatocyte growth facto 100.0 2.4E-42 8.1E-47  343.4  20.6  255  186-462    25-289 (298)
156 3bhy_A Death-associated protei 100.0 1.1E-42 3.6E-47  343.2  17.9  250  186-457     5-265 (283)
157 3ttj_A Mitogen-activated prote 100.0 2.7E-42 9.3E-47  364.7  22.2  256  185-458    61-356 (464)
158 3dls_A PAS domain-containing s 100.0 7.3E-43 2.5E-47  353.9  16.9  242  186-459    24-276 (335)
159 3c1x_A Hepatocyte growth facto 100.0 9.3E-43 3.2E-47  358.2  17.8  255  187-463    90-354 (373)
160 2jam_A Calcium/calmodulin-depe 100.0 3.2E-42 1.1E-46  343.8  21.2  250  186-458     9-262 (304)
161 2ozo_A Tyrosine-protein kinase 100.0   6E-43   2E-47  381.9  17.3  258  182-462   331-596 (613)
162 3lzb_A Epidermal growth factor 100.0 7.8E-43 2.7E-47  352.4  16.8  257  184-463    13-277 (327)
163 3mtl_A Cell division protein k 100.0 8.6E-43 2.9E-47  351.6  16.9  261  186-457     2-281 (324)
164 3rp9_A Mitogen-activated prote 100.0 4.9E-42 1.7E-46  362.5  23.4  194  185-386    52-280 (458)
165 2jii_A Serine/threonine-protei 100.0   4E-43 1.4E-47  358.0  13.9  261  185-462    41-334 (352)
166 2w5a_A Serine/threonine-protei 100.0   8E-43 2.7E-47  343.3  15.6  256  186-461     6-271 (279)
167 4eut_A Serine/threonine-protei 100.0 2.6E-42 8.9E-47  357.9  20.0  271  184-462     7-307 (396)
168 2w1i_A JAK2; chromosomal rearr 100.0 2.6E-42 8.7E-47  348.2  19.2  264  184-462    39-320 (326)
169 3eqc_A Dual specificity mitoge 100.0 2.7E-42 9.1E-47  352.8  19.6  203  182-393    29-233 (360)
170 3pls_A Macrophage-stimulating  100.0 5.4E-42 1.9E-46  340.5  21.0  255  187-462    22-285 (298)
171 3i6u_A CDS1, serine/threonine- 100.0 1.6E-42 5.4E-47  362.1  17.7  253  185-459   134-401 (419)
172 1fvr_A Tyrosine-protein kinase 100.0 2.3E-42 7.8E-47  348.6  18.1  257  185-462    24-298 (327)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-42   4E-47  351.3  16.1  258  185-457    33-318 (329)
174 2vgo_A Serine/threonine-protei 100.0 2.8E-42 9.7E-47  340.6  18.5  247  184-457    12-262 (284)
175 2clq_A Mitogen-activated prote 100.0 4.7E-42 1.6E-46  340.4  19.9  256  183-457    19-278 (295)
176 3n9x_A Phosphotransferase; mal 100.0   7E-42 2.4E-46  358.7  22.3  199  185-391    25-253 (432)
177 1byg_A CSK, protein (C-termina 100.0 3.7E-43 1.3E-47  345.9  11.8  254  181-462    16-271 (278)
178 2rku_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47  342.5  18.2  249  185-458    14-266 (294)
179 3lij_A Calcium/calmodulin depe 100.0 5.9E-42   2E-46  365.4  22.0  249  186-457    37-291 (494)
180 2owb_A Serine/threonine-protei 100.0   2E-42 6.8E-47  350.5  17.1  248  185-457    40-291 (335)
181 2j7t_A Serine/threonine-protei 100.0 4.8E-42 1.6E-46  341.7  19.5  253  184-457    17-275 (302)
182 3q5i_A Protein kinase; CDPK, m 100.0 9.5E-42 3.2E-46  364.7  23.2  252  184-458    34-302 (504)
183 4aaa_A Cyclin-dependent kinase 100.0 1.8E-42 6.1E-47  350.1  16.7  263  185-458    24-307 (331)
184 2a19_B Interferon-induced, dou 100.0 2.1E-42 7.1E-47  340.9  16.7  247  186-464    11-274 (284)
185 3eb0_A Putative uncharacterize 100.0 2.6E-42 8.8E-47  356.3  18.1  265  181-457     2-321 (383)
186 2yfx_A Tyrosine-protein kinase 100.0 3.4E-42 1.2E-46  347.4  18.5  262  182-462    26-302 (327)
187 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.7E-43   2E-47  351.2  12.8  265  177-465    24-303 (319)
188 1t4h_A Serine/threonine-protei 100.0   2E-41 6.7E-46  335.6  23.6  249  185-458    25-283 (290)
189 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-41   5E-46  338.7  22.5  248  186-458    22-271 (303)
190 3fme_A Dual specificity mitoge 100.0 4.2E-42 1.4E-46  339.9  18.5  257  182-457     3-266 (290)
191 3nyv_A Calmodulin-domain prote 100.0 2.4E-42 8.2E-47  367.5  17.9  251  185-458    25-282 (484)
192 3byv_A Rhoptry kinase; malaria 100.0   2E-43   7E-48  363.7   9.2  244  184-457    71-359 (377)
193 1wak_A Serine/threonine-protei 100.0   1E-41 3.6E-46  352.1  21.7  272  176-457    27-391 (397)
194 2h6d_A 5'-AMP-activated protei 100.0 3.7E-42 1.3E-46  338.1  17.3  251  182-458     7-262 (276)
195 4fl3_A Tyrosine-protein kinase 100.0 3.3E-42 1.1E-46  377.2  18.6  246  192-461   375-628 (635)
196 3mi9_A Cell division protein k 100.0 4.7E-42 1.6E-46  349.7  18.3  262  186-458    17-312 (351)
197 3sv0_A Casein kinase I-like; t 100.0 1.6E-41 5.6E-46  359.6  23.1  260  185-462     6-276 (483)
198 3mwu_A Calmodulin-domain prote 100.0 9.6E-42 3.3E-46  363.0  21.4  250  186-458    22-277 (486)
199 2x7f_A TRAF2 and NCK-interacti 100.0 8.1E-42 2.8E-46  344.0  19.6  259  178-458    16-287 (326)
200 3an0_A Dual specificity mitoge 100.0 6.5E-42 2.2E-46  347.0  18.7  258  181-457    46-310 (340)
201 3pg1_A Mitogen-activated prote 100.0 5.6E-42 1.9E-46  350.6  18.3  269  178-458    14-317 (362)
202 3com_A Serine/threonine-protei 100.0 5.3E-41 1.8E-45  336.2  25.1  250  184-457    27-278 (314)
203 3q60_A ROP5B; pseudokinase, tr 100.0   3E-42   1E-46  354.2  16.0  252  186-457    62-352 (371)
204 2y7j_A Phosphorylase B kinase  100.0 1.8E-41 6.1E-46  347.8  21.8  252  185-458    93-360 (365)
205 1ua2_A CAK, cell division prot 100.0 8.2E-42 2.8E-46  347.6  19.0  262  184-459     8-293 (346)
206 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-41   4E-46  335.7  19.4  246  186-458    11-280 (289)
207 2xrw_A Mitogen-activated prote 100.0 1.8E-41   6E-46  348.5  21.5  257  185-459    24-320 (371)
208 1cm8_A Phosphorylated MAP kina 100.0 1.6E-41 5.5E-46  348.3  20.9  257  185-458    24-308 (367)
209 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-41 6.5E-46  373.6  22.9  252  182-458   337-598 (674)
210 1j1b_A Glycogen synthase kinas 100.0 1.6E-41 5.6E-46  354.6  20.7  261  186-458    54-337 (420)
211 1phk_A Phosphorylase kinase; g 100.0 4.1E-41 1.4E-45  334.3  22.6  251  185-457    16-283 (298)
212 2r3i_A Cell division protein k 100.0 3.6E-41 1.2E-45  334.9  22.1  259  186-457     3-283 (299)
213 3nsz_A CK II alpha, casein kin 100.0 4.1E-41 1.4E-45  339.5  22.8  258  185-458    35-320 (330)
214 1u46_A ACK-1, activated CDC42  100.0 7.9E-42 2.7E-46  338.1  16.8  258  184-463    16-283 (291)
215 2vwi_A Serine/threonine-protei 100.0 2.9E-42 9.8E-47  343.1  13.4  264  181-457    10-287 (303)
216 2ycf_A Serine/threonine-protei 100.0 1.1E-41 3.7E-46  342.9  17.8  251  186-458    10-275 (322)
217 2pml_X PFPK7, Ser/Thr protein  100.0 2.5E-41 8.5E-46  343.6  20.2  262  182-458    27-323 (348)
218 4e7w_A Glycogen synthase kinas 100.0 2.1E-41   7E-46  350.9  19.7  261  186-458    40-322 (394)
219 3qyz_A Mitogen-activated prote 100.0 4.3E-41 1.5E-45  344.7  21.9  262  185-458    26-314 (364)
220 2wtk_C Serine/threonine-protei 100.0 2.5E-41 8.4E-46  337.1  19.1  250  186-458     5-264 (305)
221 2j0j_A Focal adhesion kinase 1 100.0 1.9E-41 6.7E-46  372.4  19.2  262  178-462   382-649 (656)
222 3kvw_A DYRK2, dual specificity 100.0 2.9E-41 9.9E-46  353.6  19.6  200  183-393    94-302 (429)
223 3cek_A Dual specificity protei 100.0 4.9E-41 1.7E-45  336.6  20.3  260  176-458    18-293 (313)
224 1z57_A Dual specificity protei 100.0 4.6E-41 1.6E-45  339.4  20.1  264  180-457     8-328 (339)
225 2vx3_A Dual specificity tyrosi 100.0 1.1E-40 3.8E-45  343.9  22.6  207  178-393    46-261 (382)
226 1zy4_A Serine/threonine-protei 100.0   5E-41 1.7E-45  333.7  19.1  251  186-458     6-284 (303)
227 2fst_X Mitogen-activated prote 100.0 2.7E-41 9.3E-46  346.6  17.0  258  185-458    28-312 (367)
228 3rgf_A Cyclin-dependent kinase 100.0 3.8E-41 1.3E-45  350.1  17.0  202  187-394    21-240 (405)
229 2i6l_A Mitogen-activated prote 100.0 1.3E-40 4.3E-45  333.6  19.9  259  185-458    10-306 (320)
230 2wei_A Calmodulin-domain prote 100.0 1.3E-40 4.5E-45  329.3  19.5  250  185-457    21-276 (287)
231 1blx_A Cyclin-dependent kinase 100.0 2.7E-40 9.3E-45  332.7  21.9  263  184-457     9-296 (326)
232 3e3p_A Protein kinase, putativ 100.0 6.7E-41 2.3E-45  342.0  17.3  266  182-457    19-314 (360)
233 3fhr_A MAP kinase-activated pr 100.0   2E-40 6.9E-45  336.0  20.7  253  185-458    27-288 (336)
234 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-40 7.1E-45  337.5  20.7  262  185-458    10-306 (353)
235 4exu_A Mitogen-activated prote 100.0 1.7E-40 5.8E-45  341.2  19.9  254  185-458    41-324 (371)
236 1q8y_A SR protein kinase; tran 100.0   4E-40 1.4E-44  337.8  21.8  265  184-458    17-334 (373)
237 3aln_A Dual specificity mitoge 100.0 1.5E-40 5.1E-45  335.2  18.3  261  181-457    17-285 (327)
238 3a99_A Proto-oncogene serine/t 100.0 2.5E-41 8.6E-46  340.2  12.2  250  177-459    34-295 (320)
239 2rio_A Serine/threonine-protei 100.0   1E-40 3.6E-45  349.9  17.4  253  186-457    15-295 (434)
240 3coi_A Mitogen-activated prote 100.0 6.8E-40 2.3E-44  334.2  21.0  256  185-458    23-306 (353)
241 2eu9_A Dual specificity protei 100.0   1E-39 3.5E-44  331.9  20.8  263  181-457    14-333 (355)
242 2dyl_A Dual specificity mitoge 100.0 1.2E-39   4E-44  326.7  21.0  253  182-457    21-283 (318)
243 3p23_A Serine/threonine-protei 100.0 3.6E-40 1.2E-44  345.4  16.6  252  182-457    20-283 (432)
244 2iwi_A Serine/threonine-protei 100.0 2.5E-40 8.7E-45  331.1  13.7  244  182-458    27-284 (312)
245 2pzi_A Probable serine/threoni 100.0 4.8E-39 1.7E-43  355.8  18.4  241  182-461    76-325 (681)
246 3uqc_A Probable conserved tran 100.0 3.2E-38 1.1E-42  312.7  20.1  232  184-463    29-264 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 1.8E-39 6.2E-44  352.3  11.4  259  186-455    14-295 (676)
248 3dzo_A Rhoptry kinase domain;  100.0 5.4E-39 1.8E-43  334.7  11.3  244  183-457    75-363 (413)
249 3m2w_A MAP kinase-activated pr 100.0 8.4E-38 2.9E-42  311.3  19.0  228  187-458    18-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43  325.4   7.5  242  184-456    18-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.5E-32 8.5E-37  294.9   6.6  185  193-389   241-437 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 7.1E-29 2.4E-33  266.4   8.7  185  189-391   339-539 (540)
253 1zar_A RIO2 kinase; serine kin  99.9   7E-25 2.4E-29  216.2  10.6  152  180-364    84-253 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.4E-20 4.8E-25  183.0  11.4  137  187-339    48-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 4.7E-17 1.6E-21  165.2  11.4  139  184-339    93-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.4 9.6E-13 3.3E-17  127.4  11.4  143  186-338    14-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.3 6.6E-12 2.2E-16  120.9  10.8  137  187-338    21-214 (264)
258 3dxp_A Putative acyl-COA dehyd  99.1 1.5E-10   5E-15  117.5  10.2  142  190-338    42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 6.7E-11 2.3E-15  117.1   5.8  183  191-390    25-287 (304)
260 3r70_A Aminoglycoside phosphot  98.8   4E-08 1.4E-12   97.9  13.1  137  187-339    38-238 (320)
261 3tdw_A Gentamicin resistance p  98.6 3.6E-07 1.2E-11   90.4  14.0  137  191-339    24-225 (306)
262 3d1u_A Putative fructosamine-3  98.6 2.1E-07 7.1E-12   91.2  11.6   77  189-269    18-97  (288)
263 4gkh_A Aminoglycoside 3'-phosp  98.5 7.7E-07 2.6E-11   85.9  13.0  135  193-338    31-223 (272)
264 3ovc_A Hygromycin-B 4-O-kinase  98.4 1.2E-06   4E-11   88.8  11.4  146  188-339    43-244 (362)
265 3ats_A Putative uncharacterize  98.4 4.4E-07 1.5E-11   91.5   8.0   80  191-270    25-121 (357)
266 2q83_A YTAA protein; 2635576,   98.1 1.4E-05 4.8E-10   79.5  11.7  143  191-338    37-252 (346)
267 2olc_A MTR kinase, methylthior  98.1 1.2E-05   4E-10   82.3  11.0   75  191-267    35-120 (397)
268 3f7w_A Putative fructosamine-3  98.1 2.2E-05 7.4E-10   76.6  11.6   80  185-268    14-96  (288)
269 2pyw_A Uncharacterized protein  97.9 2.1E-05 7.3E-10   81.1   9.3   78  307-387   231-313 (420)
270 3jr1_A Putative fructosamine-3  97.9 5.4E-05 1.8E-09   74.8  11.5  141  189-334    39-232 (312)
271 3dxq_A Choline/ethanolamine ki  97.6 0.00021   7E-09   70.0   9.3  140  191-339    23-203 (301)
272 1nw1_A Choline kinase (49.2 KD  97.5 0.00033 1.1E-08   72.4  10.5   73  191-269    78-159 (429)
273 3csv_A Aminoglycoside phosphot  97.5  0.0007 2.4E-08   67.1  11.8  143  192-339    24-218 (333)
274 2ppq_A HSK, HK, homoserine kin  97.4 0.00062 2.1E-08   67.0  11.1  145  191-338    27-217 (322)
275 2qg7_A Ethanolamine kinase PV0  97.4  0.0011 3.8E-08   68.9  12.1   74  191-269   113-188 (458)
276 1zyl_A Hypothetical protein YI  97.3  0.0014 4.8E-08   64.6  11.9  143  192-338    32-223 (328)
277 3feg_A Choline/ethanolamine ki  97.3 0.00074 2.5E-08   68.4   9.9  142  192-338    56-254 (379)
278 3c5i_A Choline kinase; choline  97.1 0.00096 3.3E-08   67.2   8.5   74  191-269    38-121 (369)
279 2l2t_A Receptor tyrosine-prote  96.9 0.00092 3.1E-08   44.4   4.0   33   21-53      8-41  (44)
280 3i1a_A Spectinomycin phosphotr  96.9  0.0061 2.1E-07   60.6  12.2   31  308-338   206-236 (339)
281 2yle_A Protein spire homolog 1  96.9   0.005 1.7E-07   56.6  10.4  102  267-388    33-134 (229)
282 2jwa_A Receptor tyrosine-prote  96.8  0.0012   4E-08   43.8   3.8   28   22-49     11-38  (44)
283 2ks1_B Epidermal growth factor  96.8 0.00093 3.2E-08   44.5   3.0   28   25-52     14-41  (44)
284 3f2s_A CK, chetk-alpha, cholin  96.6    0.01 3.4E-07   60.4  11.3  143  192-338    58-280 (401)
285 2k1k_A Ephrin type-A receptor   96.3   0.005 1.7E-07   39.7   4.0   30   19-48      7-37  (38)
286 3mes_A Choline kinase; malaria  96.0   0.021 7.3E-07   58.5   9.4  142  191-338    75-291 (424)
287 2l34_A TYRO protein tyrosine k  95.5   0.017 5.9E-07   35.8   3.9   31   18-48      2-32  (33)
288 2k9y_A Ephrin type-A receptor   95.3   0.015   5E-07   38.4   3.4   27   22-48     13-39  (41)
289 2l8s_A Integrin alpha-1; trans  94.5   0.048 1.7E-06   37.7   4.4   26   19-44      6-31  (54)
290 2knc_A Integrin alpha-IIB; tra  94.1   0.069 2.3E-06   37.1   4.5   26   19-44      9-34  (54)
291 3g15_A CK, chetk-alpha, cholin  94.1    0.36 1.2E-05   48.9  12.0   30  309-338   245-280 (401)
292 2k1a_A Integrin alpha-IIB; sin  93.2    0.13 4.5E-06   33.7   4.4   26   19-44      7-32  (42)
293 1iij_A ERBB-2 receptor protein  90.6     0.1 3.5E-06   32.6   1.5   26   24-49      9-34  (35)
294 2klu_A T-cell surface glycopro  89.5    0.41 1.4E-05   34.2   4.0    6   39-44     24-29  (70)
295 2knc_B Integrin beta-3; transm  88.6    0.35 1.2E-05   36.6   3.5   27   19-45      7-33  (79)
296 1q55_A EP-cadherin, C-cadherin  87.9   0.098 3.4E-06   58.7   0.0   33   17-49    699-731 (880)
297 2k9j_B Integrin beta-3; transm  87.9    0.62 2.1E-05   30.8   3.9   27   19-45      6-32  (43)
298 4ann_A ESSB; membrane protein,  85.7     1.2 4.1E-05   40.7   5.9  116  239-391    42-158 (215)
299 4ano_A ESSB; membrane protein,  85.6       2 6.7E-05   39.4   7.3  114  240-391    48-163 (219)
300 2klu_A T-cell surface glycopro  85.2    0.56 1.9E-05   33.5   2.7   34   22-55     10-44  (70)
301 3cxl_A N-chimerin; SH2, RHO-GA  81.9    0.13 4.4E-06   53.3  -2.5   61  189-252   145-214 (463)
302 2k1k_A Ephrin type-A receptor   80.5     1.6 5.3E-05   28.0   3.2   26   19-44     11-36  (38)
303 1q90_G Cytochrome B6F complex   80.4     2.2 7.5E-05   26.6   3.6   28   24-51      5-33  (37)
304 3arc_J Photosystem II reaction  76.2       3  0.0001   26.4   3.4   24   19-44      7-30  (40)
305 2knc_B Integrin beta-3; transm  75.8     1.3 4.5E-05   33.4   2.1   30   16-45      9-38  (79)
306 2ks1_B Epidermal growth factor  74.7     3.9 0.00013   27.0   3.8   30   22-52     15-44  (44)
307 2l2t_A Receptor tyrosine-prote  74.6     3.9 0.00013   27.0   3.9   29   23-52     15-43  (44)
308 2l35_A DAP12-NKG2C_TM; immunor  73.4     3.3 0.00011   29.3   3.4   31   19-49      3-33  (63)
309 2llm_A Amyloid beta A4 protein  74.4    0.79 2.7E-05   29.8   0.0   27   23-49     17-43  (43)
310 1vf5_G Protein PET G; photosyn  69.8     2.5 8.6E-05   26.3   1.9   28   24-51      5-33  (37)
311 2lk9_A Bone marrow stromal ant  69.4     5.4 0.00018   24.3   3.2   24   22-45      5-28  (35)
312 2kv5_A FST, putative uncharact  67.7     6.6 0.00023   23.9   3.4   24   23-50      7-30  (33)
313 2l9u_A Receptor tyrosine-prote  66.3     6.6 0.00023   24.0   3.2   22   26-47     10-31  (40)
314 1zza_A Stannin, AG8_1; helix,   64.8     7.8 0.00027   28.1   3.9   28   17-46     11-38  (90)
315 3ls8_A Phosphatidylinositol 3-  59.5      81  0.0028   33.3  12.4   46  285-337   454-501 (614)
316 1cja_A Protein (actin-fragmin   59.3      51  0.0017   32.0  10.0  139  190-338    73-237 (342)
317 2nrg_A Intrinsic membrane prot  59.0      12  0.0004   27.9   4.1   25    1-26      1-25  (82)
318 2l6w_A Beta-type platelet-deri  63.5       2 6.8E-05   27.3   0.0   28   22-50      8-35  (39)
319 1afo_A Glycophorin A; integral  58.5      11 0.00037   23.9   3.2   13   24-36     11-23  (40)
320 2k9j_B Integrin beta-3; transm  55.4      11 0.00038   24.7   3.2   23   26-48     10-32  (43)
321 2ls4_A High affinity copper up  60.2     2.5 8.6E-05   24.5   0.0   15   20-34      1-15  (26)
322 2kog_A Vesicle-associated memb  52.7      11 0.00037   30.8   3.5    7   22-28     98-104 (119)
323 2k9y_A Ephrin type-A receptor   50.0      13 0.00044   23.8   2.8   27   26-52     13-40  (41)
324 2jwa_A Receptor tyrosine-prote  49.9      23  0.0008   23.2   4.0   27   24-51     17-43  (44)
325 2dw3_A Intrinsic membrane prot  48.9      18 0.00062   26.6   3.7   19    7-26      6-24  (77)
326 1s7q_A H-2KB, H-2 class I hist  45.5     4.4 0.00015   39.9   0.0   13   22-34    280-292 (348)
327 3hd7_A Vesicle-associated memb  43.3     9.7 0.00033   29.5   1.7   10   21-30     69-78  (91)
328 2lp1_A C99; alzheimer'S D memb  47.9     5.4 0.00019   31.9   0.0   29   19-47     26-54  (122)
329 3oja_A Leucine-rich immune mol  41.4     1.1 3.7E-05   46.5  -5.4   31  225-255   322-352 (487)
330 3hd7_A Vesicle-associated memb  39.6      20  0.0007   27.6   3.0   19   27-45     71-89  (91)
331 2k9p_A Pheromone alpha factor   38.4      34  0.0012   25.6   4.0   29   20-50     19-47  (80)
332 2l16_A SEC-independent protein  38.4      11 0.00037   28.3   1.2   19   17-35      2-20  (78)
333 1pfi_A Major coat protein of P  36.3      46  0.0016   21.3   3.6   27   20-46     17-43  (46)
334 2jp3_A FXYD domain-containing   34.8      26  0.0009   25.1   2.6   21   18-38     12-32  (67)
335 2kog_A Vesicle-associated memb  33.1      41  0.0014   27.3   4.0   15   24-38     97-111 (119)
336 3hhm_A Phosphatidylinositol-4,  29.2      76  0.0026   35.9   6.5   60  268-337   899-961 (1091)
337 2x6h_A GH13170P, VPS34, phosph  29.0      26 0.00091   37.7   2.7   45  286-337   529-575 (696)
338 2rdd_B UPF0092 membrane protei  28.5      23  0.0008   22.2   1.4    7   42-48     16-22  (37)
339 2zxe_G FXYD10, phospholemman-l  25.0      55  0.0019   23.9   2.9   20   19-38     15-34  (74)
340 2jo1_A Phospholemman; FXYD1, N  23.4      60  0.0021   23.4   2.8   17   21-37     14-30  (72)
341 3arc_X Photosystem II PSBX pro  22.9 1.1E+02  0.0038   19.4   3.6   12   26-37     11-22  (39)
342 1spf_A Pulmonary surfactant-as  20.6 1.4E+02  0.0049   17.9   3.6   11   18-28      8-18  (35)
343 3bz1_X Photosystem II PSBX pro  20.4 1.4E+02  0.0049   19.9   4.0   12   26-37     21-32  (50)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=5.4e-57  Score=448.74  Aligned_cols=261  Identities=25%  Similarity=0.471  Sum_probs=214.8

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      +..++|.+.+.||+|+||+||+|++.      ++..||||++........++|.+|+++|++++|||||+++|+|.+++.
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            45568899999999999999999864      367899999987777777889999999999999999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC
Q 009979          257 RMLVYEYIDNGNLEQWLHGDV---------GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN  327 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~  327 (521)
                      .|||||||++|+|.++|+...         .....+++..++.|+.|++.||+|||++   +|+||||||+||||+++++
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence            999999999999999997642         2346799999999999999999999998   9999999999999999999


Q ss_pred             ceEeecccceecCCCCccee-ecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHH
Q 009979          328 PKLSDFGLAKLLGAERSYVT-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       328 vkL~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~  405 (521)
                      +||+|||+|+.......... ....||+.|||||++.+..|+.++|||||||+||||+| |+.||....      ..+.+
T Consensus       167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~  240 (299)
T 4asz_A          167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVI  240 (299)
T ss_dssp             EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHH
T ss_pred             EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHH
Confidence            99999999987654433322 34579999999999999999999999999999999999 899996432      22333


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ........ .     .. +..++..+   .+|+.+||+.||++|||+.+|++.|+..
T Consensus       241 ~~i~~~~~-~-----~~-p~~~~~~~---~~li~~cl~~dP~~RPs~~~i~~~L~~~  287 (299)
T 4asz_A          241 ECITQGRV-L-----QR-PRTCPQEV---YELMLGCWQREPHMRKNIKGIHTLLQNL  287 (299)
T ss_dssp             HHHHHTCC-C-----CC-CTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHcCCC-C-----CC-CccchHHH---HHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            33322211 0     11 12244444   4588899999999999999999999753


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=3.1e-56  Score=449.23  Aligned_cols=261  Identities=26%  Similarity=0.459  Sum_probs=208.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      +..++|.+.++||+|+||+||+|++.      +++.||||++........++|.+|+++|++++|||||+++|+|.++..
T Consensus        38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~  117 (329)
T 4aoj_A           38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP  117 (329)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            34567888999999999999999864      467899999987777777889999999999999999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVG-----------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ  325 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~  325 (521)
                      .|||||||++|+|.++|+....           ...++++..++.|+.|++.||+|||+.   +||||||||+||||+++
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~  194 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG  194 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence            9999999999999999986532           235799999999999999999999998   99999999999999999


Q ss_pred             CCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHH
Q 009979          326 WNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVE  403 (521)
Q Consensus       326 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~  403 (521)
                      +++||+|||+++........ ..+..+||+.|||||++.+..|+.++|||||||+||||+| |+.||....      ..+
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~------~~~  268 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS------NTE  268 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC------HHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC------HHH
Confidence            99999999999976443322 2345689999999999999999999999999999999999 899996432      223


Q ss_pred             HHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          404 WLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       404 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .+........      +.. +..++..+   .+|+.+||+.||++||||.||+++|+..
T Consensus       269 ~~~~i~~g~~------~~~-p~~~~~~~---~~li~~cl~~dP~~RPs~~ei~~~L~~l  317 (329)
T 4aoj_A          269 AIDCITQGRE------LER-PRACPPEV---YAIMRGCWQREPQQRHSIKDVHARLQAL  317 (329)
T ss_dssp             HHHHHHHTCC------CCC-CTTCCHHH---HHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCC------CCC-cccccHHH---HHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence            3333322211      111 12244444   4588899999999999999999999863


No 3  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.4e-56  Score=444.58  Aligned_cols=264  Identities=28%  Similarity=0.469  Sum_probs=208.8

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      |++..++|.+.++||+|+||+||+|+++  ..||||+++..  .....+.|.+|+++|++++|||||+++|+|.+ +..+
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~  107 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA  107 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence            4778889999999999999999999874  35999998643  33445789999999999999999999999865 5689


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      ||||||++|+|.++|+..   ...+++..++.|+.|+|.||+|||++   +||||||||+||||++++++||+|||+|+.
T Consensus       108 iVmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  181 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             EEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred             EEEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCcee
Confidence            999999999999999865   35799999999999999999999998   999999999999999999999999999987


Q ss_pred             cCCCC-cceeecccccccccccccccC---CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          339 LGAER-SYVTTRVMGTFGYVAPEYAST---GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       339 ~~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ..... ....+..+||+.|||||++.+   +.|+.++|||||||+||||+||+.||.....      ...+...+...  
T Consensus       182 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~------~~~~~~~~~~~--  253 (307)
T 3omv_A          182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN------RDQIIFMVGRG--  253 (307)
T ss_dssp             ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC------HHHHHHHHHTT--
T ss_pred             cccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcC--
Confidence            64322 223456789999999999853   4689999999999999999999999964432      12222222221  


Q ss_pred             ccCCCcccC--CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCc
Q 009979          415 EGVLDPRLQ--EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFPF  466 (521)
Q Consensus       415 ~~~~d~~l~--~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~  466 (521)
                        ...|.+.  ...++..+.   +|+.+||+.||++||||.||++.|+....++
T Consensus       254 --~~~p~~~~~~~~~~~~l~---~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          254 --YASPDLSKLYKNCPKAMK---RLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             --CCCCCSTTSCTTSCHHHH---HHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             --CCCCCcccccccchHHHH---HHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence              1222221  122444444   4888999999999999999999998654443


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=3.9e-56  Score=444.40  Aligned_cols=261  Identities=26%  Similarity=0.415  Sum_probs=211.9

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      +....+++.++||+|+||+||+|.+.      +++.||||++.... ....++|.+|+.+|++++|||||+++|+|.++.
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~  102 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ  102 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence            34456778899999999999999863      46789999996543 334578999999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVG------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD  323 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~  323 (521)
                      ..+||||||++|+|.++|+....            ....+++..++.|+.|||.||+|||++   +||||||||+||||+
T Consensus       103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY  179 (308)
T ss_dssp             SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence            99999999999999999975421            134689999999999999999999998   999999999999999


Q ss_pred             CCCCceEeecccceecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccH
Q 009979          324 KQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNL  401 (521)
Q Consensus       324 ~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~  401 (521)
                      +++++||+|||+++....... ...+...||+.|||||++.++.|+.++|||||||+||||+| |+.||....      .
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~------~  253 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------N  253 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC------H
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC------H
Confidence            999999999999987644332 23445689999999999999999999999999999999999 899996443      2


Q ss_pred             HHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          402 VEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       402 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .+.+... ..+...    +  .+..++..   +.+|+.+||+.||++||||.||++.|++.
T Consensus       254 ~~~~~~i-~~~~~~----~--~p~~~~~~---~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          254 QDVVEMI-RNRQVL----P--CPDDCPAW---VYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHH-HTTCCC----C--CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHH-HcCCCC----C--CcccchHH---HHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            2222222 222111    1  11224444   44588899999999999999999999864


No 5  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2e-55  Score=443.56  Aligned_cols=249  Identities=26%  Similarity=0.355  Sum_probs=208.6

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      +.|++.++||+|+||+||+|++. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            46899999999999999999976 68999999997665555677889999999999999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCc
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS  344 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~  344 (521)
                      +||+|.+++...     .+++..+..++.||+.||+|||++   +|+||||||+||||+.++++||+|||+|+.+.... 
T Consensus       154 ~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-  224 (346)
T 4fih_A          154 EGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-  224 (346)
T ss_dssp             TTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-
T ss_pred             CCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-
Confidence            999999999753     589999999999999999999999   99999999999999999999999999999875433 


Q ss_pred             ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCC
Q 009979          345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE  424 (521)
Q Consensus       345 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~  424 (521)
                      ...+..+||+.|||||++.+..|+.++|||||||++|||++|+.||....      ..+.+......      ..+.+..
T Consensus       225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~------~~~~~~~  292 (346)
T 4fih_A          225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN------LPPRLKN  292 (346)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS------SCCCCSC
T ss_pred             CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC------CCCCCCc
Confidence            23456789999999999999999999999999999999999999996432      22222222221      1111111


Q ss_pred             CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          425 KPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       425 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                        ......++.+|+.+||+.||++|||+.|+++
T Consensus       293 --~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          293 --LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              1112234455888999999999999999874


No 6  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=1.3e-55  Score=445.53  Aligned_cols=252  Identities=21%  Similarity=0.363  Sum_probs=203.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||+||+|++. +|+.||||++....  ....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            368999999999999999999975 68999999997543  334567899999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      |||+||+|.++|....  ...+++..++.|+.||+.||+|||++   +|+||||||+||||+.++++||+|||+|+.+..
T Consensus       103 Ey~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             ECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             eCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            9999999999997652  35688999999999999999999999   999999999999999999999999999997643


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      . ....+..+||+.|||||++.+..|+.++|||||||+||||+||+.||...      +..+.+........     . .
T Consensus       178 ~-~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~------~~~~~~~~i~~~~~-----~-~  244 (350)
T 4b9d_A          178 T-VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG------SMKNLVLKIISGSF-----P-P  244 (350)
T ss_dssp             H-HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHTCC-----C-C
T ss_pred             C-cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc------CHHHHHHHHHcCCC-----C-C
Confidence            2 22234578999999999999999999999999999999999999999643      23333333333211     1 1


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      +.. ..+..   +.+|+.+||+.||++|||+.|++++
T Consensus       245 ~~~-~~s~~---~~~li~~~L~~dP~~R~s~~e~l~h  277 (350)
T 4b9d_A          245 VSL-HYSYD---LRSLVSQLFKRNPRDRPSVNSILEK  277 (350)
T ss_dssp             CCT-TSCHH---HHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCc-cCCHH---HHHHHHHHccCChhHCcCHHHHhcC
Confidence            111 13333   4458889999999999999999863


No 7  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=4.5e-55  Score=434.71  Aligned_cols=248  Identities=22%  Similarity=0.306  Sum_probs=208.1

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ++|++.+.||+|+||+||+|++. +++.||||++.+..   ....+.+.+|+++|+.++|||||++++++.+++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            47999999999999999999975 68899999996542   234567899999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      |||+||+|.+++.+.    ..+++..+..++.|++.||+|||++   +|+||||||+||||+.++++||+|||+|+.+..
T Consensus       112 Ey~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~  184 (311)
T 4aw0_A          112 SYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  184 (311)
T ss_dssp             CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence            999999999999865    5799999999999999999999999   999999999999999999999999999998754


Q ss_pred             CC-cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          342 ER-SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       342 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      .. .......+||+.|||||++.+..|+.++|||||||+||||+||+.||...+      ..+.+.......       .
T Consensus       185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~~-------~  251 (311)
T 4aw0_A          185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKIIKLE-------Y  251 (311)
T ss_dssp             TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTC-------C
T ss_pred             CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCC-------C
Confidence            33 233456799999999999999999999999999999999999999996432      223333333221       1


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .+... .+.   ++.+|+.+||+.||++|||+.|++.
T Consensus       252 ~~p~~-~s~---~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          252 DFPEK-FFP---KARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             CCCTT-CCH---HHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             CCCcc-cCH---HHHHHHHHHccCCHhHCcChHHHcC
Confidence            12221 223   3455888999999999999998743


No 8  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=5.2e-54  Score=443.66  Aligned_cols=249  Identities=27%  Similarity=0.361  Sum_probs=209.6

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      .+.|++.++||+|+||.||+|++. +|+.||||++........+.+.+|+++|+.++|||||+++++|.+++.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            357999999999999999999976 5899999999766666667789999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      |+||+|.++++..     .+++..+..++.||+.||+|||++   +||||||||+||||+.+|++||+|||+|+.+....
T Consensus       230 ~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          230 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            9999999999754     589999999999999999999999   99999999999999999999999999999875433


Q ss_pred             cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccC
Q 009979          344 SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ  423 (521)
Q Consensus       344 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  423 (521)
                       ...+..+||+.|||||++.+..|+.++|||||||++|||++|+.||....      ..+.+......      ..+.+.
T Consensus       302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~------~~~~~~  368 (423)
T 4fie_A          302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN------LPPRLK  368 (423)
T ss_dssp             -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS------CCCCCS
T ss_pred             -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC------CCCCCc
Confidence             23456789999999999999999999999999999999999999996432      22222222221      111111


Q ss_pred             C-CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          424 E-KPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       424 ~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      . ...+..   +.+|+.+||+.||++|||+.|+++
T Consensus       369 ~~~~~s~~---~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          369 NLHKVSPS---LKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CTTSSCHH---HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCHH---HHHHHHHHcCCChhHCcCHHHHhc
Confidence            1 112333   445888999999999999999974


No 9  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=2.6e-54  Score=434.18  Aligned_cols=251  Identities=19%  Similarity=0.228  Sum_probs=202.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      .+.|++.++||+|+||+||+|++. +|+.||||++.....     ..+|+.+|+.++|||||++++++.++..+||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            456888999999999999999975 588999999965432     24599999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC-CceEeecccceecCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW-NPKLSDFGLAKLLGAE  342 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~-~vkL~DFGla~~~~~~  342 (521)
                      |+||+|.++|+..    ..+++..+..++.|++.||+|||++   +||||||||+||||+.++ ++||+|||+|+.+...
T Consensus       132 ~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          132 LEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            9999999999865    5799999999999999999999998   999999999999999887 6999999999987543


Q ss_pred             Ccc----eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          343 RSY----VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       343 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ...    .....+||+.|||||++.+..|+.++|||||||+||||+||+.||........   ..   .........   
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~i~~~~~~~---  275 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CL---KIASEPPPI---  275 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HH---HHHHSCCGG---
T ss_pred             CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---HHHcCCCCc---
Confidence            221    12346899999999999999999999999999999999999999976543321   11   111111000   


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                       ..+. ..++..+   .+++.+||+.||++|||+.|+++.|..
T Consensus       276 -~~~~-~~~s~~~---~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          276 -REIP-PSCAPLT---AQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             -GGSC-TTSCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             -hhcC-ccCCHHH---HHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence             0111 1233444   447889999999999999999988754


No 10 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=2.1e-54  Score=439.46  Aligned_cols=268  Identities=25%  Similarity=0.382  Sum_probs=217.1

Q ss_pred             cchhhhhhcCCCccccceEccCCcEEEEEEEEcC------CcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCC-CCeeeE
Q 009979          176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRH-KNLVRL  247 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h-pniv~l  247 (521)
                      |...+|+++.++|++.+.||+|+||+||+|.+..      ++.||||.+..... ...+.|.+|+++|.+++| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            3456788999999999999999999999998653      24699999976543 345679999999999965 999999


Q ss_pred             EEEEeeC-CeeeEEEEeccCCchHHhhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 009979          248 LGYCAEG-AHRMLVYEYIDNGNLEQWLHGDVG------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRD  314 (521)
Q Consensus       248 ~~~~~~~-~~~~lV~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrD  314 (521)
                      +|+|.+. ..++||||||++|+|.++|+....            ....+++..++.++.|||.||+|||++   +|||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence            9999764 568999999999999999976421            135689999999999999999999999   999999


Q ss_pred             CCCCCeEeCCCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCC
Q 009979          315 IKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDY  392 (521)
Q Consensus       315 ik~~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~  392 (521)
                      |||+|||+++++++||+|||+|+.+...... ..+..+||+.|||||++.+..|+.++|||||||+||||+| |+.||..
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999977544333 3345789999999999999999999999999999999998 9999975


Q ss_pred             CCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          393 SRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      ....      +.+...+..+..     +... ..++..   +.+++.+||+.||++|||+.||+++|+.
T Consensus       291 ~~~~------~~~~~~i~~g~~-----~~~p-~~~~~~---~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          291 VKID------EEFCRRLKEGTR-----MRAP-DYTTPE---MYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             CCCS------HHHHHHHHHTCC-----CCCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHH------HHHHHHHHcCCC-----CCCC-ccCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            4322      122222222211     1111 224444   4458889999999999999999999875


No 11 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=8e-54  Score=423.27  Aligned_cols=246  Identities=24%  Similarity=0.403  Sum_probs=196.7

Q ss_pred             cccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee----CCeeeEEE
Q 009979          189 ADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE----GAHRMLVY  261 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~----~~~~~lV~  261 (521)
                      ++.++||+|+||+||+|.+. ++..||+|++...  .....+.|.+|+++|++++|||||+++++|.+    +..+||||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            66788999999999999976 5888999999654  23345679999999999999999999999865    34679999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-CCCCceEeecccceecC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-~~~~vkL~DFGla~~~~  340 (521)
                      |||+||+|.+++++.    ..+++..+..++.|++.||+|||++ .++|+||||||+||||+ .++.+||+|||+|+...
T Consensus       109 Ey~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence            999999999999865    5799999999999999999999998 12399999999999997 47999999999998643


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      .   ......+||+.|||||++.+ .|+.++|||||||+||||+||+.||....     +.....+... ...    ..+
T Consensus       184 ~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-----~~~~~~~~i~-~~~----~~~  249 (290)
T 3fpq_A          184 A---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVT-SGV----KPA  249 (290)
T ss_dssp             T---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHT-TTC----CCG
T ss_pred             C---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----cHHHHHHHHH-cCC----CCC
Confidence            2   23456789999999998865 69999999999999999999999996432     2222222222 111    111


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .+.. ..+.   ++.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~-~~~~---~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          250 SFDK-VAIP---EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GGGG-CCCH---HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCc-cCCH---HHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111 1223   3445888999999999999999985


No 12 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=5e-54  Score=429.33  Aligned_cols=263  Identities=24%  Similarity=0.348  Sum_probs=201.8

Q ss_pred             CccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC----eeeEEEE
Q 009979          187 GFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA----HRMLVYE  262 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~----~~~lV~e  262 (521)
                      +|.+.++||+|+||+||+|++ +|+.||||++..... ....+..|+..+.+++|||||+++|+|.++.    .+|||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            578889999999999999998 588999999864322 2223345666677899999999999998654    5799999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG-----LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-----~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ||++|+|.++|+..     .+++..+++++.|++.||+|||++     ..++|+||||||+||||+.++++||+|||+|+
T Consensus        82 y~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           82 YHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             CCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            99999999999864     689999999999999999999975     24589999999999999999999999999999


Q ss_pred             ecCCCCcce---eecccccccccccccccCC------CCCCcccchhHHHHHHHHHhCCCCCCCCCCC---------Ccc
Q 009979          338 LLGAERSYV---TTRVMGTFGYVAPEYASTG------MLNERSDVYSFGILIMEVISGRNPVDYSRPP---------GEV  399 (521)
Q Consensus       338 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~---------~~~  399 (521)
                      .........   ....+||+.|||||++.+.      .++.++|||||||+||||+||..||......         ...
T Consensus       157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~  236 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence            875443222   2346899999999998764      4678999999999999999998877543221         111


Q ss_pred             cHHHHHHHHhhccccccCCCcccCCC-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          400 NLVEWLKTMVTNRNAEGVLDPRLQEK-PCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      .. +.+...+..    ..++|.+... ........+.+|+.+||+.||++||||.||++.|+.
T Consensus       237 ~~-~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  294 (303)
T 3hmm_A          237 SV-EEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  294 (303)
T ss_dssp             CH-HHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred             hH-HHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence            22 223333322    2233333322 123455566779999999999999999999999975


No 13 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.7e-53  Score=417.40  Aligned_cols=246  Identities=22%  Similarity=0.352  Sum_probs=190.8

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ++|++.+.||+|+||+||+|.+. +++.||||++.+..   ....+.+.+|+++|+.++|||||++++++.+++..||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            47999999999999999999964 68999999996542   233467899999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||| +|+|.+++.+.    ..+++..+..++.|++.||+|||++   +|+||||||+|||+++++++||+|||+|+....
T Consensus        93 Ey~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             ECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             eCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            999 67999999865    5799999999999999999999999   999999999999999999999999999987643


Q ss_pred             CCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      .  ......+||+.|||||++.+..| +.++|||||||++|||+||+.||...      +..+.++..... ..      
T Consensus       165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~------~~~~~~~~i~~~-~~------  229 (275)
T 3hyh_A          165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE------SIPVLFKNISNG-VY------  229 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHT-CC------
T ss_pred             C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcC-CC------
Confidence            2  23345789999999999988876 57999999999999999999999643      222333332221 11      


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .+.. ..+..   +.+++.+||+.||++|||+.|++++
T Consensus       230 ~~p~-~~s~~---~~~li~~~L~~dP~~R~s~~eil~h  263 (275)
T 3hyh_A          230 TLPK-FLSPG---AAGLIKRMLIVNPLNRISIHEIMQD  263 (275)
T ss_dssp             CCCT-TSCHH---HHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred             CCCC-CCCHH---HHHHHHHHccCChhHCcCHHHHHcC
Confidence            1111 12333   4458889999999999999999863


No 14 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=8.6e-54  Score=425.23  Aligned_cols=248  Identities=24%  Similarity=0.279  Sum_probs=197.0

Q ss_pred             CCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      .++|++.+.||+|+||+||+|+..    +++.||||++.+...  .....+.+|+++|++++|||||++++++.+++..|
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            357999999999999999999863    467899999865422  22346788999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      ||||||+||+|.+++.+.    ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++++||+|||+|+.
T Consensus       103 ivmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EEECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            999999999999999875    5799999999999999999999999   999999999999999999999999999986


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ..... ......+||+.|||||++.+..|+.++|||||||+||||+||+.||...+      ..+.+.......      
T Consensus       176 ~~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~~------  242 (304)
T 3ubd_A          176 SIDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILKAK------  242 (304)
T ss_dssp             ------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC------
T ss_pred             ccCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHcCC------
Confidence            53322 23345789999999999999999999999999999999999999996432      223333333211      


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM-----GHVIH  457 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~  457 (521)
                       ..+.. ..+..   +.+|+.+||+.||++|||+     +|+++
T Consensus       243 -~~~p~-~~s~~---~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          243 -LGMPQ-FLSPE---AQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             -CCCCT-TSCHH---HHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             -CCCCC-cCCHH---HHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence             11111 13333   4458889999999999984     66664


No 15 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=6.7e-52  Score=412.53  Aligned_cols=249  Identities=22%  Similarity=0.419  Sum_probs=189.0

Q ss_pred             CccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC---------
Q 009979          187 GFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA---------  255 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~---------  255 (521)
                      +|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+         
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            5888999999999999999975 68899999986543 334467899999999999999999999987544         


Q ss_pred             ---eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEee
Q 009979          256 ---HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD  332 (521)
Q Consensus       256 ---~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~D  332 (521)
                         .+|||||||++|+|.+++.... ......+..++.++.|++.||+|||++   +|+||||||+||||+.++++||+|
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence               3689999999999999998653 233456777899999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCcc-----------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccH
Q 009979          333 FGLAKLLGAERSY-----------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNL  401 (521)
Q Consensus       333 FGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~  401 (521)
                      ||+|+.+......           ..+..+||+.|||||++.+..|+.++|||||||++|||++   ||..     ..+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~-----~~~~  233 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST-----QMER  233 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS-----HHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC-----ccHH
Confidence            9999876543221           1234689999999999999999999999999999999996   7742     1122


Q ss_pred             HHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          402 VEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       402 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ...+..... ..    ..     .........+.+++.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~-~~----~p-----~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          234 VRTLTDVRN-LK----FP-----PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHT-TC----CC-----HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhc-CC----CC-----CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            222222111 10    11     112223334556889999999999999999986


No 16 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=2.9e-49  Score=398.03  Aligned_cols=284  Identities=40%  Similarity=0.713  Sum_probs=249.8

Q ss_pred             cchhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      +++.+++...++|++.+.||+|+||.||+|.+.++..||+|++........+.+.+|+++++.++||||+++++++.+..
T Consensus        29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  108 (321)
T 2qkw_B           29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN  108 (321)
T ss_dssp             -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred             ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence            34556667889999999999999999999998889999999988776666788999999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..++||||+++|+|.+++.........+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~  185 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI  185 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence            99999999999999999987654456799999999999999999999998   999999999999999999999999999


Q ss_pred             ceecCCCC-cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          336 AKLLGAER-SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       336 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ++...... ........||+.|+|||++.+..++.++|||||||++|||+||+.||....+....+..+|..........
T Consensus       186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  265 (321)
T 2qkw_B          186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL  265 (321)
T ss_dssp             CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred             ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence            98754322 22234456999999999999899999999999999999999999999988777777888887777777777


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...+++.+...........+.+++.+||+.||++|||+.++++.|+..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~  313 (321)
T 2qkw_B          266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA  313 (321)
T ss_dssp             CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            777887777666777888888899999999999999999999999753


No 17 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.1e-49  Score=401.82  Aligned_cols=295  Identities=41%  Similarity=0.765  Sum_probs=255.9

Q ss_pred             CCCCcccchhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCeeeEE
Q 009979          170 LGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQ-AEKEFKVEVEAIGRVRHKNLVRLL  248 (521)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~hpniv~l~  248 (521)
                      .+....|++.++.+..++|.+.+.||+|+||.||+|.+.+++.||||++...... ....+..|+++++.++||||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            3444567899999999999999999999999999999878999999998764322 234688999999999999999999


Q ss_pred             EEEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCc
Q 009979          249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP  328 (521)
Q Consensus       249 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~v  328 (521)
                      +++.+....++||||+++|+|.++++........+++..++.++.|++.||+|||+.+.++|+||||||+|||++.++.+
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence            99999999999999999999999998876556779999999999999999999999877789999999999999999999


Q ss_pred             eEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC--CCCCcccHHHHHH
Q 009979          329 KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS--RPPGEVNLVEWLK  406 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~--~~~~~~~~~~~~~  406 (521)
                      ||+|||+++..............||+.|+|||++.+..++.++|||||||++|||+||+.||...  .........+|+.
T Consensus       174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  253 (326)
T 3uim_A          174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK  253 (326)
T ss_dssp             EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred             EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence            99999999987655555556677999999999998889999999999999999999999999632  2234456667777


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                      ..........+.+..+...........+.+++.+||+.||.+|||+.+|+++|+....
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             TTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             HHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            7777777777888877777778888899999999999999999999999999987543


No 18 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.9e-49  Score=406.61  Aligned_cols=261  Identities=24%  Similarity=0.364  Sum_probs=200.8

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEee------CCe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE------GAH  256 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~------~~~  256 (521)
                      ++|++.+.||+|+||+||+|++. +|+.||||++.+..  ....+.+.+|+++|+.++|||||++++++..      ...
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            57999999999999999999975 68999999996543  2334678899999999999999999999764      357


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      +|||||||+ |+|.+++...    ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~----~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS----QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEeCCC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence            899999995 6899999765    5799999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCC---cceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          337 KLLGAER---SYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       337 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      +.+....   ....+..+||+.|+|||++.+. .++.++||||+||++|||++|+.||...+.   ......+.......
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~---~~~l~~I~~~~g~p  282 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY---VHQLQLIMMVLGTP  282 (398)
T ss_dssp             BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH---HHHHHHHHHHHCCC
T ss_pred             eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH---HHHHHHHHHhcCCC
Confidence            8764321   2234567899999999998765 579999999999999999999999964431   11222111111110


Q ss_pred             cccc--------------CCCcccCCCcc----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          413 NAEG--------------VLDPRLQEKPC----SRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       413 ~~~~--------------~~d~~l~~~~~----~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....              .+.+. ...+.    +....++.+|+.+||..||++|||+.|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          283 SPAVIQAVGAERVRAYIQSLPPR-QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             CGGGTC-----CHHHHHHSSCCC-CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             ChHHhhhhhhhhhhhhhhcCCCc-CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000              00000 00000    1112355678899999999999999998753


No 19 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.5e-48  Score=421.72  Aligned_cols=252  Identities=21%  Similarity=0.343  Sum_probs=210.4

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      ++|++.+.||+|+||+||+|.+. +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+...+|||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            58999999999999999999975 68999999998776666778899999999999999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC--CCCceEeecccceecCCC
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK--QWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~--~~~vkL~DFGla~~~~~~  342 (521)
                      +||+|.++|...   ...+++..+..++.||+.||+|||++   +|+||||||+|||++.  .+.+||+|||+|+.+...
T Consensus       237 ~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          237 SGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             CCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             CCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            999999999754   35799999999999999999999999   9999999999999975  489999999999987543


Q ss_pred             CcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCccc
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL  422 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  422 (521)
                      .  .....+||+.|||||++.+..|+.++|||||||+||||++|+.||....      ..+.+.......       ..+
T Consensus       311 ~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~------~~~~~~~i~~~~-------~~~  375 (573)
T 3uto_A          311 Q--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCD-------WNM  375 (573)
T ss_dssp             S--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTC-------CCC
T ss_pred             C--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHhCC-------CCC
Confidence            3  3345689999999999999999999999999999999999999996432      223233322211       011


Q ss_pred             CCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          423 QEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       423 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ...........+.+|+.+||+.||.+|||+.|++++
T Consensus       376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111111222345568889999999999999999874


No 20 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.4e-48  Score=398.75  Aligned_cols=197  Identities=25%  Similarity=0.402  Sum_probs=169.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~l  259 (521)
                      .++|++.++||+|+||+||+|+.+    .++.||+|++....  ....+.+|+++|+.+ +|||||++++++.+.++.||
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            468999999999999999999863    36789999986543  345678899999998 69999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC-CCceEeeccccee
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ-WNPKLSDFGLAKL  338 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~-~~vkL~DFGla~~  338 (521)
                      |||||++|+|.++++       .+++..+..++.|++.||+|||++   +|+||||||+|||++.+ +++||+|||+|+.
T Consensus        98 vmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           98 AMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             EEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            999999999999983       478999999999999999999999   99999999999999876 7999999999986


Q ss_pred             cCCCCc---------------------------ceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCC
Q 009979          339 LGAERS---------------------------YVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPV  390 (521)
Q Consensus       339 ~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf  390 (521)
                      ......                           ...+..+||+.|+|||++.+. .|+.++||||+||++|||+||+.||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence            543211                           112345799999999998775 5899999999999999999999999


Q ss_pred             CCC
Q 009979          391 DYS  393 (521)
Q Consensus       391 ~~~  393 (521)
                      ...
T Consensus       248 ~~~  250 (361)
T 4f9c_A          248 YKA  250 (361)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            643


No 21 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=6.3e-48  Score=415.81  Aligned_cols=254  Identities=22%  Similarity=0.281  Sum_probs=203.7

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhH---HHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAE---KEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~---~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      +..++|++.++||+|+||+||+|+.. +|+.||||++.+...   ...   .....++.+++.++|||||+++++|.+..
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC
Confidence            34578999999999999999999976 588999999964321   112   22334577788889999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      .+|||||||+||+|.++|.+.    ..+++..+..++.||+.||+|||++   +||||||||+||||+.+|++||+|||+
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccce
Confidence            999999999999999999865    5799999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      |+.+....   ....+||+.|||||++.. ..|+.++|||||||+||||++|+.||.......   ..+..+......  
T Consensus       339 A~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---~~~i~~~i~~~~--  410 (689)
T 3v5w_A          339 ACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEIDRMTLTMA--  410 (689)
T ss_dssp             CEECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---HHHHHHHHHHCC--
T ss_pred             eeecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHhhcCCC--
Confidence            99865432   345789999999999964 579999999999999999999999997544332   222222222211  


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPK-----MGHVIHMLE  460 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~  460 (521)
                           ..+... .+.   ++.+|+.+||+.||.+|++     +.||+++--
T Consensus       411 -----~~~p~~-~S~---~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hpf  452 (689)
T 3v5w_A          411 -----VELPDS-FSP---ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPF  452 (689)
T ss_dssp             -----CCCCTT-SCH---HHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGG
T ss_pred             -----CCCCcc-CCH---HHHHHHHHHccCCHhHCCCCCCCCHHHHhcCcc
Confidence                 111111 233   3445888999999999998     788875443


No 22 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=7.6e-46  Score=371.13  Aligned_cols=256  Identities=26%  Similarity=0.467  Sum_probs=211.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ..++|.+.+.||+|+||+||+|.+. ++..||+|++........+.+.+|+++++.++||||+++++++.++...++|||
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            4568899999999999999999975 588899999977777777889999999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++|+|.++++..   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        88 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           88 YIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             CCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             ecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            99999999999875   35789999999999999999999999   9999999999999999999999999999876433


Q ss_pred             Ccce-------------eecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCc---ccHHHHHH
Q 009979          343 RSYV-------------TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGE---VNLVEWLK  406 (521)
Q Consensus       343 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~---~~~~~~~~  406 (521)
                      ....             .....||+.|+|||++.+..++.++|||||||++|||++|..||....+...   ........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD  241 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence            2211             1145799999999999999999999999999999999999999875433221   11111111


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ..         ..     ..++..   +.+++.+||+.||++|||+.++++.|+..
T Consensus       242 ~~---------~~-----~~~~~~---l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          242 RY---------CP-----PNCPPS---FFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             HT---------CC-----TTCCTT---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cc---------CC-----CCCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            10         01     112222   44588899999999999999999999864


No 23 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=2.3e-45  Score=365.89  Aligned_cols=251  Identities=24%  Similarity=0.377  Sum_probs=207.8

Q ss_pred             CCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          185 TNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      .++|++.+.||+|+||+||+|.+ .+++.||+|++........+.+.+|+.+++.++||||+++++++..+...++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            45899999999999999999995 46889999999766656667889999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      +++|+|.+++...     .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.......
T Consensus        99 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            9999999999764     588999999999999999999999   99999999999999999999999999998765433


Q ss_pred             cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccC
Q 009979          344 SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ  423 (521)
Q Consensus       344 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  423 (521)
                      . ......||+.|+|||++.+..++.++|||||||++|||++|+.||....+      ............. ....    
T Consensus       171 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~-~~~~----  238 (297)
T 3fxz_A          171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP------LRALYLIATNGTP-ELQN----  238 (297)
T ss_dssp             C-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHHCSC-CCSC----
T ss_pred             c-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCC-CCCC----
Confidence            2 23456799999999999999999999999999999999999999964321      2222222221111 1100    


Q ss_pred             CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          424 EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       424 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....+.   .+.+++.+||+.||++|||+.|++++
T Consensus       239 ~~~~~~---~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          239 PEKLSA---IFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             GGGSCH---HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCH---HHHHHHHHHccCChhHCcCHHHHhhC
Confidence            111233   34558889999999999999999753


No 24 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=3.9e-45  Score=366.37  Aligned_cols=264  Identities=27%  Similarity=0.466  Sum_probs=203.4

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      ...+++..++|++.+.||+|+||+||+|.+ +++.||||++....  ....+.+.+|++++++++||||+++++++.+..
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            444566778999999999999999999987 58889999987653  334467889999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEeCCCCCceEeec
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK--VVHRDIKSSNILLDKQWNPKLSDF  333 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~--iiHrDik~~NILl~~~~~vkL~DF  333 (521)
                      ..++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.+||+||
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df  183 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF  183 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred             ceEEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence            9999999999999999998642 112489999999999999999999998   8  999999999999999999999999


Q ss_pred             ccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      |+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....      .+..........
T Consensus       184 g~a~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~------~~~~~~~~~~~~  256 (309)
T 3p86_A          184 GLSRLKAST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP------AQVVAAVGFKCK  256 (309)
T ss_dssp             C------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHHHSCC
T ss_pred             CCCcccccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhcCC
Confidence            999865332 2223456799999999999999999999999999999999999999964422      222222211111


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                           ...+.. ..+..   +.+++.+||+.||.+|||+.++++.|+..
T Consensus       257 -----~~~~~~-~~~~~---l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          257 -----RLEIPR-NLNPQ---VAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             -----CCCCCT-TSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCCCCc-cCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 011111 12333   44588899999999999999999999764


No 25 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=4e-45  Score=357.86  Aligned_cols=259  Identities=25%  Similarity=0.408  Sum_probs=214.8

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ++..++|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|+++++.++||||+++++++.+....++||
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT   82 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             EechhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence            556778999999999999999999998888899999875433 3467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        83 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  156 (268)
T 3sxs_A           83 EYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD  156 (268)
T ss_dssp             ECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred             EccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence            999999999999765   34689999999999999999999999   999999999999999999999999999998755


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ..........||+.|+|||.+.+..++.++||||||+++|||+| |+.||.....      .+.........   .... 
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~---~~~~-  226 (268)
T 3sxs_A          157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN------SEVVLKVSQGH---RLYR-  226 (268)
T ss_dssp             TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTC---CCCC-
T ss_pred             hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh------HHHHHHHHcCC---CCCC-
Confidence            54444444567788999999998899999999999999999999 9999964331      12222222111   1111 


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                         ....+..   +.+++.+||+.||++|||+.++++.|+...
T Consensus       227 ---~~~~~~~---l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          227 ---PHLASDT---IYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             ---CTTSCHH---HHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             ---CCcChHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence               1112333   445888999999999999999999998764


No 26 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-45  Score=374.75  Aligned_cols=252  Identities=24%  Similarity=0.391  Sum_probs=198.5

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      ...++|++.+.||+|+||+||+|.+. +++.||||++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus         7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv   86 (347)
T 3zgw_A            7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV   86 (347)
T ss_dssp             TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence            34578999999999999999999964 68899999986643 23346788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||++....
T Consensus        87 ~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~  159 (347)
T 3zgw_A           87 LEYCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK  159 (347)
T ss_dssp             EECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred             EeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence            9999999999999765    4689999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ..........+||+.|+|||++.+..+ +.++|||||||++|||++|..||...      +..+..........      
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~------~~~~~~~~i~~~~~------  227 (347)
T 3zgw_A          160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD------NVMALYKKIMRGKY------  227 (347)
T ss_dssp             ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHTCC------
T ss_pred             CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHcCCC------
Confidence            444444556789999999999988775 89999999999999999999999643      22333333332210      


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .+.. ..+.   .+.+++.+||+.||++|||+.|++++
T Consensus       228 -~~p~-~~s~---~~~~li~~~L~~dP~~Rps~~eil~h  261 (347)
T 3zgw_A          228 -DVPK-WLSP---SSILLLQQMLQVDPKKRISMKNLLNH  261 (347)
T ss_dssp             -CCCT-TCCH---HHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             -CCCC-CCCH---HHHHHHHHHcccCHhHCcCHHHHhcC
Confidence             1111 1223   34458889999999999999999864


No 27 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.4e-45  Score=361.52  Aligned_cols=258  Identities=26%  Similarity=0.447  Sum_probs=213.2

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .+..++|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|++++++++||||+++++++.+....++||
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (269)
T 4hcu_A            6 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   84 (269)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             EeChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence            455678999999999999999999998888999999876433 3467899999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  158 (269)
T 4hcu_A           85 EFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  158 (269)
T ss_dssp             ECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             EeCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence            999999999999765   35789999999999999999999999   999999999999999999999999999987654


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ..........||+.|+|||.+.+..++.++||||||+++|||++ |+.||....      ..+.........   ...  
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~------~~~~~~~~~~~~---~~~--  227 (269)
T 4hcu_A          159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF---RLY--  227 (269)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC---CCC--
T ss_pred             cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhcCc---cCC--
Confidence            43333344567889999999998999999999999999999999 999996432      222222222211   111  


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        .....+..   +.+++.+||+.||++||++.+++++|+..
T Consensus       228 --~~~~~~~~---~~~li~~~l~~~p~~Rps~~~ll~~l~~l  264 (269)
T 4hcu_A          228 --KPRLASTH---VYQIMNHCWRERPEDRPAFSRLLRQLAEI  264 (269)
T ss_dssp             --CCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCcCCHH---HHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence              11112333   44588899999999999999999999753


No 28 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.4e-45  Score=377.21  Aligned_cols=262  Identities=25%  Similarity=0.439  Sum_probs=211.3

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc--------CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcC-CCCCeeeEEEEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE--------DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRV-RHKNLVRLLGYC  251 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~hpniv~l~~~~  251 (521)
                      ++..++|.+.+.||+|+||.||+|.+.        ++..||||.+..... ...+.+.+|+++|+.+ +||||++++++|
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            445678999999999999999999863        345699999876533 3456789999999999 899999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVG------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSN  319 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~N  319 (521)
                      .+....|+||||+++|+|.+++.....            ....+++..++.++.|++.||+|||++   +|+||||||+|
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N  233 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN  233 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence            999999999999999999999986532            124689999999999999999999999   99999999999


Q ss_pred             eEeCCCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCC
Q 009979          320 ILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG  397 (521)
Q Consensus       320 ILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~  397 (521)
                      ||++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||...... 
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-  312 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-  312 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred             EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence            99999999999999999976543322 2234567899999999999999999999999999999999 99999754321 


Q ss_pred             cccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        ....   . +.....     +.. ...++..   +.+++.+||+.||++||++.|+++.|+..
T Consensus       313 --~~~~---~-~~~~~~-----~~~-~~~~~~~---l~~li~~~l~~dP~~Rpt~~ell~~L~~i  362 (370)
T 2psq_A          313 --ELFK---L-LKEGHR-----MDK-PANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRI  362 (370)
T ss_dssp             --GHHH---H-HHTTCC-----CCC-CTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --HHHH---H-HhcCCC-----CCC-CCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence              2221   1 111110     111 1123333   44588899999999999999999999863


No 29 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=2.2e-45  Score=362.55  Aligned_cols=259  Identities=22%  Similarity=0.375  Sum_probs=210.5

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      +++..++|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|+++++.++||||+++++++.+....++|
T Consensus        19 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             TBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             ccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence            3567789999999999999999999998888999999875433 346788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        98 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           98 TEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             ECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             EeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            9999999999999764   34689999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...........||+.|+|||++.+..++.++||||||+++|||+| |+.||.....      .+.........      .
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~------~~~~~~~~~~~------~  239 (283)
T 3gen_A          172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------SETAEHIAQGL------R  239 (283)
T ss_dssp             CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHHHHHHHTTC------C
T ss_pred             ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh------hHHHHHHhccc------C
Confidence            433333334557889999999998899999999999999999998 9999964331      22222222111      0


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .. .....+.   .+.+++.+||+.||.+|||+.++++.|+..
T Consensus       240 ~~-~~~~~~~---~l~~li~~~l~~~p~~Rps~~~ll~~L~~~  278 (283)
T 3gen_A          240 LY-RPHLASE---KVYTIMYSCWHEKADERPTFKILLSNILDV  278 (283)
T ss_dssp             CC-CCTTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-CCCcCCH---HHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            11 1111233   344588899999999999999999999753


No 30 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=4.4e-45  Score=368.60  Aligned_cols=258  Identities=28%  Similarity=0.476  Sum_probs=207.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      +..++|.+.+.||+|+||.||+|.+.    .+..||||.+... .....+.+.+|+++++.++||||+++++++.++...
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            44568999999999999999999974    3445999999764 334457799999999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++..   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       126 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  199 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR  199 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             EEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence            9999999999999999765   35799999999999999999999999   99999999999999999999999999999


Q ss_pred             ecCCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          338 LLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       338 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ........  ......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....      .+.......... 
T Consensus       200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~------~~~~~~~~~~~~-  272 (325)
T 3kul_A          200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN------RDVISSVEEGYR-  272 (325)
T ss_dssp             ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH------HHHHHHHHTTCC-
T ss_pred             ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH------HHHHHHHHcCCC-
Confidence            87543222  2233456889999999998999999999999999999999 9999964321      222222222111 


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                           ... ...++..   +.+++.+||+.||++||++.+|++.|+..
T Consensus       273 -----~~~-~~~~~~~---l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          273 -----LPA-PMGCPHA---LHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             -----CCC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----CCC-CCCcCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 011 1123333   44588899999999999999999999864


No 31 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.7e-45  Score=372.16  Aligned_cols=249  Identities=22%  Similarity=0.328  Sum_probs=205.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++...  .....+.+.+|+++|+.++||||+++++++......|+|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            345899999999999999999997 47899999998654  333456788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++|+|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++...
T Consensus        93 ~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             ECCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            9999999999999765    4689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCCC-CcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...  .....+||+.|+|||++.+..+. .++|||||||++|||++|+.||....      ..+..........      
T Consensus       166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~------  231 (328)
T 3fe3_A          166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERVLRGKY------  231 (328)
T ss_dssp             SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC------
T ss_pred             CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC------
Confidence            332  23456899999999999887765 78999999999999999999996432      2232333322111      


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .+.. ..+.   .+.+++.+||+.||.+|||+.|++++
T Consensus       232 -~~p~-~~s~---~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          232 -RIPF-YMST---DCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             -CCCT-TSCH---HHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             -CCCC-CCCH---HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence             1111 1223   34458889999999999999999753


No 32 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=2.3e-45  Score=370.08  Aligned_cols=270  Identities=26%  Similarity=0.376  Sum_probs=209.6

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC----ee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA----HR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~----~~  257 (521)
                      .+..++|++.+.||+|+||+||+|.+. ++.||||++..... ....+..|+.++++++||||+++++++....    ..
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   97 (322)
T 3soc_A           20 YFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL   97 (322)
T ss_dssp             EETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence            456678999999999999999999985 78999999865432 3345566999999999999999999998754    46


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeeecCCCCCCeEeCCCCCceE
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-------EPKVVHRDIKSSNILLDKQWNPKL  330 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-------~~~iiHrDik~~NILl~~~~~vkL  330 (521)
                      ++||||+++|+|.++++..     .+++..++.++.|++.||+|||+.+       .++|+||||||+|||++.++.+||
T Consensus        98 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred             EEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence            9999999999999999764     5899999999999999999999751       338999999999999999999999


Q ss_pred             eecccceecCCCCcc-eeecccccccccccccccC-----CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcc-----
Q 009979          331 SDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYAST-----GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV-----  399 (521)
Q Consensus       331 ~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~-----  399 (521)
                      +|||+++........ ......||+.|+|||++.+     ..++.++|||||||++|||+||+.||.........     
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  252 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE  252 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence            999999877543322 2334679999999999876     35667889999999999999999999765432221     


Q ss_pred             -----cHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          400 -----NLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       400 -----~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                           ....+ ............+...+..   ......+.+++.+||+.||++|||+.+|++.|+..
T Consensus       253 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l  316 (322)
T 3soc_A          253 IGQHPSLEDM-QEVVVHKKKRPVLRDYWQK---HAGMAMLCETIEECWDHDAEARLSAGCVGERITQM  316 (322)
T ss_dssp             HCSSCCHHHH-HHHHTTSCCCCCCCGGGGS---SHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hccCCchhhh-hhhhhcccCCCCccccccc---cchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                 11122 2222222111222222222   23344566688899999999999999999999853


No 33 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=9.1e-45  Score=360.95  Aligned_cols=261  Identities=26%  Similarity=0.415  Sum_probs=205.5

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|.+...   .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A            9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            4568999999999999999999965 6889999998543   23344678899999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++++|.+++...    .++++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        89 v~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            99999999999999765    4789999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ............||+.|+|||.+.+..++.++|||||||++|||+||+.||....      ..+........... . ..
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~~~-~-~~  233 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIAIKHIQDSVP-N-VT  233 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC------HHHHHHHHHSSCCC-C-HH
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhhccCC-C-cc
Confidence            5444344455679999999999999999999999999999999999999996432      12222222221100 0 00


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhccC
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRP-KMGHVIHMLEAEE  463 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-t~~evl~~L~~~~  463 (521)
                      .... ...+.   .+.+++.+||+.||.+|| ++.++.+.|+...
T Consensus       234 ~~~~-~~~~~---~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          234 TDVR-KDIPQ---SLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HHSC-TTSCH---HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             hhcc-cCCCH---HHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            0011 11233   344588899999999998 8999999998654


No 34 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=6.2e-45  Score=369.25  Aligned_cols=252  Identities=23%  Similarity=0.266  Sum_probs=207.0

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|++.+.||+|+||.||+|... +++.||+|.+.+..   ......+..|+++++.++||||+++++++.+....|+
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence            3468999999999999999999976 58899999996542   2344678889999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++..
T Consensus        83 v~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           83 VMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            99999999999999765    4689999999999999999999999   9999999999999999999999999999864


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........       
T Consensus       156 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~-------  221 (337)
T 1o6l_A          156 ISD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELILMEE-------  221 (337)
T ss_dssp             CCT-TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC-------
T ss_pred             ccC-CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHHHcCC-------
Confidence            322 223445789999999999999999999999999999999999999996432      222222222211       


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHMLE  460 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~  460 (521)
                      ..+.. ..+.   .+.+++.+||+.||++||     ++.+++++--
T Consensus       222 ~~~p~-~~s~---~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          222 IRFPR-TLSP---EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             CCCCT-TSCH---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             CCCCC-CCCH---HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence            01111 1233   344588899999999999     8999986543


No 35 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=2.4e-45  Score=387.45  Aligned_cols=263  Identities=24%  Similarity=0.431  Sum_probs=215.1

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ...+++..++|.+.+.||+|+||.||+|.++++..||||++.... ...+.|.+|+++|+.++||||+++++++. ....
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~  257 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI  257 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence            455688889999999999999999999999888899999987644 34678999999999999999999999987 5678


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++...  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~  332 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR  332 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred             EEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence            99999999999999997541  23678899999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      ..............+|+.|+|||++....++.++|||||||+||||+| |+.||....      ..+..........   
T Consensus       333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~~---  403 (454)
T 1qcf_A          333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRALERGYR---  403 (454)
T ss_dssp             GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHTCC---
T ss_pred             EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC---
Confidence            764332222233456889999999998999999999999999999999 999996432      2222222222111   


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      .  +  ....++..   +.+++.+||+.||++|||+.+|++.|+...
T Consensus       404 ~--~--~~~~~~~~---l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          404 M--P--RPENCPEE---LYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             C--C--CCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             C--C--CCCCCCHH---HHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            0  0  11223444   445888999999999999999999998754


No 36 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=2e-44  Score=368.88  Aligned_cols=252  Identities=23%  Similarity=0.319  Sum_probs=205.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh------hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ------AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      .+.|.+.+.||+|+||.||+|... ++..||+|.+......      ..+.+.+|+.+|+.++||||+++++++.+....
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            357999999999999999999976 5889999999754322      347789999999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC----CceEeec
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW----NPKLSDF  333 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~----~vkL~DF  333 (521)
                      ++||||+++|+|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++    .+||+||
T Consensus        91 ~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            9999999999999999754    5799999999999999999999999   999999999999998776    7999999


Q ss_pred             ccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      |+++......  .....+||+.|+|||++.+..++.++|||||||++|+|++|..||....      ..+.+....... 
T Consensus       164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~------~~~~~~~i~~~~-  234 (361)
T 2yab_A          164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITAVS-  234 (361)
T ss_dssp             SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTC-
T ss_pred             CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcC-
Confidence            9999765432  2345679999999999999999999999999999999999999996432      222222222111 


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                        .-.++..    .......+.+++.+||..||++|||+.|++++
T Consensus       235 --~~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h  273 (361)
T 2yab_A          235 --YDFDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (361)
T ss_dssp             --CCCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             --CCCCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              0011111    11112344558889999999999999999854


No 37 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2.1e-44  Score=360.66  Aligned_cols=263  Identities=28%  Similarity=0.469  Sum_probs=204.8

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      +++..++|.+.+.||+|+||.||+|.+.  ..+|+|.++..  .....+.+.+|+++++.++||||+++++++.. ...+
T Consensus        31 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~  107 (307)
T 3lb7_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA  107 (307)
T ss_dssp             CBCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred             EEecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEE
Confidence            3567789999999999999999999864  45899987643  33445778999999999999999999998764 5589


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++.
T Consensus       108 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~  181 (307)
T 3lb7_A          108 IVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             EEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred             EEEecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence            999999999999999765   45799999999999999999999999   999999999999999999999999999986


Q ss_pred             cCC-CCcceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          339 LGA-ERSYVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       339 ~~~-~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ... ..........||+.|+|||++.   +..++.++|||||||++|||++|+.||......      +.+.......  
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~------~~~~~~~~~~--  253 (307)
T 3lb7_A          182 KSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRG--  253 (307)
T ss_dssp             ------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHHT--
T ss_pred             cccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH------HHHHHHHhcC--
Confidence            532 1222334567999999999885   667889999999999999999999999744321      1111122111  


Q ss_pred             ccCCCcccC--CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 009979          415 EGVLDPRLQ--EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFP  465 (521)
Q Consensus       415 ~~~~d~~l~--~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  465 (521)
                        ...+.+.  ...++..+   .+++.+||+.||++||++.+|++.|+.....
T Consensus       254 --~~~~~~~~~~~~~~~~l---~~li~~~l~~~p~~RPs~~~il~~l~~l~~~  301 (307)
T 3lb7_A          254 --YASPDLSKLYKNCPKAM---KRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             --CCCCCSTTSCSSSCHHH---HHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             --CCCcchhhhhcCCcHHH---HHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence              1111111  11234444   4488899999999999999999999865443


No 38 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.5e-44  Score=364.45  Aligned_cols=253  Identities=27%  Similarity=0.386  Sum_probs=201.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      .++|++.+.||+|+||+||+|.+. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.++...++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            358999999999999999999976 688999999865432 334668899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+...
T Consensus        86 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           86 YCSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             CCTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            99999999998754    5689999999999999999999998   9999999999999999999999999999875422


Q ss_pred             C-cceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          343 R-SYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       343 ~-~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      . ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ...    ......   .... 
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~----~~~~~~---~~~~-  229 (323)
T 3tki_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EYS----DWKEKK---TYLN-  229 (323)
T ss_dssp             TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-HHH----HHHTTC---TTST-
T ss_pred             CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-HHH----HHhccc---ccCC-
Confidence            2 222345689999999999977765 7789999999999999999999975543211 111    111110   0111 


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                           +.......+.+++.+||+.||++|||+.|++++
T Consensus       230 -----~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          230 -----PWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             -----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -----ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                 111222344558889999999999999999753


No 39 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=2.6e-44  Score=357.71  Aligned_cols=261  Identities=25%  Similarity=0.377  Sum_probs=202.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCeeeEEEEEeeC----Cee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGR--VRHKNLVRLLGYCAEG----AHR  257 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~hpniv~l~~~~~~~----~~~  257 (521)
                      ..++|++.+.||+|+||+||+|.+ +++.||||++...   ....+..|.+++..  ++||||+++++++...    ...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            346899999999999999999998 5889999998543   33455566777666  7999999999987543    457


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEeCCCCCce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH--------EGLEPKVVHRDIKSSNILLDKQWNPK  329 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~~iiHrDik~~NILl~~~~~vk  329 (521)
                      ++||||+++|+|.++++.     ..+++..++.++.|++.||+|||        +.   +|+||||||+|||++.++.+|
T Consensus        82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k  153 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC  153 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred             EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence            899999999999999954     36899999999999999999999        77   999999999999999999999


Q ss_pred             EeecccceecCCCCcce---eecccccccccccccccCC------CCCCcccchhHHHHHHHHHhC----------CCCC
Q 009979          330 LSDFGLAKLLGAERSYV---TTRVMGTFGYVAPEYASTG------MLNERSDVYSFGILIMEVISG----------RNPV  390 (521)
Q Consensus       330 L~DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG----------~~Pf  390 (521)
                      |+|||+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||+||          +.||
T Consensus       154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf  233 (301)
T 3q4u_A          154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF  233 (301)
T ss_dssp             ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence            99999998764433222   2334799999999999776      455799999999999999999          7888


Q ss_pred             CCCCCCCcccHHHHHHHHhhccccccCCCcccCCC-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          391 DYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK-PCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ....+... .. ..+........    ..+.+... ........+.+++.+||+.||++|||+.+|++.|+..
T Consensus       234 ~~~~~~~~-~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          234 YDVVPNDP-SF-EDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TTTSCSSC-CH-HHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccCCCCc-ch-hhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            65433222 12 22222222111    11111111 1233455667799999999999999999999999864


No 40 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.5e-44  Score=358.97  Aligned_cols=265  Identities=22%  Similarity=0.402  Sum_probs=206.0

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-----CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC--C
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-----DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG--A  255 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~--~  255 (521)
                      +..++|++.+.||+|+||+||+|++.     +++.||||++........+.+.+|+++++.++||||+++++++...  .
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            44568999999999999999999852     5788999999877766778899999999999999999999998653  4


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL  160 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred             ceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence            589999999999999999875   24689999999999999999999998   999999999999999999999999999


Q ss_pred             ceecCCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCC---------CCcccHHHH
Q 009979          336 AKLLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP---------PGEVNLVEW  404 (521)
Q Consensus       336 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~---------~~~~~~~~~  404 (521)
                      ++........  ......||..|+|||.+.+..++.++||||||+++|||+||..||.....         .........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence            9876443221  22334578889999999999999999999999999999999999863210         001111111


Q ss_pred             HHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          405 LKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       405 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      +.........     .. ....++..   +.+++.+||+.||++|||+.++++.|+..
T Consensus       241 ~~~~~~~~~~-----~~-~~~~~~~~---l~~li~~~l~~dp~~Rps~~el~~~L~~l  289 (295)
T 3ugc_A          241 LIELLKNNGR-----LP-RPDGCPDE---IYMIMTECWNNNVNQRPSFRDLALRVDQI  289 (295)
T ss_dssp             HHHHHHTTCC-----CC-CCTTCCHH---HHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHhccCc-----CC-CCcCcCHH---HHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            1122211110     00 11123343   44588899999999999999999999764


No 41 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=4.1e-45  Score=376.42  Aligned_cols=261  Identities=25%  Similarity=0.411  Sum_probs=211.0

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      .+.+..++|.+.+.||+|+||.||+|.+. +++.||||.+.... ....+.|.+|+++|+.++||||+++++++.+....
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence            34667789999999999999999999986 68899999987543 23345688899999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++..   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       188 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~  261 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSR  261 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCce
Confidence            9999999999999999764   34689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCccee-ecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          338 LLGAERSYVT-TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       338 ~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      .......... ....+++.|+|||.+.++.++.++|||||||++|||+| |..||.....      .+ +...+..... 
T Consensus       262 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~------~~-~~~~~~~~~~-  333 (377)
T 3cbl_A          262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN------QQ-TREFVEKGGR-  333 (377)
T ss_dssp             ECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH------HH-HHHHHHTTCC-
T ss_pred             ecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcCCC-
Confidence            7543221111 12345788999999998999999999999999999999 9999964431      11 1222221110 


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                       .   .. +..++..   +.+++.+||+.||++|||+.++++.|+..
T Consensus       334 -~---~~-~~~~~~~---l~~li~~cl~~dP~~Rps~~~i~~~L~~i  372 (377)
T 3cbl_A          334 -L---PC-PELCPDA---VFRLMEQCWAYEPGQRPSFSTIYQELQSI  372 (377)
T ss_dssp             -C---CC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -C---CC-CCCCCHH---HHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence             0   01 1223444   44588899999999999999999999864


No 42 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=8.2e-44  Score=358.69  Aligned_cols=247  Identities=26%  Similarity=0.352  Sum_probs=205.9

Q ss_pred             ccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEeccC
Q 009979          188 FADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDN  266 (521)
Q Consensus       188 ~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~  266 (521)
                      |...+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||||+++++++......++||||+++
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  126 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG  126 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence            677889999999999999976 6899999999776666677899999999999999999999999999999999999999


Q ss_pred             CchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCcce
Q 009979          267 GNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV  346 (521)
Q Consensus       267 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~  346 (521)
                      ++|.+++..     ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++........ .
T Consensus       127 ~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-~  197 (321)
T 2c30_A          127 GALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-K  197 (321)
T ss_dssp             CBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-C
T ss_pred             CCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-c
Confidence            999999864     3689999999999999999999998   999999999999999999999999999987654322 2


Q ss_pred             eecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCC-C
Q 009979          347 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE-K  425 (521)
Q Consensus       347 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~  425 (521)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+........      ..+.+.. .
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~------~~~~~~~~~  265 (321)
T 2c30_A          198 RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRLRDS------PPPKLKNSH  265 (321)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS------SCCCCTTGG
T ss_pred             cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcC------CCCCcCccc
Confidence            345679999999999999999999999999999999999999996432      12222222211      1111111 1


Q ss_pred             ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          426 PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       426 ~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ..+.   .+.+++.+||+.||++|||+.+++++
T Consensus       266 ~~~~---~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          266 KVSP---VLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             GSCH---HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cCCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1223   34458889999999999999999864


No 43 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=1.9e-44  Score=361.68  Aligned_cols=263  Identities=20%  Similarity=0.307  Sum_probs=203.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ..++|++.+.||+|+||+||+|.+.+++.||+|++.....  .....+.+|+++++.++||||+++++++.++...++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            4568999999999999999999998899999999865432  23467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++ +|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        99 e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           99 EFMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             ECCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             cCCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            99975 888888765   35689999999999999999999999   999999999999999999999999999997643


Q ss_pred             CCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC---
Q 009979          342 ERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV---  417 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---  417 (521)
                      ... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........   ...+............   
T Consensus       172 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          172 PVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGG
T ss_pred             Ccc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhh
Confidence            322 2344578999999999876 5689999999999999999999999976543322   2222221111100000   


Q ss_pred             ---------CCcccCCCc----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          418 ---------LDPRLQEKP----CSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       418 ---------~d~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                               ....+...+    .+....++.+++.+||+.||++|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                     000000000    0112234566888999999999999999985


No 44 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=2.3e-45  Score=391.53  Aligned_cols=264  Identities=23%  Similarity=0.416  Sum_probs=217.1

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      +..+++..++|++.+.||+|+||.||+|.+.. +..||||.+.... ...+.|.+|+++|++++||||++++++|.+...
T Consensus       212 ~~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~  290 (495)
T 1opk_A          212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP  290 (495)
T ss_dssp             SSCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ccccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence            45567778899999999999999999999874 7889999987543 345789999999999999999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .+|||||+++|+|.++++...  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a  365 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS  365 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred             EEEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence            999999999999999998652  35689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      +..............+|+.|+|||++.+..++.++|||||||+||||+| |..||......   ...+.    +....  
T Consensus       366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~~----~~~~~--  436 (495)
T 1opk_A          366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYEL----LEKDY--  436 (495)
T ss_dssp             ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHH----HHTTC--
T ss_pred             eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHHH----HHcCC--
Confidence            9765433333334456789999999999999999999999999999999 99999754322   22221    11110  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                         ... ....++..   +.+++.+||+.||++|||+.+|++.|+...
T Consensus       437 ---~~~-~~~~~~~~---l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          437 ---RME-RPEGCPEK---VYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             ---CCC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ---CCC-CCCCCCHH---HHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence               001 11223444   445888999999999999999999998754


No 45 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=1.4e-43  Score=353.78  Aligned_cols=278  Identities=36%  Similarity=0.660  Sum_probs=221.3

Q ss_pred             cchhhhhhcCCCcccc------ceEccCCcEEEEEEEEcCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCee
Q 009979          176 YTLRELEVSTNGFADE------NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVRHKNLV  245 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~------~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~hpniv  245 (521)
                      |++.++...++.|...      +.||+|+||.||+|.+ +++.||+|++....    ....+.+.+|+++++.++||||+
T Consensus        15 ~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~   93 (307)
T 2nru_A           15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV   93 (307)
T ss_dssp             CCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeE
Confidence            4566666666666655      8999999999999987 58899999986532    33457789999999999999999


Q ss_pred             eEEEEEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC
Q 009979          246 RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ  325 (521)
Q Consensus       246 ~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~  325 (521)
                      ++++++.+....++||||+++++|.+++.... ....+++..++.++.|++.||+|||+.   +|+||||||+|||++.+
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~  169 (307)
T 2nru_A           94 ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA  169 (307)
T ss_dssp             CEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred             EEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCC
Confidence            99999999999999999999999999997542 235789999999999999999999998   99999999999999999


Q ss_pred             CCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHH
Q 009979          326 WNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEW  404 (521)
Q Consensus       326 ~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~  404 (521)
                      +.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|++|..||..........  .+
T Consensus       170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~  246 (307)
T 2nru_A          170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL--DI  246 (307)
T ss_dssp             CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTT--HH
T ss_pred             CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHH--HH
Confidence            99999999999876543222 2334679999999998865 58999999999999999999999998655433221  11


Q ss_pred             HHHHhh-ccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          405 LKTMVT-NRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       405 ~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...... .......+++.+.. ........+.+++.+||+.||.+|||+.+++++|+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l  304 (307)
T 2nru_A          247 KEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM  304 (307)
T ss_dssp             HHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHhhhhhhhhhhhccccccc-cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            122111 11122333443332 2445566777899999999999999999999999864


No 46 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=9.4e-45  Score=373.19  Aligned_cols=258  Identities=27%  Similarity=0.481  Sum_probs=197.5

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      +..++|.+.+.||+|+||.||+|++.    ++..||||.+... .....+.|.+|+.++++++||||+++++++.+....
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            44568999999999999999999864    4677999998754 334457799999999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++..   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       122 ~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  195 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR  195 (373)
T ss_dssp             EEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred             EEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence            9999999999999999865   35789999999999999999999998   99999999999999999999999999998


Q ss_pred             ecCCCCcce--eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          338 LLGAERSYV--TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       338 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      .........  .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....      ..+...........
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------~~~~~~~i~~~~~~  269 (373)
T 2qol_A          196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS------NQDVIKAVDEGYRL  269 (373)
T ss_dssp             ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------HHHHHHHHHTTEEC
T ss_pred             ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCCC
Confidence            765432221  222345788999999999999999999999999999998 999996432      12222222211110


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                           +  ....++.   .+.+++.+||+.||++||++.+|++.|+..
T Consensus       270 -----~--~~~~~~~---~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          270 -----P--PPMDCPA---ALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             -----C--CCTTCBH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----C--CCccccH---HHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence                 0  0111333   345588899999999999999999999865


No 47 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.5e-44  Score=372.39  Aligned_cols=251  Identities=20%  Similarity=0.275  Sum_probs=190.5

Q ss_pred             Ccccc-ceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHH-hcCCCCCeeeEEEEEee----CCeeeE
Q 009979          187 GFADE-NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAI-GRVRHKNLVRLLGYCAE----GAHRML  259 (521)
Q Consensus       187 ~~~~~-~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l-~~l~hpniv~l~~~~~~----~~~~~l  259 (521)
                      +|.+. +.||+|+||+||+|.+. +++.||||++...     ..+.+|++++ +..+||||+++++++..    ....||
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l  136 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI  136 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence            56655 78999999999999976 5888999998532     4566788887 45589999999999875    567899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCceEeecccc
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPKLSDFGLA  336 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~vkL~DFGla  336 (521)
                      |||||++|+|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||++
T Consensus       137 v~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence            999999999999998652  34699999999999999999999998   9999999999999987   788999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcc-cHHHHHHHHhhccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV-NLVEWLKTMVTNRNAE  415 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~  415 (521)
                      +......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+.    .... 
T Consensus       212 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~----~~~~-  284 (400)
T 1nxk_A          212 KETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR----MGQY-  284 (400)
T ss_dssp             EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH----HTCC-
T ss_pred             cccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH----cCcc-
Confidence            8754322  234568999999999999999999999999999999999999999765433211 1111111    1110 


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      ....+.  ....+.   .+.+++.+||+.||++|||+.+++++-
T Consensus       285 ~~~~~~--~~~~s~---~~~~li~~~L~~dP~~Rpt~~eil~hp  323 (400)
T 1nxk_A          285 EFPNPE--WSEVSE---EVKMLIRNLLKTEPTQRMTITEFMNHP  323 (400)
T ss_dssp             CCCTTT--TTTSCH---HHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             cCCCcc--cccCCH---HHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence            001111  111233   345588899999999999999998753


No 48 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=9.4e-45  Score=379.94  Aligned_cols=266  Identities=22%  Similarity=0.281  Sum_probs=213.5

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEcC-CcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEe
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCA  252 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~  252 (521)
                      .++++++..++|++.++||+|+||+||+|++.+ ++.||+|++.+...   .....+..|+.++..++||||++++++|.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            366677888999999999999999999999864 77899999865322   12234888999999999999999999999


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEee
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD  332 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~D  332 (521)
                      +....|||||||++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+||||+.++++||+|
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D  218 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD  218 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence            999999999999999999999864   35799999999999999999999998   999999999999999999999999


Q ss_pred             cccceecCCCCcceeeccccccccccccccc-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYAS-----TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       333 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ||+++.............+||+.|+|||++.     ...++.++|||||||++|||++|+.||....      ..+....
T Consensus       219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~  292 (437)
T 4aw2_A          219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGK  292 (437)
T ss_dssp             CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHH
T ss_pred             hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHh
Confidence            9999877655544455578999999999986     5679999999999999999999999996432      2222222


Q ss_pred             HhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 009979          408 MVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHK--RPKMGHVIHMLE  460 (521)
Q Consensus       408 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L~  460 (521)
                      .+....  .+.-|... ...+..   +.+++.+||..+|++  ||++.|++++--
T Consensus       293 i~~~~~--~~~~p~~~-~~~s~~---~~dLi~~lL~~~~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          293 IMNHKE--RFQFPTQV-TDVSEN---AKDLIRRLICSREHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             HHTHHH--HCCCCSSC-CCSCHH---HHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred             hhhccc--cccCCccc-ccCCHH---HHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence            222110  00011110 112333   445788999888888  999999986543


No 49 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.4e-44  Score=375.69  Aligned_cols=266  Identities=21%  Similarity=0.285  Sum_probs=213.8

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEe
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCA  252 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~  252 (521)
                      .++++++..++|++.++||+|+||.||+|++. +++.||+|++.+..   ....+.+..|+.+++.++||||++++++|.
T Consensus        60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~  139 (410)
T 3v8s_A           60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ  139 (410)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            35667778889999999999999999999976 57889999986532   122345788999999999999999999999


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEee
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD  332 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~D  332 (521)
                      +....|||||||+||+|.++++..     .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++++||+|
T Consensus       140 ~~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D  211 (410)
T 3v8s_A          140 DDRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD  211 (410)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEec
Confidence            999999999999999999999754     589999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCcceeecccccccccccccccCCC----CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH
Q 009979          333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM----LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM  408 (521)
Q Consensus       333 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~  408 (521)
                      ||+++.............+||+.|+|||++.+..    ++.++|||||||++|||++|+.||....      ..+.....
T Consensus       212 FG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i  285 (410)
T 3v8s_A          212 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKI  285 (410)
T ss_dssp             CTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHH
T ss_pred             cceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHH
Confidence            9999987655444445678999999999997655    8899999999999999999999996432      22223332


Q ss_pred             hhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhhccC
Q 009979          409 VTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHK--RPKMGHVIHMLEAEE  463 (521)
Q Consensus       409 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~--RPt~~evl~~L~~~~  463 (521)
                      ......  +.-|.  ....+..   +.+|+.+||..+|.+  ||++.||+++---..
T Consensus       286 ~~~~~~--~~~p~--~~~~s~~---~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~  335 (410)
T 3v8s_A          286 MNHKNS--LTFPD--DNDISKE---AKNLICAFLTDREVRLGRNGVEEIKRHLFFKN  335 (410)
T ss_dssp             HTHHHH--CCCCT--TCCCCHH---HHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred             Hhcccc--ccCCC--cccccHH---HHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence            221110  00010  0112333   445888999999998  999999997654433


No 50 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=8.8e-45  Score=358.22  Aligned_cols=261  Identities=22%  Similarity=0.381  Sum_probs=198.0

Q ss_pred             hhhhhcCCCccccceEccCCcEEEEEEEEcC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEee
Q 009979          179 RELEVSTNGFADENVIGEGGYGIVYHGVLED----NTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE  253 (521)
Q Consensus       179 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~  253 (521)
                      +++++..++|++.+.||+|+||.||+|.+..    +..||+|.+.... ....+.+.+|+.+++.++||||+++++++. 
T Consensus         8 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-   86 (281)
T 1mp8_A            8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-   86 (281)
T ss_dssp             -CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred             cceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence            3446677899999999999999999999743    4469999886543 334567899999999999999999999985 


Q ss_pred             CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeec
Q 009979          254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDF  333 (521)
Q Consensus       254 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DF  333 (521)
                      ++..++||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+||
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df  160 (281)
T 1mp8_A           87 ENPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDF  160 (281)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-
T ss_pred             cCccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcc
Confidence            45689999999999999999865   34689999999999999999999998   9999999999999999999999999


Q ss_pred             ccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      |+++..............+|+.|+|||.+.+..++.++|||||||++|||++ |..||......   ....   ......
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~~---~i~~~~  234 (281)
T 1mp8_A          161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIG---RIENGE  234 (281)
T ss_dssp             ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHH---HHHTTC
T ss_pred             ccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHHH---HHHcCC
Confidence            9998775544333444567889999999998999999999999999999997 99999754322   2221   111111


Q ss_pred             ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          413 NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       413 ~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .      ..+. ..++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       235 ~------~~~~-~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~l~~~  274 (281)
T 1mp8_A          235 R------LPMP-PNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI  274 (281)
T ss_dssp             C------CCCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C------CCCC-CCCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            0      0111 123333   44588899999999999999999999864


No 51 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=2.9e-44  Score=366.50  Aligned_cols=255  Identities=21%  Similarity=0.332  Sum_probs=204.4

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-----GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ++|++.+.||+|+||+||+|.+. +++.||||++....     ....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            47899999999999999999975 68899999985422     2235778999999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC---ceEeecccc
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLA  336 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~---vkL~DFGla  336 (521)
                      |||||++|+|.+++.........+++..++.++.|++.||+|||++   +|+||||||+|||++.++.   +||+|||++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            9999999999988865433345689999999999999999999999   9999999999999976554   999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      +...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....       .+......... .  
T Consensus       181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~i~~~~-~--  249 (351)
T 3c0i_A          181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLFEGIIKGK-Y--  249 (351)
T ss_dssp             EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHHHHHHHTC-C--
T ss_pred             eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHHHHHHcCC-C--
Confidence            8875432 22345679999999999999999999999999999999999999996431       11222222111 0  


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ..++..    .......+.+++.+||+.||++|||+.+++++
T Consensus       250 ~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h  287 (351)
T 3c0i_A          250 KMNPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALNH  287 (351)
T ss_dssp             CCCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            011100    01112345568889999999999999999853


No 52 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.8e-44  Score=352.59  Aligned_cols=258  Identities=26%  Similarity=0.439  Sum_probs=212.4

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .+..++|++.+.||+|+||.||+|.+.++..||+|.+..... ..+.+.+|+++++.++||||+++++++.+....++||
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   82 (267)
T 3t9t_A            4 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT   82 (267)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEchhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence            456678999999999999999999998888999999876543 3467899999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +++||||||+||+++.++.+||+|||+++....
T Consensus        83 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           83 EFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             CCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             eCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence            999999999999865   35689999999999999999999999   999999999999999999999999999987644


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ..........||+.|+|||.+.+..++.++||||||+++|||++ |+.||....      ..+..........   ..  
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~~~~---~~--  225 (267)
T 3t9t_A          157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGFR---LY--  225 (267)
T ss_dssp             HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTCC---CC--
T ss_pred             ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhcCCc---CC--
Confidence            33223334567889999999998899999999999999999999 899996432      2222222222110   01  


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        .....+..   +.+++.+||+.||++||++.++++.|+..
T Consensus       226 --~~~~~~~~---l~~li~~~l~~~p~~Rps~~~ll~~L~~l  262 (267)
T 3t9t_A          226 --KPRLASTH---VYQIMNHCWRERPEDRPAFSRLLRQLAEI  262 (267)
T ss_dssp             --CCTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCccCcHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              11123333   44588899999999999999999999753


No 53 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=356.43  Aligned_cols=274  Identities=21%  Similarity=0.263  Sum_probs=213.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC--eeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA--HRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~--~~~l  259 (521)
                      ..++|.+.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++....  ..++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence            3457999999999999999999976 48899999987543 233567889999999999999999999998765  7799


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----CCCCCceEeeccc
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL----DKQWNPKLSDFGL  335 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl----~~~~~vkL~DFGl  335 (521)
                      ||||+++++|.+++..... ...+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+
T Consensus        87 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           87 IMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             EEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             EEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            9999999999999986532 23489999999999999999999999   99999999999999    7888899999999


Q ss_pred             ceecCCCCcceeeccccccccccccccc--------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAS--------TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ++.......  .....||+.|+|||++.        +..++.++|||||||++|||+||+.||........  ..+.+..
T Consensus       163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~  238 (319)
T 4euu_A          163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYK  238 (319)
T ss_dssp             CEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHH
T ss_pred             ceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHH
Confidence            998654332  23457999999999885        57899999999999999999999999975433221  1222222


Q ss_pred             Hhhcccc---cc---CCC------cc--cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 009979          408 MVTNRNA---EG---VLD------PR--LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFP  465 (521)
Q Consensus       408 ~~~~~~~---~~---~~d------~~--l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  465 (521)
                      .......   ..   ...      +.  ............+.+++.+||+.||++|||+.|+++..+....+
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~  310 (319)
T 4euu_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (319)
T ss_dssp             HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred             HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence            2221110   00   000      00  11122345555666789999999999999999999999876543


No 54 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=7.9e-44  Score=366.95  Aligned_cols=253  Identities=23%  Similarity=0.344  Sum_probs=205.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      +..++|.+.+.||+|+||.||+|... +++.||+|++.+..   ......+.+|+++|+.++||||+++++++.+....|
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            44568999999999999999999976 47889999986532   233467888999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||+.+|+|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++.
T Consensus        92 lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             EEECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeee
Confidence            999999999999999864    5799999999999999999999999   999999999999999999999999999997


Q ss_pred             cCCCCcceeecccccccccccccccC---CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYAST---GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      +...  ......+||+.|+|||++.+   ..++.++|||||||++|||++|+.||...........   ........   
T Consensus       165 ~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~---~~~~~~~~---  236 (384)
T 4fr4_A          165 LPRE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI---VHTFETTV---  236 (384)
T ss_dssp             CCTT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH---HHHHHHCC---
T ss_pred             ccCC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH---HHHHhhcc---
Confidence            6433  23455789999999999863   4589999999999999999999999975543322222   22221110   


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPK-MGHVIHM  458 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt-~~evl~~  458 (521)
                          ..+. ...+.   .+.+++.+||+.||.+||+ +.+++.+
T Consensus       237 ----~~~p-~~~s~---~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          237 ----VTYP-SAWSQ---EMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             ----CCCC-TTSCH---HHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             ----cCCC-CcCCH---HHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence                0111 11233   4455888999999999998 7777653


No 55 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-44  Score=364.83  Aligned_cols=268  Identities=26%  Similarity=0.386  Sum_probs=214.9

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcC------CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGY  250 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~  250 (521)
                      +..+++..++|++.+.||+|+||.||+|.+.+      ++.||+|.+.... ....+.+.+|+++++.++||||++++++
T Consensus        39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  118 (343)
T 1luf_A           39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV  118 (343)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            44556778899999999999999999999752      3789999987643 3345779999999999999999999999


Q ss_pred             EeeCCeeeEEEEeccCCchHHhhhcCCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 009979          251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGP--------------------HSPLTWEIRMNIILGTAKGLTYLHEGLEPKV  310 (521)
Q Consensus       251 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~al~~LH~~~~~~i  310 (521)
                      +.+....++||||+++|+|.+++......                    ...+++..++.++.|++.||+|||++   +|
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i  195 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF  195 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            99999999999999999999999864211                    25789999999999999999999999   99


Q ss_pred             eecCCCCCCeEeCCCCCceEeecccceecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCC
Q 009979          311 VHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRN  388 (521)
Q Consensus       311 iHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~  388 (521)
                      +||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |..
T Consensus       196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999987643322 22234568999999999998899999999999999999999 999


Q ss_pred             CCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          389 PVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       389 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                      ||....      ..+...... .....     .+ ...++.   .+.+++.+||+.||++||++.++++.|+....
T Consensus       276 p~~~~~------~~~~~~~~~-~~~~~-----~~-~~~~~~---~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          276 PYYGMA------HEEVIYYVR-DGNIL-----AC-PENCPL---ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             TTTTSC------HHHHHHHHH-TTCCC-----CC-CTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             cCCCCC------hHHHHHHHh-CCCcC-----CC-CCCCCH---HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            996432      122222222 21111     11 112333   34458889999999999999999999987543


No 56 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=7e-44  Score=359.25  Aligned_cols=253  Identities=18%  Similarity=0.274  Sum_probs=206.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      .++|.+.+.||+|+||.||+|.+. ++..||+|.+... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            468999999999999999999976 5788999988654 33456788999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC--CCCceEeecccceecCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK--QWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~--~~~vkL~DFGla~~~~~  341 (521)
                      +++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.  ++.+||+|||+++....
T Consensus        83 ~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           83 ISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred             CCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence            9999999999764   35789999999999999999999999   9999999999999987  78999999999998754


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      ..  ......||+.|+|||++.+..++.++|||||||++|+|++|..||....      ..+.+........       .
T Consensus       157 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~-------~  221 (321)
T 1tki_A          157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEY-------T  221 (321)
T ss_dssp             TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCC-------C
T ss_pred             CC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCC-------C
Confidence            32  2345679999999999999889999999999999999999999996432      2222232222110       0


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      +...........+.+++.+||+.||.+|||+.|++++-
T Consensus       222 ~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp  259 (321)
T 1tki_A          222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence            00000111223455688899999999999999998743


No 57 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=1.2e-44  Score=381.77  Aligned_cols=263  Identities=27%  Similarity=0.413  Sum_probs=208.6

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ...+++..++|++.+.||+|+||.||+|.+.++..||||++.... ...+.|.+|+++|++++||||+++++++.+ ...
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            445677888999999999999999999999888889999987644 335678999999999999999999999976 678


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++...  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~  328 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR  328 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred             EEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccce
Confidence            99999999999999997531  24689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      ..............+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....      ..+.+........   
T Consensus       329 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~~---  399 (452)
T 1fmk_A          329 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERGYR---  399 (452)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTTCC---
T ss_pred             ecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC---
Confidence            765433333334557889999999998999999999999999999999 999996432      2222222222111   


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                         ... ...++..   +.+++.+||+.||++|||+.++++.|+...
T Consensus       400 ---~~~-~~~~~~~---l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          400 ---MPC-PPECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             ---CCC-CTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             ---CCC-CCCCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence               001 1123444   445888999999999999999999998754


No 58 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=2.1e-44  Score=367.87  Aligned_cols=268  Identities=24%  Similarity=0.358  Sum_probs=213.1

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEE
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLL  248 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~  248 (521)
                      ....+++..++|++.+.||+|+||.||+|.+.      +++.||||++.... ....+.+.+|+++++++ +||||++++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            35667888899999999999999999999842      35689999997643 33446789999999999 799999999


Q ss_pred             EEEeeCC-eeeEEEEeccCCchHHhhhcCCCC------------------------------------------------
Q 009979          249 GYCAEGA-HRMLVYEYIDNGNLEQWLHGDVGP------------------------------------------------  279 (521)
Q Consensus       249 ~~~~~~~-~~~lV~e~~~~g~L~~~l~~~~~~------------------------------------------------  279 (521)
                      +++.+.. ..++||||+++|+|.++++.....                                                
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            9998755 489999999999999999865321                                                


Q ss_pred             --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCc-
Q 009979          280 --------------HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-  344 (521)
Q Consensus       280 --------------~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~-  344 (521)
                                    ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                          12289999999999999999999999   999999999999999999999999999987644322 


Q ss_pred             ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccC
Q 009979          345 YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ  423 (521)
Q Consensus       345 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  423 (521)
                      .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.......      .+...+.....     ....
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~-----~~~~  318 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTR-----MRAP  318 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCC-----CCCC
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCC-----CCCC
Confidence            23345678999999999999999999999999999999998 999997544321      11112211111     0111


Q ss_pred             CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          424 EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       424 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                       ...+.   .+.+++.+||+.||.+|||+.+++++|+..
T Consensus       319 -~~~~~---~l~~li~~~l~~dP~~Rps~~ell~~L~~~  353 (359)
T 3vhe_A          319 -DYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  353 (359)
T ss_dssp             -TTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCCCH---HHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence             11233   344588899999999999999999999753


No 59 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.3e-44  Score=369.46  Aligned_cols=263  Identities=25%  Similarity=0.421  Sum_probs=212.9

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEEEE
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE--------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLLGY  250 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~~~  250 (521)
                      +++..++|.+.+.||+|+||.||+|.+.        .+..||+|++.... ......+.+|+++++.+ +||||++++++
T Consensus        64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            3566779999999999999999999863        23579999987653 33447788999999999 89999999999


Q ss_pred             EeeCCeeeEEEEeccCCchHHhhhcCCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 009979          251 CAEGAHRMLVYEYIDNGNLEQWLHGDVG------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS  318 (521)
Q Consensus       251 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~  318 (521)
                      +.+....++||||+++|+|.+++.....            ....+++..++.++.|++.||+|||+.   +|+||||||+
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~  220 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR  220 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence            9999999999999999999999987532            124699999999999999999999999   9999999999


Q ss_pred             CeEeCCCCCceEeecccceecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCC
Q 009979          319 NILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPP  396 (521)
Q Consensus       319 NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~  396 (521)
                      |||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||++ |..||....  
T Consensus       221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~--  298 (382)
T 3tt0_A          221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--  298 (382)
T ss_dssp             GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred             eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence            99999999999999999987644322 22334567899999999999999999999999999999999 999996432  


Q ss_pred             CcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          397 GEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                          ..+..........      ... ...++..   +.+++.+||+.||++|||+.+|++.|+..
T Consensus       299 ----~~~~~~~~~~~~~------~~~-~~~~~~~---l~~li~~~l~~dP~~Rps~~ell~~L~~~  350 (382)
T 3tt0_A          299 ----VEELFKLLKEGHR------MDK-PSNCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRI  350 (382)
T ss_dssp             ----HHHHHHHHHTTCC------CCC-CSSCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHcCCC------CCC-CccCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence                2222222222111      111 1123333   44588899999999999999999999864


No 60 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=4.9e-44  Score=364.60  Aligned_cols=254  Identities=22%  Similarity=0.320  Sum_probs=190.1

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      +...++|++.+.||+|+||.||+|.+. +++.||||++....  ..+.+.+|+++++.++||||+++++++.+....++|
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  126 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV  126 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence            445568999999999999999999986 47789999987543  346688899999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCceEeecccce
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPKLSDFGLAK  337 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~vkL~DFGla~  337 (521)
                      |||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||+++
T Consensus       127 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          127 LELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             ECCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             EEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            9999999999999764    4689999999999999999999998   9999999999999975   8899999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      .....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||......     ...+...... .. ..
T Consensus       200 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~~i~~~-~~-~~  270 (349)
T 2w4o_A          200 IVEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD-----QFMFRRILNC-EY-YF  270 (349)
T ss_dssp             ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH-----HHHHHHHHTT-CC-CC
T ss_pred             ccCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc-----HHHHHHHHhC-CC-cc
Confidence            75432  2234567999999999999999999999999999999999999999644321     1112222221 11 11


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ..+.     .......+.+++.+||+.||++|||+.+++++
T Consensus       271 ~~~~-----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          271 ISPW-----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             CTTT-----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             CCch-----hhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1111     11122344558889999999999999999863


No 61 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=3.1e-44  Score=368.04  Aligned_cols=267  Identities=17%  Similarity=0.228  Sum_probs=206.1

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEcC------CcEEEEEEeccCChhhH-----------HHHHHHHHHHhcCCCCCee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLED------NTNVAVKNLLNNRGQAE-----------KEFKVEVEAIGRVRHKNLV  245 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~Ei~~l~~l~hpniv  245 (521)
                      ...++|.+.+.||+|+||.||+|.+..      ++.||||.+........           ..+..|+..++.++||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            456689999999999999999999764      36799999876543221           2233466677888999999


Q ss_pred             eEEEEEeeC----CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 009979          246 RLLGYCAEG----AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNIL  321 (521)
Q Consensus       246 ~l~~~~~~~----~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NIL  321 (521)
                      ++++++...    ...+|||||+ +++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil  184 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL  184 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence            999998764    4579999999 99999999875   35799999999999999999999999   9999999999999


Q ss_pred             eC--CCCCceEeecccceecCCCCcce------eecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          322 LD--KQWNPKLSDFGLAKLLGAERSYV------TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       322 l~--~~~~vkL~DFGla~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      ++  .++.+||+|||+++.+.......      .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            98  88999999999998764332211      13355999999999999999999999999999999999999999753


Q ss_pred             CCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          394 RPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...  ........... ......++++.+....++..+.   +++.+||+.||.+||++.+|++.|+..
T Consensus       265 ~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~li~~cl~~~p~~RP~~~~l~~~l~~~  327 (364)
T 3op5_A          265 LKD--PKYVRDSKIRY-RENIASLMDKCFPAANAPGEIA---KYMETVKLLDYTEKPLYENLRDILLQG  327 (364)
T ss_dssp             TTC--HHHHHHHHHHH-HHCHHHHHHHHSCTTCCCHHHH---HHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             ccC--HHHHHHHHHHh-hhhHHHHHHHhcccccCHHHHH---HHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence            322  11121111111 1112233333333333444444   477799999999999999999998754


No 62 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1.4e-44  Score=368.97  Aligned_cols=252  Identities=20%  Similarity=0.288  Sum_probs=200.7

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~  257 (521)
                      +..++|++.+.||+|+||.||+|++. +++.||||++.+..   ....+.+..|+.+++.+ +||||+++++++.+....
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence            34568999999999999999999976 58899999997542   23346678899999988 699999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      |+||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++
T Consensus       100 ~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~  172 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK  172 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence            9999999999999999765    4689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      ..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........    .
T Consensus       173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~----~  241 (353)
T 3txo_A          173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILNDE----V  241 (353)
T ss_dssp             CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC----C
T ss_pred             ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC------HHHHHHHHHcCC----C
Confidence            54322 223445789999999999999899999999999999999999999996432      222333333211    1


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHh
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM------GHVIHML  459 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~------~evl~~L  459 (521)
                         .+.. ..+.   .+.+++.+||+.||++||++      .+++++-
T Consensus       242 ---~~p~-~~~~---~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp  282 (353)
T 3txo_A          242 ---VYPT-WLHE---DATGILKSFMTKNPTMRLGSLTQGGEHAILRHP  282 (353)
T ss_dssp             ---CCCT-TSCH---HHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred             ---CCCC-CCCH---HHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence               1111 1223   34458889999999999998      7777543


No 63 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.5e-44  Score=362.48  Aligned_cols=259  Identities=16%  Similarity=0.177  Sum_probs=208.6

Q ss_pred             CCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      .++|++.+.||+|+||.||+|.. .+++.||||.+.....  .+.+..|+++++.+ +||||+++++++..+...++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46899999999999999999996 4688999998865432  34588899999999 99999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC-----ceEeecccce
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-----PKLSDFGLAK  337 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~-----vkL~DFGla~  337 (521)
                      |+ +++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.     +||+|||+++
T Consensus        86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            99 89999999865   35799999999999999999999999   9999999999999998887     9999999999


Q ss_pred             ecCCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc
Q 009979          338 LLGAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN  411 (521)
Q Consensus       338 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  411 (521)
                      .+......      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~  238 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA  238 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc
Confidence            76443221      124568999999999999999999999999999999999999999866543332222222211110


Q ss_pred             cccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          412 RNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       412 ~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...     ..+ ...++    .+.+++.+||+.||.+||++.+|++.|+..
T Consensus       239 ~~~-----~~~-~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          239 TPI-----EVL-CENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             SCH-----HHH-TTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             CCH-----HHH-hccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence            000     000 01122    455688899999999999999999998753


No 64 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=1.3e-43  Score=366.07  Aligned_cols=252  Identities=21%  Similarity=0.286  Sum_probs=206.8

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      ++|++.+.||+|+||.||+|... +++.||+|.+..........+.+|+++|+.++||||+++++++.+....++||||+
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            47999999999999999999976 58889999987766556678899999999999999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC--CCCCceEeecccceecCCC
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD--KQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~--~~~~vkL~DFGla~~~~~~  342 (521)
                      ++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++  .++.+||+|||+++.....
T Consensus       131 ~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          131 SGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            999999999764   34789999999999999999999999   999999999999997  4577999999999987543


Q ss_pred             CcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCccc
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL  422 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  422 (521)
                      ..  .....||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.+........   ..++..
T Consensus       205 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~---~~~~~~  273 (387)
T 1kob_A          205 EI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDW---EFDEDA  273 (387)
T ss_dssp             SC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCC---CCCSST
T ss_pred             cc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC---CCCccc
Confidence            32  334579999999999999999999999999999999999999996432      1222222222110   011111


Q ss_pred             CCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          423 QEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       423 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      . ...+   ..+.+++.+||+.||++|||+.+++++
T Consensus       274 ~-~~~s---~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          274 F-SSVS---PEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             T-TTSC---HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             c-ccCC---HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            1 1123   344558889999999999999999864


No 65 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.1e-43  Score=358.64  Aligned_cols=252  Identities=22%  Similarity=0.312  Sum_probs=205.0

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh------hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ------AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ++|.+.+.||+|+||.||+|... ++..||+|.+......      ..+.+.+|+.+++.++||||+++++++.+....+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            46899999999999999999976 5889999998654322      3577899999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC----CceEeecc
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW----NPKLSDFG  334 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~----~vkL~DFG  334 (521)
                      +||||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        91 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEECCCSCBHHHHHTTS----SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEcCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            999999999999999754    5789999999999999999999998   999999999999998877    79999999


Q ss_pred             cceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      +++......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....      ..+.+.......  
T Consensus       164 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~--  233 (326)
T 2y0a_A          164 LAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVN--  233 (326)
T ss_dssp             TCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHTC--
T ss_pred             CCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHhcC--
Confidence            999764332  2344679999999999999999999999999999999999999996432      122222222110  


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                           ..+...........+.+++.+||+.||++|||+.+++++-
T Consensus       234 -----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  273 (326)
T 2y0a_A          234 -----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP  273 (326)
T ss_dssp             -----CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred             -----CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence                 0011000111123345588899999999999999998753


No 66 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=3.6e-44  Score=377.99  Aligned_cols=256  Identities=28%  Similarity=0.410  Sum_probs=208.7

Q ss_pred             hhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC-ee
Q 009979          179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA-HR  257 (521)
Q Consensus       179 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~-~~  257 (521)
                      ..+++..++|++.+.||+|+||.||+|.+. ++.||||.+....  ..+.|.+|+++|++++||||+++++++.+.. ..
T Consensus       186 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          186 SGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             TTCBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred             cccccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence            445677889999999999999999999985 7899999997643  4578999999999999999999999987665 78


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.++++...  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~  337 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK  337 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence            99999999999999998752  24578999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      .....    .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......   ..   ..... +.   
T Consensus       338 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~---~~i~~-~~---  403 (450)
T 1k9a_A          338 EASST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV---PRVEK-GY---  403 (450)
T ss_dssp             ECC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH---HHHHT-TC---
T ss_pred             ccccc----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---HHHHc-CC---
Confidence            64322    223367899999999999999999999999999999999 999997554322   11   11111 11   


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        ... .+..++..+   .+++.+||+.||++|||+.++++.|+..
T Consensus       404 --~~~-~p~~~~~~l---~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          404 --KMD-APDGCPPAV---YDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             --CCC-CCTTCCHHH---HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCC-CCCcCCHHH---HHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence              011 112244444   4488899999999999999999999753


No 67 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-44  Score=361.30  Aligned_cols=248  Identities=25%  Similarity=0.285  Sum_probs=192.9

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~  257 (521)
                      ++..++|++.++||+|+||+||+|.+. +++.||||++.....  .....+..|+..+..+ +||||++++++|.++...
T Consensus        53 ~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~  132 (311)
T 3p1a_A           53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL  132 (311)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             chhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEE
Confidence            344468999999999999999999986 689999999865422  2233444455555544 899999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+ +++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.
T Consensus       133 ~lv~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~  205 (311)
T 3p1a_A          133 YLQTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV  205 (311)
T ss_dssp             EEEEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred             EEEEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeee
Confidence            9999999 66999988765   35799999999999999999999998   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      ......  ......||+.|+|||++.+ .++.++|||||||++|||++|..|+...      ..   ......     ..
T Consensus       206 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~------~~---~~~~~~-----~~  268 (311)
T 3p1a_A          206 ELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG------EG---WQQLRQ-----GY  268 (311)
T ss_dssp             ECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH------HH---HHHHTT-----TC
T ss_pred             ecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc------cH---HHHHhc-----cC
Confidence            764332  2344579999999999876 7899999999999999999997765321      11   111111     11


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ..+.+.    ......+.+++.+||+.||++|||+.|+++
T Consensus       269 ~~~~~~----~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          269 LPPEFT----AGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CCHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccc----cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            111111    112234556888999999999999999985


No 68 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=5.7e-44  Score=365.88  Aligned_cols=252  Identities=19%  Similarity=0.308  Sum_probs=204.1

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++....  ....+.+.+|+++++.++||||+++++++.+....|+||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            457999999999999999999975 58899999996543  234467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC---CCceEeeccccee
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ---WNPKLSDFGLAKL  338 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~---~~vkL~DFGla~~  338 (521)
                      ||+++|+|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.+   +.+||+|||+++.
T Consensus       108 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          108 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             CCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            999999999998754    5689999999999999999999999   99999999999999765   4599999999987


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      .....  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....      ..+........ ..    
T Consensus       181 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~~~~~i~~~-~~----  247 (362)
T 2bdw_A          181 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAG-AY----  247 (362)
T ss_dssp             CTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHT-CC----
T ss_pred             ecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhC-CC----
Confidence            64332  2345679999999999999999999999999999999999999996432      12222222211 10    


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      +  +...........+.+++.+||+.||++||++.+++++
T Consensus       248 ~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          248 D--YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             C--CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             C--CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0  0111111122344558889999999999999999854


No 69 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.1e-43  Score=347.86  Aligned_cols=256  Identities=28%  Similarity=0.498  Sum_probs=195.6

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCCh----hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG----QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ++..++|++.+.||+|+||.||+|.+. ++.||+|.+.....    ...+.+.+|+++++.++||||+++++++.++...
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            445678999999999999999999985 88999999865432    2346788999999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC--------CCCce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK--------QWNPK  329 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~--------~~~vk  329 (521)
                      ++||||+++++|.+++..     ..+++..++.++.|++.||+|||+....+|+||||||+|||++.        ++.+|
T Consensus        82 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             EEEEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             EEEEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            999999999999999864     46899999999999999999999981112999999999999986        77899


Q ss_pred             EeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          330 LSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       330 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      |+|||+++......   .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.....      ........
T Consensus       157 l~Dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~  227 (271)
T 3dtc_A          157 ITDFGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG------LAVAYGVA  227 (271)
T ss_dssp             ECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH------HHHHHHHH
T ss_pred             EccCCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHhhh
Confidence            99999998654322   2245799999999999999999999999999999999999999964321      11112222


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      ....     ..... ..++..   +.+++.+||+.||.+|||+.+++++|+.
T Consensus       228 ~~~~-----~~~~~-~~~~~~---~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          228 MNKL-----ALPIP-STCPEP---FAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             TSCC-----CCCCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             cCCC-----CCCCC-cccCHH---HHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            1111     11111 123333   4458889999999999999999999975


No 70 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.6e-44  Score=357.18  Aligned_cols=263  Identities=24%  Similarity=0.433  Sum_probs=217.9

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      ++++++..++|++.+.||+|+||.||+|.+.. +..||+|.+.... ...+.+.+|+++++.++||||+++++++.+...
T Consensus         5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   83 (288)
T 3kfa_A            5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   83 (288)
T ss_dssp             CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            45667788899999999999999999999864 7789999986543 345778899999999999999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~  158 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS  158 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred             EEEEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccc
Confidence            999999999999999998752  35689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ...............||+.|+|||++.+..++.++||||||+++|+|++ |..||......   ...+.+.   ..    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~---~~~~~~~---~~----  228 (288)
T 3kfa_A          159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYELLE---KD----  228 (288)
T ss_dssp             GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHHHHH---TT----
T ss_pred             eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHh---cc----
Confidence            8776554444455668899999999998999999999999999999999 99999754322   2222111   11    


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        ..... ...++.   .+.+++.+||+.||.+||++.++++.|+..
T Consensus       229 --~~~~~-~~~~~~---~l~~li~~~l~~dp~~Rps~~~~~~~l~~~  269 (288)
T 3kfa_A          229 --YRMER-PEGCPE---KVYELMRACWQWNPSDRPSFAEIHQAFETM  269 (288)
T ss_dssp             --CCCCC-CTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCC-CCCCCH---HHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence              01111 112333   344588899999999999999999999764


No 71 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2e-44  Score=360.76  Aligned_cols=265  Identities=28%  Similarity=0.440  Sum_probs=213.3

Q ss_pred             hhhhhcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEE
Q 009979          179 RELEVSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYC  251 (521)
Q Consensus       179 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~  251 (521)
                      ..+++..++|.+.+.||+|+||.||+|.+.      ++..||+|.+.... ....+.+.+|+++++.++||||+++++++
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   95 (314)
T 2ivs_A           16 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC   95 (314)
T ss_dssp             TTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE
Confidence            345667789999999999999999999862      34789999987543 34457788999999999999999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVG--------------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVV  311 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~ii  311 (521)
                      .+....++||||+++|+|.+++.....                    ....+++..++.++.|++.||+|||++   +|+
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iv  172 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV  172 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCc
Confidence            999999999999999999999986532                    123488999999999999999999999   999


Q ss_pred             ecCCCCCCeEeCCCCCceEeecccceecCCCCcce-eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCC
Q 009979          312 HRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNP  389 (521)
Q Consensus       312 HrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~P  389 (521)
                      ||||||+|||++.++.+||+|||+++......... .....||+.|+|||.+.+..++.++|||||||++|||+| |..|
T Consensus       173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999999999999998765433322 234567889999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          390 VDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       390 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      |......   .....    +....     .+... ..++.   .+.+++.+||+.||++||++.++++.|+..
T Consensus       253 ~~~~~~~---~~~~~----~~~~~-----~~~~~-~~~~~---~~~~li~~~l~~dp~~Rps~~~l~~~l~~~  309 (314)
T 2ivs_A          253 YPGIPPE---RLFNL----LKTGH-----RMERP-DNCSE---EMYRLMLQCWKQEPDKRPVFADISKDLEKM  309 (314)
T ss_dssp             STTCCGG---GHHHH----HHTTC-----CCCCC-TTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCHH---HHHHH----hhcCC-----cCCCC-ccCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            9754432   22211    11111     01111 11333   344588899999999999999999999864


No 72 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=4e-44  Score=352.81  Aligned_cols=261  Identities=26%  Similarity=0.442  Sum_probs=213.1

Q ss_pred             hhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          179 RELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       179 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      +++++..++|++.+.||+|+||.||+|.+.++..||+|.+.... ...+.+..|+++++.++||||+++++++.+ +..+
T Consensus         6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   83 (279)
T 1qpc_A            6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIY   83 (279)
T ss_dssp             CTTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             hhcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcE
Confidence            46678888999999999999999999999888899999986543 335678999999999999999999999875 5589


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||+++++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||++..
T Consensus        84 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             EEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            9999999999999997531  13689999999999999999999999   999999999999999999999999999998


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      .............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.....      .+.........     
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~~~~~~~~~-----  227 (279)
T 1qpc_A          159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLERGY-----  227 (279)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHHHHHTTC-----
T ss_pred             ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH------HHHHHHHhccc-----
Confidence            75543333344567889999999998899999999999999999999 9999964321      22222222111     


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                       ... ....++..   +.+++.+||+.||++|||+.++++.|+..
T Consensus       228 -~~~-~~~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          228 -RMV-RPDNCPEE---LYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (279)
T ss_dssp             -CCC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -CCC-CcccccHH---HHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence             011 11123333   44588899999999999999999999864


No 73 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=1.9e-44  Score=370.21  Aligned_cols=262  Identities=26%  Similarity=0.412  Sum_probs=209.1

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG  254 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~  254 (521)
                      ++..++|++.+.||+|+||.||+|.+.      ++..||||++... .......+..|+.+++.++||||+++++++.+.
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  146 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  146 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            345568999999999999999999953      3567999998654 344456788999999999999999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC---Cc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW---NP  328 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~---~v  328 (521)
                      ...++||||+++|+|.+++.....   ....+++..++.++.|++.||+|||+.   +|+||||||+|||++.++   .+
T Consensus       147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~  223 (367)
T 3l9p_A          147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA  223 (367)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred             CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence            999999999999999999976532   235689999999999999999999999   999999999999998554   59


Q ss_pred             eEeecccceecCCCC-cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHH
Q 009979          329 KLSDFGLAKLLGAER-SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLK  406 (521)
Q Consensus       329 kL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~  406 (521)
                      ||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||+| |..||....      ..+...
T Consensus       224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~------~~~~~~  297 (367)
T 3l9p_A          224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLE  297 (367)
T ss_dssp             EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred             EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHH
Confidence            999999998653221 122334568999999999999999999999999999999998 999996432      222222


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .......    .  .. ...++..   +.+++.+||+.||++||++.+|++.|+..
T Consensus       298 ~i~~~~~----~--~~-~~~~~~~---l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          298 FVTSGGR----M--DP-PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHTTCC----C--CC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHcCCC----C--CC-CccCCHH---HHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            2222111    0  01 1123333   44588899999999999999999999764


No 74 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=5.6e-44  Score=369.37  Aligned_cols=258  Identities=23%  Similarity=0.319  Sum_probs=203.2

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~  258 (521)
                      ..++|++.++||+|+||.||+|++. +++.||+|++.+..   ....+.+..|..++.++ +||||+++++++.+....|
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            3457999999999999999999976 47789999997542   22335578899999887 8999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      |||||+++|+|..++...    ..+++..+..++.|++.||+|||+.   +|+||||||+||||+.++++||+|||+++.
T Consensus       130 lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             EEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            999999999999999865    4689999999999999999999999   999999999999999999999999999986


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCc--ccHHHHHHHHhhcccccc
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGE--VNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~  416 (521)
                      .... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  .+..+.+...+.....  
T Consensus       203 ~~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--  279 (396)
T 4dc2_A          203 GLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--  279 (396)
T ss_dssp             CCCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC--
T ss_pred             cccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc--
Confidence            3222 2234557899999999999999999999999999999999999999975432111  1111222222222111  


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHh
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM------GHVIHML  459 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~------~evl~~L  459 (521)
                          .+... .+.   .+.+++.+||+.||++||++      .+|+++-
T Consensus       280 ----~~p~~-~s~---~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp  320 (396)
T 4dc2_A          280 ----RIPRS-LSV---KAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  320 (396)
T ss_dssp             ----CCCTT-SCH---HHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred             ----CCCCc-CCH---HHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence                11111 223   34558889999999999985      5665443


No 75 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=1.4e-43  Score=351.87  Aligned_cols=262  Identities=17%  Similarity=0.207  Sum_probs=210.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEE
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV  260 (521)
                      +..++|++.+.||+|+||.||+|.. .+++.||+|.+....  ..+.+.+|+.+++.+ +|+|++++++++.+....++|
T Consensus         7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   84 (298)
T 1csn_A            7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   84 (298)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence            4456899999999999999999996 468899999886432  334578899999999 799999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC-----ceEeeccc
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-----PKLSDFGL  335 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~-----vkL~DFGl  335 (521)
                      |||+ +++|.+++...   ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.     +||+|||+
T Consensus        85 ~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           85 IDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             EEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            9999 89999999865   34699999999999999999999998   9999999999999987766     99999999


Q ss_pred             ceecCCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          336 AKLLGAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       336 a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      ++........      ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  237 (298)
T 1csn_A          158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK  237 (298)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence            9976543221      2345679999999999999999999999999999999999999998765443333332222211


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ......     .+. ..++.   .+.+++.+||+.||++||++.+|++.|+..
T Consensus       238 ~~~~~~-----~~~-~~~~~---~l~~li~~~l~~dp~~RP~~~~l~~~l~~~  281 (298)
T 1csn_A          238 QSTPLR-----ELC-AGFPE---EFYKYMHYARNLAFDATPDYDYLQGLFSKV  281 (298)
T ss_dssp             HHSCHH-----HHT-TTSCH---HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             cCccHH-----HHH-hhCcH---HHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence            111000     000 11233   445588899999999999999999999864


No 76 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=372.52  Aligned_cols=253  Identities=20%  Similarity=0.275  Sum_probs=203.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||+||+|... +++.||+|++.....  ...+.+.+|+++++.++||||+++++++.++...|+||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            347899999999999999999965 688899999876542  33467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC---CCCCceEeeccccee
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKL  338 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~---~~~~vkL~DFGla~~  338 (521)
                      ||+++|+|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++   +++.+||+|||+++.
T Consensus        90 E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           90 DLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             CCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999999865    5699999999999999999999999   999999999999998   567899999999987


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||....      ..+........ .. ...
T Consensus       163 ~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~-~~-~~~  233 (444)
T 3soa_A          163 VEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED------QHRLYQQIKAG-AY-DFP  233 (444)
T ss_dssp             CCTTC-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHT-CC-CCC
T ss_pred             ecCCC-ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhC-CC-CCC
Confidence            64432 22345679999999999999999999999999999999999999996432      12222222221 11 111


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .+..  ...+.   .+.+++.+||+.||++|||+.|++++
T Consensus       234 ~~~~--~~~s~---~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          234 SPEW--DTVTP---EAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             TTTT--TTSCH---HHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccc--ccCCH---HHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            1111  11233   34458889999999999999999864


No 77 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.3e-43  Score=350.55  Aligned_cols=254  Identities=28%  Similarity=0.557  Sum_probs=203.4

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhh-------HHHHHHHHHHHhcCCCCCeeeEEEEEeeC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQA-------EKEFKVEVEAIGRVRHKNLVRLLGYCAEG  254 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~Ei~~l~~l~hpniv~l~~~~~~~  254 (521)
                      +..++|++.+.||+|+||.||+|.+. +++.||+|++.......       .+.+.+|+++++.++||||+++++++.+.
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   95 (287)
T 4f0f_A           16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP   95 (287)
T ss_dssp             CCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred             hhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence            34578999999999999999999975 68899999986543221       16788999999999999999999999766


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEeCCCCC-----
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK--VVHRDIKSSNILLDKQWN-----  327 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~--iiHrDik~~NILl~~~~~-----  327 (521)
                      .  ++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.     
T Consensus        96 ~--~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~  167 (287)
T 4f0f_A           96 P--RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVC  167 (287)
T ss_dssp             T--EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred             C--eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCcee
Confidence            5  7999999999999988765   35799999999999999999999998   8  999999999999988776     


Q ss_pred             ceEeecccceecCCCCcceeecccccccccccccc--cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          328 PKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA--STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       328 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                      +||+|||+++....    ......||+.|+|||++  ....++.++|||||||++|||++|+.||......    .....
T Consensus       168 ~kl~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~  239 (287)
T 4f0f_A          168 AKVADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG----KIKFI  239 (287)
T ss_dssp             EEECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCC----HHHHH
T ss_pred             EEeCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccccc----HHHHH
Confidence            99999999985432    23456799999999998  4556889999999999999999999999754432    11112


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      .......     ..+.+.. .++..   +.+++.+||+.||++|||+.++++.|+.
T Consensus       240 ~~~~~~~-----~~~~~~~-~~~~~---l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          240 NMIREEG-----LRPTIPE-DCPPR---LRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHSC-----CCCCCCT-TSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHhccC-----CCCCCCc-ccCHH---HHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            2222111     1111211 13333   4458889999999999999999999975


No 78 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.3e-43  Score=352.78  Aligned_cols=249  Identities=24%  Similarity=0.376  Sum_probs=195.5

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh--------------------------hHHHHHHHHHHHh
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ--------------------------AEKEFKVEVEAIG  237 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~Ei~~l~  237 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||||++......                          ..+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            468999999999999999999975 5788999998654311                          1356888999999


Q ss_pred             cCCCCCeeeEEEEEee--CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 009979          238 RVRHKNLVRLLGYCAE--GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDI  315 (521)
Q Consensus       238 ~l~hpniv~l~~~~~~--~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDi  315 (521)
                      .++||||+++++++.+  ....++||||+++++|.+++..     ..+++..++.++.|++.||+|||+.   +|+||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl  163 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI  163 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence            9999999999999986  5688999999999999886543     4789999999999999999999999   9999999


Q ss_pred             CCCCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccCCC---CCCcccchhHHHHHHHHHhCCCCCCC
Q 009979          316 KSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGM---LNERSDVYSFGILIMEVISGRNPVDY  392 (521)
Q Consensus       316 k~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~Pf~~  392 (521)
                      ||+|||++.++.+||+|||+++....... ......||+.|+|||.+.+..   ++.++|||||||++|||++|+.||..
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            99999999999999999999987654332 234567999999999997655   47789999999999999999999964


Q ss_pred             CCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          393 SRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ..      .......... ....   .+.  ....+..   +.+++.+||+.||++||++.|+++
T Consensus       243 ~~------~~~~~~~~~~-~~~~---~~~--~~~~~~~---l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          243 ER------IMCLHSKIKS-QALE---FPD--QPDIAED---LKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SS------HHHHHHHHHH-CCCC---CCS--SSCCCHH---HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cc------HHHHHHHHhc-ccCC---CCC--ccccCHH---HHHHHHHHhhcChhhCCCHHHHhc
Confidence            32      2222222221 1110   010  1112333   445888999999999999999874


No 79 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=1.6e-43  Score=350.54  Aligned_cols=261  Identities=21%  Similarity=0.336  Sum_probs=199.4

Q ss_pred             CCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQ--AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ++|++.+.||+|+||+||+|...+++.||+|++......  ..+.+.+|+++++.++||||+++++++.+....++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            578999999999999999999988999999998654332  236788999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      +++ +|.+++...   ...+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (288)
T ss_dssp             CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence            975 999998765   35789999999999999999999999   99999999999999999999999999998764322


Q ss_pred             cceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc-------
Q 009979          344 SYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE-------  415 (521)
Q Consensus       344 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-------  415 (521)
                       .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....   ......+..........       
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T 1ob3_A          155 -RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTE  230 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHHCCCChhhchhhhc
Confidence             22334578999999999865 4589999999999999999999999964321   11111111111110000       


Q ss_pred             -cCCCcccCCC-------ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          416 -GVLDPRLQEK-------PCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       416 -~~~d~~l~~~-------~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                       ...++.+...       ........+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             0111111100       00112234456888999999999999999985


No 80 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=376.43  Aligned_cols=265  Identities=22%  Similarity=0.249  Sum_probs=211.5

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEe
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCA  252 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~  252 (521)
                      .+++.++..++|++.+.||+|+||.||+|+.. +++.||+|++.+..   ....+.+..|+.++..++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            46677788899999999999999999999975 68899999986532   122345788999999999999999999999


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEee
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD  332 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~D  332 (521)
                      +....||||||+++|+|.+++.+.   ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D  205 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD  205 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence            999999999999999999999764   24789999999999999999999998   999999999999999999999999


Q ss_pred             cccceecCCCCcceeeccccccccccccccc-------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYAS-------TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       333 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                      ||+++.............+||+.|+|||++.       +..++.++|||||||++|||++|+.||....      ..+..
T Consensus       206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~  279 (412)
T 2vd5_A          206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS------TAETY  279 (412)
T ss_dssp             CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHH
T ss_pred             chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC------HHHHH
Confidence            9999987554443444568999999999986       4678999999999999999999999996432      22222


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCC---CCHHHHHHHhh
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKR---PKMGHVIHMLE  460 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~R---Pt~~evl~~L~  460 (521)
                      ........  ....+.+. ...+.   ++.+++.+||. +|.+|   |++.|++++--
T Consensus       280 ~~i~~~~~--~~~~p~~~-~~~s~---~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          280 GKIVHYKE--HLSLPLVD-EGVPE---EARDFIQRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             HHHHTHHH--HCCCC-----CCCH---HHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             HHHHhccc--CcCCCccc-cCCCH---HHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence            22222110  00011111 11233   34458889999 99998   68999976543


No 81 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.4e-43  Score=356.44  Aligned_cols=248  Identities=25%  Similarity=0.328  Sum_probs=205.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|++.+.||+|+||.||+|+.. +++.||+|.+.+..   ....+.+..|+.+++.++||||+++++++.+....|+|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            457899999999999999999976 68899999986542   23346788899999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++|+|.+++...    ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++...
T Consensus        85 ~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~  157 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP  157 (318)
T ss_dssp             ECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred             EeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence            9999999999999865    4689999999999999999999998   99999999999999999999999999998754


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ..    ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........       .
T Consensus       158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~-------~  220 (318)
T 1fot_A          158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKILNAE-------L  220 (318)
T ss_dssp             SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHCC-------C
T ss_pred             Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCC-------C
Confidence            32    234689999999999999999999999999999999999999996432      222333333221       0


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHMLE  460 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~  460 (521)
                      .+.. ..+.   .+.+++.+||+.||++||     ++.+++++--
T Consensus       221 ~~p~-~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~  261 (318)
T 1fot_A          221 RFPP-FFNE---DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW  261 (318)
T ss_dssp             CCCT-TSCH---HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             CCCC-CCCH---HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence            1111 1233   344588899999999999     8899885543


No 82 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=3.2e-44  Score=363.82  Aligned_cols=246  Identities=23%  Similarity=0.347  Sum_probs=201.4

Q ss_pred             CCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|.+.+.||+|+||.||+|.+ .+++.||+|++....   ......+.+|+.+++.++||||+++++++......++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35899999999999999999997 468899999986432   22235788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+ +|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||++....
T Consensus        88 ~E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             ECCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             EECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            9999 67999998765    4689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...  .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..........               .+..
T Consensus       160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~---------------~i~~  222 (336)
T 3h4j_B          160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK---------------KVNS  222 (336)
T ss_dssp             TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------CCCS
T ss_pred             CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------HHHc
Confidence            332  2344679999999999988776 789999999999999999999997543322110               0000


Q ss_pred             ccc-CCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRL-QEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l-~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ... .+...+.   .+.+++.+||+.||.+|||+.|++++
T Consensus       223 ~~~~~p~~~s~---~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          223 CVYVMPDFLSP---GAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             SCCCCCTTSCH---HHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             CCCCCcccCCH---HHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            000 0111233   34458889999999999999999753


No 83 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.4e-44  Score=365.43  Aligned_cols=267  Identities=26%  Similarity=0.408  Sum_probs=211.3

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEEEEE
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLLGYC  251 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~  251 (521)
                      ++++..++|.+.+.||+|+||.||+|.+.      ++..||+|.+.... ....+.+.+|+.+++++ +||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            35667789999999999999999999962      35579999987542 33447789999999999 899999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeee
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVGP-------------------HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVH  312 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiH  312 (521)
                      ......++||||+++|+|.+++......                   ...+++..++.++.|++.||+|||+.   +|+|
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH  195 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH  195 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence            9999999999999999999999865321                   13489999999999999999999998   9999


Q ss_pred             cCCCCCCeEeCCCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCC
Q 009979          313 RDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPV  390 (521)
Q Consensus       313 rDik~~NILl~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf  390 (521)
                      |||||+|||++.++.+||+|||++......... ......||+.|+|||.+.+..++.++|||||||++|||+| |..||
T Consensus       196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  275 (344)
T 1rjb_A          196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  275 (344)
T ss_dssp             TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence            999999999999999999999999876443322 2334568899999999999999999999999999999998 99999


Q ss_pred             CCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          391 DYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                      .......  .    +........     .+... ..++.   .+.+++.+||+.||.+||++.+++++|+....
T Consensus       276 ~~~~~~~--~----~~~~~~~~~-----~~~~~-~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          276 PGIPVDA--N----FYKLIQNGF-----KMDQP-FYATE---EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             TTCCCSH--H----HHHHHHTTC-----CCCCC-TTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ccCCcHH--H----HHHHHhcCC-----CCCCC-CCCCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            7553221  1    112222111     11111 11333   34458889999999999999999999987543


No 84 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=1.2e-43  Score=361.17  Aligned_cols=256  Identities=24%  Similarity=0.325  Sum_probs=203.3

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~l  259 (521)
                      .++|++.+.||+|+||.||+|++. +++.||+|++.+..   ....+.+..|+.++..+ +||||+++++++.+....|+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            457899999999999999999976 57889999997542   33446688899999988 89999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++..
T Consensus        88 v~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             EECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            99999999999999764    4689999999999999999999999   9999999999999999999999999999864


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcc--cHHHHHHHHhhccccccC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV--NLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~  417 (521)
                      ... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.........  .....+...+.....   
T Consensus       161 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~---  236 (345)
T 3a8x_A          161 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI---  236 (345)
T ss_dssp             CCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC---
T ss_pred             cCC-CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC---
Confidence            322 22344568999999999999999999999999999999999999999753221111  111122222221111   


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM------GHVIHM  458 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~------~evl~~  458 (521)
                         .+.. ..+.   .+.+++.+||+.||++||++      .+++.+
T Consensus       237 ---~~p~-~~s~---~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          237 ---RIPR-SLSV---KAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             ---CCCT-TSCH---HHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             ---CCCC-CCCH---HHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence               1111 1223   34458889999999999995      566543


No 85 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=3.2e-44  Score=359.14  Aligned_cols=265  Identities=25%  Similarity=0.414  Sum_probs=213.3

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEE------cCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcC-CCCCeeeEEEEE
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRV-RHKNLVRLLGYC  251 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~hpniv~l~~~~  251 (521)
                      .+++..++|++.+.||+|+||.||+|.+      .++..||+|.+..... ...+.+.+|+++++++ +||||+++++++
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~   96 (313)
T 1t46_A           17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (313)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE
Confidence            3566778999999999999999999985      2467899999975533 3457789999999999 899999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVG--------------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKS  317 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~  317 (521)
                      .++...++||||+++|+|.+++.....              ....+++..++.++.|++.||+|||++   +|+||||||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp  173 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA  173 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence            999999999999999999999986532              123589999999999999999999999   999999999


Q ss_pred             CCeEeCCCCCceEeecccceecCCCCcce-eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCC
Q 009979          318 SNILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRP  395 (521)
Q Consensus       318 ~NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~  395 (521)
                      +|||++.++.+||+|||+++......... .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus       174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             GGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             ceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence            99999999999999999998775443322 234567889999999999999999999999999999999 9999975432


Q ss_pred             CCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          396 PGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .  ...    ........     .+. .....+.   .+.+++.+||+.||.+|||+.+++++|+..
T Consensus       254 ~--~~~----~~~~~~~~-----~~~-~~~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~  305 (313)
T 1t46_A          254 D--SKF----YKMIKEGF-----RML-SPEHAPA---EMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (313)
T ss_dssp             S--HHH----HHHHHHTC-----CCC-CCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             h--hHH----HHHhccCC-----CCC-CcccCCH---HHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence            2  111    11111110     111 1112333   345588899999999999999999999753


No 86 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=1.5e-43  Score=356.85  Aligned_cols=251  Identities=21%  Similarity=0.394  Sum_probs=198.9

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC--------
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA--------  255 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~--------  255 (521)
                      ++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++|++++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            36889999999999999999986 78999999996543 334578999999999999999999999986543        


Q ss_pred             -------------------------------------------------eeeEEEEeccCCchHHhhhcCCCCCCCCCHH
Q 009979          256 -------------------------------------------------HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWE  286 (521)
Q Consensus       256 -------------------------------------------------~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~  286 (521)
                                                                       ..++|||||++|+|.+++.... .....++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~  164 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREHG  164 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-CccchhhH
Confidence                                                             3789999999999999998753 23456777


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCc-----------ceeeccccccc
Q 009979          287 IRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERS-----------YVTTRVMGTFG  355 (521)
Q Consensus       287 ~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~-----------~~~~~~~gt~~  355 (521)
                      .++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++.......           .......||+.
T Consensus       165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  241 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL  241 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred             HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence            8899999999999999998   999999999999999999999999999998754321           12234579999


Q ss_pred             ccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHH
Q 009979          356 YVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRAL  435 (521)
Q Consensus       356 y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~  435 (521)
                      |+|||++.+..++.++|||||||++|||++|..|+.        ........... .        .+ ..........+.
T Consensus       242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~~~~~~~~-~--------~~-~~~~~~~~~~~~  303 (332)
T 3qd2_B          242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVRIITDVRN-L--------KF-PLLFTQKYPQEH  303 (332)
T ss_dssp             GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHHHHHHHHT-T--------CC-CHHHHHHCHHHH
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHHHHHHhhc-c--------CC-CcccccCChhHH
Confidence            999999999999999999999999999999877642        11111111111 0        00 111223334556


Q ss_pred             HHHHhccCCCCCCCCCHHHHHHH
Q 009979          436 LVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       436 ~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      +++.+||+.||++|||+.|++++
T Consensus       304 ~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          304 MMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHccCCCCcCCCHHHHhhc
Confidence            68899999999999999999853


No 87 
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=4.3e-44  Score=359.19  Aligned_cols=268  Identities=25%  Similarity=0.348  Sum_probs=209.0

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee----CCe
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE----GAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~----~~~  256 (521)
                      .+..++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+++++.++||||+++++++..    ...
T Consensus        25 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           25 IIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             EETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             EECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            45567899999999999999999997 4688999999877666677889999999999999999999999862    347


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++|+|.+++.........+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~  181 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence            7899999999999999986433456899999999999999999999999   9999999999999999999999999998


Q ss_pred             eecCCCCcc--------eeecccccccccccccccCCC---CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          337 KLLGAERSY--------VTTRVMGTFGYVAPEYASTGM---LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       337 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                      .........        ......||+.|+|||++.+..   ++.++|||||||++|||++|+.||........ ....  
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~--  258 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD-SVAL--  258 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS-CHHH--
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc-hhhH--
Confidence            865321110        012345799999999987554   78999999999999999999999953211111 1111  


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCc
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFPF  466 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~  466 (521)
                        .....    ...+  .....+.   .+.+++.+||+.||.+||++.++++.|+....+.
T Consensus       259 --~~~~~----~~~~--~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~  308 (317)
T 2buj_A          259 --AVQNQ----LSIP--QSPRHSS---ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA  308 (317)
T ss_dssp             --HHHCC------CC--CCTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred             --Hhhcc----CCCC--ccccCCH---HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence              11110    0000  0111233   4455888999999999999999999998765443


No 88 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=1.9e-44  Score=366.75  Aligned_cols=251  Identities=23%  Similarity=0.333  Sum_probs=203.5

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCe
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~  256 (521)
                      .+..++|.+.+.||+|+||.||+|++. +++.||+|.+.+..   ......+..|..++..+ +||||+++++++.+...
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            345678999999999999999999976 58889999996542   23345677899999876 89999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .|+||||+++|+|.+++...    ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++++||+|||++
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a  165 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC  165 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence            99999999999999999864    4689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      +..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........    
T Consensus       166 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~----  234 (345)
T 1xjd_A          166 KENMLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIRMDN----  234 (345)
T ss_dssp             BCCCCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC----
T ss_pred             hhcccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHhCC----
Confidence            864322 222455789999999999999999999999999999999999999996432      222222222211    


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHH-HHHH
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMG-HVIH  457 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~-evl~  457 (521)
                         +.+.. ..+.   .+.+++.+||+.||++||++. ++++
T Consensus       235 ---~~~p~-~~s~---~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          235 ---PFYPR-WLEK---EAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             ---CCCCT-TSCH---HHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ---CCCCc-ccCH---HHHHHHHHHhcCCHhHcCCChHHHHc
Confidence               11111 1233   344588899999999999997 6653


No 89 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=5.9e-44  Score=359.33  Aligned_cols=266  Identities=20%  Similarity=0.387  Sum_probs=195.8

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCc----EEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNT----NVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYC  251 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~----~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~  251 (521)
                      ++++.+..++|++.+.||+|+||.||+|.+....    .||||.+...  .....+.+.+|+++++.++||||+++++++
T Consensus        15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            4556678889999999999999999999865332    7999998654  334457889999999999999999999999


Q ss_pred             eeCCee------eEEEEeccCCchHHhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC
Q 009979          252 AEGAHR------MLVYEYIDNGNLEQWLHGDV--GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD  323 (521)
Q Consensus       252 ~~~~~~------~lV~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~  323 (521)
                      ......      ++||||+++|+|.+++....  .....+++..++.++.|++.||+|||+.   +|+||||||+|||++
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~  171 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLA  171 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEc
Confidence            877655      89999999999999986532  1223689999999999999999999999   999999999999999


Q ss_pred             CCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccH
Q 009979          324 KQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNL  401 (521)
Q Consensus       324 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~  401 (521)
                      +++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||......   ..
T Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~  248 (323)
T 3qup_A          172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---EI  248 (323)
T ss_dssp             TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GH
T ss_pred             CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---HH
Confidence            9999999999999876443222 2233457889999999999999999999999999999999 99999754322   11


Q ss_pred             HHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          402 VEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       402 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                         .........      ... ....+.   .+.+++.+||+.||++|||+.++++.|+..
T Consensus       249 ---~~~~~~~~~------~~~-~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  296 (323)
T 3qup_A          249 ---YNYLIGGNR------LKQ-PPECME---EVYDLMYQCWSADPKQRPSFTCLRMELENI  296 (323)
T ss_dssp             ---HHHHHTTCC------CCC-CTTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---HHHHhcCCC------CCC-CCccCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence               122221111      001 111233   455588899999999999999999999864


No 90 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=1.5e-43  Score=357.70  Aligned_cols=254  Identities=25%  Similarity=0.319  Sum_probs=197.4

Q ss_pred             cCCCccccceEccCCcEEEEEEEE----cCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL----EDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      ..++|++.+.||+|+||.||+|+.    .+++.||+|++.+..    ......+..|+++|+.++||||+++++++....
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence            446899999999999999999997    468899999987642    223456788999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..|+||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCc
Confidence            999999999999999999764    4688999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ++...... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.+........  
T Consensus       168 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~--  238 (327)
T 3a62_A          168 CKESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILKCKL--  238 (327)
T ss_dssp             C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCC--
T ss_pred             ccccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCC--
Confidence            98643222 22345679999999999999999999999999999999999999996432      2222233222110  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhcc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHMLEAE  462 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~  462 (521)
                           .+.. ..+.   .+.+++.+||+.||++||     ++.+++++---.
T Consensus       239 -----~~p~-~~~~---~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~  281 (327)
T 3a62_A          239 -----NLPP-YLTQ---EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR  281 (327)
T ss_dssp             -----CCCT-TSCH---HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred             -----CCCC-CCCH---HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence                 1111 1233   344588899999999999     788887654433


No 91 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=4.3e-44  Score=361.54  Aligned_cols=257  Identities=26%  Similarity=0.457  Sum_probs=199.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcE----EEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTN----VAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ..++|++.+.||+|+||+||+|.+. +++.    ||+|.+.... ....+.+.+|+.++++++||||++++++|.++. .
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~   91 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence            3457999999999999999999964 3443    5788775432 344578999999999999999999999998755 7


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+.+|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++
T Consensus        92 ~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~  165 (327)
T 3poz_A           92 QLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred             EEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence            8999999999999999875   35789999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          338 LLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       338 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||......   .....    +..... 
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~----~~~~~~-  237 (327)
T 3poz_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSI----LEKGER-  237 (327)
T ss_dssp             HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHH----HHTTCC-
T ss_pred             EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH---HHHHH----HHcCCC-
Confidence            77543322 2234567889999999999999999999999999999999 99999754322   22221    111110 


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                          .. ....++.   .+..++.+||+.||++||++.+++++|+...
T Consensus       238 ----~~-~~~~~~~---~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          238 ----LP-QPPICTI---DVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             ----CC-CCTTBCH---HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             ----CC-CCccCCH---HHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                00 1111333   4555888999999999999999999998643


No 92 
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=2.2e-43  Score=354.89  Aligned_cols=276  Identities=24%  Similarity=0.423  Sum_probs=219.7

Q ss_pred             cccchhhhhhcCCCccccceEccCCcEEEEEEEEc------CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCeee
Q 009979          174 HWYTLRELEVSTNGFADENVIGEGGYGIVYHGVLE------DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVR  246 (521)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~hpniv~  246 (521)
                      ..+...++++..++|++.+.||+|+||.||+|.+.      ++..||+|.+..... .....+.+|+++++.++||||++
T Consensus        13 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   92 (322)
T 1p4o_A           13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR   92 (322)
T ss_dssp             SCCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             cccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEee
Confidence            33556677888899999999999999999999864      367899999875433 34467889999999999999999


Q ss_pred             EEEEEeeCCeeeEEEEeccCCchHHhhhcCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 009979          247 LLGYCAEGAHRMLVYEYIDNGNLEQWLHGDV------GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNI  320 (521)
Q Consensus       247 l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NI  320 (521)
                      +++++.+....++||||+++|+|.+++....      .....+++..++.++.|++.||+|||++   +|+||||||+||
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI  169 (322)
T 1p4o_A           93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC  169 (322)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred             eEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence            9999999999999999999999999997531      1124678999999999999999999999   999999999999


Q ss_pred             EeCCCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCc
Q 009979          321 LLDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGE  398 (521)
Q Consensus       321 Ll~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~  398 (521)
                      |++.++.+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++ |..||....    
T Consensus       170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----  245 (322)
T 1p4o_A          170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS----  245 (322)
T ss_dssp             EECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----
T ss_pred             EEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC----
Confidence            9999999999999999865433221 1233467899999999999999999999999999999999 899996432    


Q ss_pred             ccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCCchh
Q 009979          399 VNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFPFRD  468 (521)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~  468 (521)
                        ..+........ ..   .+  . ...++..   +.+++.+||+.||.+|||+.++++.|+....+...
T Consensus       246 --~~~~~~~~~~~-~~---~~--~-~~~~~~~---l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~  303 (322)
T 1p4o_A          246 --NEQVLRFVMEG-GL---LD--K-PDNCPDM---LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFR  303 (322)
T ss_dssp             --HHHHHHHHHTT-CC---CC--C-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHH
T ss_pred             --HHHHHHHHHcC-Cc---CC--C-CCCCCHH---HHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCc
Confidence              22222222221 11   00  1 1123333   44588899999999999999999999987665543


No 93 
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=3e-44  Score=386.53  Aligned_cols=263  Identities=27%  Similarity=0.413  Sum_probs=213.6

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ...+++..++|++.+.||+|+||.||+|.+.++..||||++.... ...+.|.+|+++|++++||||+++++++.+ ...
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            345667788899999999999999999999888889999997644 335679999999999999999999999976 678


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      +|||||+++|+|.++++...  ...+++..++.++.|++.||+|||++   +|+||||||+||||++++.+||+|||+++
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~  411 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR  411 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred             eEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence            99999999999999997531  24688999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      ..............++..|+|||++.+..++.++|||||||+||||+| |+.||....      ..+.+........   
T Consensus       412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~------~~~~~~~i~~~~~---  482 (535)
T 2h8h_A          412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERGYR---  482 (535)
T ss_dssp             TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC------HHHHHHHHHTTCC---
T ss_pred             ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCCC---
Confidence            764332222233457889999999998999999999999999999999 999996432      2222222222111   


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                         ... ...++..   +.+|+.+||+.||++|||+.+|+++|+...
T Consensus       483 ---~~~-~~~~~~~---l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          483 ---MPC-PPECPES---LHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             ---CCC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             ---CCC-CCCCCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence               001 1123444   445888999999999999999999998754


No 94 
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.3e-43  Score=349.64  Aligned_cols=263  Identities=27%  Similarity=0.473  Sum_probs=197.1

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      .++..++|++.+.||+|+||+||+|.+.  ..||+|++....  ....+.+.+|+++++.++||||+++++++. ....+
T Consensus        19 ~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~   95 (289)
T 3og7_A           19 WEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLA   95 (289)
T ss_dssp             CBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             CccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccE
Confidence            4677889999999999999999999864  359999986543  344577899999999999999999999764 45689


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        96 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  169 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATE  169 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred             EEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccc
Confidence            999999999999999765   35789999999999999999999999   999999999999999999999999999986


Q ss_pred             cCCC-Ccceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          339 LGAE-RSYVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       339 ~~~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      .... .........||+.|+|||.+.   +..++.++||||||+++|||++|+.||......      +.+.........
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~  243 (289)
T 3og7_A          170 KSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSL  243 (289)
T ss_dssp             --------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSC
T ss_pred             cccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhccccc
Confidence            5432 122234467999999999886   667888999999999999999999999654321      112222222111


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      ..... .+ ...++.   .+.+++.+||+.||.+||++.++++.|+...
T Consensus       244 ~~~~~-~~-~~~~~~---~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          244 SPDLS-KV-RSNCPK---RMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             CCCTT-SS-CTTSCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             Ccchh-hc-cccCCH---HHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            11111 01 112333   3445888999999999999999999998653


No 95 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=8.9e-44  Score=364.33  Aligned_cols=253  Identities=20%  Similarity=0.304  Sum_probs=194.8

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ..++|.+.+.||+|+||+||++... +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            4568999999999999999999976 688999999865432 33668899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC--ceEeecccceecC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN--PKLSDFGLAKLLG  340 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~--vkL~DFGla~~~~  340 (521)
                      |+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.  +||+|||+++...
T Consensus        97 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           97 YASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             eCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            99999999999764    4689999999999999999999998   9999999999999987765  9999999998532


Q ss_pred             CCCcceeecccccccccccccccCCCCCCc-ccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNER-SDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ..  .......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.......  .....+........      
T Consensus       170 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~~~~------  239 (361)
T 3uc3_A          170 LH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILSVKY------  239 (361)
T ss_dssp             -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHTTCC------
T ss_pred             cc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhcCCC------
Confidence            22  22344579999999999988777665 899999999999999999997654332  22222333222110      


Q ss_pred             cccCC-CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQE-KPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .+.. ...+.   .+.+++.+||+.||++|||+.|++++
T Consensus       240 -~~~~~~~~s~---~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          240 -SIPDDIRISP---ECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             -CCCTTSCCCH---HHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             -CCCCcCCCCH---HHHHHHHHHccCChhHCcCHHHHHhC
Confidence             0111 01223   34458889999999999999999864


No 96 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=4.7e-43  Score=347.84  Aligned_cols=263  Identities=21%  Similarity=0.314  Sum_probs=200.6

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ++|++.+.||+|+||+||+|.+. +++.||+|++....  ......+.+|++++++++||||+++++++.++...++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999976 58889999996543  2334678899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++ +|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        82 ~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred             cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence            9975 666666554   35799999999999999999999999   9999999999999999999999999999876433


Q ss_pred             CcceeecccccccccccccccCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc-----
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG-----  416 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----  416 (521)
                      . .......||+.|+|||++.+.. ++.++|||||||++|||++|..||.....  .......+...........     
T Consensus       155 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~  231 (292)
T 3o0g_A          155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMT  231 (292)
T ss_dssp             C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred             c-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhc
Confidence            2 2234467899999999987765 89999999999999999999888643221  1111121211111100000     


Q ss_pred             -CCC----cc-----cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          417 -VLD----PR-----LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       417 -~~d----~~-----l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       ..+    +.     ......+.....+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence             000    00     0000011122344568889999999999999999853


No 97 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=2.4e-43  Score=362.62  Aligned_cols=249  Identities=21%  Similarity=0.294  Sum_probs=199.0

Q ss_pred             cccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEeccCC
Q 009979          189 ADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNG  267 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~g  267 (521)
                      ...+.||+|+||.||+|... ++..||+|++........+.+.+|+++|++++||||+++++++.+....+|||||++++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            34678999999999999975 68899999998776666788999999999999999999999999999999999999999


Q ss_pred             chHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe--CCCCCceEeecccceecCCCCcc
Q 009979          268 NLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL--DKQWNPKLSDFGLAKLLGAERSY  345 (521)
Q Consensus       268 ~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl--~~~~~vkL~DFGla~~~~~~~~~  345 (521)
                      +|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||+  +.++.+||+|||+++.+..... 
T Consensus       172 ~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-  244 (373)
T 2x4f_A          172 ELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-  244 (373)
T ss_dssp             EEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred             cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence            999998754   34689999999999999999999999   99999999999999  6678899999999998754332 


Q ss_pred             eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCC
Q 009979          346 VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK  425 (521)
Q Consensus       346 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~  425 (521)
                       .....||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.+........  ...+..    
T Consensus       245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~--~~~~~~----  311 (373)
T 2x4f_A          245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETLNNILACRW--DLEDEE----  311 (373)
T ss_dssp             -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCC--CSCSGG----
T ss_pred             -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccC--CCChhh----
Confidence             234579999999999999999999999999999999999999996432      2222233222111  111111    


Q ss_pred             ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          426 PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       426 ~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .......+.+++.+||+.||.+|||+.|++++
T Consensus       312 -~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h  343 (373)
T 2x4f_A          312 -FQDISEEAKEFISKLLIKEKSWRISASEALKH  343 (373)
T ss_dssp             -GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             11122345558889999999999999999874


No 98 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3.1e-43  Score=359.64  Aligned_cols=207  Identities=24%  Similarity=0.314  Sum_probs=182.0

Q ss_pred             cchhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----CCCeeeEEE
Q 009979          176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-----HKNLVRLLG  249 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----hpniv~l~~  249 (521)
                      +++++..+..++|.+.++||+|+||+||+|.+. +++.||||++... ......+..|+++++.++     ||||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            346666777889999999999999999999974 6888999998643 334566778999999986     999999999


Q ss_pred             EEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC-----
Q 009979          250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK-----  324 (521)
Q Consensus       250 ~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~-----  324 (521)
                      ++......++||||+ +++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.     
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence            999999999999999 889999998762  34689999999999999999999998   9999999999999975     


Q ss_pred             --------------------CCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHH
Q 009979          325 --------------------QWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVI  384 (521)
Q Consensus       325 --------------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ell  384 (521)
                                          ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  253 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY  253 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence                                788999999999875432    23467999999999999999999999999999999999


Q ss_pred             hCCCCCCCC
Q 009979          385 SGRNPVDYS  393 (521)
Q Consensus       385 tG~~Pf~~~  393 (521)
                      +|+.||...
T Consensus       254 ~g~~pf~~~  262 (360)
T 3llt_A          254 TGSLLFRTH  262 (360)
T ss_dssp             HSSCSCCCS
T ss_pred             HCCCCCCCC
Confidence            999999754


No 99 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=8.8e-44  Score=362.72  Aligned_cols=249  Identities=21%  Similarity=0.251  Sum_probs=206.5

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|++.+.||+|+||.||+|++. +++.||+|++.+..   ....+.+.+|+++++.++||||+++++++.+....|+
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            3458999999999999999999976 58899999986542   2334678889999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++..
T Consensus       119 v~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceec
Confidence            99999999999999865    4689999999999999999999999   9999999999999999999999999999976


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...    ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+......... .     
T Consensus       192 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~-~-----  255 (350)
T 1rdq_E          192 KGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIVSGK-V-----  255 (350)
T ss_dssp             SSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC-C-----
T ss_pred             cCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHHcCC-C-----
Confidence            432    234679999999999999999999999999999999999999996432      223333333221 0     


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPK-----MGHVIHMLE  460 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L~  460 (521)
                       .+.. ..+.   .+.+++.+||+.||.+||+     +.+|+++--
T Consensus       256 -~~p~-~~~~---~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          256 -RFPS-HFSS---DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             -CCCT-TCCH---HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             -CCCC-CCCH---HHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence             1111 1233   3445888999999999998     888875543


No 100
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=9.7e-44  Score=351.72  Aligned_cols=255  Identities=22%  Similarity=0.351  Sum_probs=204.4

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEcC-C-------cEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLED-N-------TNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG  254 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~  254 (521)
                      +..++|.+.+.||+|+||.||+|.+.. +       ..||+|.+........+.+.+|+++++.++||||+++++++.++
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            445689999999999999999998653 3       46999999776666678899999999999999999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC-------
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-------  327 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~-------  327 (521)
                      ...++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.       
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             CCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence            9999999999999999999875   24589999999999999999999999   9999999999999988887       


Q ss_pred             -ceEeecccceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          328 -PKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       328 -vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                       +||+|||++......     ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+....     ......
T Consensus       159 ~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~  228 (289)
T 4fvq_A          159 FIKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQRKL  228 (289)
T ss_dssp             EEEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHH
T ss_pred             eeeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chHHHH
Confidence             999999999754322     23468999999999987 779999999999999999999655443221     111111


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFP  465 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  465 (521)
                      .......    .+...     .+.   .+.+++.+||+.||++|||+.++++.|+....+
T Consensus       229 ~~~~~~~----~~~~~-----~~~---~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          229 QFYEDRH----QLPAP-----KAA---ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHHHTTC----CCCCC-----SSC---TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             HHhhccC----CCCCC-----CCH---HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            1111111    11111     122   244588899999999999999999999976654


No 101
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.5e-43  Score=358.27  Aligned_cols=255  Identities=20%  Similarity=0.338  Sum_probs=199.2

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCC--CCeeeEEEEEeeCCee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRH--KNLVRLLGYCAEGAHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h--pniv~l~~~~~~~~~~  257 (521)
                      .+..++|++.+.||+|+||.||+|...+++.||||++...  .....+.+.+|+.+|+.++|  |||+++++++.++...
T Consensus         5 ~~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~   84 (343)
T 3dbq_A            5 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI   84 (343)
T ss_dssp             ESSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             eeecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEE
Confidence            4567789999999999999999999888999999998654  33345778999999999986  9999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++|||+ .+++|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||+++
T Consensus        85 ~lv~e~-~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~  155 (343)
T 3dbq_A           85 YMVMEC-GNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIAN  155 (343)
T ss_dssp             EEEECC-CSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             EEEEeC-CCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccc
Confidence            999995 578999999875    5789999999999999999999999   999999999999997 5789999999998


Q ss_pred             ecCCCCcc-eeecccccccccccccccC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          338 LLGAERSY-VTTRVMGTFGYVAPEYAST-----------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       338 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                      ........ ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||....     +....+
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~  230 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKL  230 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHH
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHH
Confidence            76443222 2345679999999999864           678999999999999999999999996332     222222


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      ........     ...+.. ..+.   .+.+++.+||+.||.+|||+.+++++.
T Consensus       231 ~~~~~~~~-----~~~~~~-~~~~---~l~~li~~~L~~dp~~Rpt~~e~l~hp  275 (343)
T 3dbq_A          231 HAIIDPNH-----EIEFPD-IPEK---DLQDVLKCCLKRDPKQRISIPELLAHP  275 (343)
T ss_dssp             HHHHCTTS-----CCCCCC-CSCH---HHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HHHhcCCc-----ccCCcc-cCCH---HHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence            22222111     111111 1223   344588899999999999999998653


No 102
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=1.5e-43  Score=360.25  Aligned_cols=269  Identities=18%  Similarity=0.231  Sum_probs=201.5

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccCChhh-----------HHHHHHHHHHHhcCCCCCeeeE
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNNRGQA-----------EKEFKVEVEAIGRVRHKNLVRL  247 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~Ei~~l~~l~hpniv~l  247 (521)
                      +..++|.+.+.||+|+||.||+|.+.    ++..||+|++.......           ...+..|+..++.++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            34578999999999999999999975    56789999987653221           1346678899999999999999


Q ss_pred             EEEEee----CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC
Q 009979          248 LGYCAE----GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD  323 (521)
Q Consensus       248 ~~~~~~----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~  323 (521)
                      ++++..    ....++||||+ +++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~  185 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG  185 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence            999987    67889999999 99999999765    3789999999999999999999999   999999999999998


Q ss_pred             CCC--CceEeecccceecCCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCC
Q 009979          324 KQW--NPKLSDFGLAKLLGAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP  395 (521)
Q Consensus       324 ~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~  395 (521)
                      .++  .+||+|||+++.+......      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~  265 (345)
T 2v62_A          186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK  265 (345)
T ss_dssp             SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred             cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence            777  9999999999876432211      11345799999999999999999999999999999999999999964221


Q ss_pred             CCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 009979          396 PGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFP  465 (521)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  465 (521)
                      . . ............. ....+.........+.   .+.+++.+||+.||++||++.+|++.|+....+
T Consensus       266 ~-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  329 (345)
T 2v62_A          266 D-P-VAVQTAKTNLLDE-LPQSVLKWAPSGSSCC---EIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP  329 (345)
T ss_dssp             C-H-HHHHHHHHHHHHT-TTHHHHHHSCTTSCCH---HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred             c-c-HHHHHHHHhhccc-ccHHHHhhccccccHH---HHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence            1 1 1111111111110 0000000011112333   345588899999999999999999999986654


No 103
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=3.5e-43  Score=355.72  Aligned_cols=263  Identities=25%  Similarity=0.445  Sum_probs=210.8

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc--------CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEEEE
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE--------DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLLGY  250 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~~~  250 (521)
                      +++..++|.+.+.||+|+||.||+|.+.        ++..||+|.+.... ....+.+..|+++++.+ +||||++++++
T Consensus        30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  109 (334)
T 2pvf_A           30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA  109 (334)
T ss_dssp             TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence            4566789999999999999999999863        46679999987543 33456788999999999 89999999999


Q ss_pred             EeeCCeeeEEEEeccCCchHHhhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 009979          251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGP------------HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSS  318 (521)
Q Consensus       251 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~  318 (521)
                      +.+....++||||+++|+|.+++......            ...+++..++.++.|++.||+|||+.   +|+||||||+
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~  186 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR  186 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccc
Confidence            99999999999999999999999865321            23589999999999999999999999   9999999999


Q ss_pred             CeEeCCCCCceEeecccceecCCCCcce-eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCC
Q 009979          319 NILLDKQWNPKLSDFGLAKLLGAERSYV-TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPP  396 (521)
Q Consensus       319 NILl~~~~~vkL~DFGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~  396 (521)
                      |||++.++.+||+|||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||....  
T Consensus       187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--  264 (334)
T 2pvf_A          187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--  264 (334)
T ss_dssp             GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--
T ss_pred             eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC--
Confidence            9999999999999999998765433222 234567889999999988899999999999999999999 999996432  


Q ss_pred             CcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          397 GEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                          ..+..........      .... ..++..   +.+++.+||+.||.+||++.++++.|+..
T Consensus       265 ----~~~~~~~~~~~~~------~~~~-~~~~~~---l~~li~~~l~~dp~~Rps~~ell~~L~~l  316 (334)
T 2pvf_A          265 ----VEELFKLLKEGHR------MDKP-ANCTNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRI  316 (334)
T ss_dssp             ----HHHHHHHHHHTCC------CCCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----HHHHHHHHhcCCC------CCCC-ccCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence                2222222221110      0111 123333   44588899999999999999999999864


No 104
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.2e-43  Score=343.19  Aligned_cols=254  Identities=19%  Similarity=0.316  Sum_probs=205.8

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC--Cee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG--AHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~--~~~  257 (521)
                      .+..++|.+.+.||+|+||.||+|.+. ++.||+|++....  ....+.+.+|+.+++.++||||+++++++.+.  ...
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSC
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCe
Confidence            345568999999999999999999985 8889999987543  34456799999999999999999999999877  778


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEeCCCCCceEeeccc
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK--VVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~--iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ++||||+++|+|.+++....  ...+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.++|+|||+
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~  159 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADV  159 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGS
T ss_pred             EeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccc
Confidence            99999999999999998752  34689999999999999999999998   7  99999999999999999999999998


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCC---cccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNE---RSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      +....      .....||+.|+|||.+.+..++.   ++|||||||++|||++|+.||....      ..+.........
T Consensus       160 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~  227 (271)
T 3kmu_A          160 KFSFQ------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS------NMEIGMKVALEG  227 (271)
T ss_dssp             CCTTS------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC------HHHHHHHHHHSC
T ss_pred             eeeec------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC------hHHHHHHHHhcC
Confidence            76432      22346899999999998766555   7999999999999999999996432      222222222221


Q ss_pred             ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          413 NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       413 ~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .     .+.+.. ..+..   +.+++.+||+.||++|||+.++++.|+..
T Consensus       228 ~-----~~~~~~-~~~~~---~~~li~~~l~~~p~~Rps~~~il~~L~~l  268 (271)
T 3kmu_A          228 L-----RPTIPP-GISPH---VSKLMKICMNEDPAKRPKFDMIVPILEKM  268 (271)
T ss_dssp             C-----CCCCCT-TCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C-----CCCCCC-CCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence            1     111111 13333   44588899999999999999999999864


No 105
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=8.7e-43  Score=348.73  Aligned_cols=261  Identities=23%  Similarity=0.356  Sum_probs=198.5

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|++.+.||+|+||.||+|... ++..||+|++...   .......+.+|+.+++.++||||+++++++.+....++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            357999999999999999999974 6889999998653   234456788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++.........+++..++.++.|++.||.|||+.   +++||||||+|||++.++.+||+|||++....
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999975332346789999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....    +.......... ...     +
T Consensus       188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~-~~~-----~  256 (310)
T 2wqm_A          188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKIEQ-CDY-----P  256 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHHHHHT-TCS-----C
T ss_pred             CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHHHhhc-ccC-----C
Confidence            332 223345789999999999999999999999999999999999999964321    22222222221 111     1


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .......+..   +.+++.+||+.||++||++.+|++.|+..
T Consensus       257 ~~~~~~~~~~---l~~li~~~l~~dp~~Rps~~~il~~l~~l  295 (310)
T 2wqm_A          257 PLPSDHYSEE---LRQLVNMCINPDPEKRPDVTYVYDVAKRM  295 (310)
T ss_dssp             CCCTTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCcccccCHH---HHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            1111223333   44588899999999999999999999764


No 106
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=2.7e-43  Score=350.73  Aligned_cols=263  Identities=24%  Similarity=0.405  Sum_probs=205.8

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-----cCCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC--C
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG--A  255 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~--~  255 (521)
                      ..+.|++.+.||+|+||.||+|.+     .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.  .
T Consensus        19 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           19 EKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN   98 (302)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred             hhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence            345689999999999999999984     357889999987543 33447789999999999999999999999876  5


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~  172 (302)
T 4e5w_A           99 GIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL  172 (302)
T ss_dssp             CEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred             eEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence            689999999999999999665   35689999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC--------CCCCcccHHHHH
Q 009979          336 AKLLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS--------RPPGEVNLVEWL  405 (521)
Q Consensus       336 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~--------~~~~~~~~~~~~  405 (521)
                      +.........  ......||..|+|||.+.+..++.++||||||+++|||+||..|+...        .+.........+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  252 (302)
T 4e5w_A          173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL  252 (302)
T ss_dssp             CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred             cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence            9987544332  233456889999999999999999999999999999999999986422        011111112222


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      .........     .... ...+.   .+.+++.+||+.||.+|||+.++++.|+.
T Consensus       253 ~~~~~~~~~-----~~~~-~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~~L~~  299 (302)
T 4e5w_A          253 VNTLKEGKR-----LPCP-PNCPD---EVYQLMRKCWEFQPSNRTSFQNLIEGFEA  299 (302)
T ss_dssp             HHHHHTTCC-----CCCC-TTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhccCC-----CCCC-CCCCH---HHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            222221110     0111 11233   34558889999999999999999999975


No 107
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=6.3e-43  Score=356.70  Aligned_cols=252  Identities=21%  Similarity=0.288  Sum_probs=204.3

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEcC-CcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~  257 (521)
                      +..++|++.+.||+|+||.||+|.... ++.||+|++.+..   ....+.+..|..++..+ +||||+++++++.+....
T Consensus        17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            345689999999999999999999864 7789999986542   23346678899999988 799999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      |+||||++||+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++
T Consensus        97 ~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK  169 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence            9999999999999999864    4689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      ..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........     
T Consensus       170 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~~~-----  237 (353)
T 2i0e_A          170 ENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHN-----  237 (353)
T ss_dssp             CCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCC-----
T ss_pred             ccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCC-----
Confidence            64322 223445789999999999999999999999999999999999999996432      223333333211     


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHh
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPK-----MGHVIHML  459 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt-----~~evl~~L  459 (521)
                        ..+.. ..+   ..+.+++.+||+.||.+||+     +.+++++-
T Consensus       238 --~~~p~-~~s---~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~  278 (353)
T 2i0e_A          238 --VAYPK-SMS---KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA  278 (353)
T ss_dssp             --CCCCT-TSC---HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred             --CCCCC-CCC---HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence              01111 122   34455888999999999995     57776543


No 108
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=1.1e-43  Score=350.14  Aligned_cols=258  Identities=24%  Similarity=0.424  Sum_probs=204.0

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcC----CcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLED----NTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      .+..++|.+.+.||+|+||.||+|.+.+    +..||+|.+... .....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~   86 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP   86 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence            4456789999999999999999998643    235999998765 33455778999999999999999999999875 45


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++...   ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++
T Consensus        87 ~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  160 (281)
T 3cc6_A           87 TWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS  160 (281)
T ss_dssp             CEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred             CEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence            68999999999999999765   35689999999999999999999998   9999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......   .....+..   ...  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~---~~~~~~~~---~~~--  232 (281)
T 3cc6_A          161 RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK---DVIGVLEK---GDR--  232 (281)
T ss_dssp             GCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG---GHHHHHHH---TCC--
T ss_pred             cccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH---HHHHHHhc---CCC--
Confidence            8765444333444567889999999998999999999999999999998 99999754322   22221111   110  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                       .   . ....++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       233 -~---~-~~~~~~~~---l~~li~~~l~~~p~~Rps~~ell~~L~~~  271 (281)
T 3cc6_A          233 -L---P-KPDLCPPV---LYTLMTRCWDYDPSDRPRFTELVCSLSDV  271 (281)
T ss_dssp             -C---C-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -C---C-CCCCCCHH---HHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence             0   0 11113333   44588899999999999999999999753


No 109
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=5.7e-43  Score=361.79  Aligned_cols=206  Identities=19%  Similarity=0.231  Sum_probs=179.1

Q ss_pred             cCCCccccceEccC--CcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          184 STNGFADENVIGEG--GYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       184 ~~~~~~~~~~LG~G--~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ..++|++.+.||+|  +||.||+|.+. +++.||||++....  ....+.+.+|+.+++.++||||+++++++.++...+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34589999999999  99999999976 68899999996543  334567888999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +|||||++|+|.+++....  ...+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++..
T Consensus       103 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~  177 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS  177 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence            9999999999999998652  35689999999999999999999999   999999999999999999999999999875


Q ss_pred             cCCCCc------ceeecccccccccccccccC--CCCCCcccchhHHHHHHHHHhCCCCCCCCC
Q 009979          339 LGAERS------YVTTRVMGTFGYVAPEYAST--GMLNERSDVYSFGILIMEVISGRNPVDYSR  394 (521)
Q Consensus       339 ~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~  394 (521)
                      ......      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||....
T Consensus       178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  241 (389)
T 3gni_B          178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP  241 (389)
T ss_dssp             CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence            422111      11223478999999999987  679999999999999999999999997644


No 110
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.5e-43  Score=357.40  Aligned_cols=249  Identities=23%  Similarity=0.345  Sum_probs=179.9

Q ss_pred             cceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCCeeeEEEEeccCCc
Q 009979          191 ENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYIDNGN  268 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~~~g~  268 (521)
                      .+.||+|+||.||+|.+. +++.||||++...   ....+..|+.+++.+. ||||+++++++.++...|+||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            378999999999999976 5889999998643   3466778999999997 9999999999999999999999999999


Q ss_pred             hHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC---CceEeecccceecCCCCcc
Q 009979          269 LEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW---NPKLSDFGLAKLLGAERSY  345 (521)
Q Consensus       269 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~---~vkL~DFGla~~~~~~~~~  345 (521)
                      |.+++...    ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++   .+||+|||+++...... .
T Consensus        93 L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~  164 (325)
T 3kn6_A           93 LFERIKKK----KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-Q  164 (325)
T ss_dssp             HHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred             HHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-C
Confidence            99999875    5799999999999999999999999   999999999999997665   79999999998764432 2


Q ss_pred             eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCc-ccHHHHHHHHhhccccccCCCcccCC
Q 009979          346 VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGE-VNLVEWLKTMVTNRNAEGVLDPRLQE  424 (521)
Q Consensus       346 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~  424 (521)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+.+..... ...      .+..
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~------~~~~  237 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDF------SFEG  237 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT-TCC------CCCS
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc-CCC------CCCc
Confidence            23456789999999999999999999999999999999999999976543221 222232332222 111      1111


Q ss_pred             CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          425 KPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       425 ~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .........+.+++.+||+.||++|||+.++++
T Consensus       238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            111122344556888999999999999999863


No 111
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.8e-42  Score=350.13  Aligned_cols=266  Identities=26%  Similarity=0.398  Sum_probs=202.2

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcC--CCCCeeeEEEEEeeC----Ce
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV--RHKNLVRLLGYCAEG----AH  256 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l--~hpniv~l~~~~~~~----~~  256 (521)
                      ...++|++.+.||+|+||.||+|.+. ++.||||++...   ....+..|.+++..+  +||||+++++++...    ..
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  109 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ  109 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence            34468999999999999999999985 889999998543   233445566666554  899999999999887    67


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeEeCCCCCceEe
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-----EPKVVHRDIKSSNILLDKQWNPKLS  331 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-----~~~iiHrDik~~NILl~~~~~vkL~  331 (521)
                      .++||||+++|+|.++++..     .+++..++.++.|++.||+|||+..     .++|+||||||+|||++.++.+||+
T Consensus       110 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             eEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence            89999999999999999754     6899999999999999999999751     3489999999999999999999999


Q ss_pred             ecccceecCCCCcce---eecccccccccccccccCCCCCCc------ccchhHHHHHHHHHhC----------CCCCCC
Q 009979          332 DFGLAKLLGAERSYV---TTRVMGTFGYVAPEYASTGMLNER------SDVYSFGILIMEVISG----------RNPVDY  392 (521)
Q Consensus       332 DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------sDvwS~Gvvl~elltG----------~~Pf~~  392 (521)
                      |||+++.+.......   .....||+.|+|||++.+..++.+      +|||||||++|||+||          ..||..
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence            999998764432221   124579999999999988777765      9999999999999999          666654


Q ss_pred             CCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          393 SRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ..+... . ....................+.   .......+.+++.+||+.||++|||+.+|++.|+..
T Consensus       265 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l  329 (337)
T 3mdy_A          265 LVPSDP-S-YEDMREIVCIKKLRPSFPNRWS---SDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM  329 (337)
T ss_dssp             TSCSSC-C-HHHHHHHHTTSCCCCCCCGGGG---GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hcCCCC-c-hhhhHHHHhhhccCccccccch---hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence            433221 1 1222222222211111111111   124455566788999999999999999999999853


No 112
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=8.9e-43  Score=348.99  Aligned_cols=258  Identities=21%  Similarity=0.282  Sum_probs=198.2

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||+|++.....   ...+.+.+|+.+++.++||||+++++++..+...++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            358999999999999999999976 688899999865432   2346788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus       113 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            9999999999999865    4689999999999999999999999   99999999999999999999999999998765


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ...........||+.|+|||++.+..++.++||||||+++|||++|+.||.....       ..+.......    ...+
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~----~~~~  254 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQA----IPRP  254 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSC----CCCG
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccC----CCCc
Confidence            4433334456799999999999999999999999999999999999999964321       1122222211    1111


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhccC
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRP-KMGHVIHMLEAEE  463 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-t~~evl~~L~~~~  463 (521)
                      .......+..   +.+++.+||+.||++|| ++.++++.|+...
T Consensus       255 ~~~~~~~~~~---l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          255 STVRPGIPVA---FDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             GGTSTTCCTH---HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             cccCCCCCHH---HHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            1111123333   44488899999999999 9999999998654


No 113
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.7e-43  Score=354.53  Aligned_cols=254  Identities=25%  Similarity=0.392  Sum_probs=194.0

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe---
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH---  256 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~---  256 (521)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++....   ......+.+|+++++.++||||+++++++.....   
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            346899999999999999999997 468899999997643   2334678899999999999999999999876543   


Q ss_pred             -eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          257 -RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       257 -~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                       .|+||||+++++|.++++..    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             ccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence             39999999999999999865    4689999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCc--ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          336 AKLLGAERS--YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       336 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      ++.......  .......||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+......... 
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~~-  235 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVRED-  235 (311)
T ss_dssp             C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCC-
T ss_pred             cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcCC-
Confidence            987644322  22234679999999999999999999999999999999999999996432      122222222211 


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                         ...+.......+.   .+.+++.+||+.||++||++.+++.
T Consensus       236 ---~~~~~~~~~~~~~---~l~~li~~~l~~dP~~R~~~~~~l~  273 (311)
T 3ork_A          236 ---PIPPSARHEGLSA---DLDAVVLKALAKNPENRYQTAAEMR  273 (311)
T ss_dssp             ---CCCHHHHSTTCCH---HHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             ---CCCcccccCCCCH---HHHHHHHHHHhcCHhhChhhHHHHH
Confidence               1111111111233   3445888999999999997666553


No 114
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8e-43  Score=353.22  Aligned_cols=260  Identities=28%  Similarity=0.476  Sum_probs=202.9

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcC-----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLED-----NTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      ++..++|++.+.||+|+||.||+|.+..     +..||+|.+.... ......+.+|+++++.++||||+++++++.+..
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  119 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK  119 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence            4566789999999999999999998653     2359999987543 334467889999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       120 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~  193 (333)
T 1mqb_A          120 PMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGL  193 (333)
T ss_dssp             SEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             CcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCc
Confidence            999999999999999999765   35789999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          336 AKLLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       336 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      ++........  ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....      ..+.........
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~~~  267 (333)
T 1mqb_A          194 SRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHEVMKAINDGF  267 (333)
T ss_dssp             -----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC
T ss_pred             chhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHCCC
Confidence            9876443221  1223456889999999999999999999999999999999 999996432      122222222111


Q ss_pred             ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          413 NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       413 ~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      ..      .. ...++..   +.+++.+||+.||++||++.++++.|+...
T Consensus       268 ~~------~~-~~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          268 RL------PT-PMDCPSA---IYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             CC------CC-CTTCBHH---HHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cC------CC-cccCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            10      01 1123333   445888999999999999999999998643


No 115
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=7.5e-43  Score=343.37  Aligned_cols=249  Identities=23%  Similarity=0.288  Sum_probs=203.3

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      ++|++.+.||+|+||.||+|.+. ++..||+|++........+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            46899999999999999999976 46789999997766666788999999999999999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceecCC
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~~~  341 (521)
                      ++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||++.....
T Consensus        89 ~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           89 TGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             CSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             CCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            999999998765    4689999999999999999999999   99999999999999   7889999999999987654


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      ..  ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||....      ..+..........    ..+ 
T Consensus       162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~----~~~-  227 (277)
T 3f3z_A          162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVMLKIREGTF----TFP-  227 (277)
T ss_dssp             TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC----CCC-
T ss_pred             cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCC----CCC-
Confidence            33  23445799999999998654 8999999999999999999999996432      1122222221110    000 


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                        ..........+.+++.+||+.||++||++.++++
T Consensus       228 --~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          228 --EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             --HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              0000012234555888999999999999999874


No 116
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.2e-43  Score=357.82  Aligned_cols=257  Identities=25%  Similarity=0.440  Sum_probs=201.7

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcE----EEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTN----VAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ..++|++.+.||+|+||+||+|.+. ++..    ||+|.+.... ......+..|+.+++.++||||+++++++.+ ...
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~   89 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSL   89 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSE
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Ccc
Confidence            4568999999999999999999965 3443    7778775432 2333567789999999999999999999864 568


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++
T Consensus        90 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  163 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD  163 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred             EEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence            8999999999999999765   34688899999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          338 LLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       338 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.......   ..+    .+....  
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~--  234 (325)
T 3kex_A          164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPD----LLEKGE--  234 (325)
T ss_dssp             GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHH----HHHTTC--
T ss_pred             ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHH----HHHcCC--
Confidence            7654332 22344668889999999999999999999999999999999 999997554321   111    111111  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      ....+    ..++.   .+.+++.+||+.||.+||++.++++.|+...
T Consensus       235 ~~~~~----~~~~~---~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          235 RLAQP----QICTI---DVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             BCCCC----TTBCT---TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             CCCCC----CcCcH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            00111    11222   2344888999999999999999999998764


No 117
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.5e-43  Score=356.79  Aligned_cols=258  Identities=24%  Similarity=0.294  Sum_probs=198.6

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN-----RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      .++|++.+.||+|+||.||+|.+. ++..||+|.+...     .....+.+..|+++++.++||||+++++++.+....+
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            358999999999999999999975 5788999998643     2344578899999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCC------------------------------------CCCCCHHHHHHHHHHHHHHHHHH
Q 009979          259 LVYEYIDNGNLEQWLHGDVGP------------------------------------HSPLTWEIRMNIILGTAKGLTYL  302 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~al~~L  302 (521)
                      +||||+++|+|.+++......                                    ...+++..++.++.|++.||+||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            999999999999998531100                                    12235777889999999999999


Q ss_pred             HhcCCCCeeecCCCCCCeEeCCCC--CceEeecccceecCCCC---cceeecccccccccccccccC--CCCCCcccchh
Q 009979          303 HEGLEPKVVHRDIKSSNILLDKQW--NPKLSDFGLAKLLGAER---SYVTTRVMGTFGYVAPEYAST--GMLNERSDVYS  375 (521)
Q Consensus       303 H~~~~~~iiHrDik~~NILl~~~~--~vkL~DFGla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS  375 (521)
                      |+.   +|+||||||+|||++.++  .+||+|||+++.+....   ........||+.|+|||++.+  ..++.++||||
T Consensus       185 H~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws  261 (345)
T 3hko_A          185 HNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS  261 (345)
T ss_dssp             HHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred             HHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence            999   999999999999998766  89999999998764321   222345679999999999865  67899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 009979          376 FGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHV  455 (521)
Q Consensus       376 ~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~ev  455 (521)
                      |||++|||++|+.||....      ..+..........  ....+     ........+.+++.+||+.||.+||++.++
T Consensus       262 lG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~  328 (345)
T 3hko_A          262 AGVLLHLLLMGAVPFPGVN------DADTISQVLNKKL--CFENP-----NYNVLSPLARDLLSNLLNRNVDERFDAMRA  328 (345)
T ss_dssp             HHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC--CTTSG-----GGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCC------hHHHHHHHHhccc--ccCCc-----ccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence            9999999999999996432      2222333322211  01111     111122345558889999999999999999


Q ss_pred             HHH
Q 009979          456 IHM  458 (521)
Q Consensus       456 l~~  458 (521)
                      +++
T Consensus       329 l~h  331 (345)
T 3hko_A          329 LQH  331 (345)
T ss_dssp             HHS
T ss_pred             hcC
Confidence            864


No 118
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=2.8e-43  Score=346.91  Aligned_cols=248  Identities=27%  Similarity=0.425  Sum_probs=200.8

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|.+....   ......+.+|+.+++.++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            4568999999999999999999976 46789999986532   2234678899999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus        87 v~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             EECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            99999999999999765    4689999999999999999999998   9999999999999999999999999998654


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...   ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....      ..+.........       
T Consensus       160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~-------  223 (279)
T 3fdn_A          160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISRVE-------  223 (279)
T ss_dssp             -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTC-------
T ss_pred             Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHhCC-------
Confidence            322   2344679999999999999999999999999999999999999996432      222222222111       


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ..+. ...+..   +.+++.+||+.||++|||+.|++++
T Consensus       224 ~~~~-~~~~~~---~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 FTFP-DFVTEG---ARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CCCC-TTSCHH---HHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCCC-CcCCHH---HHHHHHHHhccChhhCCCHHHHhhC
Confidence            0111 112333   4458889999999999999999864


No 119
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=4.5e-43  Score=359.40  Aligned_cols=257  Identities=14%  Similarity=0.179  Sum_probs=208.1

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEE------EcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCeeeEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGV------LEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR---HKNLVRLL  248 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---hpniv~l~  248 (521)
                      ..++++..++|.+.+.||+|+||+||+|.      ..+++.||+|++....   ..++..|+++++.++   |+||++++
T Consensus        57 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~  133 (365)
T 3e7e_A           57 KTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFY  133 (365)
T ss_dssp             SCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEE
T ss_pred             ceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhh
Confidence            34566778899999999999999999994      4468889999986543   456777888888887   99999999


Q ss_pred             EEEeeCCeeeEEEEeccCCchHHhhhcCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---
Q 009979          249 GYCAEGAHRMLVYEYIDNGNLEQWLHGDVG-PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---  324 (521)
Q Consensus       249 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---  324 (521)
                      +++...+..+|||||+++|+|.++++.... ....+++..++.++.|++.||+|||+.   +|+||||||+||||+.   
T Consensus       134 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~  210 (365)
T 3e7e_A          134 SAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFL  210 (365)
T ss_dssp             EEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGT
T ss_pred             eeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccccc
Confidence            999999999999999999999999975321 245799999999999999999999998   9999999999999998   


Q ss_pred             --------CCCceEeecccceecCC-CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCC
Q 009979          325 --------QWNPKLSDFGLAKLLGA-ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRP  395 (521)
Q Consensus       325 --------~~~vkL~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~  395 (521)
                              ++.+||+|||+++.+.. ......+..+||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus       211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  290 (365)
T 3e7e_A          211 EQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG  290 (365)
T ss_dssp             CC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred             CccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence                    89999999999987542 223334567899999999999999999999999999999999999999954322


Q ss_pred             CCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCC-CCHHHHHHHhhc
Q 009979          396 PGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKR-PKMGHVIHMLEA  461 (521)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~R-Pt~~evl~~L~~  461 (521)
                      ..                  ..+...+...+..+...+   ++..|++.+|.+| |++.++.+.|+.
T Consensus       291 ~~------------------~~~~~~~~~~~~~~~~~~---~~~~~l~~~p~~r~~~~~~l~~~l~~  336 (365)
T 3e7e_A          291 GE------------------CKPEGLFRRLPHLDMWNE---FFHVMLNIPDCHHLPSLDLLRQKLKK  336 (365)
T ss_dssp             TE------------------EEECSCCTTCSSHHHHHH---HHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred             Cc------------------eeechhccccCcHHHHHH---HHHHHcCCCCCCcchHHHHHHHHHHH
Confidence            10                  111122223334455555   6679999999999 678888777764


No 120
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.5e-43  Score=345.90  Aligned_cols=258  Identities=27%  Similarity=0.441  Sum_probs=207.6

Q ss_pred             hhcCCCccccc-eEccCCcEEEEEEEEc---CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          182 EVSTNGFADEN-VIGEGGYGIVYHGVLE---DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~-~LG~G~fG~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      .+..++|.+.+ .||+|+||.||+|.+.   ++..||+|.+.... ....+.+.+|+++++.++||||+++++++ ....
T Consensus         5 ~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~   83 (287)
T 1u59_A            5 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA   83 (287)
T ss_dssp             BCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSS
T ss_pred             cccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCC
Confidence            44556777776 9999999999999853   57789999997643 34457789999999999999999999999 4566


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++...   ...+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~  157 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLS  157 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTC
T ss_pred             cEEEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccce
Confidence            89999999999999999754   35789999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcce--eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          337 KLLGAERSYV--TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       337 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      +.........  .....||+.|+|||++.+..++.++|||||||++|||+| |+.||......      +..... ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~i-~~~~  230 (287)
T 1u59_A          158 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAFI-EQGK  230 (287)
T ss_dssp             EECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH------HHHHHH-HTTC
T ss_pred             eeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHH-hcCC
Confidence            9875433322  223457899999999988899999999999999999999 99999754321      111111 1111


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .     +.+. ..++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       231 ~-----~~~~-~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          231 R-----MECP-PECPPE---LYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             C-----CCCC-TTCCHH---HHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             c-----CCCC-CCcCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0     1111 123333   44588899999999999999999999864


No 121
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=6.3e-44  Score=375.78  Aligned_cols=256  Identities=21%  Similarity=0.253  Sum_probs=198.4

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      +..++|++.+.||+|+||.||+|... +++.||||++...   .......+..|+.+++.++||||+++++++.+....+
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            44568999999999999999999975 5889999998653   2233456778999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE-GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      +||||+++|+|.+++...    ..+++..+..++.|++.||+|||+ .   +|+||||||+||||+.++.+||+|||+++
T Consensus       225 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~  297 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCK  297 (446)
T ss_dssp             EEECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred             EEEeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCce
Confidence            999999999999999765    478999999999999999999998 7   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      ..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+..........    
T Consensus       298 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~----  366 (446)
T 4ejn_A          298 EGIKD-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEI----  366 (446)
T ss_dssp             TTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC----
T ss_pred             eccCC-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHHhCCC----
Confidence            64322 223445789999999999999999999999999999999999999996432      1222222222110    


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhccC
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHMLEAEE  463 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~~  463 (521)
                         .+.. ..+.   .+.+++.+||+.||.+||     ++.|++++---..
T Consensus       367 ---~~p~-~~~~---~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          367 ---RFPR-TLGP---EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             ---CCCT-TSCH---HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             ---CCCc-cCCH---HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccC
Confidence               1111 1223   344588899999999999     9999986544333


No 122
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=1.5e-43  Score=357.34  Aligned_cols=266  Identities=23%  Similarity=0.362  Sum_probs=210.5

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-----cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEe--eCCe
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA--EGAH  256 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~--~~~~  256 (521)
                      ..++|++.+.||+|+||.||+|.+     .++..||||++........+.+.+|+++++.++||||+++++++.  +...
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  100 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS  100 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence            346899999999999999999985     357889999998777777788999999999999999999999886  4566


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  174 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA  174 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred             EEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence            89999999999999999764   24689999999999999999999998   9999999999999999999999999999


Q ss_pred             eecCCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCC--------CcccHHHHHH
Q 009979          337 KLLGAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPP--------GEVNLVEWLK  406 (521)
Q Consensus       337 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~--------~~~~~~~~~~  406 (521)
                      +........  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||......        ........+.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  254 (327)
T 3lxl_A          175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL  254 (327)
T ss_dssp             EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred             eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence            987543322  223456888999999999999999999999999999999999998532110        0011111111


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                      .......     .... ...++..   +.+++.+||+.||++|||+.+++++|+....
T Consensus       255 ~~~~~~~-----~~~~-~~~~~~~---l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          255 ELLEEGQ-----RLPA-PPACPAE---VHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHHHTTC-----CCCC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             HHhhccc-----CCCC-CCcccHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            1111111     0011 1123333   4458889999999999999999999987643


No 123
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=3.9e-43  Score=377.09  Aligned_cols=260  Identities=23%  Similarity=0.281  Sum_probs=210.5

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      ...+..++|.+.+.||+|+||.||+|... +++.||+|++.+..   ......+..|+++|+.++||||+++++++.+..
T Consensus       178 ~~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~  257 (576)
T 2acx_A          178 RQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD  257 (576)
T ss_dssp             TSCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC
Confidence            33466778999999999999999999975 68899999986532   223466888999999999999999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..|+||||++||+|.+++....  ...+++..++.++.||+.||+|||++   +|+||||||+||||+.++++||+|||+
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGl  332 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGL  332 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEeccc
Confidence            9999999999999999997652  34589999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ++......  .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........  ..+....... ..  
T Consensus       333 a~~~~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~-~~--  405 (576)
T 2acx_A          333 AVHVPEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKE-VP--  405 (576)
T ss_dssp             CEECCTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHH-CC--
T ss_pred             ceecccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhc-cc--
Confidence            98764432  23446899999999999999999999999999999999999999976543221  1222222111 11  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHML  459 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L  459 (521)
                          ..+.. ..+.   .+.+++.+||+.||.+||     ++.||+++-
T Consensus       406 ----~~~p~-~~s~---~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp  446 (576)
T 2acx_A          406 ----EEYSE-RFSP---QARSLCSQLLCKDPAERLGCRGGSAREVKEHP  446 (576)
T ss_dssp             ----CCCCT-TSCH---HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred             ----ccCCc-cCCH---HHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence                11111 1223   345588899999999999     788887553


No 124
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.4e-43  Score=350.90  Aligned_cols=262  Identities=24%  Similarity=0.336  Sum_probs=198.7

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ++|++.+.||+|+||+||+|.+. +++.||+|++.....  ...+.+.+|+++++.++||||+++++++.+....++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            57999999999999999999976 488999999865433  234678889999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++++|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++......
T Consensus        83 ~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           83 YCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             CCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             eCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            99999999988754    5689999999999999999999999   9999999999999999999999999999876533


Q ss_pred             CcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhh-----------
Q 009979          343 RSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT-----------  410 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-----------  410 (521)
                      .. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......   .....+.....           
T Consensus       156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  231 (311)
T 4agu_A          156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV---DQLYLIRKTLGDLIPRHQQVFS  231 (311)
T ss_dssp             -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCHHHHHHHH
T ss_pred             cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhcccccccccccc
Confidence            22 2344578999999999875 67899999999999999999999999654321   11111111110           


Q ss_pred             -ccccc--cCCCcccCCC---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          411 -NRNAE--GVLDPRLQEK---PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       411 -~~~~~--~~~d~~l~~~---~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .....  ...++.....   ..+.....+.+++.+||+.||++|||+.|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence             00000  0111100000   001122345568889999999999999999854


No 125
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-43  Score=359.57  Aligned_cols=263  Identities=23%  Similarity=0.303  Sum_probs=209.0

Q ss_pred             cCCCccccceEccCCcEEEEEEEE----cCCcEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeC
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL----EDNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEG  254 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~  254 (521)
                      ..++|++.+.||+|+||.||+|+.    .+++.||||++....    ....+.+..|+++++.+ +||||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            446899999999999999999997    368899999986432    22345577799999999 699999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      ...++||||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus       132 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          132 TKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             ceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCC
Confidence            9999999999999999999865    4689999999999999999999998   99999999999999999999999999


Q ss_pred             cceecCCCCcceeecccccccccccccccC--CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYAST--GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      +++.+...........+||+.|+|||++.+  ..++.++|||||||++|||++|+.||.......  .............
T Consensus       205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~  282 (355)
T 1vzo_A          205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE  282 (355)
T ss_dssp             EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCC
T ss_pred             CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccC
Confidence            998765444444455789999999999975  457899999999999999999999997544322  2222223222211


Q ss_pred             ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhccCCCc
Q 009979          413 NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRP-----KMGHVIHMLEAEEFPF  466 (521)
Q Consensus       413 ~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RP-----t~~evl~~L~~~~~~~  466 (521)
                             +.+.. ..+.   .+.+++.+||+.||++||     ++.+++++.--....+
T Consensus       283 -------~~~~~-~~~~---~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          283 -------PPYPQ-EMSA---LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             -------CCCCT-TSCH---HHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             -------CCCCc-ccCH---HHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence                   11111 1223   344588899999999999     9999987765544443


No 126
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=9.8e-43  Score=350.49  Aligned_cols=251  Identities=24%  Similarity=0.318  Sum_probs=204.9

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh------hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ------AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ++|++.+.||+|+||.||+|.+. ++..||+|.+......      ..+.+.+|+.+++.++||||+++++++.+....+
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            46899999999999999999976 5889999998654322      3577999999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC----CceEeecc
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW----NPKLSDFG  334 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~----~vkL~DFG  334 (521)
                      +||||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++    .+||+|||
T Consensus        92 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999764    5689999999999999999999999   999999999999999887    79999999


Q ss_pred             cceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      +++......  ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....      ..+.+.......  
T Consensus       165 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~--  234 (321)
T 2a2a_A          165 LAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITSVS--  234 (321)
T ss_dssp             TCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTC--
T ss_pred             cceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcc--
Confidence            998765432  2344579999999999999999999999999999999999999996432      122222222110  


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       ...++.+.. ..+   ..+.+++.+||+.||++|||+.+++++
T Consensus       235 -~~~~~~~~~-~~~---~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          235 -YDFDEEFFS-HTS---ELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             -CCCCHHHHT-TCC---HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             -cccChhhhc-ccC---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             001111101 122   334558889999999999999999864


No 127
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=5.5e-43  Score=370.28  Aligned_cols=248  Identities=22%  Similarity=0.384  Sum_probs=205.0

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|.+.+.||+|+||.||+|.+. +|+.||||++.....   .....+.+|+.+++.++||||+++++++......++
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            3468999999999999999999976 689999999865422   234678899999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++++||+|||+++..
T Consensus        94 v~E~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~  166 (476)
T 2y94_A           94 VMEYVSGGELFDYICKN----GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM  166 (476)
T ss_dssp             EEECCSSEEHHHHTTSS----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhc
Confidence            99999999999999754    5799999999999999999999998   9999999999999999999999999999976


Q ss_pred             CCCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ....  .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....      .......... .    .
T Consensus       167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~------~~~~~~i~~~-~----~  233 (476)
T 2y94_A          167 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV------PTLFKKICDG-I----F  233 (476)
T ss_dssp             CTTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS------HHHHHHHHTT-C----C
T ss_pred             cccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH------HHHHHHHhcC-C----c
Confidence            4432  2345689999999999988765 6899999999999999999999974432      1222222221 1    0


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                        .. +...+.   .+.+++.+||+.||.+|||+.++++
T Consensus       234 --~~-p~~~s~---~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          234 --YT-PQYLNP---SVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             --CC-CTTCCH---HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CC-CccCCH---HHHHHHHHHcCCCchhCcCHHHHHh
Confidence              01 111223   3455888999999999999999986


No 128
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.7e-42  Score=340.96  Aligned_cols=248  Identities=25%  Similarity=0.395  Sum_probs=182.1

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ++|.+.+.||+|+||.||+|... +++.||+|.+.....   ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            47999999999999999999974 688999999864322   22467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++.....
T Consensus        91 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           91 EMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             ECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             ecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            999999999999865   35789999999999999999999999   999999999999999999999999999987643


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      ... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........      .....       .+..
T Consensus       165 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~-------~~~~  230 (278)
T 3cok_A          165 PHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NKVVL-------ADYE  230 (278)
T ss_dssp             ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCS-------SCCC
T ss_pred             CCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HHHhh-------cccC
Confidence            222 223457899999999999999999999999999999999999999754432111      10000       0111


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      +. ...+.   .+.+++.+||+.||++||++.++++
T Consensus       231 ~~-~~~~~---~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          231 MP-SFLSI---EAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CC-TTSCH---HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             Cc-cccCH---HHHHHHHHHcccCHhhCCCHHHHhc
Confidence            11 11233   3445888999999999999999974


No 129
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=1.7e-42  Score=343.62  Aligned_cols=260  Identities=20%  Similarity=0.248  Sum_probs=203.3

Q ss_pred             CCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEE-eeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC-AEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~-~~~~~~~lV~e  262 (521)
                      .++|++.+.||+|+||.||+|.+ .+++.||||++.....  ...+..|+++++.++|++++..++++ ......++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence            46899999999999999999996 4688899998654322  23578899999999988777666655 66778899999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~  339 (521)
                      |+ +++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++..
T Consensus        86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             CC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             cc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            99 88999999854   34699999999999999999999999   99999999999999   78999999999999976


Q ss_pred             CCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          340 GAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       340 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      ......      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+........
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence            543321      22356799999999999999999999999999999999999999987655444444333222211110


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ..     .+. ...+   ..+.+++.+||+.||++|||+.++++.|+..
T Consensus       239 ~~-----~~~-~~~~---~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~  278 (296)
T 4hgt_A          239 IE-----VLC-KGYP---SEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             HH-----HHT-TTSC---HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             hh-----hhh-ccCC---HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence            00     000 1122   3455588899999999999999999999753


No 130
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=6.6e-44  Score=360.52  Aligned_cols=266  Identities=24%  Similarity=0.405  Sum_probs=212.0

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEcC-C-----cEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEEEEE
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLED-N-----TNVAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLLGYC  251 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~  251 (521)
                      .+++..++|.+.+.||+|+||.||+|.+.. +     ..||+|.+.... ....+.+.+|+++++.+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            456778899999999999999999999753 2     379999987643 33456789999999999 899999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVG----------PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNIL  321 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NIL  321 (521)
                      .+....++||||+++|+|.+++.....          ....+++..++.++.|++.||+|||+.   +|+||||||+|||
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence            999999999999999999999975311          134689999999999999999999999   9999999999999


Q ss_pred             eCCCCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcc
Q 009979          322 LDKQWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEV  399 (521)
Q Consensus       322 l~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~  399 (521)
                      ++.++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||+| |..||.......  
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--  274 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--  274 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--
Confidence            999999999999999876433322 2234567889999999999999999999999999999999 999997543221  


Q ss_pred             cHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          400 NLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      .    +........     ... ....++.   .+.+++.+||+.||.+|||+.++++.|+...
T Consensus       275 ~----~~~~~~~~~-----~~~-~~~~~~~---~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          275 K----FYKLVKDGY-----QMA-QPAFAPK---NIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             H----HHHHHHHTC-----CCC-CCTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H----HHHHHhcCC-----CCC-CCCCCCH---HHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            1    111121111     000 1111233   3455888999999999999999999998643


No 131
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=2.2e-42  Score=341.17  Aligned_cols=252  Identities=19%  Similarity=0.311  Sum_probs=203.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++....  ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            468999999999999999999975 58899999986543  334467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC---ceEeeccccee
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKL  338 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~---vkL~DFGla~~  338 (521)
                      ||+++++|.+++...    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||++..
T Consensus        85 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~  157 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE  157 (284)
T ss_dssp             CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence            999999999988765    4689999999999999999999999   9999999999999976655   99999999987


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ......  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||....      ..+......... . ...
T Consensus       158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~-~-~~~  227 (284)
T 3kk8_A          158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGA-Y-DYP  227 (284)
T ss_dssp             CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTC-C-CCC
T ss_pred             cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc------hhHHHHHHHhcc-c-cCC
Confidence            644322  234679999999999999999999999999999999999999996432      112222222111 0 011


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .+.  ....+..   +.+++.+||+.||++|||+.|++++
T Consensus       228 ~~~--~~~~~~~---~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          228 SPE--WDTVTPE---AKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             TTT--TTTSCHH---HHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             chh--hcccCHH---HHHHHHHHcccChhhCCCHHHHhcC
Confidence            111  1112333   4458889999999999999999853


No 132
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=9.5e-43  Score=360.39  Aligned_cols=253  Identities=20%  Similarity=0.331  Sum_probs=198.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVR--HKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|.+.+.||+|+||.||+|...+++.||||++...  .....+.+.+|+++|+.++  ||||+++++++......||
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            34569999999999999999999888999999998654  3344578899999999996  5999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||| +.+++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||+++.+
T Consensus       134 v~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             EEE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             EEe-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            999 5688999999875    4788999999999999999999998   999999999999996 578999999999876


Q ss_pred             CCCCcc-eeecccccccccccccccC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          340 GAERSY-VTTRVMGTFGYVAPEYAST-----------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       340 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ...... .....+||+.|+|||++.+           ..++.++|||||||++|||++|+.||....     +....+..
T Consensus       205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~  279 (390)
T 2zmd_A          205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHA  279 (390)
T ss_dssp             ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHH
T ss_pred             cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHH
Confidence            433222 2345679999999999865           468899999999999999999999996432     22222333


Q ss_pred             HhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          408 MVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       408 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      ......     ...+... .+.   .+.+++.+||+.||++||++.|++++.
T Consensus       280 ~~~~~~-----~~~~~~~-~~~---~~~~li~~~L~~dP~~Rps~~ell~hp  322 (390)
T 2zmd_A          280 IIDPNH-----EIEFPDI-PEK---DLQDVLKCCLKRDPKQRISIPELLAHP  322 (390)
T ss_dssp             HHCTTS-----CCCCCCC-SCH---HHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             HhCccc-----cCCCCcc-chH---HHHHHHHHHcccChhhCCCHHHHhhCc
Confidence            322111     1111111 223   345588899999999999999998653


No 133
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=2e-43  Score=358.94  Aligned_cols=251  Identities=24%  Similarity=0.343  Sum_probs=199.0

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ++|++.+.||+|+||.||+|.+. +++.||+|.+.+....    ...|++++.++ +||||+++++++.++...|+||||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            47899999999999999999976 5888999999765432    34588888887 799999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC-C---CceEeecccceec
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ-W---NPKLSDFGLAKLL  339 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~-~---~vkL~DFGla~~~  339 (521)
                      +++|+|.+++...    ..+++..+..++.|++.||+|||++   +|+||||||+|||+.+. +   .+||+|||+++..
T Consensus        98 ~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           98 MKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             CCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             CCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            9999999999765    5689999999999999999999999   99999999999998433 3   4999999999976


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......   ...+.+...... ...    
T Consensus       171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~-~~~----  241 (342)
T 2qr7_A          171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGSG-KFS----  241 (342)
T ss_dssp             BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHHC-CCC----
T ss_pred             cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHccC-Ccc----
Confidence            44332 234567999999999998888999999999999999999999999754322   222333332221 110    


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                        +...........+.+++.+||+.||++||++.+++++
T Consensus       242 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          242 --LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             --CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             --cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence              1111111122334458889999999999999998753


No 134
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=356.26  Aligned_cols=259  Identities=22%  Similarity=0.338  Sum_probs=190.7

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEe-----
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCA-----  252 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~-----  252 (521)
                      .+++...+|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+.+++++. ||||+++++++.     
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            34556678999999999999999999975 68899999997777677788999999999996 999999999984     


Q ss_pred             ---eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEeCCCCC
Q 009979          253 ---EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK--VVHRDIKSSNILLDKQWN  327 (521)
Q Consensus       253 ---~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~--iiHrDik~~NILl~~~~~  327 (521)
                         .....++||||+. |+|.+++.... ....+++..++.++.|++.||+|||+.   +  |+||||||+|||++.++.
T Consensus       102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             STTSSEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSC
T ss_pred             cccCCceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCC
Confidence               3445789999996 69999886532 135699999999999999999999998   7  999999999999999999


Q ss_pred             ceEeecccceecCCCCcce-----------eecccccccccccccc---cCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          328 PKLSDFGLAKLLGAERSYV-----------TTRVMGTFGYVAPEYA---STGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       328 vkL~DFGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      +||+|||+++.........           .....||+.|+|||++   .+..++.++|||||||++|||++|+.||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            9999999998764432211           1135689999999998   5677899999999999999999999999643


Q ss_pred             CCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          394 RPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...      ......         .... .....+..   +.+++.+||+.||.+||++.++++.|+..
T Consensus       257 ~~~------~~~~~~---------~~~~-~~~~~~~~---~~~li~~~l~~~p~~Rps~~e~l~~l~~~  306 (337)
T 3ll6_A          257 AKL------RIVNGK---------YSIP-PHDTQYTV---FHSLIRAMLQVNPEERLSIAEVVHQLQEI  306 (337)
T ss_dssp             ------------------------CCCC-TTCCSSGG---GHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHH------HhhcCc---------ccCC-cccccchH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            221      111100         0000 01112222   44588899999999999999999999764


No 135
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=3.6e-43  Score=351.65  Aligned_cols=256  Identities=29%  Similarity=0.485  Sum_probs=197.7

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ..++|++.+.||+|+||.||+|.+. ++.||+|.+...  ...+.+..|++++++++||||+++++++.+  ..++||||
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~   80 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEY   80 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEEC
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEc
Confidence            3457899999999999999999985 788999998643  345778999999999999999999998874  47999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC-ceEeecccceecCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN-PKLSDFGLAKLLGAE  342 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~-vkL~DFGla~~~~~~  342 (521)
                      +++|+|.++++... ....+++..++.++.|++.||+|||+....+|+||||||+|||++.++. +||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           81 AEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             CTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             CCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            99999999998652 2335788999999999999999999932128999999999999998887 799999999865322


Q ss_pred             CcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCccc
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL  422 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  422 (521)
                          .....||+.|+|||++.+..++.++|||||||++|||++|+.||......    .......... ..     .+.+
T Consensus       160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~-~~-----~~~~  225 (307)
T 2eva_A          160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWAVHN-GT-----RPPL  225 (307)
T ss_dssp             ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHHHHT-TC-----CCCC
T ss_pred             ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHHHhc-CC-----CCCc
Confidence                23446999999999999999999999999999999999999999754321    1111111111 11     1111


Q ss_pred             CCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          423 QEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       423 ~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      .. ..+..   +.+++.+||+.||++|||+.++++.|+...
T Consensus       226 ~~-~~~~~---l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          226 IK-NLPKP---IESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             BT-TCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             cc-ccCHH---HHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            11 12333   445888999999999999999999998754


No 136
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=4e-43  Score=352.03  Aligned_cols=260  Identities=21%  Similarity=0.296  Sum_probs=198.2

Q ss_pred             CCcccc-ceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADE-NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~-~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      +.|.+. +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.++...++|||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            467774 78999999999999954 6889999999776666667889999999985 79999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC---ceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~---vkL~DFGla~~~  339 (521)
                      |+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||++...
T Consensus        92 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           92 KMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             cCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            99999999999865    4689999999999999999999999   9999999999999988776   999999999865


Q ss_pred             CCCCc------ceeecccccccccccccccC-----CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcc--------c
Q 009979          340 GAERS------YVTTRVMGTFGYVAPEYAST-----GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV--------N  400 (521)
Q Consensus       340 ~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~--------~  400 (521)
                      .....      .......||+.|+|||++.+     ..++.++|||||||++|||++|+.||.........        .
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence            32211      11223569999999999865     56899999999999999999999999765432210        0


Q ss_pred             HHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          401 LVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....+...+.....      .+...........+.+++.+||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~i~~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          245 CQNMLFESIQEGKY------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHHCCC------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHHhccCc------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            01111111111110      00000001112345568889999999999999999864


No 137
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=2.8e-42  Score=342.21  Aligned_cols=260  Identities=19%  Similarity=0.243  Sum_probs=206.4

Q ss_pred             CCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEE-eeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC-AEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~-~~~~~~~lV~e  262 (521)
                      .++|++.+.||+|+||.||+|.+ .+++.||+|.+.....  .+.+..|+.+++.++|++++..+.++ .+....++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46899999999999999999997 4688999998865432  34688899999999988866665554 66778899999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~  339 (521)
                      |+ +++|.+++...   ...+++..++.++.|++.||+|||++   +|+||||||+|||+   +.++.+||+|||+++..
T Consensus        86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             ec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            99 88999999754   35799999999999999999999999   99999999999999   48889999999999976


Q ss_pred             CCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          340 GAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       340 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      ......      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+........
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 3uzp_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence            543321      12456799999999999999999999999999999999999999987654444443333322111110


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .     +.+. ...+   ..+.+++.+||+.||++||++.+|++.|+..
T Consensus       239 ~-----~~~~-~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~  278 (296)
T 3uzp_A          239 I-----EVLC-KGYP---SEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  278 (296)
T ss_dssp             H-----HHHT-TTSC---HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred             h-----HHHH-hhCC---HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence            0     0000 1122   3355588899999999999999999999753


No 138
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=7.8e-43  Score=349.52  Aligned_cols=267  Identities=24%  Similarity=0.371  Sum_probs=212.3

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEE------cCCcEEEEEEeccCCh-hhHHHHHHHHHHHhcC-CCCCeeeEEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRV-RHKNLVRLLG  249 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~hpniv~l~~  249 (521)
                      ...+++..++|++.+.||+|+||.||+|.+      .+++.||+|.+..... ...+.+.+|+++++.+ +||||+++++
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            456677788999999999999999999985      2457899999876433 3446788999999999 7999999999


Q ss_pred             EEeeCC-eeeEEEEeccCCchHHhhhcCCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 009979          250 YCAEGA-HRMLVYEYIDNGNLEQWLHGDVGP------------HSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIK  316 (521)
Q Consensus       250 ~~~~~~-~~~lV~e~~~~g~L~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik  316 (521)
                      ++...+ ..++||||+++|+|.+++......            ...+++..++.++.|++.||.|||+.   +|+|||||
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dik  175 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLA  175 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCc
Confidence            987754 589999999999999999875321            12388999999999999999999999   99999999


Q ss_pred             CCCeEeCCCCCceEeecccceecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCC
Q 009979          317 SSNILLDKQWNPKLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSR  394 (521)
Q Consensus       317 ~~NILl~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~  394 (521)
                      |+|||++.++.+||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |..||....
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence            9999999999999999999987644332 22344668999999999999999999999999999999998 999997543


Q ss_pred             CCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          395 PPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...  .    +...+.....     .... ...+.   .+.+++.+||+.||.+|||+.+++++|+..
T Consensus       256 ~~~--~----~~~~~~~~~~-----~~~~-~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~  308 (316)
T 2xir_A          256 IDE--E----FCRRLKEGTR-----MRAP-DYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHLGNL  308 (316)
T ss_dssp             CSH--H----HHHHHHHTCC-----CCCC-TTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhH--H----HHHHhccCcc-----CCCC-CCCCH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            221  1    1111111110     0111 11233   344588899999999999999999999754


No 139
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=3.8e-43  Score=360.88  Aligned_cols=247  Identities=26%  Similarity=0.296  Sum_probs=193.7

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHH-HhcCCCCCeeeEEEEEeeCCeee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEA-IGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~-l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ..++|++.+.||+|+||.||+|++. ++..||+|++.+...   .....+..|..+ ++.++||||+++++++.+....|
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            4468999999999999999999976 478899999965432   233455667766 57789999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||++||+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++.
T Consensus       116 lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            999999999999999765    4688999999999999999999999   999999999999999999999999999986


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      .... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...      +..+..........     
T Consensus       189 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~------~~~~~~~~i~~~~~-----  256 (373)
T 2r5t_A          189 NIEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR------NTAEMYDNILNKPL-----  256 (373)
T ss_dssp             GBCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS------BHHHHHHHHHHSCC-----
T ss_pred             cccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHhccc-----
Confidence            4322 22345578999999999999999999999999999999999999999643      22333333332210     


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHV  455 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~ev  455 (521)
                        .+.. ..+..   +.+++.+||+.||.+||++.+.
T Consensus       257 --~~~~-~~~~~---~~~li~~lL~~dp~~R~~~~~~  287 (373)
T 2r5t_A          257 --QLKP-NITNS---ARHLLEGLLQKDRTKRLGAKDD  287 (373)
T ss_dssp             --CCCS-SSCHH---HHHHHHHHTCSSGGGSTTTTTT
T ss_pred             --CCCC-CCCHH---HHHHHHHHcccCHHhCCCCCCC
Confidence              1111 12333   4458889999999999998533


No 140
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=1.2e-42  Score=343.97  Aligned_cols=252  Identities=21%  Similarity=0.356  Sum_probs=197.3

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ++|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+..|+++++.++||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            47899999999999999999975 58899999987643 23457889999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceecC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~~  340 (521)
                      +++|+|.+++.........+++..++.++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            999999999865432346799999999999999999999999   99999999999999   456789999999998754


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ...  ......||+.|+|||++. ..++.++|||||||++|||++|+.||....      ..+..........     ..
T Consensus       179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~-----~~  244 (285)
T 3is5_A          179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKATYKEP-----NY  244 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC-----CC
T ss_pred             Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhhccCCc-----cc
Confidence            322  234567999999999885 568899999999999999999999996432      1222222111110     00


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .....+.+.   .+.+++.+||+.||++|||+.|+++
T Consensus       245 ~~~~~~~~~---~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          245 AVECRPLTP---QAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CC--CCCCH---HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccCcCCH---HHHHHHHHHccCChhhCcCHHHHhc
Confidence            111111233   3445888999999999999999984


No 141
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.3e-42  Score=350.73  Aligned_cols=261  Identities=20%  Similarity=0.299  Sum_probs=203.1

Q ss_pred             hhhhhhcCCCcccc-ceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCC-CCCeeeEEEEEe
Q 009979          178 LRELEVSTNGFADE-NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVR-HKNLVRLLGYCA  252 (521)
Q Consensus       178 ~~~~~~~~~~~~~~-~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~  252 (521)
                      +...+...++|.+. +.||+|+||.||+|... +++.||+|++....  ......+..|+.+++.+. ||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            33444455677777 89999999999999976 58899999987543  233577889999999995 699999999999


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCce
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPK  329 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~vk  329 (521)
                      +....++||||+++|+|.+++...  ....+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+|
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence            999999999999999999998654  246789999999999999999999999   9999999999999987   78999


Q ss_pred             EeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          330 LSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       330 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      |+|||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....      .+......
T Consensus       175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~  246 (327)
T 3lm5_A          175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN------QETYLNIS  246 (327)
T ss_dssp             ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH
T ss_pred             EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc------hHHHHHHH
Confidence            99999999764332  23446799999999999999999999999999999999999999964321      11111111


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ... . ....+..  ...+.   .+.+++.+||+.||++|||+.+++++
T Consensus       247 ~~~-~-~~~~~~~--~~~~~---~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          247 QVN-V-DYSEETF--SSVSQ---LATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             HTC-C-CCCTTTT--TTSCH---HHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             hcc-c-ccCchhh--cccCH---HHHHHHHHHcCCChhhCcCHHHHhCC
Confidence            110 0 0001111  11233   34458889999999999999999854


No 142
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=5.4e-43  Score=351.97  Aligned_cols=265  Identities=22%  Similarity=0.370  Sum_probs=189.1

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||+|.+..... ...+.+.+|+++++.++||||+++++++.++...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            457999999999999999999965 588999999865432 334678899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          263 YIDNGNLEQWLHGDV--GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |++ |+|.+++....  .....+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 59999886532  1234689999999999999999999998   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc-----
Q 009979          341 AERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA-----  414 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-----  414 (521)
                      .... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....   ......+.........     
T Consensus       160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~  235 (317)
T 2pmi_A          160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND---EEQLKLIFDIMGTPNESLWPS  235 (317)
T ss_dssp             SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCSCCTTTCGG
T ss_pred             CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCChhHhhh
Confidence            3322 2334578999999999876 4689999999999999999999999974432   1111111111110000     


Q ss_pred             -c--cCCCcccCCC---c---------cHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          415 -E--GVLDPRLQEK---P---------CSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       415 -~--~~~d~~l~~~---~---------~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                       .  ....+.+...   .         .......+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence             0  0000000000   0         0011234556888999999999999999874


No 143
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=3.4e-43  Score=355.55  Aligned_cols=274  Identities=25%  Similarity=0.379  Sum_probs=200.9

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHH--HhcCCCCCeeeEEEEEee-----CC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEA--IGRVRHKNLVRLLGYCAE-----GA  255 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~--l~~l~hpniv~l~~~~~~-----~~  255 (521)
                      +..++|++.+.||+|+||.||+|.+ +++.||||++....   ...+..|.++  +..++||||+++++++..     ..
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            4567899999999999999999987 58899999986432   2334444444  455899999999986532     23


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeEeCCCCCce
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL------EPKVVHRDIKSSNILLDKQWNPK  329 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~------~~~iiHrDik~~NILl~~~~~vk  329 (521)
                      ..++||||+++|+|.+++...     ..++..++.++.|++.||+|||+..      .++|+||||||+|||++.++.+|
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k  160 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV  160 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred             eEEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence            568999999999999999765     4588999999999999999999762      33899999999999999999999


Q ss_pred             EeecccceecCCCC-------cceeecccccccccccccccC-------CCCCCcccchhHHHHHHHHHhCCCCCCCCCC
Q 009979          330 LSDFGLAKLLGAER-------SYVTTRVMGTFGYVAPEYAST-------GMLNERSDVYSFGILIMEVISGRNPVDYSRP  395 (521)
Q Consensus       330 L~DFGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~  395 (521)
                      |+|||+++.+....       ........||+.|+|||++.+       ..++.++|||||||++|||++|..||.....
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            99999998764322       112234579999999999876       4567789999999999999999877654332


Q ss_pred             CCccc-----------HHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          396 PGEVN-----------LVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       396 ~~~~~-----------~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                      .....           ..+..............+......  .......+.+++.+||+.||++|||+.|+++.|+....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE--NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC--CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc--ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            21110           111112222211111111111111  22344556678899999999999999999999987655


Q ss_pred             Cch
Q 009979          465 PFR  467 (521)
Q Consensus       465 ~~~  467 (521)
                      .+.
T Consensus       319 ~~~  321 (336)
T 3g2f_A          319 IWE  321 (336)
T ss_dssp             CCC
T ss_pred             HHH
Confidence            443


No 144
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.4e-42  Score=350.06  Aligned_cols=263  Identities=26%  Similarity=0.382  Sum_probs=208.0

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCeeeEEEEEeeCC----
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGR--VRHKNLVRLLGYCAEGA----  255 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~hpniv~l~~~~~~~~----  255 (521)
                      +...++|.+.+.||+|+||.||+|.+ +++.||||.+...   ....+..|++++..  ++||||+++++++....    
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            44456899999999999999999998 4889999998543   34567788888887  78999999999998776    


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEeCCCCC
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH--------EGLEPKVVHRDIKSSNILLDKQWN  327 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~~iiHrDik~~NILl~~~~~  327 (521)
                      ..++||||+++|+|.+++...     .+++..++.++.|++.||+|||        +.   +|+||||||+|||++.++.
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~  185 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT  185 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSC
T ss_pred             eeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCC
Confidence            789999999999999999754     5899999999999999999999        76   9999999999999999999


Q ss_pred             ceEeecccceecCCCCcc---eeecccccccccccccccCCC------CCCcccchhHHHHHHHHHhC----------CC
Q 009979          328 PKLSDFGLAKLLGAERSY---VTTRVMGTFGYVAPEYASTGM------LNERSDVYSFGILIMEVISG----------RN  388 (521)
Q Consensus       328 vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwS~Gvvl~elltG----------~~  388 (521)
                      +||+|||+++........   ......||+.|+|||++.+..      ++.++|||||||++|||+||          ..
T Consensus       186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~  265 (342)
T 1b6c_B          186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL  265 (342)
T ss_dssp             EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence            999999999876544322   224457999999999987652      34689999999999999999          78


Q ss_pred             CCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCC-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          389 PVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK-PCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       389 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ||....+.. .....+... +...    ...+.+... ........+.+++.+||+.||++|||+.+|+++|+..
T Consensus       266 p~~~~~~~~-~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          266 PYYDLVPSD-PSVEEMRKV-VCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             TTTTTSCSS-CCHHHHHHH-HTTS----CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CccccCcCc-ccHHHHHHH-HHHH----HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            886544322 222222222 2221    122222211 1234555667799999999999999999999999864


No 145
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=9.3e-43  Score=373.00  Aligned_cols=260  Identities=22%  Similarity=0.282  Sum_probs=210.2

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      .+..++|.+.+.||+|+||.||+|++. +++.||+|++.+...   .....+..|+++++.++||||+++++++.+....
T Consensus       181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence            345578999999999999999999975 589999999965422   2346788899999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      |+||||++||+|.+++.........+++..++.++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceee
Confidence            999999999999999987644456799999999999999999999999   99999999999999999999999999999


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      .+..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.......  ...+.........     
T Consensus       338 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~i~~~~-----  409 (543)
T 3c4z_A          338 ELKAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQRVLEQA-----  409 (543)
T ss_dssp             ECCTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHHHHHCC-----
T ss_pred             eccCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHHHhhcc-----
Confidence            7654322 2344689999999999999999999999999999999999999997653221  2222233322211     


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM-----GHVIHM  458 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~  458 (521)
                        ..+. ...+..   +.+++.+||+.||++||++     .+|+.+
T Consensus       410 --~~~p-~~~s~~---~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          410 --VTYP-DKFSPA---SKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             --CCCC-TTSCHH---HHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             --cCCC-cccCHH---HHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence              0111 112333   4458889999999999975     666643


No 146
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4.8e-43  Score=344.53  Aligned_cols=246  Identities=22%  Similarity=0.351  Sum_probs=179.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++....   ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus        12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (275)
T 2eue_A           12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred             ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence            357999999999999999999854 68899999986542   23356788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+ +++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||++....
T Consensus        92 ~e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  163 (275)
T 2eue_A           92 IEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             EECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred             ehhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence            9999 67888888765    4689999999999999999999999   99999999999999999999999999998654


Q ss_pred             CCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ...  ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....      ............ .     
T Consensus       164 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~-~-----  229 (275)
T 2eue_A          164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNISNGV-Y-----  229 (275)
T ss_dssp             -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTC-C-----
T ss_pred             Ccc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCC-C-----
Confidence            332  2334579999999999987765 789999999999999999999996432      122222222111 0     


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                       .+. ...+..   +.+++.+||+.||++|||+.|+++
T Consensus       230 -~~~-~~~~~~---~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          230 -TLP-KFLSPG---AAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -CCC-TTSCHH---HHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -CCC-ccCCHH---HHHHHHHHhhcCHhHCCCHHHHhh
Confidence             111 112333   445888999999999999999974


No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=2.4e-42  Score=351.98  Aligned_cols=247  Identities=27%  Similarity=0.414  Sum_probs=201.1

Q ss_pred             CCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      +.|...+.||+|+||.||+|.. .+++.||||++....   ....+.+.+|+++++.++||||+++++++.++...++||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            4588999999999999999996 468889999986543   233467889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+. |+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       134 e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          134 EYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             ECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             ecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            9997 5888888654   35789999999999999999999999   999999999999999999999999999986543


Q ss_pred             CCcceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          342 ERSYVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      .     ....||+.|+|||++.   ...++.++|||||||++|||++|+.||....      ....+.......      
T Consensus       207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~~------  269 (348)
T 1u5q_A          207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNE------  269 (348)
T ss_dssp             B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSC------
T ss_pred             C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhcC------
Confidence            2     3457999999999884   5779999999999999999999999996432      222233332221      


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      .+.+.....+..+.   +++.+||+.||++|||+.+++++.
T Consensus       270 ~~~~~~~~~~~~l~---~li~~~l~~dP~~Rps~~~ll~h~  307 (348)
T 1u5q_A          270 SPALQSGHWSEYFR---NFVDSCLQKIPQDRPTSEVLLKHR  307 (348)
T ss_dssp             CCCCCCTTSCHHHH---HHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred             CCCCCCCCCCHHHH---HHHHHHcccChhhCcCHHHHhhCh
Confidence            11222222344444   477899999999999999998543


No 148
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=3.1e-43  Score=351.81  Aligned_cols=264  Identities=25%  Similarity=0.339  Sum_probs=197.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccCC-----hhhHHHHHHHHHHHhcCC---CCCeeeEEEEEee
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNNR-----GQAEKEFKVEVEAIGRVR---HKNLVRLLGYCAE  253 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~---hpniv~l~~~~~~  253 (521)
                      +..++|++.+.||+|+||+||+|.+ .+++.||+|++....     ......+.+|+++++.++   ||||+++++++..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~   85 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT   85 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence            3467899999999999999999996 468899999986432     112345667777777664   9999999999987


Q ss_pred             CC-----eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCc
Q 009979          254 GA-----HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP  328 (521)
Q Consensus       254 ~~-----~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~v  328 (521)
                      ..     ..++||||+. ++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           86 SRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             CCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred             cCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence            55     5789999997 59999998763  34589999999999999999999999   99999999999999999999


Q ss_pred             eEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH
Q 009979          329 KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM  408 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~  408 (521)
                      ||+|||+++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+...
T Consensus       160 kl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~  234 (308)
T 3g33_A          160 KLADFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE---ADQLGKIFDL  234 (308)
T ss_dssp             EECSCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH---HHHHHHHHHH
T ss_pred             EEeeCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHH
Confidence            99999999865432  223456799999999999999999999999999999999999999964331   1111111111


Q ss_pred             hhccccccC------CCcccCC---C----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          409 VTNRNAEGV------LDPRLQE---K----PCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       409 ~~~~~~~~~------~d~~l~~---~----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .........      ....+..   .    ..+.....+.+++.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            111000000      0000000   0    00112234556888999999999999999984


No 149
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=2.7e-42  Score=346.90  Aligned_cols=258  Identities=25%  Similarity=0.404  Sum_probs=203.7

Q ss_pred             ccccceEccCCcEEEEEEEEc-----CCcEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC--CeeeE
Q 009979          188 FADENVIGEGGYGIVYHGVLE-----DNTNVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG--AHRML  259 (521)
Q Consensus       188 ~~~~~~LG~G~fG~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~--~~~~l  259 (521)
                      |++.+.||+|+||+||++.+.     +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            488999999999999998753     578899999976533 3456789999999999999999999999874  67899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...     .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  184 (318)
T ss_dssp             EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence            99999999999999764     489999999999999999999999   9999999999999999999999999999987


Q ss_pred             CCCCcc--eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCC--------CcccHHHHHHHHh
Q 009979          340 GAERSY--VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPP--------GEVNLVEWLKTMV  409 (521)
Q Consensus       340 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~--------~~~~~~~~~~~~~  409 (521)
                      ......  ......||..|+|||++.+..++.++|||||||++|||+||+.||......        ........+....
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (318)
T 3lxp_A          185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL  264 (318)
T ss_dssp             CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHH
Confidence            544322  223456888999999999989999999999999999999999998632110        0000011111222


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ....     .... ...++.   .+.+++.+||+.||++|||+.++++.|+..
T Consensus       265 ~~~~-----~~~~-~~~~~~---~l~~li~~~l~~dP~~Rps~~ell~~L~~l  308 (318)
T 3lxp_A          265 ERGE-----RLPR-PDKCPA---EVYHLMKNCWETEASFRPTFENLIPILKTV  308 (318)
T ss_dssp             HTTC-----CCCC-CTTCCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hccc-----CCCC-CccccH---HHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence            1111     0011 112333   455588899999999999999999999864


No 150
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.9e-43  Score=362.94  Aligned_cols=200  Identities=26%  Similarity=0.425  Sum_probs=163.3

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCC--eee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGA--HRM  258 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~--~~~  258 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||||++...  .......+.+|+.+++.+. ||||+++++++...+  ..|
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            458999999999999999999975 6889999998643  3344566788999999997 999999999997544  689


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +|||||+ ++|.+++...     .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        88 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence            9999997 5999999763     688999999999999999999999   999999999999999999999999999987


Q ss_pred             cCCC--------------------CcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          339 LGAE--------------------RSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       339 ~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      +...                    .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence            5321                    1122345689999999999876 67999999999999999999999999754


No 151
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=8.6e-43  Score=345.75  Aligned_cols=260  Identities=28%  Similarity=0.428  Sum_probs=205.4

Q ss_pred             hhhhcCCCccccc-eEccCCcEEEEEEEEc---CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEee
Q 009979          180 ELEVSTNGFADEN-VIGEGGYGIVYHGVLE---DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAE  253 (521)
Q Consensus       180 ~~~~~~~~~~~~~-~LG~G~fG~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~  253 (521)
                      ++.+..++|.+.+ .||+|+||.||+|.+.   ++..||||.+.....  ...+.+.+|+++++.++||||+++++++ .
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            3445567888888 9999999999999653   367899999875432  2357799999999999999999999999 5


Q ss_pred             CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeec
Q 009979          254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDF  333 (521)
Q Consensus       254 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DF  333 (521)
                      ....++||||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+||
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Df  161 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDF  161 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccC
Confidence            56789999999999999999875    4689999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCccee--ecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhh
Q 009979          334 GLAKLLGAERSYVT--TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVT  410 (521)
Q Consensus       334 Gla~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~  410 (521)
                      |++...........  ....||+.|+|||.+.+..++.++||||||+++|||++ |+.||.....      .+... .+.
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~-~~~  234 (291)
T 1xbb_A          162 GLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SEVTA-MLE  234 (291)
T ss_dssp             TTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHH-HHH
T ss_pred             CcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH------HHHHH-HHH
Confidence            99988754433222  23456789999999988889999999999999999999 9999974432      11112 222


Q ss_pred             ccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          411 NRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       411 ~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      ....     +.+. ..++..   +.+++.+||+.||++||++.++++.|+..-
T Consensus       235 ~~~~-----~~~~-~~~~~~---l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          235 KGER-----MGCP-AGCPRE---MYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             TTCC-----CCCC-TTCCHH---HHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCC-----CCCC-CCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1111     1111 123333   445888999999999999999999998653


No 152
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=7.4e-43  Score=349.73  Aligned_cols=266  Identities=22%  Similarity=0.400  Sum_probs=200.8

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEc----CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLE----DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYC  251 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~  251 (521)
                      +.++.+..++|.+.+.||+|+||.||+|.+.    ++..||+|.+...  .....+.+..|+.+++.++||||+++++++
T Consensus        26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            5556677889999999999999999999864    2347999998654  233456789999999999999999999999


Q ss_pred             eeCC-----eeeEEEEeccCCchHHhhhcCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC
Q 009979          252 AEGA-----HRMLVYEYIDNGNLEQWLHGDV--GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK  324 (521)
Q Consensus       252 ~~~~-----~~~lV~e~~~~g~L~~~l~~~~--~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~  324 (521)
                      .+..     ..++||||+++|+|.+++....  .....+++..++.++.|++.||.|||+.   +|+||||||+|||++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRD  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECT
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcC
Confidence            7755     3499999999999999985432  2346799999999999999999999998   9999999999999999


Q ss_pred             CCCceEeecccceecCCCCcc-eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHH
Q 009979          325 QWNPKLSDFGLAKLLGAERSY-VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLV  402 (521)
Q Consensus       325 ~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~  402 (521)
                      ++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......   ...
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~  259 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMY  259 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---HHH
Confidence            999999999999876433221 2233567889999999999999999999999999999999 89999654322   111


Q ss_pred             HHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          403 EWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       403 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                         ........      +... ..++.   .+.+++.+||+.||.+||++.+++++|+..
T Consensus       260 ---~~~~~~~~------~~~~-~~~~~---~l~~li~~~l~~dp~~Rps~~~l~~~L~~l  306 (313)
T 3brb_A          260 ---DYLLHGHR------LKQP-EDCLD---ELYEIMYSCWRTDPLDRPTFSVLRLQLEKL  306 (313)
T ss_dssp             ---HHHHTTCC------CCCB-TTCCH---HHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---HHHHcCCC------CCCC-ccccH---HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence               11111110      1111 11233   445588899999999999999999999864


No 153
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.6e-44  Score=357.86  Aligned_cols=260  Identities=26%  Similarity=0.392  Sum_probs=188.0

Q ss_pred             CCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCeeeEEEEEeeCC----eeeE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGR--VRHKNLVRLLGYCAEGA----HRML  259 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~hpniv~l~~~~~~~~----~~~l  259 (521)
                      ++|.+.+.||+|+||.||+|.+. ++.||||++...   ....+..|.+++..  ++||||+++++++....    ..++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   78 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred             ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence            47899999999999999999874 889999998543   34566778888887  78999999999998776    7899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeeecCCCCCCeEeCCCCCceEe
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH--------EGLEPKVVHRDIKSSNILLDKQWNPKLS  331 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--------~~~~~~iiHrDik~~NILl~~~~~vkL~  331 (521)
                      ||||+++|+|.++++..     .+++..++.++.|++.||+|||        +.   +|+||||||+|||++.++.+||+
T Consensus        79 v~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~  150 (303)
T 3gxj_A           79 VSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred             EEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEe
Confidence            99999999999999754     5777888999999999999999        77   99999999999999999999999


Q ss_pred             ecccceecCCCCcce---eecccccccccccccccCC------CCCCcccchhHHHHHHHHHhC----------CCCCCC
Q 009979          332 DFGLAKLLGAERSYV---TTRVMGTFGYVAPEYASTG------MLNERSDVYSFGILIMEVISG----------RNPVDY  392 (521)
Q Consensus       332 DFGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~sDvwS~Gvvl~elltG----------~~Pf~~  392 (521)
                      |||+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||+||          ..||..
T Consensus       151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred             ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence            999998664433221   2334799999999998776      444689999999999999999          677754


Q ss_pred             CCCCCcccHHHHHHHHhhccccccCCCcccCCC-ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          393 SRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEK-PCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      ..+.... ..+ +......    ....+.+... ........+.+++.+||+.||++|||+.+|++.|+...
T Consensus       231 ~~~~~~~-~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~  296 (303)
T 3gxj_A          231 LVPSDPS-VEE-MRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             TCC-CCC-CC--CHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred             cCCCCcc-HHH-HHHHHHH----hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence            3221111 011 1111111    1122222211 12245556777999999999999999999999998754


No 154
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=1.7e-42  Score=340.29  Aligned_cols=251  Identities=27%  Similarity=0.389  Sum_probs=202.4

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.++...++||||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            47889999999999999999976 68899999986443 34457789999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      +++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||++.......
T Consensus        87 ~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           87 CSGGELFDRIEPD----IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             CTTEEGGGGSBTT----TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             cCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence            9999999998754    5689999999999999999999998   99999999999999999999999999998754322


Q ss_pred             c-ceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          344 S-YVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       344 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      . .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........ ..    .......   ....  
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----~~~~~~~---~~~~--  229 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-EY----SDWKEKK---TYLN--  229 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-HH----HHHHTTC---TTST--
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-HH----HHhhhcc---cccC--
Confidence            1 22344679999999999987665 7799999999999999999999975443211 11    1111110   0010  


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                          ........+.+++.+||+.||++|||+.++++
T Consensus       230 ----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          230 ----PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                01112233455888999999999999999975


No 155
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.4e-42  Score=343.45  Aligned_cols=255  Identities=29%  Similarity=0.455  Sum_probs=200.2

Q ss_pred             CCccccceEccCCcEEEEEEEEcC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEe-eCCeeeE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLED----NTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCA-EGAHRML  259 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~-~~~~~~l  259 (521)
                      .+|++.+.||+|+||.||+|.+.+    ...||+|.+.... ....+.+.+|+.++++++||||+++++++. .+...++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            468889999999999999998643    2258999887543 344577899999999999999999999864 4567899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence            99999999999999764   35689999999999999999999999   9999999999999999999999999999876


Q ss_pred             CCCCc---ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          340 GAERS---YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       340 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      .....   .......||+.|+|||.+.+..++.++||||||+++|||++ |..||.......   ..   .......   
T Consensus       179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~---~~~~~~~---  249 (298)
T 3f66_A          179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---IT---VYLLQGR---  249 (298)
T ss_dssp             SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HH---HHHHTTC---
T ss_pred             cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HH---HHHhcCC---
Confidence            44322   12234567889999999999999999999999999999999 555665433221   11   1111111   


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .    ......++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       250 ~----~~~~~~~~~~---l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          250 R----LLQPEYCPDP---LYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             C----CCCCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C----CCCCccCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            0    1111223333   44588899999999999999999999864


No 156
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=1.1e-42  Score=343.20  Aligned_cols=250  Identities=23%  Similarity=0.338  Sum_probs=200.6

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG------QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ++|++.+.||+|+||.||+|... +++.||+|.+.....      ...+.+.+|+.+++.++||||+++++++.+....+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            46889999999999999999986 588999999865432      23578999999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC----CceEeecc
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW----NPKLSDFG  334 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~----~vkL~DFG  334 (521)
                      +||||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+||+++.++    .+||+|||
T Consensus        85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg  157 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG  157 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence            999999999999999764    4689999999999999999999998   999999999999998877    89999999


Q ss_pred             cceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ++.......  ......||+.|+|||++.+..++.++||||||+++|+|++|+.||....      ..+.+.......  
T Consensus       158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~--  227 (283)
T 3bhy_A          158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET------KQETLTNISAVN--  227 (283)
T ss_dssp             TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTC--
T ss_pred             cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHHHHHhHhcc--
Confidence            998764332  2234579999999999999999999999999999999999999996432      122222221110  


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                       ...++..    .......+.+++.+||+.||++||++.++++
T Consensus       228 -~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          228 -YDFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -CCCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -cCCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence             0001100    1111234555888999999999999999986


No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=2.7e-42  Score=364.75  Aligned_cols=256  Identities=24%  Similarity=0.301  Sum_probs=194.5

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC------C
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG------A  255 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~------~  255 (521)
                      .++|++.+.||+|+||+||+|.+. +++.||||++...  .....+.+.+|+.+|+.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            468999999999999999999965 5888999999754  334456788999999999999999999999654      3


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..||||||+++ +|.+.+..      .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~  210 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  210 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred             eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence            56999999976 67776643      488999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhh-----
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT-----  410 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-----  410 (521)
                      ++.....  ...+..+||+.|+|||++.+..|+.++|||||||++|||++|+.||...+.      .+.+..++.     
T Consensus       211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~------~~~~~~i~~~lg~p  282 (464)
T 3ttj_A          211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY------IDQWNKVIEQLGTP  282 (464)
T ss_dssp             C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCSC
T ss_pred             eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHhcCCC
Confidence            9876432  234557899999999999999999999999999999999999999965431      111111111     


Q ss_pred             -----------------cccc-c-----cCCCccc-CCC--ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          411 -----------------NRNA-E-----GVLDPRL-QEK--PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       411 -----------------~~~~-~-----~~~d~~l-~~~--~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                                       .... .     ......+ ...  ........+.+|+.+||+.||++|||+.|++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             CHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                             0000 0     0000000 000  001124457779999999999999999999864


No 158
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=7.3e-43  Score=353.91  Aligned_cols=242  Identities=21%  Similarity=0.360  Sum_probs=200.3

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--------QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      ++|++.+.||+|+||.||+|.+. +++.||||.+.....        .....+..|+++++.++||||+++++++.+...
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            47999999999999999999965 688899999876432        123456779999999999999999999999999


Q ss_pred             eeEEEEeccCC-chHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          257 RMLVYEYIDNG-NLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       257 ~~lV~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      .++||||+.+| +|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeeccc
Confidence            99999999777 999999865    4699999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ++.......  .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......                 .
T Consensus       177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------------~  237 (335)
T 3dls_A          177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------------V  237 (335)
T ss_dssp             CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------------T
T ss_pred             ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------------H
Confidence            997654332  334679999999999988776 78999999999999999999999632110                 0


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      .....   .....+..   +.+++.+||+.||++|||+.++++.-
T Consensus       238 ~~~~~---~~~~~~~~---l~~li~~~L~~dP~~Rps~~ell~hp  276 (335)
T 3dls_A          238 EAAIH---PPYLVSKE---LMSLVSGLLQPVPERRTTLEKLVTDP  276 (335)
T ss_dssp             TTCCC---CSSCCCHH---HHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred             hhccC---CCcccCHH---HHHHHHHHccCChhhCcCHHHHhcCc
Confidence            01111   11113333   44588899999999999999998753


No 159
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=9.3e-43  Score=358.25  Aligned_cols=255  Identities=29%  Similarity=0.461  Sum_probs=193.5

Q ss_pred             CccccceEccCCcEEEEEEEEc--CC--cEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEee-CCeeeEE
Q 009979          187 GFADENVIGEGGYGIVYHGVLE--DN--TNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE-GAHRMLV  260 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~-~~~~~lV  260 (521)
                      .|.+.+.||+|+||.||+|.+.  ++  ..||+|.+.... ....+.+.+|+.++++++||||+++++++.+ +...++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4778899999999999999864  22  358999886533 3445789999999999999999999998754 4578999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++|+|.++++..   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence            9999999999999765   35688999999999999999999999   99999999999999999999999999998664


Q ss_pred             CCCcc---eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          341 AERSY---VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       341 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      .....   ......||+.|+|||++.+..++.++|||||||++|||+| |..||.......   ....   .....   .
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~~---~~~~~---~  314 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVY---LLQGR---R  314 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHHH---HHTTC---C
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHHH---HHcCC---C
Confidence            33211   1234567889999999999999999999999999999999 677886543321   2211   11111   1


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      .    ..+..++..   +.+++.+||+.||++||++.++++.|+...
T Consensus       315 ~----~~p~~~~~~---l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          315 L----LQPEYCPDP---LYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             C----CCCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C----CCCCCCCHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1    111224444   445888999999999999999999998653


No 160
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=3.2e-42  Score=343.82  Aligned_cols=250  Identities=20%  Similarity=0.323  Sum_probs=201.1

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      ++|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            47899999999999999999975 68899999998665555577889999999999999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceecCC
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~~~  341 (521)
                      ++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||+   ++++.+||+|||+++....
T Consensus        89 ~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           89 SGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             CSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             CCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            999999998764    4689999999999999999999999   99999999999999   7889999999999976432


Q ss_pred             CCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcc
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPR  421 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  421 (521)
                      .   ......||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+......... . . ....
T Consensus       162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~-~-~-~~~~  229 (304)
T 2jam_A          162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET------ESKLFEKIKEGY-Y-E-FESP  229 (304)
T ss_dssp             B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHCC-C-C-CCTT
T ss_pred             C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCC-C-C-CCcc
Confidence            2   2234579999999999999999999999999999999999999996432      112222222211 0 0 0111


Q ss_pred             cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          422 LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       422 l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .. ...+.   .+.+++.+||+.||++||++.+++++
T Consensus       230 ~~-~~~~~---~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          230 FW-DDISE---SAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             TT-TTSCH---HHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cc-ccCCH---HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11 11233   34558889999999999999999853


No 161
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=6e-43  Score=381.92  Aligned_cols=258  Identities=27%  Similarity=0.438  Sum_probs=202.6

Q ss_pred             hhcCCCccccc-eEccCCcEEEEEEEEc---CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          182 EVSTNGFADEN-VIGEGGYGIVYHGVLE---DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~-~LG~G~fG~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      .+..+++.+.+ .||+|+||.||+|.+.   ++..||||++.... ....+.+.+|+++|+.++||||++++++|.. ..
T Consensus       331 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~  409 (613)
T 2ozo_A          331 FLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA  409 (613)
T ss_dssp             BCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS
T ss_pred             eccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC
Confidence            44555666666 8999999999999864   45679999997643 3356789999999999999999999999976 56


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .+|||||+++|+|.+++...   ...+++..++.++.|++.||+|||++   +|+||||||+||||+.++.+||+|||++
T Consensus       410 ~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla  483 (613)
T 2ozo_A          410 LMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLS  483 (613)
T ss_dssp             EEEEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTT
T ss_pred             eEEEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCc
Confidence            89999999999999999765   45799999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCccee--ecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          337 KLLGAERSYVT--TRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       337 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      +..........  ....+|+.|+|||++.+..++.++|||||||+||||+| |+.||......      +.... +..+.
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~~~~~-i~~~~  556 (613)
T 2ozo_A          484 KALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------EVMAF-IEQGK  556 (613)
T ss_dssp             TTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH------HHHHH-HHTTC
T ss_pred             ccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHH-HHcCC
Confidence            87643332222  22345789999999999999999999999999999998 99999754321      11222 22111


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .     ... ...++..   +.+++.+||+.||++||++.+|++.|+..
T Consensus       557 ~-----~~~-p~~~~~~---l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          557 R-----MEC-PPECPPE---LYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             C-----CCC-CTTCCHH---HHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             C-----CCC-CCcCCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            0     011 1123444   44588899999999999999999999863


No 162
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=7.8e-43  Score=352.45  Aligned_cols=257  Identities=27%  Similarity=0.466  Sum_probs=198.8

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcE----EEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTN----VAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ..++|++.+.||+|+||.||+|.+. +++.    ||+|.+... .....+.+.+|+.+++.++||||+++++++..+. .
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~   91 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V   91 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence            4568999999999999999999965 3443    577776543 3345578899999999999999999999998765 7


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+.+|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        92 ~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           92 QLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             eEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            8999999999999999875   35789999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          338 LLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       338 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ....... .......||+.|+|||.+.+..++.++|||||||++|||++ |+.||......   .....    +....  
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---~~~~~----~~~~~--  236 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSI----LEKGE--  236 (327)
T ss_dssp             --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHHH----HHTTC--
T ss_pred             EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHHH----HHcCC--
Confidence            7643322 22233457889999999999999999999999999999999 99999754322   22211    11111  


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                         ... ....++..   +.+++.+||+.||.+||++.++++.|+...
T Consensus       237 ---~~~-~~~~~~~~---l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          237 ---RLP-QPPICTID---VYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             ---CCC-CCTTBCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---CCC-CCccCCHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence               000 11123333   445888999999999999999999998654


No 163
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=8.6e-43  Score=351.56  Aligned_cols=261  Identities=22%  Similarity=0.351  Sum_probs=194.0

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhh-HHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQA-EKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      ++|.+.+.||+|+||+||+|... +++.||+|++....... ...+.+|+++++.++||||+++++++.+....++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999976 68899999986543221 12445699999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      ++ |+|.+++...   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  154 (324)
T 3mtl_A           82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT  154 (324)
T ss_dssp             CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred             cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence            97 5999998875   35689999999999999999999999   99999999999999999999999999998654322


Q ss_pred             cceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc---cCC-
Q 009979          344 SYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE---GVL-  418 (521)
Q Consensus       344 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-  418 (521)
                       .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....   ......+..........   ... 
T Consensus       155 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~  230 (324)
T 3mtl_A          155 -KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV---EEQLHFIFRILGTPTEETWPGILS  230 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             -cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCChHhchhhhc
Confidence             22334578999999999876 5689999999999999999999999975432   12222222221111000   000 


Q ss_pred             --------CcccCCCc----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          419 --------DPRLQEKP----CSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       419 --------d~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                              .+......    .+.....+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                    00000000    0111234556888999999999999999985


No 164
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=4.9e-42  Score=362.52  Aligned_cols=194  Identities=24%  Similarity=0.368  Sum_probs=155.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC-----Ce
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG-----AH  256 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~-----~~  256 (521)
                      .++|++.+.||+|+||+||+|.+. +++.||||++...  .....+.+.+|+++|+.++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            358999999999999999999965 6889999998653  333456788999999999999999999999443     56


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .|+||||+ +++|.+++...    ..+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||++
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla  203 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP----VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA  203 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEecc-ccchhhhcccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence            89999998 56999999764    5799999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCc--------------------------ceeecccccccccccccc-cCCCCCCcccchhHHHHHHHHHhC
Q 009979          337 KLLGAERS--------------------------YVTTRVMGTFGYVAPEYA-STGMLNERSDVYSFGILIMEVISG  386 (521)
Q Consensus       337 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~elltG  386 (521)
                      +.......                          ...+..+||+.|+|||++ ....++.++|||||||+||||++|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            87642211                          123456789999999976 567799999999999999999993


No 165
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=4e-43  Score=358.00  Aligned_cols=261  Identities=16%  Similarity=0.186  Sum_probs=203.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEcC---------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeee---------
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLED---------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVR---------  246 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~---------  246 (521)
                      .++|.+.+.||+|+||.||+|.+..         ++.||+|.+...     +.+.+|+++++.++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4689999999999999999999763         788999998654     45778999999999999887         


Q ss_pred             ------EEEEEee-CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 009979          247 ------LLGYCAE-GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSN  319 (521)
Q Consensus       247 ------l~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~N  319 (521)
                            +++++.. +...++||||+ +++|.+++....  ...+++..++.++.|++.||+|||++   +|+||||||+|
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N  189 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN  189 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence                  6777776 67889999999 999999998652  35799999999999999999999999   99999999999


Q ss_pred             eEeCCCC--CceEeecccceecCCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCC
Q 009979          320 ILLDKQW--NPKLSDFGLAKLLGAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD  391 (521)
Q Consensus       320 ILl~~~~--~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~  391 (521)
                      ||++.++  .+||+|||+++.+......      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus       190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~  269 (352)
T 2jii_A          190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT  269 (352)
T ss_dssp             EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            9999988  8999999999876433221      1234579999999999999999999999999999999999999997


Q ss_pred             CCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          392 YSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...... ............  ....+.+........+..   +.+++.+||+.||++||++.++++.|+..
T Consensus       270 ~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---l~~li~~~l~~dp~~Rps~~~l~~~L~~~  334 (352)
T 2jii_A          270 NCLPNT-EDIMKQKQKFVD--KPGPFVGPCGHWIRPSET---LQKYLKVVMALTYEEKPPYAMLRNNLEAL  334 (352)
T ss_dssp             GGTTCH-HHHHHHHHHHHH--SCCCEECTTSCEECCCHH---HHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             cCCcCH-HHHHHHHHhccC--ChhhhhhhccccCCCcHH---HHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence            554221 112222221111  111111111111112333   44588899999999999999999999864


No 166
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=8e-43  Score=343.33  Aligned_cols=256  Identities=24%  Similarity=0.335  Sum_probs=203.5

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEee--CCeeeEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE--GAHRMLV  260 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~--~~~~~lV  260 (521)
                      ++|++.+.||+|+||.||+|... +++.||+|.+....  ....+.+..|+++++.++||||+++++++.+  ....++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            57899999999999999999976 68889999987543  3345678899999999999999999998854  5678999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eeecCCCCCCeEeCCCCCceEeeccc
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-----VVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~-----iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      |||+++++|.+++.........+++..++.++.|++.||+|||+.   +     |+||||||+|||++.++.+||+|||+
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            999999999999976533345699999999999999999999998   7     99999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ++....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....      ..+....... ....
T Consensus       163 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~-~~~~  234 (279)
T 2w5a_A          163 ARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIRE-GKFR  234 (279)
T ss_dssp             HHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH-TCCC
T ss_pred             heeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHHHHHHhh-cccc
Confidence            987643322 2234578999999999999899999999999999999999999996442      1122222221 1111


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                           .+.. ..+..   +.+++.+||+.||++||++.++++.+..
T Consensus       235 -----~~~~-~~~~~---l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          235 -----RIPY-RYSDE---LNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             -----CCCT-TSCHH---HHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             -----cCCc-ccCHH---HHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence                 1111 12333   4458889999999999999999977653


No 167
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.6e-42  Score=357.85  Aligned_cols=271  Identities=21%  Similarity=0.257  Sum_probs=211.2

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC--eeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA--HRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~--~~~l  259 (521)
                      ..++|.+.+.||+|+||+||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++....  ..++
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence            3568999999999999999999976 48899999987543 233567788999999999999999999998765  6799


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----CCCCCceEeeccc
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL----DKQWNPKLSDFGL  335 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl----~~~~~vkL~DFGl  335 (521)
                      ||||+++|+|.+++..... ...+++..++.++.|++.||+|||+.   +|+||||||+|||+    +.++.+||+|||+
T Consensus        87 v~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             EECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             EEecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            9999999999999976522 23489999999999999999999999   99999999999999    7778899999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC--------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST--------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ++......  ......||+.|+|||++.+        ..++.++|||||||++|||++|+.||.........  .+.+..
T Consensus       163 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~--~~~~~~  238 (396)
T 4eut_A          163 ARELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYK  238 (396)
T ss_dssp             CEECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC--HHHHHH
T ss_pred             ceEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch--HHHHHH
Confidence            99765432  2334679999999998864        56788999999999999999999999754432221  222333


Q ss_pred             Hhhccccc------cCCC--------cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          408 MVTNRNAE------GVLD--------PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       408 ~~~~~~~~------~~~d--------~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ........      ....        ..............+..++.+||+.||++||++.++++.++..
T Consensus       239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i  307 (396)
T 4eut_A          239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (396)
T ss_dssp             HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence            33221100      0000        0011112344555666799999999999999999999888654


No 168
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.6e-42  Score=348.22  Aligned_cols=264  Identities=22%  Similarity=0.395  Sum_probs=208.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-----cCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC--e
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-----EDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA--H  256 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~--~  256 (521)
                      ..++|++.+.||+|+||.||+|.+     .+++.||+|++........+.+.+|+++++.++||||+++++++....  .
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            345789999999999999999984     357889999998776666788999999999999999999999987654  6


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             eEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence            79999999999999999875   34689999999999999999999998   9999999999999999999999999999


Q ss_pred             eecCCCCcce--eecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCC---------CCCcccHHHHH
Q 009979          337 KLLGAERSYV--TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSR---------PPGEVNLVEWL  405 (521)
Q Consensus       337 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~---------~~~~~~~~~~~  405 (521)
                      +.........  .....+|..|+|||.+.+..++.++|||||||++|||+||..||....         ..........+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence            9875443322  223457888999999998889999999999999999999999985321         00001111111


Q ss_pred             HHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          406 KTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       406 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...+.....     ... ...++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       273 ~~~~~~~~~-----~~~-~~~~~~~---l~~li~~cl~~dP~~Rps~~el~~~L~~l  320 (326)
T 2w1i_A          273 IELLKNNGR-----LPR-PDGCPDE---IYMIMTECWNNNVNQRPSFRDLALRVDQI  320 (326)
T ss_dssp             HHHHHTTCC-----CCC-CTTCCHH---HHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHhhcCCC-----CCC-CCcccHH---HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            122211110     001 1123333   44588899999999999999999999864


No 169
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2.7e-42  Score=352.83  Aligned_cols=203  Identities=26%  Similarity=0.421  Sum_probs=177.8

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ++..++|++.+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  108 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI  108 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence            345678999999999999999999976 6888999998765 33445778999999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++++|.+++...    ..+++..+..++.|++.||+|||+..  +|+||||||+|||++.++.+||+|||++...
T Consensus       109 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          109 CMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             EECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            99999999999999865    46899999999999999999999831  7999999999999999999999999999765


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      ...   ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          183 IDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             HHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             ccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            321   233457999999999999999999999999999999999999999643


No 170
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.4e-42  Score=340.48  Aligned_cols=255  Identities=26%  Similarity=0.400  Sum_probs=200.8

Q ss_pred             CccccceEccCCcEEEEEEEEcC-Cc---EEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee-eEE
Q 009979          187 GFADENVIGEGGYGIVYHGVLED-NT---NVAVKNLLNNRG-QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR-MLV  260 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~~-~~---~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~-~lV  260 (521)
                      .|...+.||+|+||+||+|.+.+ +.   .||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.... ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            45667999999999999998643 22   699999875433 4457788999999999999999999999876655 899


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+.+|+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...
T Consensus       102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999999999999874   35789999999999999999999999   99999999999999999999999999998654


Q ss_pred             CCCc---ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          341 AERS---YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       341 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      ....   .......||+.|+|||.+.+..++.++|||||||++|+|++|..|+.....  .......+.   ....    
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~---~~~~----  246 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTHFLA---QGRR----  246 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHHHHH---TTCC----
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHHHhh---cCCC----
Confidence            3321   122345688999999999999999999999999999999996665432221  112222111   1110    


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                        .. ....++..   +.+++.+||+.||.+|||+.++++.|+..
T Consensus       247 --~~-~~~~~~~~---l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          247 --LP-QPEYCPDS---LYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             --CC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CC-CCccchHH---HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence              00 11123333   44588899999999999999999999864


No 171
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.6e-42  Score=362.14  Aligned_cols=253  Identities=22%  Similarity=0.368  Sum_probs=191.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--------QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      .++|.+.+.||+|+||+||+|.+. +++.||||++.....        .....+.+|+++|++++||||+++++++.. .
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~  212 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E  212 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence            568999999999999999999975 578999999865321        112347889999999999999999999854 5


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC---CCceEee
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ---WNPKLSD  332 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~---~~vkL~D  332 (521)
                      ..++||||+++|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.+   +.+||+|
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D  285 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD  285 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred             ceEEEEEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence            679999999999999998764    5789999999999999999999998   99999999999999654   4599999


Q ss_pred             cccceecCCCCcceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       333 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      ||+++.....  ......+||+.|+|||++.   ...++.++|||||||++|||++|+.||......  ..+.+.+    
T Consensus       286 FG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~~i----  357 (419)
T 3i6u_A          286 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKDQI----  357 (419)
T ss_dssp             SSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHHHH----
T ss_pred             cccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHHHH----
Confidence            9999876432  2334568999999999985   367888999999999999999999999754332  1222211    


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      ......  ..+..    .......+.+++.+||+.||++||++.|++++-
T Consensus       358 ~~~~~~--~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp  401 (419)
T 3i6u_A          358 TSGKYN--FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRHP  401 (419)
T ss_dssp             HTTCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             hcCCCC--CCchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence            111100  00000    111233455688899999999999999998653


No 172
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=2.3e-42  Score=348.64  Aligned_cols=257  Identities=25%  Similarity=0.420  Sum_probs=202.3

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcE--EEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTN--VAVKNLLNNR-GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~l  259 (521)
                      .++|++.+.||+|+||.||+|.+. ++..  +|+|.+.... ....+.+..|+++++++ +||||+++++++.+....++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            357899999999999999999965 4554  4899886532 33446788999999999 89999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC
Q 009979          260 VYEYIDNGNLEQWLHGDV------------GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN  327 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~  327 (521)
                      ||||+++|+|.+++....            .....+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~  180 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV  180 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence            999999999999998653            2235799999999999999999999998   9999999999999999999


Q ss_pred             ceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHH
Q 009979          328 PKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLK  406 (521)
Q Consensus       328 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~  406 (521)
                      +||+|||+++.....  .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||....      ..+...
T Consensus       181 ~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~  252 (327)
T 1fvr_A          181 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYE  252 (327)
T ss_dssp             EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHH
T ss_pred             EEEcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc------HHHHHH
Confidence            999999999853221  12233457889999999998889999999999999999998 999996442      122222


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .... .     ...... ..++.   .+.+++.+||+.||.+||++.++++.|+..
T Consensus       253 ~~~~-~-----~~~~~~-~~~~~---~l~~li~~~l~~dp~~Rps~~ell~~L~~~  298 (327)
T 1fvr_A          253 KLPQ-G-----YRLEKP-LNCDD---EVYDLMRQCWREKPYERPSFAQILVSLNRM  298 (327)
T ss_dssp             HGGG-T-----CCCCCC-TTBCH---HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             Hhhc-C-----CCCCCC-CCCCH---HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            2211 1     011111 11333   344588899999999999999999999753


No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=1.2e-42  Score=351.33  Aligned_cols=258  Identities=20%  Similarity=0.330  Sum_probs=191.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ--AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||+||+|.+. +++.||||++......  ..+.+.+|+++++.++||||+++++++.++...++||
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  112 (329)
T 3gbz_A           33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF  112 (329)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence            357999999999999999999965 6888999998654322  2356778999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-----CCCCceEeecccc
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-----KQWNPKLSDFGLA  336 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-----~~~~vkL~DFGla  336 (521)
                      ||+++ +|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++     +++.+||+|||++
T Consensus       113 e~~~~-~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a  184 (329)
T 3gbz_A          113 EYAEN-DLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA  184 (329)
T ss_dssp             ECCSE-EHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred             ecCCC-CHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence            99974 999999875    4689999999999999999999999   999999999999994     4556999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc---c
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN---R  412 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~---~  412 (521)
                      +...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....      .+.+......   .
T Consensus       185 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~~~~~~~~~  257 (329)
T 3gbz_A          185 RAFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE------IDQLFKIFEVLGLP  257 (329)
T ss_dssp             HHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCC
T ss_pred             cccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH------HHHHHHHHHHhCCC
Confidence            8764332 223445789999999998774 589999999999999999999999964321      1111211110   0


Q ss_pred             cccc-----------CCCcccCCCccHH-----HHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          413 NAEG-----------VLDPRLQEKPCSR-----ALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       413 ~~~~-----------~~d~~l~~~~~~~-----~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ....           ...+.+.......     ....+.+++.+||+.||++|||+.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            0000           0000011110010     1234566888999999999999999985


No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=2.8e-42  Score=340.63  Aligned_cols=247  Identities=24%  Similarity=0.387  Sum_probs=203.5

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|.+.+.||+|+||.||+|... ++..||+|.+....   ......+.+|+++++.++||||+++++++.+....++
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence            3457999999999999999999976 57789999986532   2234678899999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus        92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           92 MLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             EECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            99999999999999765    4689999999999999999999998   9999999999999999999999999999865


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ....   .....||+.|+|||++.+..++.++||||||+++|+|++|+.||....      ..+........       +
T Consensus       165 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~-------~  228 (284)
T 2vgo_A          165 PSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS------HTETHRRIVNV-------D  228 (284)
T ss_dssp             SSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTT-------C
T ss_pred             cccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC------HhHHHHHHhcc-------c
Confidence            4322   234579999999999999999999999999999999999999996432      12222222211       1


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ..+.. ..+.   .+.+++.+||+.||.+||++.++++
T Consensus       229 ~~~~~-~~~~---~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          229 LKFPP-FLSD---GSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             CCCCT-TSCH---HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCCC-cCCH---HHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            11111 1233   3445888999999999999999984


No 175
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=4.7e-42  Score=340.44  Aligned_cols=256  Identities=28%  Similarity=0.452  Sum_probs=200.6

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ...+.|.....||+|+||.||+|.+. ++..||+|.+........+.+.+|+.+++.++||||+++++++.+....++||
T Consensus        19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEE
Confidence            34456677779999999999999975 57889999997766666678999999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC-CCCceEeecccceecC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK-QWNPKLSDFGLAKLLG  340 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~-~~~vkL~DFGla~~~~  340 (521)
                      ||+++++|.+++..... ...+++..+..++.|++.||+|||+.   +|+||||||+|||++. ++.+||+|||+++...
T Consensus        99 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             ECCSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             EeCCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            99999999999986532 34567899999999999999999998   9999999999999987 8999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCC--CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGM--LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      .... ......||+.|+|||++.+..  ++.++||||||+++|||++|+.||......    ..........      ..
T Consensus       175 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~------~~  243 (295)
T 2clq_A          175 GINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP----QAAMFKVGMF------KV  243 (295)
T ss_dssp             C------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH----HHHHHHHHHH------CC
T ss_pred             CCCC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch----hHHHHhhccc------cc
Confidence            3322 233457999999999987643  889999999999999999999999643211    1111111111      01


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .+.+.. ..+.   .+.+++.+||+.||++||++.++++
T Consensus       244 ~~~~~~-~~~~---~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 HPEIPE-SMSA---EAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCCCT-TSCH---HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccccc-cCCH---HHHHHHHHHccCChhhCCCHHHHhc
Confidence            111211 1233   3445888999999999999999974


No 176
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=7e-42  Score=358.67  Aligned_cols=199  Identities=26%  Similarity=0.377  Sum_probs=168.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC-----Ce
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG-----AH  256 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~-----~~  256 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||||++...  .....+.+.+|+++|+.++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            458999999999999999999975 5788999999653  333456788999999999999999999999776     56


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .|+||||++ |+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~----~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP----IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEecCC-cCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence            899999986 5999999764    5699999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCc---------------------ceeecccccccccccccc-cCCCCCCcccchhHHHHHHHHHhCCCCCC
Q 009979          337 KLLGAERS---------------------YVTTRVMGTFGYVAPEYA-STGMLNERSDVYSFGILIMEVISGRNPVD  391 (521)
Q Consensus       337 ~~~~~~~~---------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwS~Gvvl~elltG~~Pf~  391 (521)
                      +.......                     ...+..+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            97643321                     123567899999999985 56679999999999999999998666554


No 177
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=3.7e-43  Score=345.89  Aligned_cols=254  Identities=28%  Similarity=0.416  Sum_probs=198.0

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC-CeeeE
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG-AHRML  259 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~-~~~~l  259 (521)
                      +.+..++|++.+.||+|+||.||+|.+. ++.||+|.+....  ..+.+.+|+++++.++||||+++++++.+. ...++
T Consensus        16 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l   92 (278)
T 1byg_A           16 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI   92 (278)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred             ccCChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence            3455678999999999999999999885 8899999986543  456788999999999999999999997654 47899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||+++++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++...
T Consensus        93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  167 (278)
T 1byg_A           93 VTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  167 (278)
T ss_dssp             EECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred             EEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccc
Confidence            999999999999997641  22478899999999999999999998   9999999999999999999999999999865


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      ...    .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||......   ...   ..... .     .
T Consensus       168 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~---~~~~~-~-----~  231 (278)
T 1byg_A          168 SST----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVV---PRVEK-G-----Y  231 (278)
T ss_dssp             ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG---GHH---HHHTT-T-----C
T ss_pred             ccc----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH---HHH---HHHhc-C-----C
Confidence            332    223467899999999998999999999999999999998 99999754321   111   11111 1     0


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .+... ..++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       232 ~~~~~-~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          232 KMDAP-DGCPPA---VYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             CCCCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCc-ccCCHH---HHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            11111 113333   44588899999999999999999999764


No 178
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.8e-42  Score=342.45  Aligned_cols=249  Identities=20%  Similarity=0.336  Sum_probs=204.5

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||+|.+...   .....+.+..|+.+++.++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            457899999999999999999976 4778999988654   234456788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||++....
T Consensus        94 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A           94 LELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             EECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            9999999999998764    4689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      .... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....      ..+.........       .
T Consensus       167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~-------~  232 (294)
T 2rku_A          167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNE-------Y  232 (294)
T ss_dssp             STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTC-------C
T ss_pred             cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhhcc-------C
Confidence            3222 2334679999999999999999999999999999999999999996432      122222222111       0


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .+.. ..+.   .+.+++.+||+.||++|||+.++++.
T Consensus       233 ~~~~-~~~~---~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          233 SIPK-HINP---VAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             CCCT-TSCH---HHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             CCcc-ccCH---HHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1111 1223   34458889999999999999999854


No 179
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=5.9e-42  Score=365.38  Aligned_cols=249  Identities=22%  Similarity=0.350  Sum_probs=197.6

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ++|.+.+.||+|+||+||+|.+. ++..||+|++....  ......+.+|+.+++.++||||+++++++.+....|+|||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            47999999999999999999976 68889999987543  2335778899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC---CCceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ---WNPKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~---~~vkL~DFGla~~~  339 (521)
                      ||++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++..   +.+||+|||+++..
T Consensus       117 ~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          117 CYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             cCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            99999999988765    4689999999999999999999999   99999999999999764   45999999999876


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ....  ......||+.|+|||++. ..++.++|||||||++|+|++|+.||....      ..+.+........  ....
T Consensus       190 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~--~~~~  258 (494)
T 3lij_A          190 ENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEILRKVEKGKY--TFDS  258 (494)
T ss_dssp             BTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCC--CCCS
T ss_pred             CCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC--CCCc
Confidence            5432  234567999999999886 569999999999999999999999996433      2222232222111  1111


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      +...  ..+   ..+.+++.+||+.||.+|||+.++++
T Consensus       259 ~~~~--~~s---~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          259 PEWK--NVS---EGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             GGGT--TSC---HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhcc--cCC---HHHHHHHHHHCCCChhhCccHHHHhc
Confidence            1111  122   33455888999999999999999984


No 180
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2e-42  Score=350.53  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=204.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|.+.+.||+|+||.||++.+. +++.||+|.+...   .....+.+..|+.+++.++||||+++++++.+....++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            457999999999999999999976 4778999998654   234457788999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++...
T Consensus       120 ~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          120 LELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             ECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            9999999999998764    4689999999999999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCc
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDP  420 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  420 (521)
                      ... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....      ..+.........       .
T Consensus       193 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~-------~  258 (335)
T 2owb_A          193 YDG-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRIKKNE-------Y  258 (335)
T ss_dssp             STT-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTC-------C
T ss_pred             cCc-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHhcCC-------C
Confidence            332 22344679999999999999999999999999999999999999996432      222222222111       0


Q ss_pred             ccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          421 RLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       421 ~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .+.. ..+..   +.+++.+||+.||++||++.++++
T Consensus       259 ~~~~-~~~~~---~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          259 SIPK-HINPV---AASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             CCCT-TSCHH---HHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CCCc-cCCHH---HHHHHHHHccCChhHCcCHHHHhc
Confidence            1111 12333   445888999999999999999985


No 181
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=4.8e-42  Score=341.75  Aligned_cols=253  Identities=20%  Similarity=0.305  Sum_probs=199.2

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|.+........+.+..|+++++.++||||+++++++......++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4568999999999999999999986 488899999877666667889999999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++++|.+++...   ...+++..++.++.|++.||.|||+.   +++||||||+|||++.++.+||+|||++......
T Consensus        97 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT  170 (302)
T ss_dssp             CCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred             eCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence            99999999998764   35689999999999999999999998   9999999999999999999999999998643211


Q ss_pred             Ccceeecccccccccccccc-----cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          343 RSYVTTRVMGTFGYVAPEYA-----STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                       ........||+.|+|||++     .+..++.++||||||+++|||++|+.||....      ..+........... ..
T Consensus       171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~-~~  242 (302)
T 2j7t_A          171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKSDPP-TL  242 (302)
T ss_dssp             -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHSCCC-CC
T ss_pred             -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhccCCc-cc
Confidence             1112345789999999988     46778999999999999999999999996432      22222222221110 11


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                          ......+.   .+.+++.+||+.||++|||+.++++
T Consensus       243 ----~~~~~~~~---~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          243 ----LTPSKWSV---EFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             ----SSGGGSCH---HHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ----CCccccCH---HHHHHHHHHcccChhhCCCHHHHhc
Confidence                11111233   3455888999999999999999975


No 182
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=9.5e-42  Score=364.70  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=200.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh-------------hhHHHHHHHHHHHhcCCCCCeeeEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-------------QAEKEFKVEVEAIGRVRHKNLVRLLG  249 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~Ei~~l~~l~hpniv~l~~  249 (521)
                      ..++|.+.+.||+|+||+||+|... ++..||+|++.....             ...+.+.+|+.+|+.++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3568999999999999999999976 578899999865431             23467889999999999999999999


Q ss_pred             EEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC---
Q 009979          250 YCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW---  326 (521)
Q Consensus       250 ~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~---  326 (521)
                      ++.+....++|||||++|+|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++   
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~  186 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLL  186 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCc
Confidence            999999999999999999999998765    4689999999999999999999999   999999999999998775   


Q ss_pred             CceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHH
Q 009979          327 NPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLK  406 (521)
Q Consensus       327 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~  406 (521)
                      .+||+|||+++......  ......||+.|+|||++. +.++.++|||||||++|+|++|..||....      ..+.+.
T Consensus       187 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~  257 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN------DQDIIK  257 (504)
T ss_dssp             SEEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHH
T ss_pred             cEEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHH
Confidence            69999999999764432  234567999999999986 468999999999999999999999996432      222233


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .......   ..+.    .........+.+++.+||+.||.+|||+.|++++
T Consensus       258 ~i~~~~~---~~~~----~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          258 KVEKGKY---YFDF----NDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             HHHHCCC---CCCH----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHcCCC---CCCc----cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            3222110   0000    0001122345568889999999999999999853


No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=1.8e-42  Score=350.12  Aligned_cols=263  Identities=25%  Similarity=0.410  Sum_probs=199.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.....  ...+.+.+|+++++.++||||+++++++.+....++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            357999999999999999999976 488999999865433  33466788999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCC
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGA  341 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~  341 (521)
                      ||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       104 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          104 EFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             ECCSEEHHHHHHHST----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecCCcchHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            999999998887654    4689999999999999999999999   999999999999999999999999999987643


Q ss_pred             CCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH------------
Q 009979          342 ERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM------------  408 (521)
Q Consensus       342 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~------------  408 (521)
                      .. .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   .....+...            
T Consensus       177 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~  252 (331)
T 4aaa_A          177 PG-EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI---DQLYHIMMCLGNLIPRHQELF  252 (331)
T ss_dssp             --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCHHHHHHH
T ss_pred             Cc-cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHHHhCCCChhhhhHh
Confidence            32 223445799999999998775 7899999999999999999999999654321   111111100            


Q ss_pred             hhccccccCCCcccCCCc-----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          409 VTNRNAEGVLDPRLQEKP-----CSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       409 ~~~~~~~~~~d~~l~~~~-----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ...........+.+....     .+.....+.+++.+||+.||++|||+.|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  307 (331)
T 4aaa_A          253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH  307 (331)
T ss_dssp             HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            001111111111111111     11123456668889999999999999999853


No 184
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=2.1e-42  Score=340.89  Aligned_cols=247  Identities=23%  Similarity=0.441  Sum_probs=202.5

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee-----------
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE-----------  253 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~-----------  253 (521)
                      ++|++.+.||+|+||.||+|.+. +++.||+|.+....    +.+.+|+++++.++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            47899999999999999999986 68999999987543    346679999999999999999998854           


Q ss_pred             -----CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCc
Q 009979          254 -----GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNP  328 (521)
Q Consensus       254 -----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~v  328 (521)
                           ....++||||+++++|.+++....  ...+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence                 445799999999999999997642  35789999999999999999999998   99999999999999999999


Q ss_pred             eEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH
Q 009979          329 KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM  408 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~  408 (521)
                      ||+|||++.......  ......||+.|+|||.+.+..++.++||||||+++|||++|..||..        ........
T Consensus       162 kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--------~~~~~~~~  231 (284)
T 2a19_B          162 KIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE--------TSKFFTDL  231 (284)
T ss_dssp             EECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH--------HHHHHHHH
T ss_pred             EECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh--------HHHHHHHh
Confidence            999999998765432  23345799999999999999999999999999999999999988731        11111111


Q ss_pred             hhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCC
Q 009979          409 VTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEF  464 (521)
Q Consensus       409 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~  464 (521)
                       ...    .+.     ...+..   +.+++.+||+.||.+||++.++++.|+....
T Consensus       232 -~~~----~~~-----~~~~~~---~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          232 -RDG----IIS-----DIFDKK---EKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             -HTT----CCC-----TTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             -hcc----ccc-----ccCCHH---HHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence             111    111     112333   3458889999999999999999999986543


No 185
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.6e-42  Score=356.26  Aligned_cols=265  Identities=22%  Similarity=0.279  Sum_probs=195.5

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee------
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE------  253 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~------  253 (521)
                      ++...++|++.+.||+|+||+||+|.+. +++.||||++......    ..+|+++|+.++||||+++++++..      
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            3456779999999999999999999974 6899999998654332    2369999999999999999999844      


Q ss_pred             --------------------------------CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 009979          254 --------------------------------GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTY  301 (521)
Q Consensus       254 --------------------------------~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~  301 (521)
                                                      ....++||||++ |+|.+.+.........+++..+..++.|++.||+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            334789999997 58888776533335689999999999999999999


Q ss_pred             HHhcCCCCeeecCCCCCCeEeC-CCCCceEeecccceecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHH
Q 009979          302 LHEGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGIL  379 (521)
Q Consensus       302 LH~~~~~~iiHrDik~~NILl~-~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvv  379 (521)
                      ||+.   +|+||||||+|||++ .++.+||+|||+++.+.....  .....||+.|+|||++.+. .++.++|||||||+
T Consensus       157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (383)
T 3eb0_A          157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV  231 (383)
T ss_dssp             HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred             HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence            9998   999999999999997 688999999999997644332  3345789999999988765 49999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCCcccHHHHHHHHh---------hccccccCCCcccCCCc-----cHHHHHHHHHHHHhccCCC
Q 009979          380 IMEVISGRNPVDYSRPPGEVNLVEWLKTMV---------TNRNAEGVLDPRLQEKP-----CSRALKRALLVALRCVDPN  445 (521)
Q Consensus       380 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~d~~l~~~~-----~~~~~~~~~~li~~cl~~d  445 (521)
                      +|||++|+.||......  ..+...++..-         .........-+.+....     .......+.+++.+||+.|
T Consensus       232 l~ell~g~~pf~~~~~~--~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  309 (383)
T 3eb0_A          232 FGELILGKPLFSGETSI--DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE  309 (383)
T ss_dssp             HHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred             HHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence            99999999999744311  11111111100         00001111111111111     0112234556888999999


Q ss_pred             CCCCCCHHHHHH
Q 009979          446 AHKRPKMGHVIH  457 (521)
Q Consensus       446 P~~RPt~~evl~  457 (521)
                      |++|||+.|+++
T Consensus       310 P~~R~t~~e~l~  321 (383)
T 3eb0_A          310 PDLRINPYEAMA  321 (383)
T ss_dssp             GGGSCCHHHHHT
T ss_pred             hhhCCCHHHHhc
Confidence            999999999984


No 186
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=3.4e-42  Score=347.38  Aligned_cols=262  Identities=26%  Similarity=0.408  Sum_probs=204.5

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEE------cCCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVL------EDNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG  254 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~  254 (521)
                      ++..++|++.+.||+|+||.||+|.+      .++..||||.+... .......+..|+.+++.++||||+++++++.+.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            34567899999999999999999983      24678999998654 334456788999999999999999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNP  328 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~v  328 (521)
                      ...++||||+++++|.+++.....   ....+++..++.++.|++.||.|||+.   +|+||||||+|||++.   +..+
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~  182 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA  182 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred             CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence            999999999999999999987532   124589999999999999999999999   9999999999999984   4569


Q ss_pred             eEeecccceecCCCCc-ceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHH
Q 009979          329 KLSDFGLAKLLGAERS-YVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLK  406 (521)
Q Consensus       329 kL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~  406 (521)
                      ||+|||+++....... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||....      ..+...
T Consensus       183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~  256 (327)
T 2yfx_A          183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLE  256 (327)
T ss_dssp             EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHH
T ss_pred             EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------HHHHHH
Confidence            9999999986533222 22234568999999999988999999999999999999998 999996432      122222


Q ss_pred             HHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          407 TMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       407 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      .......      +.. ...++..   +.+++.+||+.||.+||++.++++.|+..
T Consensus       257 ~~~~~~~------~~~-~~~~~~~---l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          257 FVTSGGR------MDP-PKNCPGP---VYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHTTCC------CCC-CTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhcCCC------CCC-CCCCCHH---HHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            2222111      011 1123333   44588899999999999999999999854


No 187
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=5.7e-43  Score=351.16  Aligned_cols=265  Identities=25%  Similarity=0.366  Sum_probs=205.4

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG  254 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~  254 (521)
                      .+.++++..++|++.+.||+|+||.||+|.+.+  .+|+|++....  ....+.+.+|+.+++.++||||+++++++.+.
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            367778889999999999999999999999853  59999886532  22335677899999999999999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      ...++||||+++++|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++ ++.+||+|||
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             CceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecC
Confidence            9999999999999999999765   35688999999999999999999999   999999999999998 6799999999


Q ss_pred             cceecCCCC----cceeecccccccccccccccC---------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccH
Q 009979          335 LAKLLGAER----SYVTTRVMGTFGYVAPEYAST---------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNL  401 (521)
Q Consensus       335 la~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~  401 (521)
                      +++......    ........||+.|+|||++.+         ..++.++|||||||++|||++|+.||....      .
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~  248 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP------A  248 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC------H
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC------H
Confidence            987653211    112233568999999998864         457889999999999999999999996432      1


Q ss_pred             HHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccCCC
Q 009979          402 VEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEEFP  465 (521)
Q Consensus       402 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~~~  465 (521)
                      ..........      ..+.......+..   +.+++.+||+.||++|||+.+++++|+.....
T Consensus       249 ~~~~~~~~~~------~~~~~~~~~~~~~---l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          249 EAIIWQMGTG------MKPNLSQIGMGKE---ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             HHHHHHHHTT------CCCCCCCSSCCTT---HHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             HHHHHHhccC------CCCCCCcCCCCHH---HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence            1222222211      1111111122333   44488899999999999999999999876543


No 188
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=2e-41  Score=335.65  Aligned_cols=249  Identities=24%  Similarity=0.392  Sum_probs=198.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEee----CCee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE----GAHR  257 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~----~~~~  257 (521)
                      .+.|.+.+.||+|+||.||+|.+. ++..||+|.+....  ....+.+.+|+.+++.++||||+++++++..    ....
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence            345788899999999999999975 57789999986542  3445778899999999999999999999865    3567


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeEeC-CCCCceEeecc
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK--VVHRDIKSSNILLD-KQWNPKLSDFG  334 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~--iiHrDik~~NILl~-~~~~vkL~DFG  334 (521)
                      ++||||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +  |+||||||+|||++ .++.+||+|||
T Consensus       105 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             EEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence            9999999999999999764    4689999999999999999999998   7  99999999999997 78999999999


Q ss_pred             cceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ++......   ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....     +............  
T Consensus       178 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~--  246 (290)
T 1t4h_A          178 LATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTSGV--  246 (290)
T ss_dssp             GGGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTTTC--
T ss_pred             Cccccccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHHhccC--
Confidence            99754332   2334579999999998864 58999999999999999999999996432     2222222222111  


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                         ....+... .+   ..+.+++.+||+.||.+|||+.+++++
T Consensus       247 ---~~~~~~~~-~~---~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          247 ---KPASFDKV-AI---PEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             ---CCGGGGGC-CC---HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ---CccccCCC-CC---HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence               11111111 22   235558889999999999999999853


No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=1.5e-41  Score=338.73  Aligned_cols=248  Identities=25%  Similarity=0.413  Sum_probs=204.4

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEY  263 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~  263 (521)
                      +.|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            46899999999999999999965 58899999986543 34457889999999999999999999999999999999999


Q ss_pred             ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCC
Q 009979          264 IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAER  343 (521)
Q Consensus       264 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~  343 (521)
                      +++++|.+++..     ..+++..++.++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||++.......
T Consensus       102 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          102 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            999999999864     3689999999999999999999999   99999999999999999999999999998764432


Q ss_pred             cceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccC
Q 009979          344 SYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ  423 (521)
Q Consensus       344 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  423 (521)
                       .......||+.|+|||++.+..++.++||||||+++|||++|+.||....      ..+........ .     .+.+.
T Consensus       174 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~-----~~~~~  240 (303)
T 3a7i_A          174 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH------PMKVLFLIPKN-N-----PPTLE  240 (303)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS-C-----CCCCC
T ss_pred             -cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC------HHHHHHHhhcC-C-----CCCCc
Confidence             22344679999999999999999999999999999999999999996432      11222221111 1     11111


Q ss_pred             CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          424 EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       424 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      . ..+..   +.+++.+||+.||++|||+.+++++
T Consensus       241 ~-~~~~~---l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          241 G-NYSKP---LKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             S-SCCHH---HHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             c-ccCHH---HHHHHHHHcCCChhhCcCHHHHhhC
Confidence            1 12333   4458889999999999999999854


No 190
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=4.2e-42  Score=339.94  Aligned_cols=257  Identities=23%  Similarity=0.334  Sum_probs=190.4

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ++..++|++.+.||+|+||+||+|.+. +++.||+|++.....  ...+.+..+...++.++||||+++++++.++...+
T Consensus         3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            456678999999999999999999974 688899999865422  22244555666688899999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||++ |+|.+++.........+++..++.++.|++.||+|||++.  +|+||||||+|||++.++.+||+|||+++.
T Consensus        83 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           83 ICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGY  159 (290)
T ss_dssp             EEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred             EEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence            9999997 5988887653333568999999999999999999999843  899999999999999999999999999987


Q ss_pred             cCCCCcceeecccccccccccccc----cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYA----STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      .....  ......||+.|+|||++    .+..++.++|||||||++|||++|+.||....     .....+........ 
T Consensus       160 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~-  231 (290)
T 3fme_A          160 LVDDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPS-  231 (290)
T ss_dssp             ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHSCC-
T ss_pred             ccccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----chHHHHHHHhccCC-
Confidence            64332  22334799999999996    56678999999999999999999999996432     12222233322211 


Q ss_pred             ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          415 EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       415 ~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                           +.......+.   .+.+++.+||+.||++|||+.++++
T Consensus       232 -----~~~~~~~~~~---~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          232 -----PQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             -----CCCCTTTSCH---HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -----CCcccccCCH---HHHHHHHHHhhcChhhCcCHHHHHh
Confidence                 1111112333   3455888999999999999999975


No 191
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=2.4e-42  Score=367.47  Aligned_cols=251  Identities=23%  Similarity=0.356  Sum_probs=204.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++|++.+.||+|+||.||+|... +++.||||++....   ....+.+.+|++++++++||||+++++++.+....++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            457999999999999999999976 68899999986542   33457789999999999999999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccce
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAK  337 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~  337 (521)
                      |||+.+|+|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||+   +.++.+||+|||+++
T Consensus       105 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          105 GEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             ECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            9999999999999765    5689999999999999999999999   99999999999999   567899999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccC
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGV  417 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (521)
                      .+....  ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....      ..+.+........    
T Consensus       178 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~----  244 (484)
T 3nyv_A          178 HFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN------EYDILKKVEKGKY----  244 (484)
T ss_dssp             HBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC----
T ss_pred             Eccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCC----
Confidence            764432  2344679999999999866 68999999999999999999999996432      2222333222111    


Q ss_pred             CCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          418 LDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       418 ~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .  +...........+.+++.+||+.||.+|||+.+++++
T Consensus       245 -~--~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          245 -T--FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             -C--CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -C--CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence             0  0111111222345558889999999999999999853


No 192
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2e-43  Score=363.71  Aligned_cols=244  Identities=16%  Similarity=0.212  Sum_probs=189.8

Q ss_pred             cCCCccccceEccCCcEEEEEEEE-cCCcEEEEEEeccC---ChhhHHHHHHHH---HHHhcCCCCCeeeEE-------E
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL-EDNTNVAVKNLLNN---RGQAEKEFKVEV---EAIGRVRHKNLVRLL-------G  249 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei---~~l~~l~hpniv~l~-------~  249 (521)
                      ..++|.+.+.||+|+||+||+|.+ .+++.||||++...   .....+.+.+|+   ++++.++||||++++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            456899999999999999999995 46899999998743   334557888999   555566899999998       6


Q ss_pred             EEeeCC-----------------eeeEEEEeccCCchHHhhhcCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 009979          250 YCAEGA-----------------HRMLVYEYIDNGNLEQWLHGDVG---PHSPLTWEIRMNIILGTAKGLTYLHEGLEPK  309 (521)
Q Consensus       250 ~~~~~~-----------------~~~lV~e~~~~g~L~~~l~~~~~---~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~  309 (521)
                      ++.+.+                 ..||||||+ +|+|.+++.....   ....+++..++.|+.|++.||+|||++   +
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~  226 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G  226 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence            666553                 278999999 6799999976411   112344588889999999999999999   9


Q ss_pred             eeecCCCCCCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccCC-----------CCCCcccchhHHH
Q 009979          310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG-----------MLNERSDVYSFGI  378 (521)
Q Consensus       310 iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwS~Gv  378 (521)
                      |+||||||+|||++.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            99999999999999999999999999986432    3345678 999999999877           8999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          379 LIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       379 vl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ++|||++|+.||..........               .+.. .  ....+..   +.+++.+||+.||++||++.++++
T Consensus       302 il~elltg~~Pf~~~~~~~~~~---------------~~~~-~--~~~~~~~---~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          302 VIYWIWCADLPITKDAALGGSE---------------WIFR-S--CKNIPQP---VRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHSSCCC------CCSG---------------GGGS-S--CCCCCHH---HHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHCCCCCcccccccchh---------------hhhh-h--ccCCCHH---HHHHHHHHcCCCchhCCCHHHHhh
Confidence            9999999999996543221110               0000 0  0123333   445888999999999999999985


No 193
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1e-41  Score=352.14  Aligned_cols=272  Identities=19%  Similarity=0.229  Sum_probs=207.5

Q ss_pred             cchhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC--------CCCeee
Q 009979          176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR--------HKNLVR  246 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--------hpniv~  246 (521)
                      +.+.-.++..++|++.+.||+|+||+||+|.+. +++.||||++... ....+.+.+|+++++.++        |+||++
T Consensus        27 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           27 HLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             CSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             eEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            334444555679999999999999999999965 5788999998643 344567888999999885        788999


Q ss_pred             EEEEEe----eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe
Q 009979          247 LLGYCA----EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL  322 (521)
Q Consensus       247 l~~~~~----~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl  322 (521)
                      +++++.    +....++||||+ +++|.+++...  ....+++..++.++.|++.||+|||+++  +|+||||||+|||+
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll  180 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILL  180 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEE
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeE
Confidence            999987    556789999999 55776666544  2357999999999999999999999853  79999999999999


Q ss_pred             CCCC-------------------------------------------------CceEeecccceecCCCCcceeeccccc
Q 009979          323 DKQW-------------------------------------------------NPKLSDFGLAKLLGAERSYVTTRVMGT  353 (521)
Q Consensus       323 ~~~~-------------------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt  353 (521)
                      +.++                                                 .+||+|||+++.....    .....||
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt  256 (397)
T 1wak_A          181 SVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQT  256 (397)
T ss_dssp             CCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSC
T ss_pred             eccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCC
Confidence            8775                                                 7999999999876432    2345799


Q ss_pred             ccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhh---c---------cccccCCCc-
Q 009979          354 FGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT---N---------RNAEGVLDP-  420 (521)
Q Consensus       354 ~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~d~-  420 (521)
                      +.|+|||++.+..++.++|||||||++|||+||+.||..............+..+..   .         ......... 
T Consensus       257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  336 (397)
T 1wak_A          257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK  336 (397)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred             CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence            999999999999999999999999999999999999986654433222222222111   0         000000000 


Q ss_pred             -------ccC-----------CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          421 -------RLQ-----------EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       421 -------~l~-----------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                             ...           ..........+.+|+.+||+.||++|||+.|+++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                   000           0113445567778999999999999999999985


No 194
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=3.7e-42  Score=338.07  Aligned_cols=251  Identities=22%  Similarity=0.376  Sum_probs=196.7

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      .+..++|.+.+.||+|+||.||+|.+. +++.||+|.+....   ....+.+.+|+.+++.++||||+++++++.+....
T Consensus         7 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (276)
T 2h6d_A            7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDF   86 (276)
T ss_dssp             CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             cceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeE
Confidence            345568999999999999999999976 68899999986532   22346788999999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++++|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++.
T Consensus        87 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~  159 (276)
T 2h6d_A           87 FMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSN  159 (276)
T ss_dssp             EEEEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred             EEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccc
Confidence            9999999999999999765    4689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      ......  ......||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||....      ..+........ ..  
T Consensus       160 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~-~~--  228 (276)
T 2h6d_A          160 MMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIRGG-VF--  228 (276)
T ss_dssp             CCCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC-CC--
T ss_pred             ccCCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhcC-cc--
Confidence            764322  2234578999999999987765 689999999999999999999996432      12222222211 10  


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                          .+. ...+..   +.+++.+||+.||++|||+.+++++
T Consensus       229 ----~~~-~~~~~~---l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          229 ----YIP-EYLNRS---VATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             ----CCC-TTSCHH---HHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ----cCc-hhcCHH---HHHHHHHHccCChhhCCCHHHHHhC
Confidence                011 112333   4458889999999999999999864


No 195
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=3.3e-42  Score=377.19  Aligned_cols=246  Identities=28%  Similarity=0.449  Sum_probs=195.5

Q ss_pred             ceEccCCcEEEEEEEEc---CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEEeccC
Q 009979          192 NVIGEGGYGIVYHGVLE---DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDN  266 (521)
Q Consensus       192 ~~LG~G~fG~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e~~~~  266 (521)
                      +.||+|+||.||+|.+.   .++.||||++.....  ...+++.+|+++|++++|||||++++++.. ...+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            47999999999999753   457899999875432  335789999999999999999999999965 557899999999


Q ss_pred             CchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCcc-
Q 009979          267 GNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSY-  345 (521)
Q Consensus       267 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~-  345 (521)
                      |+|.++++..    ..+++..++.++.|++.||+|||++   +|+||||||+||||+.++.+||+|||+++.+...... 
T Consensus       454 g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~  526 (635)
T 4fl3_A          454 GPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  526 (635)
T ss_dssp             EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred             CCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence            9999999765    5789999999999999999999999   9999999999999999999999999999876543322 


Q ss_pred             -eeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccC
Q 009979          346 -VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQ  423 (521)
Q Consensus       346 -~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~  423 (521)
                       ......||+.|+|||++.+..++.++|||||||+||||++ |+.||.....      .+... .+.....     ... 
T Consensus       527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~------~~~~~-~i~~~~~-----~~~-  593 (635)
T 4fl3_A          527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG------SEVTA-MLEKGER-----MGC-  593 (635)
T ss_dssp             --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH------HHHHH-HHHTTCC-----CCC-
T ss_pred             ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHHH-HHHcCCC-----CCC-
Confidence             2233457889999999999999999999999999999998 9999964432      12222 2222111     111 


Q ss_pred             CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhc
Q 009979          424 EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEA  461 (521)
Q Consensus       424 ~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~  461 (521)
                      ...++..   +.+++.+||+.||++||++.+|++.|+.
T Consensus       594 p~~~~~~---l~~li~~cl~~dP~~RPs~~~l~~~L~~  628 (635)
T 4fl3_A          594 PAGCPRE---MYDLMNLCWTYDVENRPGFAAVELRLRN  628 (635)
T ss_dssp             CTTCCHH---HHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CCCCCHH---HHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            1123444   4458889999999999999999999975


No 196
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=4.7e-42  Score=349.75  Aligned_cols=262  Identities=19%  Similarity=0.293  Sum_probs=200.0

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEee--------C
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAE--------G  254 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~--------~  254 (521)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.....  .....+.+|+++++.++||||+++++++..        .
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            47999999999999999999974 688999999865432  234677889999999999999999999987        3


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      ...++||||+++ +|.+.+...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        97 ~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           97 GSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence            468999999975 888887665   35699999999999999999999999   99999999999999999999999999


Q ss_pred             cceecCCCC---cceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhh
Q 009979          335 LAKLLGAER---SYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT  410 (521)
Q Consensus       335 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  410 (521)
                      +++.+....   ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.....   ......+.....
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~  246 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE---QHQLALISQLCG  246 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhC
Confidence            998764322   222344678999999998876 5689999999999999999999999975432   112222222111


Q ss_pred             ccccccCCCc-------------ccCCCccHHH------HHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          411 NRNAEGVLDP-------------RLQEKPCSRA------LKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       411 ~~~~~~~~d~-------------~l~~~~~~~~------~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .... .....             ..........      ...+.+++.+||+.||++|||+.|++++
T Consensus       247 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          247 SITP-EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             CCCT-TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCh-hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            1000 00000             0000001111      1235678999999999999999999854


No 197
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=1.6e-41  Score=359.61  Aligned_cols=260  Identities=19%  Similarity=0.233  Sum_probs=206.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCeeeEEEEEeeCCeeeEEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH-KNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h-pniv~l~~~~~~~~~~~lV~e  262 (521)
                      .++|++.++||+|+||.||+|.+. +++.||||++.....  ...+..|+++++.++| +++..+..++.+....+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            468999999999999999999974 688999998764432  2357789999999986 566667777788888999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe---CCCCCceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL---DKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl---~~~~~vkL~DFGla~~~  339 (521)
                      |+ +++|.+++...   ...+++..++.|+.||+.||+|||++   +|+||||||+||||   +.++.+||+|||+++.+
T Consensus        84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99 88999999864   35799999999999999999999999   99999999999999   68899999999999987


Q ss_pred             CCCCcc------eeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          340 GAERSY------VTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       340 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      ......      ......||+.|+|||++.+..++.++|||||||+||||++|+.||............+.+........
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS  236 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred             cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence            543321      12356799999999999999999999999999999999999999987655443333332222211111


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...     +. ..++   .++.+++.+||+.||++||++.+|+++|+..
T Consensus       237 ~~~-----l~-~~~p---~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          237 IEA-----LC-RGYP---TEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHH-----HH-TTSC---HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHH-----Hh-cCCc---HHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            000     00 0122   3455688899999999999999999988753


No 198
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=9.6e-42  Score=363.02  Aligned_cols=250  Identities=23%  Similarity=0.326  Sum_probs=201.0

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ++|.+.+.||+|+||+||+|... +++.||||++....  ......+.+|++++++++||||+++++++.+....++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            47999999999999999999976 68899999985432  2345678899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC---CCCCceEeecccceec
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD---KQWNPKLSDFGLAKLL  339 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~---~~~~vkL~DFGla~~~  339 (521)
                      ||.+|+|.+++...    ..+++..+..++.|++.||.|||++   +|+||||||+|||++   .++.+||+|||+++..
T Consensus       102 ~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A          102 LYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred             cCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence            99999999998765    4689999999999999999999999   999999999999995   5567999999999866


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                      ....  ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||....      ..+.+........     .
T Consensus       175 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~-----~  240 (486)
T 3mwu_A          175 QQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKY-----A  240 (486)
T ss_dssp             CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCC-----C
T ss_pred             CCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCC-----C
Confidence            4332  2345679999999999875 58999999999999999999999996432      2233333322111     0


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                        +...........+.+++.+||+.||.+|||+.+++++
T Consensus       241 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          241 --FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             --SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             --CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              0001111222345558889999999999999999864


No 199
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=8.1e-42  Score=344.03  Aligned_cols=259  Identities=27%  Similarity=0.409  Sum_probs=199.8

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEee--
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAE--  253 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~--  253 (521)
                      +.++....++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+..|+.+++++ +||||+++++++..  
T Consensus        16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   94 (326)
T 2x7f_A           16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN   94 (326)
T ss_dssp             CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred             chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence            4445556789999999999999999999974 68899999986543 3456788999999999 79999999999976  


Q ss_pred             ----CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCce
Q 009979          254 ----GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPK  329 (521)
Q Consensus       254 ----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vk  329 (521)
                          ....++||||+++|+|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+|
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~k  169 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK  169 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEE
Confidence                467899999999999999998652  35789999999999999999999999   999999999999999999999


Q ss_pred             EeecccceecCCCCcceeeccccccccccccccc-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHH
Q 009979          330 LSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAS-----TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEW  404 (521)
Q Consensus       330 L~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~  404 (521)
                      |+|||++....... .......||+.|+|||++.     +..++.++|||||||++|+|++|+.||.....      ...
T Consensus       170 l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~  242 (326)
T 2x7f_A          170 LVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRA  242 (326)
T ss_dssp             ECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHH
T ss_pred             EeeCcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHH
Confidence            99999998764322 1223457999999999986     56789999999999999999999999964321      111


Q ss_pred             HHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          405 LKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       405 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ........      .+.+.....+..+   .+++.+||+.||.+||++.+++++
T Consensus       243 ~~~~~~~~------~~~~~~~~~~~~l---~~li~~~l~~dp~~Rps~~~ll~h  287 (326)
T 2x7f_A          243 LFLIPRNP------APRLKSKKWSKKF---QSFIESCLVKNHSQRPATEQLMKH  287 (326)
T ss_dssp             HHHHHHSC------CCCCSCSCSCHHH---HHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHHhhcCc------cccCCccccCHHH---HHHHHHHhccChhhCCCHHHHhhC
Confidence            12211111      1112222234444   447889999999999999999863


No 200
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=6.5e-42  Score=347.04  Aligned_cols=258  Identities=24%  Similarity=0.368  Sum_probs=201.6

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHH-HhcCCCCCeeeEEEEEeeCCee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEA-IGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~-l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      +++..++|++.+.||+|+||.||+|.+. +++.||||++.... ......+..|+.+ ++.++||||+++++++.+....
T Consensus        46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~  125 (340)
T 3an0_A           46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV  125 (340)
T ss_dssp             CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred             eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence            3566789999999999999999999974 68899999986543 2333455555555 7888999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++ +|.+++.........+++..++.++.|++.||+|||+..  +|+||||||+|||++.++.+||+|||+++
T Consensus       126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  202 (340)
T 3an0_A          126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG  202 (340)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred             EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence            999999975 999988753223468999999999999999999999742  89999999999999999999999999998


Q ss_pred             ecCCCCcceeeccccccccccccccc----CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYAS----TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      .....  .......||+.|+|||++.    ...++.++|||||||++|||+||+.||....     ...+.+........
T Consensus       203 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-----~~~~~~~~~~~~~~  275 (340)
T 3an0_A          203 YLVDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEEPS  275 (340)
T ss_dssp             HHSCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHSCC
T ss_pred             ecccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-----chHHHHHHHhcCCC
Confidence            76432  2223357999999999964    4478999999999999999999999996432     12222333332211


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                            +.+....++   ..+.+++.+||+.||++||++.++++
T Consensus       276 ------~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          276 ------PQLPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             ------CCCCGGGSC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ------CCCCcccCC---HHHHHHHHHHccCCcccCcCHHHHhc
Confidence                  111111123   34555888999999999999999974


No 201
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=5.6e-42  Score=350.59  Aligned_cols=269  Identities=23%  Similarity=0.284  Sum_probs=198.2

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCCh-----------hhHHHHHHHHHHHhcCCCCCeee
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG-----------QAEKEFKVEVEAIGRVRHKNLVR  246 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~Ei~~l~~l~hpniv~  246 (521)
                      +.++....++|.+.+.||+|+||.||+|...++..||||++.....           ...+.+.+|+++++.++||||++
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            5667778899999999999999999999988899999999854322           12377899999999999999999


Q ss_pred             EEEEEee-----CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 009979          247 LLGYCAE-----GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNIL  321 (521)
Q Consensus       247 l~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NIL  321 (521)
                      +++++..     ....++||||++ |+|.+++...   ...+++..++.++.|++.||+|||+.   +|+||||||+|||
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  166 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL  166 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence            9999854     336799999997 5999988754   35799999999999999999999999   9999999999999


Q ss_pred             eCCCCCceEeecccceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCccc
Q 009979          322 LDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVN  400 (521)
Q Consensus       322 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~  400 (521)
                      ++.++.+||+|||+++.....  .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....   ..
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~  241 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF---YN  241 (362)
T ss_dssp             ECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HH
T ss_pred             EcCCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH---HH
Confidence            999999999999999864332  22344678999999998876 7799999999999999999999999975431   11


Q ss_pred             HHHHHHHHhhccc-----------cccCCCccc---CCC----ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          401 LVEWLKTMVTNRN-----------AEGVLDPRL---QEK----PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       401 ~~~~~~~~~~~~~-----------~~~~~d~~l---~~~----~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....+........           ....+...+   ...    ..+.....+.+++.+||+.||++|||+.|++++
T Consensus       242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            1111111110000           000000000   000    011112345568889999999999999999854


No 202
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.3e-41  Score=336.22  Aligned_cols=250  Identities=26%  Similarity=0.389  Sum_probs=199.3

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|.+....  ..+.+..|+.+++.++||||+++++++......++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            4568999999999999999999976 48899999986543  34678899999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+++++|.+++...   ...+++..++.++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++......
T Consensus       105 ~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          105 YCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             CCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             cCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            99999999999743   35789999999999999999999998   9999999999999999999999999999876433


Q ss_pred             CcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCccc
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRL  422 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l  422 (521)
                      . .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....      ...........      .+.+
T Consensus       179 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~------~~~~  245 (314)
T 3com_A          179 M-AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP------MRAIFMIPTNP------PPTF  245 (314)
T ss_dssp             B-SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC------CCCC
T ss_pred             c-cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCC------Cccc
Confidence            2 223345789999999999999999999999999999999999999964321      11111111111      1111


Q ss_pred             C-CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          423 Q-EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       423 ~-~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      . ....+.   .+.+++.+||+.||.+|||+.++++
T Consensus       246 ~~~~~~~~---~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          246 RKPELWSD---NFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             SSGGGSCH---HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCcccCCH---HHHHHHHHHccCChhhCcCHHHHHh
Confidence            1 111233   3455888999999999999999975


No 203
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=3e-42  Score=354.19  Aligned_cols=252  Identities=11%  Similarity=0.035  Sum_probs=179.9

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHH---HHHhcCCCCCeeeEE-------EEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEV---EAIGRVRHKNLVRLL-------GYC  251 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei---~~l~~l~hpniv~l~-------~~~  251 (521)
                      ..|.+.+.||+|+||+||+|.+. +++.||||++.....   ...+.+..|+   ++|+. +||||++++       +++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            35889999999999999999975 688999999977543   3345677785   45555 799988755       444


Q ss_pred             eeC-----------------CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 009979          252 AEG-----------------AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIR------MNIILGTAKGLTYLHEGLEP  308 (521)
Q Consensus       252 ~~~-----------------~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~~ia~al~~LH~~~~~  308 (521)
                      ...                 ...||||||++ |+|.+++....   ..+.+..+      +.++.|++.||+|||++   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---  213 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSK---  213 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence            433                 33799999998 89999998641   23344455      67789999999999999   


Q ss_pred             CeeecCCCCCCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccC--CCCCCcccchhHHHHHHHHHhC
Q 009979          309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST--GMLNERSDVYSFGILIMEVISG  386 (521)
Q Consensus       309 ~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG  386 (521)
                      +|+||||||+|||++.++.+||+|||+++.....    .....||+.|+|||++.+  ..++.++|||||||++|||+||
T Consensus       214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg  289 (371)
T 3q60_A          214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL  289 (371)
T ss_dssp             TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999976422    224567899999999987  7799999999999999999999


Q ss_pred             CCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          387 RNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       387 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      +.||....+.....        .............+....+......+.+++.+||+.||++|||+.++++
T Consensus       290 ~~Pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          290 FLPFGLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             SCSTTBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCCCCCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99998664321110        0000000011111111111122334555888999999999999999974


No 204
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.8e-41  Score=347.77  Aligned_cols=252  Identities=22%  Similarity=0.370  Sum_probs=202.2

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeC
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--------QAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEG  254 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~  254 (521)
                      .++|.+.+.||+|+||.||+|.+. +|+.||||++.....        ...+.+..|+.+++.+ +||||+++++++...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            457999999999999999999986 689999999865431        1235678899999999 799999999999999


Q ss_pred             CeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          255 AHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       255 ~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      ...++||||+++++|.+++...    ..+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG  245 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG  245 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence            9999999999999999999764    4689999999999999999999998   99999999999999999999999999


Q ss_pred             cceecCCCCcceeecccccccccccccccC------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYAST------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM  408 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~  408 (521)
                      ++..+....  ......||+.|+|||++.+      ..++.++|||||||++|||++|+.||....      ....+...
T Consensus       246 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i  317 (365)
T 2y7j_A          246 FSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMI  317 (365)
T ss_dssp             TCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH
T ss_pred             cccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHH
Confidence            998765432  2345679999999998853      368899999999999999999999996432      12222222


Q ss_pred             hhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          409 VTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       409 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .... . ....+..  ...+   ..+.+++.+||+.||++|||+.+++++
T Consensus       318 ~~~~-~-~~~~~~~--~~~~---~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          318 MEGQ-Y-QFSSPEW--DDRS---STVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHTC-C-CCCHHHH--SSSC---HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HhCC-C-CCCCccc--ccCC---HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            2111 0 0000000  0112   335558889999999999999999863


No 205
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=8.2e-42  Score=347.57  Aligned_cols=262  Identities=24%  Similarity=0.324  Sum_probs=197.0

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh-----hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ-----AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      ..++|++.+.||+|+||.||+|.+. +++.||||++......     ....+.+|+++++.++||||+++++++.+....
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            3468999999999999999999975 5889999998653221     124678899999999999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+++ +|.+++...   ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence            999999976 899988765   35688889999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc---cc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN---RN  413 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~---~~  413 (521)
                      ...... .......||+.|+|||++.+. .++.++|||||||++|||++|..||.....      .+.+......   ..
T Consensus       161 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~------~~~~~~i~~~~~~~~  233 (346)
T 1ua2_A          161 SFGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD------LDQLTRIFETLGTPT  233 (346)
T ss_dssp             TTTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHHHCCCC
T ss_pred             eccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHHHcCCCC
Confidence            764332 223456799999999998654 589999999999999999999999864321      1222222111   00


Q ss_pred             cccCC------C----cccCCCc----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          414 AEGVL------D----PRLQEKP----CSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       414 ~~~~~------d----~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                      .....      +    ......+    .......+.+++.+||+.||++|||+.|++++-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          234 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             TTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             hhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            00000      0    0000000    011224556688899999999999999998654


No 206
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=1.2e-41  Score=335.66  Aligned_cols=246  Identities=21%  Similarity=0.314  Sum_probs=197.6

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      ++|++.+.||+|+||.||+|.+. +++.||+|.+....  ......+.+|+..+..+ +||||+++++++.+....++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            47899999999999999999976 68999999987542  33456788899999999 8999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC-----------------
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK-----------------  324 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~-----------------  324 (521)
                      ||+++++|.+++.........+++..++.++.|++.||+|||++   +|+||||||+|||++.                 
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            99999999999976432235789999999999999999999999   9999999999999984                 


Q ss_pred             --CCCceEeecccceecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccH
Q 009979          325 --QWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNL  401 (521)
Q Consensus       325 --~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~  401 (521)
                        ...+||+|||++.......     ...||+.|+|||.+.+. .++.++|||||||++|||++|..|+...      ..
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~  236 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------DQ  236 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS------HH
T ss_pred             CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch------hH
Confidence              4479999999998764432     23589999999998765 5678999999999999999998876422      11


Q ss_pred             HHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          402 VEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       402 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .   .... ....     +.+.. ..+..   +.+++.+||+.||++|||+.+++++
T Consensus       237 ~---~~~~-~~~~-----~~~~~-~~~~~---~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          237 W---HEIR-QGRL-----PRIPQ-VLSQE---FTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             H---HHHH-TTCC-----CCCSS-CCCHH---HHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             H---HHHH-cCCC-----CCCCc-ccCHH---HHHHHHHHhCCCcccCCCHHHHhhC
Confidence            1   1111 1111     11111 13333   4458889999999999999999743


No 207
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=1.8e-41  Score=348.53  Aligned_cols=257  Identities=25%  Similarity=0.307  Sum_probs=192.0

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC------
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA------  255 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~------  255 (521)
                      .++|.+.+.||+|+||.||+|... +++.||||++...  .....+.+.+|+.+++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            468999999999999999999975 5888999998653  2334567889999999999999999999997654      


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..++||||+++ +|.+++..      .+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL  173 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence            67999999975 88888853      478999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc----
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN----  411 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~----  411 (521)
                      ++.....  .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....      .+.+......    
T Consensus       174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~~  245 (371)
T 2xrw_A          174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH------IDQWNKVIEQLGTP  245 (371)
T ss_dssp             ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHC-CCCC
T ss_pred             ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHHHhCCC
Confidence            9875432  223456799999999999999999999999999999999999999975431      1111111110    


Q ss_pred             ------------------ccc------ccCCCccc-CCC--ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          412 ------------------RNA------EGVLDPRL-QEK--PCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       412 ------------------~~~------~~~~d~~l-~~~--~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                                        ...      ........ ...  ........+.+|+.+||+.||++|||+.|++++-
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             CHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             CHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence                              000      00000000 000  0112245567799999999999999999998643


No 208
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-41  Score=348.33  Aligned_cols=257  Identities=22%  Similarity=0.322  Sum_probs=193.8

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC------
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA------  255 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~------  255 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||||++...  .....+.+.+|+++++.++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            458999999999999999999975 6889999998543  2334467889999999999999999999997653      


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..|+||||+ +++|.+++...     .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~  174 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL  174 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence            459999999 78999999753     689999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc--
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR--  412 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--  412 (521)
                      ++.....    .+...||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+.......  
T Consensus       175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~~~~  247 (367)
T 1cm8_A          175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL---DQLKEIMKVTGTPPA  247 (367)
T ss_dssp             CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCH
T ss_pred             ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCH
Confidence            9975432    345678999999998876 78999999999999999999999999744311   1111111100000  


Q ss_pred             ----------------ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          413 ----------------NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       413 ----------------~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                                      .........+.. ........+.+++.+||+.||++|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          248 EFVQRLQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             HHHHTCSCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHhhhHHHHHHHHhCCCCCCCCHHH-HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence                            000000001100 011122345568889999999999999999874


No 209
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=1.9e-41  Score=373.57  Aligned_cols=252  Identities=21%  Similarity=0.291  Sum_probs=205.5

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCe
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~  256 (521)
                      .+..++|++.++||+|+||.||+|.+. +++.||||++.+..   ....+.+..|..++..+ +||||+++++++.+...
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            345678999999999999999999976 57789999987532   23346678899999988 79999999999999999


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      +||||||+++|+|.++++..    ..+++..++.++.||+.||+|||+.   +|+||||||+||||+.++++||+|||++
T Consensus       417 ~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla  489 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC  489 (674)
T ss_dssp             EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred             EEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeeccee
Confidence            99999999999999999865    4689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      +..... .......+||+.|+|||++.+..|+.++|||||||+||||++|+.||...+      ..+.+.......    
T Consensus       490 ~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~----  558 (674)
T 3pfq_A          490 KENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIMEHN----  558 (674)
T ss_dssp             EECCCT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHSSC----
T ss_pred             eccccC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC------HHHHHHHHHhCC----
Confidence            864332 223456789999999999999999999999999999999999999996432      223333333211    


Q ss_pred             CCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 009979          417 VLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKM-----GHVIHM  458 (521)
Q Consensus       417 ~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~-----~evl~~  458 (521)
                         ..+... .+   .++.+|+.+||+.||++||++     .+|+++
T Consensus       559 ---~~~p~~-~s---~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          559 ---VAYPKS-MS---KEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             ---CCCCTT-SC---HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             ---CCCCcc-CC---HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence               111111 22   345558889999999999997     777643


No 210
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.6e-41  Score=354.57  Aligned_cols=261  Identities=25%  Similarity=0.323  Sum_probs=195.2

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC------Ceee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG------AHRM  258 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~------~~~~  258 (521)
                      .+|++.+.||+|+||.||+|.+. +++.||||++.....    .+.+|+++|+.++||||++++++|...      ...+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            36899999999999999999985 588999999865432    234699999999999999999998542      2367


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC-CCceEeecccce
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ-WNPKLSDFGLAK  337 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~-~~vkL~DFGla~  337 (521)
                      +||||+++ +|.+++.........+++..++.++.|++.||+|||++   +|+||||||+||||+.+ +.+||+|||+++
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999976 77776654222346799999999999999999999998   99999999999999955 568999999999


Q ss_pred             ecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH-------h
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM-------V  409 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~-------~  409 (521)
                      .+.....  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.....  ...+.++++..       +
T Consensus       206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~--~~~l~~i~~~lg~p~~~~~  281 (420)
T 1j1b_A          206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG--VDQLVEIIKVLGTPTREQI  281 (420)
T ss_dssp             ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred             hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHH
Confidence            7643322  2345789999999998764 799999999999999999999999975421  11222222210       0


Q ss_pred             h--ccccccCCCcccCCCcc-----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          410 T--NRNAEGVLDPRLQEKPC-----SRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       410 ~--~~~~~~~~d~~l~~~~~-----~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .  .........+.+...+.     .....++.+|+.+||+.||.+||++.|++++
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            0  11111111222221111     1122456668899999999999999999854


No 211
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=4.1e-41  Score=334.31  Aligned_cols=251  Identities=22%  Similarity=0.321  Sum_probs=202.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC---------hhhHHHHHHHHHHHhcCC-CCCeeeEEEEEee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR---------GQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAE  253 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~  253 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||||.+....         ....+.+..|+++++++. ||||+++++++..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            468999999999999999999976 57889999986543         122356788999999996 9999999999999


Q ss_pred             CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeec
Q 009979          254 GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDF  333 (521)
Q Consensus       254 ~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DF  333 (521)
                      ....++||||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +++||||||+|||++.++.+||+||
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence            99999999999999999999764    4689999999999999999999999   9999999999999999999999999


Q ss_pred             ccceecCCCCcceeeccccccccccccccc------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYAS------TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      |++.......  ......||+.|+|||++.      ...++.++||||||+++|||++|+.||....      .......
T Consensus       169 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~  240 (298)
T 1phk_A          169 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRM  240 (298)
T ss_dssp             TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH
T ss_pred             cchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc------HHHHHHH
Confidence            9998764432  234457899999999884      5568899999999999999999999996432      1222222


Q ss_pred             HhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          408 MVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       408 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ..... . .     ............+.+++.+||+.||++|||+.++++
T Consensus       241 ~~~~~-~-~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          241 IMSGN-Y-Q-----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHTC-C-C-----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhcCC-c-c-----cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            22211 1 0     011111122234555888999999999999999975


No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=3.6e-41  Score=334.88  Aligned_cols=259  Identities=21%  Similarity=0.358  Sum_probs=199.5

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEEE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      ++|++.+.||+|+||.||+|... +++.||+|++.....  ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            57999999999999999999976 688999999865432  234678889999999999999999999999999999999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCC
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAE  342 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~  342 (521)
                      |+. ++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+||+++.++.+||+|||++......
T Consensus        83 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  156 (299)
T 2r3i_A           83 FLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP  156 (299)
T ss_dssp             CCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred             ccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence            997 59999997652  35688999999999999999999999   9999999999999999999999999999876432


Q ss_pred             CcceeecccccccccccccccCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc-ccccc----
Q 009979          343 RSYVTTRVMGTFGYVAPEYASTGM-LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN-RNAEG----  416 (521)
Q Consensus       343 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~----  416 (521)
                      .. ......||+.|+|||.+.+.. ++.++|||||||++|||+||+.||.....      .+.+...... +....    
T Consensus       157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~~~~~  229 (299)
T 2r3i_A          157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE------IDQLFRIFRTLGTPDEVVWP  229 (299)
T ss_dssp             SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCCCCTTTST
T ss_pred             cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHHHHhCCCchhhhh
Confidence            21 223456899999999987765 89999999999999999999999964431      1112211110 00000    


Q ss_pred             ------CCCcccCC----Cc---cHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          417 ------VLDPRLQE----KP---CSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       417 ------~~d~~l~~----~~---~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                            ...+.+..    ..   .+.....+.+++.+||+.||++|||+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                  00111110    00   0112234556888999999999999999985


No 213
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=4.1e-41  Score=339.46  Aligned_cols=258  Identities=20%  Similarity=0.282  Sum_probs=198.0

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEee--CCeeeEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAE--GAHRMLV  260 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~--~~~~~lV  260 (521)
                      .++|++.+.||+|+||+||+|.+. +++.||+|++...   ..+.+.+|+++++.++ ||||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            467999999999999999999964 6889999998643   3467889999999997 9999999999987  5678999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCC-CceEeecccceec
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQW-NPKLSDFGLAKLL  339 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~-~vkL~DFGla~~~  339 (521)
                      |||+++++|.+++.       .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++ .+||+|||+++..
T Consensus       112 ~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             EECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            99999999999885       378899999999999999999999   999999999999999766 8999999999876


Q ss_pred             CCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH--------Hhh
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT--------MVT  410 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~--------~~~  410 (521)
                      .....  .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ...+......        .+.
T Consensus       182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~  258 (330)
T 3nsz_A          182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYID  258 (330)
T ss_dssp             CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHH
T ss_pred             CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHH
Confidence            54332  334578999999999876 67999999999999999999999999543221 1111111100        000


Q ss_pred             cccc--------------ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          411 NRNA--------------EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       411 ~~~~--------------~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....              ...................+.+++.+||+.||++|||+.|++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000              00000001111111123445668889999999999999999853


No 214
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=7.9e-42  Score=338.15  Aligned_cols=258  Identities=24%  Similarity=0.377  Sum_probs=197.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc--CCc--EEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE--DNT--NVAVKNLLNN---RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      ..++|++.+.||+|+||+||+|.+.  +++  .||+|.+...   .....+.+.+|+++++.++||||+++++++.... 
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence            4468999999999999999999864  233  5899988654   2344577889999999999999999999998765 


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      .++||||+++++|.+++...   ...+++..++.++.|++.||.|||++   +|+||||||+|||++.++.+||+|||++
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~  168 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLM  168 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccc
Confidence            88999999999999999764   24689999999999999999999999   9999999999999999999999999999


Q ss_pred             eecCCCCcce--eecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          337 KLLGAERSYV--TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       337 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      ..........  .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....      ..+.+........
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~~  242 (291)
T 1u46_A          169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKEGE  242 (291)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTSCC
T ss_pred             ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC------HHHHHHHHHccCC
Confidence            8875433221  234567889999999988889999999999999999999 999996442      2222333222211


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      .     .. .....+..   +.+++.+||+.||++||++.++++.|+...
T Consensus       243 ~-----~~-~~~~~~~~---l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          243 R-----LP-RPEDCPQD---IYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             C-----CC-CCTTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             C-----CC-CCcCcCHH---HHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            0     00 11123333   445888999999999999999999998653


No 215
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=2.9e-42  Score=343.10  Aligned_cols=264  Identities=23%  Similarity=0.380  Sum_probs=185.6

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      +.+..++|.+.+.||+|+||.||+|.+. +++.||||.+.... ....+.+.+|+.+++.++||||+++++++......+
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            3556789999999999999999999854 68899999886443 234567888999999999999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcC----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          259 LVYEYIDNGNLEQWLHGD----VGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~----~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      +||||+++++|.+++...    ......+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence            999999999999998641    11235689999999999999999999998   99999999999999999999999999


Q ss_pred             cceecCCCCc----ceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          335 LAKLLGAERS----YVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       335 la~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      ++........    .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......   .   .....
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~---~~~~~  240 (303)
T 2vwi_A          167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---V---LMLTL  240 (303)
T ss_dssp             HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---H---HHHHH
T ss_pred             chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---H---HHHHh
Confidence            9986543221    11234579999999999865 568999999999999999999999997543221   1   11111


Q ss_pred             hcccc---ccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          410 TNRNA---EGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       410 ~~~~~---~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .....   ....++.... ..+.   .+.+++.+||+.||.+||++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          241 QNDPPSLETGVQDKEMLK-KYGK---SFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TSSCCCTTC-----CCCC-CCCH---HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccCCCccccccccchhhh-hhhH---HHHHHHHHHccCChhhCcCHHHHhh
Confidence            11100   0011111111 1233   3445888999999999999999985


No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=1.1e-41  Score=342.89  Aligned_cols=251  Identities=22%  Similarity=0.363  Sum_probs=196.2

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG--------QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH  256 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~  256 (521)
                      ++|.+.+.||+|+||.||+|.+. +++.||||.+.....        .....+..|+++++.++||||+++++++..+. 
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence            47899999999999999999975 578899999865321        12245788999999999999999999987655 


Q ss_pred             eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC---ceEeec
Q 009979          257 RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN---PKLSDF  333 (521)
Q Consensus       257 ~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~---vkL~DF  333 (521)
                      .++||||+++++|.+++...    ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.   +||+||
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df  161 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN----KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF  161 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred             eEEEEecCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence            89999999999999998754    5789999999999999999999998   9999999999999987654   999999


Q ss_pred             ccceecCCCCcceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhh
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVT  410 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~  410 (521)
                      |+++.....  .......||+.|+|||++.   ...++.++|||||||++|+|++|+.||.......  .+...+..   
T Consensus       162 g~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~---  234 (322)
T 2ycf_A          162 GHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKDQITS---  234 (322)
T ss_dssp             TTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHHHHHH---
T ss_pred             ccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHHHHHh---
Confidence            999876432  2223457999999999873   5678999999999999999999999997554322  22222211   


Q ss_pred             ccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          411 NRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       411 ~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       ....  ..+..    .......+.+++.+||+.||++||++.+++++
T Consensus       235 -~~~~--~~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          235 -GKYN--FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             -TCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             -Cccc--cCchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence             1100  00100    11122345568889999999999999999853


No 217
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=2.5e-41  Score=343.58  Aligned_cols=262  Identities=21%  Similarity=0.319  Sum_probs=205.7

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhh-----------------HHHHHHHHHHHhcCCCCCe
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQA-----------------EKEFKVEVEAIGRVRHKNL  244 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~Ei~~l~~l~hpni  244 (521)
                      ....++|++.+.||+|+||.||+|.+ +++.||+|.+.......                 .+.+.+|+++++.++||||
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           27 DKYINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             CEEETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             ccccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            34457899999999999999999999 89999999986432211                 1789999999999999999


Q ss_pred             eeEEEEEeeCCeeeEEEEeccCCchHHh------hhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCC
Q 009979          245 VRLLGYCAEGAHRMLVYEYIDNGNLEQW------LHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE-GLEPKVVHRDIKS  317 (521)
Q Consensus       245 v~l~~~~~~~~~~~lV~e~~~~g~L~~~------l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~~iiHrDik~  317 (521)
                      +++++++.+....++||||+++|+|.++      +...  ....+++..++.++.|++.||+|||+ .   +|+||||||
T Consensus       106 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p  180 (348)
T 2pml_X          106 LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKP  180 (348)
T ss_dssp             CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCG
T ss_pred             ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCCh
Confidence            9999999999999999999999999998      5442  24689999999999999999999998 8   999999999


Q ss_pred             CCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccCC-CCCC-cccchhHHHHHHHHHhCCCCCCCCCC
Q 009979          318 SNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG-MLNE-RSDVYSFGILIMEVISGRNPVDYSRP  395 (521)
Q Consensus       318 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwS~Gvvl~elltG~~Pf~~~~~  395 (521)
                      +|||++.++.+||+|||++......   ......||+.|+|||.+.+. .++. ++|||||||++|||++|+.||.....
T Consensus       181 ~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  257 (348)
T 2pml_X          181 SNILMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS  257 (348)
T ss_dssp             GGEEECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             HhEEEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            9999999999999999999876433   34456799999999999877 6666 99999999999999999999975433


Q ss_pred             CCcccHHHHHHHHhhccccccC------CCcccCC---CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          396 PGEVNLVEWLKTMVTNRNAEGV------LDPRLQE---KPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~------~d~~l~~---~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .     .+....... ......      ..+....   .........+.+++.+||+.||.+||++.+++++
T Consensus       258 ~-----~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h  323 (348)
T 2pml_X          258 L-----VELFNNIRT-KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH  323 (348)
T ss_dssp             S-----HHHHHHHTS-CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             H-----HHHHHHHhc-cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1     122222221 111000      0000000   0001122344558889999999999999999864


No 218
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.1e-41  Score=350.89  Aligned_cols=261  Identities=25%  Similarity=0.334  Sum_probs=194.1

Q ss_pred             CCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC------eeeE
Q 009979          186 NGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA------HRML  259 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~------~~~l  259 (521)
                      .+|++.+.||+|+||+||+|.+..+..||+|++......    ..+|+++|+.++||||+++++++....      ..++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            479999999999999999999987778999998754332    235999999999999999999986543      3789


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-CCCCceEeeccccee
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-KQWNPKLSDFGLAKL  338 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-~~~~vkL~DFGla~~  338 (521)
                      ||||+++ ++...+.........+++..+..++.|++.||+|||+.   +|+||||||+|||++ .++.+||+|||+++.
T Consensus       116 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          116 VLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            9999987 44444332212246789999999999999999999999   999999999999998 799999999999997


Q ss_pred             cCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH-------h-
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM-------V-  409 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~-------~-  409 (521)
                      ......  .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......  ..+.+.++..       + 
T Consensus       192 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~~~~  267 (394)
T 4e7w_A          192 LIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--DQLVEIIKVLGTPSREQIK  267 (394)
T ss_dssp             CCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHH
T ss_pred             ccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHH
Confidence            644332  2345789999999998664 5999999999999999999999999754311  1111211110       0 


Q ss_pred             -hccccccCCCcccCCCccH-----HHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          410 -TNRNAEGVLDPRLQEKPCS-----RALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       410 -~~~~~~~~~d~~l~~~~~~-----~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       .........-+.....+..     .....+.+++.+||+.||++|||+.|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence             0001111111111111111     122356668889999999999999999854


No 219
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4.3e-41  Score=344.68  Aligned_cols=262  Identities=22%  Similarity=0.321  Sum_probs=200.2

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC-----Cee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG-----AHR  257 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~-----~~~  257 (521)
                      .++|++.+.||+|+||.||+|.+. ++..||||++.... ....+.+.+|+++++.++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            358999999999999999999975 57789999987543 33347788999999999999999999999765     367


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||++ |+|.+++...     .+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence            99999997 5999998754     589999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcce--eeccccccccccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          338 LLGAERSYV--TTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       338 ~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      .........  .....||+.|+|||++. +..++.++|||||||++|||++|+.||.......   ....+.........
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQ  253 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCH
Confidence            765432221  24468999999999864 4568999999999999999999999997554222   11111111100000


Q ss_pred             ---------------ccCCCcccCC--CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          415 ---------------EGVLDPRLQE--KPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       415 ---------------~~~~d~~l~~--~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                                     .....+....  ...+.....+.+++.+||+.||++|||+.|++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                           0000000000  0001112345668889999999999999999854


No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=2.5e-41  Score=337.08  Aligned_cols=250  Identities=22%  Similarity=0.318  Sum_probs=197.5

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCeeeEEEEEe--eCCeee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR----GQAEKEFKVEVEAIGRVRHKNLVRLLGYCA--EGAHRM  258 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~--~~~~~~  258 (521)
                      ++|.+.+.||+|+||.||+|.+. ++..||+|.+....    ......+.+|+++++.++||||+++++++.  +....+
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            58999999999999999999964 57899999986542    234577899999999999999999999984  455789


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      +||||++++ |.+++....  ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||++..
T Consensus        85 lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence            999999875 777776542  45789999999999999999999999   999999999999999999999999999987


Q ss_pred             cCCC-CcceeecccccccccccccccCCC--CCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          339 LGAE-RSYVTTRVMGTFGYVAPEYASTGM--LNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       339 ~~~~-~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      .... .........||+.|+|||++.+..  ++.++||||||+++|||++|+.||....      ..+........ .. 
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~-~~-  230 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIGKG-SY-  230 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHC-CC-
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHhcC-CC-
Confidence            6432 222234567999999999987643  4779999999999999999999996432      22222222221 10 


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                           .+. ..++..   +.+++.+||+.||.+|||+.+++++
T Consensus       231 -----~~~-~~~~~~---l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          231 -----AIP-GDCGPP---LSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -----CCC-SSSCHH---HHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -----CCC-CccCHH---HHHHHHHHccCChhhCCCHHHHhcC
Confidence                 111 113333   4458889999999999999999864


No 221
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.9e-41  Score=372.38  Aligned_cols=262  Identities=22%  Similarity=0.377  Sum_probs=206.9

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEcC----CcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEe
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLED----NTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCA  252 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~  252 (521)
                      ..++++..++|++.+.||+|+||.||+|.+..    +..||+|.+.... ....+.+..|+.+++.++||||+++++++.
T Consensus       382 ~~~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~  461 (656)
T 2j0j_A          382 TRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT  461 (656)
T ss_dssp             GGGTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            34556677889999999999999999999742    4568999886543 334477899999999999999999999985


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEee
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSD  332 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~D  332 (521)
                      + +..++||||+++|+|.++++..   ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~D  534 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD  534 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEe
Confidence            4 5689999999999999999865   34689999999999999999999999   999999999999999999999999


Q ss_pred             cccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHhhc
Q 009979          333 FGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMVTN  411 (521)
Q Consensus       333 FGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~  411 (521)
                      ||+++..............||+.|+|||++.+..++.++|||||||++|||++ |..||.....      .+.+......
T Consensus       535 FG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~------~~~~~~i~~~  608 (656)
T 2j0j_A          535 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN------NDVIGRIENG  608 (656)
T ss_dssp             CCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHHT
T ss_pred             cCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHcC
Confidence            99998775544444445667899999999998999999999999999999997 9999964321      2222222221


Q ss_pred             cccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhcc
Q 009979          412 RNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAE  462 (521)
Q Consensus       412 ~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~  462 (521)
                      ...      .+. ..++..   +.+++.+||+.||++||++.++++.|+..
T Consensus       609 ~~~------~~~-~~~~~~---l~~li~~~l~~dP~~RPs~~el~~~L~~i  649 (656)
T 2j0j_A          609 ERL------PMP-PNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI  649 (656)
T ss_dssp             CCC------CCC-TTCCHH---HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC------CCC-ccccHH---HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            110      111 123333   44588899999999999999999999764


No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2.9e-41  Score=353.60  Aligned_cols=200  Identities=21%  Similarity=0.291  Sum_probs=173.9

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcC------CCCCeeeEEEEEeeCC
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV------RHKNLVRLLGYCAEGA  255 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l------~hpniv~l~~~~~~~~  255 (521)
                      ....+|++.+.||+|+||+||+|.+. +++.||||++... ......+..|+++++.+      +|+||+++++++....
T Consensus        94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  172 (429)
T 3kvw_A           94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN  172 (429)
T ss_dssp             EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred             cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence            34568999999999999999999976 4788999998653 33345677788888776      5779999999999999


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC--ceEeec
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN--PKLSDF  333 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~--vkL~DF  333 (521)
                      ..++||||+. ++|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.  +||+||
T Consensus       173 ~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          173 HICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             eEEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence            9999999996 59999998762  34689999999999999999999999   9999999999999999887  999999


Q ss_pred             ccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      |+++.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       247 G~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          247 GSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             TTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence            999865332    23457999999999999999999999999999999999999999754


No 223
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=4.9e-41  Score=336.61  Aligned_cols=260  Identities=20%  Similarity=0.337  Sum_probs=200.7

Q ss_pred             cchhhhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCeeeEEEEE
Q 009979          176 YTLRELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVR--HKNLVRLLGYC  251 (521)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~--hpniv~l~~~~  251 (521)
                      +.+..+.+..++|++.+.||+|+||.||+|.+.+++.||+|++...  .....+.+.+|+++++.++  ||||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            3456667778899999999999999999999888999999998654  3344577899999999997  59999999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEe
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLS  331 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~  331 (521)
                      .+....++||| +.+++|.+++...    ..+++..++.++.|++.||.|||+.   +|+||||||+|||+++ +.+||+
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~  168 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLI  168 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEEC
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEe
Confidence            99999999999 5578999999865    4789999999999999999999999   9999999999999965 789999


Q ss_pred             ecccceecCCCCcc-eeecccccccccccccccC-----------CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 009979          332 DFGLAKLLGAERSY-VTTRVMGTFGYVAPEYAST-----------GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEV  399 (521)
Q Consensus       332 DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~  399 (521)
                      |||+++........ ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||....     
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----  243 (313)
T 3cek_A          169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----  243 (313)
T ss_dssp             CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----
T ss_pred             eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----
Confidence            99999876433222 2234579999999999865           478889999999999999999999996432     


Q ss_pred             cHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          400 NLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .....+........     ...+.. .++.   .+.+++.+||+.||++||++.++++.
T Consensus       244 ~~~~~~~~~~~~~~-----~~~~~~-~~~~---~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          244 NQISKLHAIIDPNH-----EIEFPD-IPEK---DLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             SHHHHHHHHHCTTS-----CCCCCC-CSCH---HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHHhccc-----ccCCcc-cchH---HHHHHHHHHccCCcccCcCHHHHhcC
Confidence            12222222222111     111111 1233   34458889999999999999999854


No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=4.6e-41  Score=339.38  Aligned_cols=264  Identities=18%  Similarity=0.271  Sum_probs=203.8

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEE-c-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC------CeeeEEEEE
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVL-E-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHK------NLVRLLGYC  251 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hp------niv~l~~~~  251 (521)
                      ..++..++|++.+.||+|+||.||+|.+ . +++.||+|++... ....+.+..|+++++.++|+      +++++++++
T Consensus         8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~   86 (339)
T 1z57_A            8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF   86 (339)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred             cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence            3445567999999999999999999987 3 5788999998643 33456788899999988665      499999999


Q ss_pred             eeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC-------
Q 009979          252 AEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK-------  324 (521)
Q Consensus       252 ~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~-------  324 (521)
                      .+....++||||+ +++|.+++....  ..++++..++.++.|++.||+|||++   +|+||||||+|||++.       
T Consensus        87 ~~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~  160 (339)
T 1z57_A           87 EHHGHICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAY  160 (339)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEE
T ss_pred             ccCCcEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccccc
Confidence            9999999999999 889999998752  34789999999999999999999999   9999999999999987       


Q ss_pred             ------------CCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 009979          325 ------------QWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDY  392 (521)
Q Consensus       325 ------------~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~  392 (521)
                                  ++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       161 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  236 (339)
T 1z57_A          161 NPKIKRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT  236 (339)
T ss_dssp             C----CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCccccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                        678999999999875332    2345789999999999999999999999999999999999999975


Q ss_pred             CCCCCcccHHHHHHHHhhc--------cccccC---------------------CCccc-CCCccHHHHHHHHHHHHhcc
Q 009979          393 SRPPGEVNLVEWLKTMVTN--------RNAEGV---------------------LDPRL-QEKPCSRALKRALLVALRCV  442 (521)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~--------~~~~~~---------------------~d~~l-~~~~~~~~~~~~~~li~~cl  442 (521)
                      ....   .....+......        ......                     ..+.. ...........+.+++.+||
T Consensus       237 ~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  313 (339)
T 1z57_A          237 HDSK---EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML  313 (339)
T ss_dssp             SCHH---HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHT
T ss_pred             CChH---HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHh
Confidence            4321   111111111100        000000                     00000 00011233455667899999


Q ss_pred             CCCCCCCCCHHHHHH
Q 009979          443 DPNAHKRPKMGHVIH  457 (521)
Q Consensus       443 ~~dP~~RPt~~evl~  457 (521)
                      +.||++|||+.|+++
T Consensus       314 ~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          314 EYDPAKRITLREALK  328 (339)
T ss_dssp             CSSTTTSCCHHHHTT
T ss_pred             CcCcccccCHHHHhc
Confidence            999999999999974


No 225
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=1.1e-40  Score=343.87  Aligned_cols=207  Identities=23%  Similarity=0.304  Sum_probs=176.1

Q ss_pred             hhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CC-----CeeeEEEE
Q 009979          178 LRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HK-----NLVRLLGY  250 (521)
Q Consensus       178 ~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hp-----niv~l~~~  250 (521)
                      +...+...++|++.+.||+|+||+||+|.+. +++.||||++... ......+..|+++++.++ |+     +|++++++
T Consensus        46 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  124 (382)
T 2vx3_A           46 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRH  124 (382)
T ss_dssp             CCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEE
T ss_pred             eecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeee
Confidence            4445556789999999999999999999976 5778999998643 334566778999988885 44     49999999


Q ss_pred             EeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC--CCCCc
Q 009979          251 CAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD--KQWNP  328 (521)
Q Consensus       251 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~--~~~~v  328 (521)
                      +......++||||+. |+|.+++....  ...+++..+..++.|++.||.|||++ +.+|+||||||+|||++  .++.+
T Consensus       125 ~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~  200 (382)
T 2vx3_A          125 FMFRNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI  200 (382)
T ss_dssp             EEETTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred             eccCCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence            999999999999996 59999998752  35689999999999999999999952 23899999999999994  57889


Q ss_pred             eEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          329 KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                      ||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus       201 kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          201 KIVDFGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             EECCCTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             EEEeccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999876432    23467999999999999999999999999999999999999999754


No 226
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=5e-41  Score=333.68  Aligned_cols=251  Identities=26%  Similarity=0.407  Sum_probs=191.3

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee-----------
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE-----------  253 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~-----------  253 (521)
                      ++|++.+.||+|+||.||+|... +++.||||.+... ....+.+.+|+++++.++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            46899999999999999999975 6889999998543 3445778899999999999999999998865           


Q ss_pred             --CCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEe
Q 009979          254 --GAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLS  331 (521)
Q Consensus       254 --~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~  331 (521)
                        ....++||||+++|+|.+++...   ...+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence              35679999999999999999864   34678899999999999999999999   99999999999999999999999


Q ss_pred             ecccceecCCCC-------------cceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCC
Q 009979          332 DFGLAKLLGAER-------------SYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPG  397 (521)
Q Consensus       332 DFGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~  397 (521)
                      |||+++......             ........||+.|+|||++.+. .++.++|||||||++|||++   ||..     
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~-----  230 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST-----  230 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS-----
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC-----
Confidence            999998754221             1122345799999999998764 78999999999999999998   5531     


Q ss_pred             cccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .....+....... ..  ....+.+    .......+.+++.+||+.||.+|||+.+++++
T Consensus       231 ~~~~~~~~~~~~~-~~--~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          231 GMERVNILKKLRS-VS--IEFPPDF----DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHHHHHHHHHHS-TT--CCCCTTC----CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             chhHHHHHHhccc-cc--cccCccc----cccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            1122222222221 11  1111111    12222334558889999999999999999864


No 227
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.7e-41  Score=346.60  Aligned_cols=258  Identities=22%  Similarity=0.326  Sum_probs=181.7

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC------C
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN--RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG------A  255 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~------~  255 (521)
                      .++|++.+.||+|+||.||+|.+. +++.||||++...  .....+.+.+|+++++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            368999999999999999999965 5889999998653  233456788999999999999999999998654      5


Q ss_pred             eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          256 HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       256 ~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                      ..|+||||+ +++|.+++..     ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred             eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence            679999999 6799998864     3689999999999999999999998   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc-
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN-  413 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~-  413 (521)
                      ++.....    .+...||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....   ......+........ 
T Consensus       179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~l~~i~~~~g~p~~  251 (367)
T 2fst_X          179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH---IDQLKLILRLVGTPGA  251 (367)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCSCCH
T ss_pred             ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCCH
Confidence            9865322    344679999999999876 6799999999999999999999999965432   111111111111000 


Q ss_pred             --cccCCC----------cccCCCcc----HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          414 --AEGVLD----------PRLQEKPC----SRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       414 --~~~~~d----------~~l~~~~~----~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                        ...+..          +.......    ......+.+|+.+||+.||++|||+.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence              000000          00000000    0112345668889999999999999999854


No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.8e-41  Score=350.09  Aligned_cols=202  Identities=22%  Similarity=0.363  Sum_probs=155.2

Q ss_pred             Cccc-cceEccCCcEEEEEEEEc---CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee--CCeeeEE
Q 009979          187 GFAD-ENVIGEGGYGIVYHGVLE---DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE--GAHRMLV  260 (521)
Q Consensus       187 ~~~~-~~~LG~G~fG~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~--~~~~~lV  260 (521)
                      .|.+ .++||+|+||+||+|.+.   ++..||+|++....  ....+.+|+++|+.++||||+++++++..  ....++|
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv   98 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   98 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence            4555 458999999999999975   47789999986543  23567889999999999999999999954  6788999


Q ss_pred             EEeccCCchHHhhhcCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----CCCCCceEe
Q 009979          261 YEYIDNGNLEQWLHGDV-----GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL----DKQWNPKLS  331 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl----~~~~~vkL~  331 (521)
                      |||+. |+|.+++....     .....+++..++.++.|++.||+|||+.   +|+||||||+||||    +.++.+||+
T Consensus        99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~  174 (405)
T 3rgf_A           99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA  174 (405)
T ss_dssp             EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred             EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence            99996 58888875321     1223589999999999999999999999   99999999999999    778899999


Q ss_pred             ecccceecCCCCc--ceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCC
Q 009979          332 DFGLAKLLGAERS--YVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSR  394 (521)
Q Consensus       332 DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~  394 (521)
                      |||+++.+.....  ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            9999987643221  22345689999999999877 459999999999999999999999997543


No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=333.64  Aligned_cols=259  Identities=22%  Similarity=0.352  Sum_probs=193.1

Q ss_pred             CCCccccceEccCCcEEEEEEEEcC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEe-----------
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCA-----------  252 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~-----------  252 (521)
                      .++|.+.+.||+|+||.||+|.+.. ++.||+|++........+.+.+|+++++.++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4689999999999999999999864 8899999998776666788999999999999999999999873           


Q ss_pred             ---eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-CCCCc
Q 009979          253 ---EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-KQWNP  328 (521)
Q Consensus       253 ---~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-~~~~v  328 (521)
                         +....++||||++ |+|.+++..     ..+++..++.++.|++.||+|||+.   +|+||||||+|||++ +++.+
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~  160 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL  160 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence               3467899999997 599999864     4688999999999999999999999   999999999999997 56789


Q ss_pred             eEeecccceecCCCCc--ceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHH
Q 009979          329 KLSDFGLAKLLGAERS--YVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWL  405 (521)
Q Consensus       329 kL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~  405 (521)
                      ||+|||+++.......  .......||..|+|||.+.+ ..++.++|||||||++|||++|+.||.....      .+..
T Consensus       161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~  234 (320)
T 2i6l_A          161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE------LEQM  234 (320)
T ss_dssp             EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH
T ss_pred             EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence            9999999987643211  12234567999999998765 6789999999999999999999999975432      1111


Q ss_pred             HHHhhcccc------------------ccCCCcccCC-CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          406 KTMVTNRNA------------------EGVLDPRLQE-KPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       406 ~~~~~~~~~------------------~~~~d~~l~~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      .........                  .....+.... .........+.+++.+||+.||++|||+.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          235 QLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            111110000                  0000000000 0001122345568889999999999999999853


No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.3e-40  Score=329.33  Aligned_cols=250  Identities=23%  Similarity=0.338  Sum_probs=200.4

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .++|++.+.||+|+||.||+|... +++.||+|++....  ....+.+.+|++++++++||||+++++++.+....++||
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            358999999999999999999976 68899999986532  234577889999999999999999999999999999999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC---CCceEeeccccee
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ---WNPKLSDFGLAKL  338 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~---~~vkL~DFGla~~  338 (521)
                      ||+++++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++.+   +.+||+|||++..
T Consensus       101 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~  173 (287)
T 2wei_A          101 ELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (287)
T ss_dssp             CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred             EccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence            999999999988764    4689999999999999999999999   99999999999999754   4699999999986


Q ss_pred             cCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCC
Q 009979          339 LGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVL  418 (521)
Q Consensus       339 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (521)
                      .....  ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||....      ..+.......... . ..
T Consensus       174 ~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~-~-~~  242 (287)
T 2wei_A          174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKY-A-FD  242 (287)
T ss_dssp             BCCCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCC-C-CC
T ss_pred             ecCCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCC-C-CC
Confidence            54332  2234568999999998865 48999999999999999999999996432      2222232222111 0 00


Q ss_pred             CcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          419 DPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       419 d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .+..  ...+   ..+.+++.+||+.||++|||+.++++
T Consensus       243 ~~~~--~~~~---~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          243 LPQW--RTIS---DDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             SGGG--TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhh--hhcC---HHHHHHHHHHcccChhhCcCHHHHhc
Confidence            0000  1122   34455888999999999999999986


No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=2.7e-40  Score=332.68  Aligned_cols=263  Identities=26%  Similarity=0.363  Sum_probs=197.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEE--cCCcEEEEEEeccCChh--hHHHHHHHHHHHhcC---CCCCeeeEEEEEe----
Q 009979          184 STNGFADENVIGEGGYGIVYHGVL--EDNTNVAVKNLLNNRGQ--AEKEFKVEVEAIGRV---RHKNLVRLLGYCA----  252 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l---~hpniv~l~~~~~----  252 (521)
                      ..++|++.+.||+|+||.||+|.+  .+++.||+|++......  ....+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            346899999999999999999997  35788999998643221  223456677777666   8999999999987    


Q ss_pred             -eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEe
Q 009979          253 -EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLS  331 (521)
Q Consensus       253 -~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~  331 (521)
                       .....++||||++ |+|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence             5567899999997 59999998753  34589999999999999999999999   99999999999999999999999


Q ss_pred             ecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhc
Q 009979          332 DFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTN  411 (521)
Q Consensus       332 DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~  411 (521)
                      |||+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....   ......+......
T Consensus       163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~  237 (326)
T 1blx_A          163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGL  237 (326)
T ss_dssp             SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCC
T ss_pred             cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHcCC
Confidence            999998754322  23446789999999999999999999999999999999999999974431   1111111111110


Q ss_pred             cccccC----CCc--ccC-------CCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          412 RNAEGV----LDP--RLQ-------EKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       412 ~~~~~~----~d~--~l~-------~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ......    ..+  .+.       ..........+.+++.+||+.||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000000    000  000       0000112233445888999999999999999984


No 232
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=6.7e-41  Score=342.04  Aligned_cols=266  Identities=19%  Similarity=0.244  Sum_probs=186.5

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe----
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH----  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~----  256 (521)
                      ....++|.+.+.||+|+||.||+|.+. ++..||||++...... ...+..+++.++.++||||+++++++.....    
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            345578999999999999999999975 5889999998654332 3445668888899999999999999865433    


Q ss_pred             ---eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeeecCCCCCCeEeCC-CCCceE
Q 009979          257 ---RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH--EGLEPKVVHRDIKSSNILLDK-QWNPKL  330 (521)
Q Consensus       257 ---~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH--~~~~~~iiHrDik~~NILl~~-~~~vkL  330 (521)
                         .++||||+++ +|...+.........+++..+..++.|++.||.|||  +.   +|+||||||+|||++. ++.+||
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEE
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEE
Confidence               7899999976 655554432223467899999999999999999999  77   9999999999999996 899999


Q ss_pred             eecccceecCCCCcceeecccccccccccccccCC-CCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHh
Q 009979          331 SDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTG-MLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       331 ~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      +|||+++......  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......   .....+....
T Consensus       174 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~---~~~~~~~~~~  248 (360)
T 3e3p_A          174 CDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA---GQLHEIVRVL  248 (360)
T ss_dssp             CCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHH
T ss_pred             eeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH---HHHHHHHHHc
Confidence            9999998765433  23345789999999988654 4899999999999999999999999754321   1111111111


Q ss_pred             hc------------cccccCCCcc------cCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          410 TN------------RNAEGVLDPR------LQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       410 ~~------------~~~~~~~d~~------l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ..            .......+..      ............+.+++.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            00            0000000000      000001112345667889999999999999999984


No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=2e-40  Score=336.05  Aligned_cols=253  Identities=19%  Similarity=0.255  Sum_probs=171.6

Q ss_pred             CCCcccc-ceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee----CCeee
Q 009979          185 TNGFADE-NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE----GAHRM  258 (521)
Q Consensus       185 ~~~~~~~-~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~----~~~~~  258 (521)
                      .++|.+. +.||+|+||.||+|.+. +++.||||++....    .........++.+.||||+++++++..    ....+
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            3478885 46999999999999976 68899999986532    222223344667799999999999876    45579


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCceEeeccc
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPKLSDFGL  335 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~vkL~DFGl  335 (521)
                      +||||+++|+|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||+
T Consensus       103 lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence            9999999999999998652  35799999999999999999999999   9999999999999976   45599999999


Q ss_pred             ceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAE  415 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  415 (521)
                      ++.....   ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.........   ............ 
T Consensus       178 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~-  250 (336)
T 3fhr_A          178 AKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQY-  250 (336)
T ss_dssp             CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred             ceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhcccc-
Confidence            9875432   233457899999999998889999999999999999999999999654322110   000111100000 


Q ss_pred             cCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          416 GVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       416 ~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ....+  .....+.   .+.+++.+||+.||++|||+.+++++
T Consensus       251 ~~~~~--~~~~~~~---~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          251 GFPNP--EWSEVSE---DAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             CCCTT--TSTTCCH---HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccCch--hhccCCH---HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            00000  0011233   34558889999999999999999864


No 234
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=2.1e-40  Score=337.48  Aligned_cols=262  Identities=20%  Similarity=0.307  Sum_probs=197.3

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeC-----Cee
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEG-----AHR  257 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~-----~~~  257 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+++++.++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            468999999999999999999976 58889999986543 33446788999999999999999999998764     678


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ++||||+. ++|.+++...     .+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++
T Consensus        90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR  160 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence            99999997 5999998753     689999999999999999999999   99999999999999999999999999998


Q ss_pred             ecCCCCcc---------eeeccccccccccccccc-CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          338 LLGAERSY---------VTTRVMGTFGYVAPEYAS-TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       338 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ........         ......||+.|+|||++. +..++.++|||||||++|||++|+.||......   .....+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~  237 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR---HQLLLIFG  237 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHH
T ss_pred             ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH---HHHHHHHH
Confidence            76432211         122357899999999875 477899999999999999999999999754311   11111111


Q ss_pred             HhhccccccCC----C----------cccCCCc----cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          408 MVTNRNAEGVL----D----------PRLQEKP----CSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       408 ~~~~~~~~~~~----d----------~~l~~~~----~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      ...........    .          +......    .+.....+.+++.+||+.||++|||+.+++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            11000000000    0          0000000    01122345568889999999999999999853


No 235
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=1.7e-40  Score=341.18  Aligned_cols=254  Identities=23%  Similarity=0.346  Sum_probs=194.2

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCee----
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHR----  257 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~----  257 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||||++....  ....+.+.+|+.+++.++||||+++++++......    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            368999999999999999999975 58899999997542  33357788999999999999999999999877655    


Q ss_pred             --eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          258 --MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       258 --~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                        ++||||+. ++|.+++.      ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+
T Consensus       121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence              99999997 59988874      3489999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccc
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNA  414 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  414 (521)
                      ++.....    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....      .+.+.........
T Consensus       191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~~~~~  260 (371)
T 4exu_A          191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY------LDQLTQILKVTGV  260 (371)
T ss_dssp             C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHHHCC
T ss_pred             ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHHHhCC
Confidence            9865332    344678999999999877 7899999999999999999999999964321      1111111110000


Q ss_pred             ------ccC-----------CCcccCCC---ccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          415 ------EGV-----------LDPRLQEK---PCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       415 ------~~~-----------~d~~l~~~---~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                            ..+           +.......   ..+.....+.+++.+||+.||++|||+.|++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          261 PGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             CCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence                  000           00000000   001112345668889999999999999999854


No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=4e-40  Score=337.76  Aligned_cols=265  Identities=20%  Similarity=0.267  Sum_probs=199.6

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----------CCCeeeEEEEE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-----------HKNLVRLLGYC  251 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------hpniv~l~~~~  251 (521)
                      ..++|.+.+.||+|+||+||+|.+. +++.||||++... ....+.+..|+++++.++           ||||+++++++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~   95 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   95 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence            4568999999999999999999974 6888999998643 334567888999999886           89999999998


Q ss_pred             eeCC----eeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC----
Q 009979          252 AEGA----HRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD----  323 (521)
Q Consensus       252 ~~~~----~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~----  323 (521)
                      ....    ..++||||+ +++|.+++....  ...+++..++.++.|++.||+|||+++  +|+||||||+|||++    
T Consensus        96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~  170 (373)
T 1q8y_A           96 NHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS  170 (373)
T ss_dssp             EEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred             hccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence            7654    789999999 889999998752  346899999999999999999999843  899999999999994    


Q ss_pred             --CCCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccH
Q 009979          324 --KQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNL  401 (521)
Q Consensus       324 --~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~  401 (521)
                        ..+.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........
T Consensus       171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  246 (373)
T 1q8y_A          171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD  246 (373)
T ss_dssp             TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred             CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence              4457999999999876432    2345789999999999999999999999999999999999999976543222212


Q ss_pred             HHHHHHHhhc-cc-----------------cccCCCc----cc---------CCCccHHHHHHHHHHHHhccCCCCCCCC
Q 009979          402 VEWLKTMVTN-RN-----------------AEGVLDP----RL---------QEKPCSRALKRALLVALRCVDPNAHKRP  450 (521)
Q Consensus       402 ~~~~~~~~~~-~~-----------------~~~~~d~----~l---------~~~~~~~~~~~~~~li~~cl~~dP~~RP  450 (521)
                      .+.+...... +.                 .......    ..         ...........+.+++.+||+.||++||
T Consensus       247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  326 (373)
T 1q8y_A          247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA  326 (373)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred             HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence            2222211110 00                 0000000    00         0012244556777899999999999999


Q ss_pred             CHHHHHHH
Q 009979          451 KMGHVIHM  458 (521)
Q Consensus       451 t~~evl~~  458 (521)
                      |+.|++++
T Consensus       327 t~~ell~h  334 (373)
T 1q8y_A          327 DAGGLVNH  334 (373)
T ss_dssp             CHHHHHTC
T ss_pred             CHHHHhhC
Confidence            99999853


No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=1.5e-40  Score=335.22  Aligned_cols=261  Identities=28%  Similarity=0.378  Sum_probs=179.6

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh-hhHHHHHHHHH-HHhcCCCCCeeeEEEEEeeCCee
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-QAEKEFKVEVE-AIGRVRHKNLVRLLGYCAEGAHR  257 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~-~l~~l~hpniv~l~~~~~~~~~~  257 (521)
                      +++..++|++.+.||+|+||.||+|.+. +++.||||++..... .....+..|+. +++.++||||+++++++.+.+..
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~   96 (327)
T 3aln_A           17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDC   96 (327)
T ss_dssp             ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEE
T ss_pred             cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCce
Confidence            4566789999999999999999999975 688999999976432 33345555665 77888999999999999999999


Q ss_pred             eEEEEeccCCchHHhhhcCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccc
Q 009979          258 MLVYEYIDNGNLEQWLHGDV-GPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLA  336 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla  336 (521)
                      ++||||+++ +|.+++.... .....+++..+..++.|++.||.|||+..  +|+||||||+|||++.++.+||+|||++
T Consensus        97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~  173 (327)
T 3aln_A           97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGIS  173 (327)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred             EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence            999999975 8888775311 11357899999999999999999999842  8999999999999999999999999999


Q ss_pred             eecCCCCcceeecccccccccccccc----cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYA----STGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      +......  ......||+.|+|||++    .+..++.++|||||||++|||++|+.||......     .+.+....   
T Consensus       174 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~---  243 (327)
T 3aln_A          174 GQLVDSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-----FDQLTQVV---  243 (327)
T ss_dssp             CC--------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCC---
T ss_pred             eeccccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-----HHHHHHHh---
Confidence            8764322  22344799999999998    4667899999999999999999999999643211     01000000   


Q ss_pred             ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          413 NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       413 ~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                         ....+.+...........+.+++.+||+.||++||++.++++
T Consensus       244 ---~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          244 ---KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ---CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence               001111111111112234455888999999999999999974


No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2.5e-41  Score=340.24  Aligned_cols=250  Identities=25%  Similarity=0.403  Sum_probs=199.4

Q ss_pred             chhhhhhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh------hHHHHHHHHHHHhcCC--CCCeeeE
Q 009979          177 TLRELEVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ------AEKEFKVEVEAIGRVR--HKNLVRL  247 (521)
Q Consensus       177 ~~~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~--hpniv~l  247 (521)
                      ...+.+...++|++.+.||+|+||.||+|.+. +++.||||.+......      ....+..|+.+++.++  |+||+++
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            34555667789999999999999999999964 6888999998654321      2245667999999996  5999999


Q ss_pred             EEEEeeCCeeeEEEEeccC-CchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-CC
Q 009979          248 LGYCAEGAHRMLVYEYIDN-GNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-KQ  325 (521)
Q Consensus       248 ~~~~~~~~~~~lV~e~~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-~~  325 (521)
                      ++++.+....++||||+.+ ++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++ ++
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~  186 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR  186 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence            9999999999999999976 8999999764    5689999999999999999999998   999999999999999 78


Q ss_pred             CCceEeecccceecCCCCcceeecccccccccccccccCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHH
Q 009979          326 WNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGML-NERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEW  404 (521)
Q Consensus       326 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~  404 (521)
                      +.+||+|||+++.....   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....        + 
T Consensus       187 ~~~kL~Dfg~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~-  254 (320)
T 3a99_A          187 GELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------E-  254 (320)
T ss_dssp             TEEEECCCTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H-
T ss_pred             CCEEEeeCccccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------h-
Confidence            89999999999876432   2234579999999999876665 678999999999999999999995321        1 


Q ss_pred             HHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 009979          405 LKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHML  459 (521)
Q Consensus       405 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L  459 (521)
                         .....   ..    +. ...+..   +.+++.+||+.||++|||+.++++.-
T Consensus       255 ---~~~~~---~~----~~-~~~~~~---~~~li~~~l~~dp~~Rps~~~ll~hp  295 (320)
T 3a99_A          255 ---IIRGQ---VF----FR-QRVSSE---CQHLIRWCLALRPSDRPTFEEIQNHP  295 (320)
T ss_dssp             ---HHHCC---CC----CS-SCCCHH---HHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             ---hhccc---cc----cc-ccCCHH---HHHHHHHHccCChhhCcCHHHHhcCH
Confidence               11110   01    11 112333   44588899999999999999998754


No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1e-40  Score=349.94  Aligned_cols=253  Identities=23%  Similarity=0.276  Sum_probs=186.6

Q ss_pred             CCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      +.|...+.||+|+||+||.+...+|+.||||++...   ..+.+..|+++++.+ +||||+++++++.++...+||||||
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            345667889999999998776678999999998653   235677899999876 8999999999999999999999999


Q ss_pred             cCCchHHhhhcCCCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCC-------------CCc
Q 009979          265 DNGNLEQWLHGDVGPHSP---LTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQ-------------WNP  328 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~---l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~-------------~~v  328 (521)
                      . |+|.+++.........   .++..++.++.|++.||+|||++   +|+||||||+|||++.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence            5 6999999865321111   12334578999999999999999   99999999999999654             479


Q ss_pred             eEeecccceecCCCCcc---eeecccccccccccccccC-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCC
Q 009979          329 KLSDFGLAKLLGAERSY---VTTRVMGTFGYVAPEYAST-------GMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPG  397 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~  397 (521)
                      ||+|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||+| |+.||...... 
T Consensus       168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-  246 (434)
T 2rio_A          168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR-  246 (434)
T ss_dssp             EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-
T ss_pred             EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-
Confidence            99999999987543322   1234679999999999865       678999999999999999999 99999643221 


Q ss_pred             cccHHHHHHHHhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          398 EVNLVEWLKTMVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                         ....    .....    ..+.............+.+++.+||+.||.+|||+.++++
T Consensus       247 ---~~~i----~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          247 ---ESNI----IRGIF----SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ---HHHH----HHTCC----CCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHHH----hcCCC----CcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence               1111    11110    0011111112344556677999999999999999999985


No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=6.8e-40  Score=334.16  Aligned_cols=256  Identities=22%  Similarity=0.315  Sum_probs=193.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe-----
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNR--GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH-----  256 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~-----  256 (521)
                      .++|.+.+.||+|+||.||+|.+. +++.||||++....  ....+.+.+|+.+++.++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            358999999999999999999975 58899999986542  2334678899999999999999999999987654     


Q ss_pred             -eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeeccc
Q 009979          257 -RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGL  335 (521)
Q Consensus       257 -~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGl  335 (521)
                       .++||||+. ++|.+++.      ..+++..++.++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus       103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~  172 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL  172 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred             eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence             499999997 59988774      2489999999999999999999999   999999999999999999999999999


Q ss_pred             ceecCCCCcceeecccccccccccccccC-CCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc--
Q 009979          336 AKLLGAERSYVTTRVMGTFGYVAPEYAST-GMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR--  412 (521)
Q Consensus       336 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--  412 (521)
                      ++.....    .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......   .....+.......  
T Consensus       173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~  245 (353)
T 3coi_A          173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGT  245 (353)
T ss_dssp             TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH---HHHHHHHHHHCBCCH
T ss_pred             ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCH
Confidence            9865322    234578999999998876 67899999999999999999999999754321   1111111110000  


Q ss_pred             ----------------ccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          413 ----------------NAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       413 ----------------~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                                      .......+.+.. ........+.+++.+||+.||++|||+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHTTCSCHHHHHHHHTSCBCSSCCTTT-TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhhHHHHHHHHhCcCCCCccHHH-hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence                            000000011110 011223345558889999999999999999854


No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=1e-39  Score=331.90  Aligned_cols=263  Identities=18%  Similarity=0.257  Sum_probs=201.0

Q ss_pred             hhhcCCCccccceEccCCcEEEEEEEEc-CC-cEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC------eeeEEEEEe
Q 009979          181 LEVSTNGFADENVIGEGGYGIVYHGVLE-DN-TNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN------LVRLLGYCA  252 (521)
Q Consensus       181 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn------iv~l~~~~~  252 (521)
                      .+...++|++.+.||+|+||.||+|... ++ ..||+|.+... ....+.+..|+++++.++|++      ++.+++++.
T Consensus        14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~   92 (355)
T 2eu9_A           14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN   92 (355)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred             CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence            3445679999999999999999999975 34 67999998643 344567888999999987665      999999999


Q ss_pred             eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEe----------
Q 009979          253 EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILL----------  322 (521)
Q Consensus       253 ~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl----------  322 (521)
                      .....++||||+ +++|.+++....  ...+++..++.++.|++.||+|||++   +|+||||||+|||+          
T Consensus        93 ~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~  166 (355)
T 2eu9_A           93 FHGHMCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYN  166 (355)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEEC
T ss_pred             eCCeEEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccc
Confidence            999999999999 567777776542  35789999999999999999999998   99999999999999          


Q ss_pred             ---------CCCCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 009979          323 ---------DKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYS  393 (521)
Q Consensus       323 ---------~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~  393 (521)
                               +.++.+||+|||+++.....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (355)
T 2eu9_A          167 EHKSCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH  242 (355)
T ss_dssp             CC-CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence                     56789999999999875332    23457999999999999999999999999999999999999999744


Q ss_pred             CCCCcccHHHHHHHHhhcc--------cc-ccCCCc---------------------ccCCCccHHHHHHHHHHHHhccC
Q 009979          394 RPPGEVNLVEWLKTMVTNR--------NA-EGVLDP---------------------RLQEKPCSRALKRALLVALRCVD  443 (521)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~--------~~-~~~~d~---------------------~l~~~~~~~~~~~~~~li~~cl~  443 (521)
                      ...   .....+.......        .. ......                     .............+.+++.+||+
T Consensus       243 ~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  319 (355)
T 2eu9_A          243 ENR---EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE  319 (355)
T ss_dssp             SHH---HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             CHH---HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence            321   1111111111000        00 000000                     00000112234456679999999


Q ss_pred             CCCCCCCCHHHHHH
Q 009979          444 PNAHKRPKMGHVIH  457 (521)
Q Consensus       444 ~dP~~RPt~~evl~  457 (521)
                      .||++|||+.|+++
T Consensus       320 ~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          320 FDPAQRITLAEALL  333 (355)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             CChhhCcCHHHHhc
Confidence            99999999999974


No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.2e-39  Score=326.67  Aligned_cols=253  Identities=24%  Similarity=0.365  Sum_probs=182.4

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh--hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeee
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ--AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRM  258 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~  258 (521)
                      ....++|++.+.||+|+||.||+|.+. +++.||||.+......  ..+.+..+..+++.++||||+++++++.+....+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            445568999999999999999999975 6889999999754322  2244555666788899999999999999999999


Q ss_pred             EEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          259 LVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHE-GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       259 lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~-~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      +||||+ ++.+..++...   ...+++..++.++.|++.||+|||+ .   +|+||||||+|||++.++.+||+|||++.
T Consensus       101 lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  173 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISG  173 (318)
T ss_dssp             EEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-
T ss_pred             EEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCch
Confidence            999999 55666665443   3578999999999999999999998 5   89999999999999999999999999998


Q ss_pred             ecCCCCcceeeccccccccccccccc-----CCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcc
Q 009979          338 LLGAERSYVTTRVMGTFGYVAPEYAS-----TGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNR  412 (521)
Q Consensus       338 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  412 (521)
                      ......  ......||+.|+|||++.     ...++.++|||||||++|||++|+.||....     ...+.+.......
T Consensus       174 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~  246 (318)
T 2dyl_A          174 RLVDDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----TDFEVLTKVLQEE  246 (318)
T ss_dssp             ---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHHSC
T ss_pred             hccCCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----ccHHHHHHHhccC
Confidence            654322  233457999999999984     5678899999999999999999999996432     1222233333221


Q ss_pred             ccccCCCcccCC-CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          413 NAEGVLDPRLQE-KPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       413 ~~~~~~d~~l~~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      .      +.+.. ...+..   +.+++.+||+.||.+||++.++++
T Consensus       247 ~------~~~~~~~~~~~~---l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 P------PLLPGHMGFSGD---FQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             C------CCCCSSSCCCHH---HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             C------CCCCccCCCCHH---HHHHHHHHccCChhHCcCHHHHhh
Confidence            1      11111 112333   445888999999999999999975


No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=3.6e-40  Score=345.38  Aligned_cols=252  Identities=27%  Similarity=0.357  Sum_probs=187.4

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .+...+|...+.||+|+||+||.....+++.||||++......   .+.+|+++|+.+ +||||+++++++.+....|||
T Consensus        20 ~i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           20 IVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            3455679999999999999976555567999999998654322   355799999999 799999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC-----CCCceEeeccc
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK-----QWNPKLSDFGL  335 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~-----~~~vkL~DFGl  335 (521)
                      ||||. |+|.+++....   ..+.+..++.++.|++.||+|||+.   +|+||||||+|||++.     ...+||+|||+
T Consensus        97 ~E~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~  169 (432)
T 3p23_A           97 IELCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL  169 (432)
T ss_dssp             EECCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred             EECCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence            99996 59999998763   2344445678999999999999999   9999999999999943     33578999999


Q ss_pred             ceecCCCCc--ceeeccccccccccccccc---CCCCCCcccchhHHHHHHHHHh-CCCCCCCCCCCCcccHHHHHHHHh
Q 009979          336 AKLLGAERS--YVTTRVMGTFGYVAPEYAS---TGMLNERSDVYSFGILIMEVIS-GRNPVDYSRPPGEVNLVEWLKTMV  409 (521)
Q Consensus       336 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwS~Gvvl~ellt-G~~Pf~~~~~~~~~~~~~~~~~~~  409 (521)
                      ++.......  .......||+.|+|||++.   ...++.++|||||||++|||+| |..||.....       .......
T Consensus       170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~-------~~~~~~~  242 (432)
T 3p23_A          170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ-------RQANILL  242 (432)
T ss_dssp             EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT-------HHHHHHT
T ss_pred             eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH-------HHHHHHh
Confidence            987653321  2234567999999999997   4567889999999999999999 9999953321       1111111


Q ss_pred             hccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          410 TNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       410 ~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ....    .+ ...  +.......+.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~~----~~-~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          243 GACS----LD-CLH--PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TCCC----CT-TSC--TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCC----cc-ccC--ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            1111    01 111  11222334556888999999999999999984


No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.5e-40  Score=331.15  Aligned_cols=244  Identities=28%  Similarity=0.419  Sum_probs=189.3

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCChh------hHHHHHHHHHHHhcC----CCCCeeeEEEE
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQ------AEKEFKVEVEAIGRV----RHKNLVRLLGY  250 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l----~hpniv~l~~~  250 (521)
                      +...++|++.+.||+|+||.||+|.+. +++.||+|.+......      ....+..|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            344568999999999999999999864 6889999998654322      223455688888888    89999999999


Q ss_pred             EeeCCeeeEEEEe-ccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeC-CCCCc
Q 009979          251 CAEGAHRMLVYEY-IDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLD-KQWNP  328 (521)
Q Consensus       251 ~~~~~~~~lV~e~-~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~-~~~~v  328 (521)
                      +...+..++|||| +.+++|.+++...    ..+++..++.++.|++.||+|||+.   +|+||||||+|||++ .++.+
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~  179 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA  179 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence            9999999999999 7899999999865    4689999999999999999999999   999999999999999 88999


Q ss_pred             eEeecccceecCCCCcceeecccccccccccccccCCCCC-CcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHH
Q 009979          329 KLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLN-ERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKT  407 (521)
Q Consensus       329 kL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~  407 (521)
                      ||+|||+++......   .....||+.|+|||++.+..+. .++|||||||++|||++|+.||....        +.   
T Consensus       180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~---  245 (312)
T 2iwi_A          180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EI---  245 (312)
T ss_dssp             EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HH---
T ss_pred             EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------HH---
Confidence            999999998765432   3345799999999998776664 58999999999999999999995321        11   


Q ss_pred             HhhccccccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          408 MVTNRNAEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       408 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                       ... .      ..+.. ..+.   .+.+++.+||+.||++||++.+++++
T Consensus       246 -~~~-~------~~~~~-~~~~---~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 -LEA-E------LHFPA-HVSP---DCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             -HHT-C------CCCCT-TSCH---HHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -hhh-c------cCCcc-cCCH---HHHHHHHHHccCChhhCcCHHHHhcC
Confidence             110 0      01111 1223   34458889999999999999999864


No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4.8e-39  Score=355.82  Aligned_cols=241  Identities=21%  Similarity=0.352  Sum_probs=193.6

Q ss_pred             hhcCCCccccceEccCCcEEEEEEEEc--CCcEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCe--
Q 009979          182 EVSTNGFADENVIGEGGYGIVYHGVLE--DNTNVAVKNLLNNR-GQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAH--  256 (521)
Q Consensus       182 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~--  256 (521)
                      ++..++|++.+.||+|+||.||+|.+.  +++.||||++.... ......+..|+++++.++||||+++++++.....  
T Consensus        76 ~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~  155 (681)
T 2pzi_A           76 DIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG  155 (681)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred             CEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence            445679999999999999999999975  57899999886543 3445678899999999999999999999987665  


Q ss_pred             ---eeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeec
Q 009979          257 ---RMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDF  333 (521)
Q Consensus       257 ---~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DF  333 (521)
                         .||||||++|++|.+++..      .+++..++.++.|++.||.|||++   +|+||||||+|||++.+ .+||+||
T Consensus       156 ~~~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DF  225 (681)
T 2pzi_A          156 DPVGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDL  225 (681)
T ss_dssp             CEEEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCC
T ss_pred             CceeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEec
Confidence               6999999999999987643      689999999999999999999999   99999999999999985 8999999


Q ss_pred             ccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccc
Q 009979          334 GLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRN  413 (521)
Q Consensus       334 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  413 (521)
                      |+++.....     ....||+.|+|||++.+.. +.++|||||||++|+|++|..||......                 
T Consensus       226 G~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------  282 (681)
T 2pzi_A          226 GAVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------  282 (681)
T ss_dssp             TTCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------
T ss_pred             ccchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------
Confidence            999876433     3457999999999987654 88999999999999999999888532110                 


Q ss_pred             cccCCCcccCCCccHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHhhc
Q 009979          414 AEGVLDPRLQEKPCSRALKRALLVALRCVDPNAHKRPK-MGHVIHMLEA  461 (521)
Q Consensus       414 ~~~~~d~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt-~~evl~~L~~  461 (521)
                        .+.    ...+.......+.+++.+||+.||++||+ +.++.+.|..
T Consensus       283 --~~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          283 --GLP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             --SCC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             --ccc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence              000    11112222345566888999999999995 5666665553


No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=3.2e-38  Score=312.68  Aligned_cols=232  Identities=13%  Similarity=0.106  Sum_probs=181.5

Q ss_pred             cCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeE
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRML  259 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~l  259 (521)
                      ..++|++.+.||+|+||.||+|.+. +++.||||.+.....   ...+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  108 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV  108 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence            4468999999999999999999976 488999999975432   334778899999999999999999999999999999


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||++|++|.++++..      .....+..++.|++.||+|||++   +|+||||||+|||++.++.+||+++|     
T Consensus       109 v~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-----  174 (286)
T 3uqc_A          109 VAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-----  174 (286)
T ss_dssp             EEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred             EEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----
Confidence            99999999999999542      34557888999999999999999   99999999999999999999998543     


Q ss_pred             CCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCC
Q 009979          340 GAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLD  419 (521)
Q Consensus       340 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  419 (521)
                                      |++|       ++.++|||||||++|||+||+.||............       ..........
T Consensus       175 ----------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~  224 (286)
T 3uqc_A          175 ----------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------ERDTAGQPIE  224 (286)
T ss_dssp             ----------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------CBCTTSCBCC
T ss_pred             ----------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------HHHhccCCCC
Confidence                            3333       688999999999999999999999865432211000       0000000000


Q ss_pred             cccCCCccHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhccC
Q 009979          420 PRLQEKPCSRALKRALLVALRCVDPNAHKRPKMGHVIHMLEAEE  463 (521)
Q Consensus       420 ~~l~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~L~~~~  463 (521)
                      +.......+.   .+.+++.+||+.||++| |+.|+++.|+...
T Consensus       225 ~~~~~~~~~~---~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          225 PADIDRDIPF---QISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HHHHCTTSCH---HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             hhhcccCCCH---HHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            0000011233   34558889999999999 9999999998643


No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.8e-39  Score=352.31  Aligned_cols=259  Identities=23%  Similarity=0.344  Sum_probs=196.2

Q ss_pred             CCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCeeeEEEEEee------CCee
Q 009979          186 NGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNN-RGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAE------GAHR  257 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~~~------~~~~  257 (521)
                      ++|++.+.||+|+||.||+|.+. ++..||||++... .....+.+..|+++++.++||||+++++++..      +...
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            58999999999999999999964 5889999988654 33445778999999999999999999999765      6678


Q ss_pred             eEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCC---ceEeecc
Q 009979          258 MLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWN---PKLSDFG  334 (521)
Q Consensus       258 ~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~---vkL~DFG  334 (521)
                      ++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.   +|+||||||+|||++.++.   +||+|||
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            99999999999999998753 234688899999999999999999998   9999999999999987665   8999999


Q ss_pred             cceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHH------
Q 009979          335 LAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTM------  408 (521)
Q Consensus       335 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~------  408 (521)
                      ++.......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||....     ....|....      
T Consensus       170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-----~~~~~~~~i~~~~~~  242 (676)
T 3qa8_A          170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-----QPVQWHGKVREKSNE  242 (676)
T ss_dssp             CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-----HHHHSSTTCC-----
T ss_pred             ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-----chhhhhhhhhcccch
Confidence            998764432  2345679999999999999999999999999999999999999996432     111111000      


Q ss_pred             --hhccccccC--CCccc--CCCccHHHHHHHHHHHHhccCCCCCCCCCHHHH
Q 009979          409 --VTNRNAEGV--LDPRL--QEKPCSRALKRALLVALRCVDPNAHKRPKMGHV  455 (521)
Q Consensus       409 --~~~~~~~~~--~d~~l--~~~~~~~~~~~~~~li~~cl~~dP~~RPt~~ev  455 (521)
                        .........  ....+  ...........+.+++.+||+.||++|||+.++
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence              000000000  00000  111123344556678889999999999999764


No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=5.4e-39  Score=334.75  Aligned_cols=244  Identities=17%  Similarity=0.195  Sum_probs=181.3

Q ss_pred             hcCCCccccceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh---hhHHHHHHHHHHHhcCCC-CCe-------------
Q 009979          183 VSTNGFADENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG---QAEKEFKVEVEAIGRVRH-KNL-------------  244 (521)
Q Consensus       183 ~~~~~~~~~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h-pni-------------  244 (521)
                      .....|...+.||+|+||+||+|.+. +++.||||++.....   ...+.+.+|+.+++.++| +|.             
T Consensus        75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred             CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence            34456888999999999999999965 688999999874322   235779999999999987 221             


Q ss_pred             --------eeEEEEEee-----CCeeeEEEEeccCCchHHhhhcC---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 009979          245 --------VRLLGYCAE-----GAHRMLVYEYIDNGNLEQWLHGD---VGPHSPLTWEIRMNIILGTAKGLTYLHEGLEP  308 (521)
Q Consensus       245 --------v~l~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~---~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~  308 (521)
                              ..+..++..     ....+++|+++ +++|.+++...   ......+++..++.++.|++.||+|||++   
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---  230 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---  230 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence                    111111221     12356777776 67999988421   11245678889999999999999999999   


Q ss_pred             CeeecCCCCCCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccc----------cCCCCCCcccchhHHH
Q 009979          309 KVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYA----------STGMLNERSDVYSFGI  378 (521)
Q Consensus       309 ~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwS~Gv  378 (521)
                      +|+||||||+||||+.++.+||+|||+++.....    ....+| +.|+|||++          .+..++.++|||||||
T Consensus       231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv  305 (413)
T 3dzo_A          231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL  305 (413)
T ss_dssp             TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred             CcccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence            9999999999999999999999999999875432    445678 999999998          5666889999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhccccccCCCcccCC-CccHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 009979          379 LIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEGVLDPRLQE-KPCSRALKRALLVALRCVDPNAHKRPKMGHVIH  457 (521)
Q Consensus       379 vl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~-~~~~~~~~~~~~li~~cl~~dP~~RPt~~evl~  457 (521)
                      ++|||+||+.||.........                   +..+.. ...+   ..+.+++.+||+.||++||++.++++
T Consensus       306 il~elltg~~Pf~~~~~~~~~-------------------~~~~~~~~~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          306 AIYWIWCADLPNTDDAALGGS-------------------EWIFRSCKNIP---QPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHSSCCCCTTGGGSCS-------------------GGGGSSCCCCC---HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHCCCCCCCcchhhhH-------------------HHHHhhcccCC---HHHHHHHHHHccCChhhCcCHHHHHh
Confidence            999999999999754322111                   111110 1123   34555888999999999999888754


No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=8.4e-38  Score=311.26  Aligned_cols=228  Identities=19%  Similarity=0.265  Sum_probs=176.0

Q ss_pred             Ccccc-ceEccCCcEEEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHH-hcCCCCCeeeEEEEEee----CCeeeE
Q 009979          187 GFADE-NVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAI-GRVRHKNLVRLLGYCAE----GAHRML  259 (521)
Q Consensus       187 ~~~~~-~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l-~~l~hpniv~l~~~~~~----~~~~~l  259 (521)
                      +|.+. +.||+|+||.||+|.+. +++.||+|.+...     ..+.+|++++ +.++||||+++++++..    ....++
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l   92 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI   92 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence            56666 78999999999999974 6889999998542     4566788887 66699999999999876    677899


Q ss_pred             EEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCC---CCCceEeecccc
Q 009979          260 VYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDK---QWNPKLSDFGLA  336 (521)
Q Consensus       260 V~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~---~~~vkL~DFGla  336 (521)
                      ||||+++|+|.+++....  ...+++..++.++.|++.||+|||+.   +|+||||||+|||++.   ++.+||+|||++
T Consensus        93 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A           93 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             EECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            999999999999998752  35799999999999999999999999   9999999999999987   788999999999


Q ss_pred             eecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCCCCCCCCcccHHHHHHHHhhcccccc
Q 009979          337 KLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVDYSRPPGEVNLVEWLKTMVTNRNAEG  416 (521)
Q Consensus       337 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (521)
                      ....                       +..++.++|||||||++|||++|+.||........           .......
T Consensus       168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~  213 (299)
T 3m2w_A          168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTR  213 (299)
T ss_dssp             EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCS
T ss_pred             cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHH
Confidence            7542                       23467889999999999999999999964432110           0000001


Q ss_pred             CCCcccCCCc--cHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 009979          417 VLDPRLQEKP--CSRALKRALLVALRCVDPNAHKRPKMGHVIHM  458 (521)
Q Consensus       417 ~~d~~l~~~~--~~~~~~~~~~li~~cl~~dP~~RPt~~evl~~  458 (521)
                      +.........  .......+.+++.+||+.||++|||+.|++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h  257 (299)
T 3m2w_A          214 IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  257 (299)
T ss_dssp             SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            1111111100  01123345568889999999999999999853


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=5.1e-39  Score=325.44  Aligned_cols=242  Identities=15%  Similarity=0.167  Sum_probs=185.1

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCCh--------hhHHHHHHHHHHHhcCC---------CCCeee
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG--------QAEKEFKVEVEAIGRVR---------HKNLVR  246 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~---------hpniv~  246 (521)
                      ..++|++.+.||+|+||+||+|++ +++.||||++.....        ...+.+.+|+.+++.++         ||||++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            345789999999999999999998 689999999975432        22377888999998885         888888


Q ss_pred             EEEEEe------------------------------eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHH
Q 009979          247 LLGYCA------------------------------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTA  296 (521)
Q Consensus       247 l~~~~~------------------------------~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia  296 (521)
                      +.+++.                              +....||||||+++|++.+.+.+     ..+++..++.++.|++
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT  171 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence            877643                              26788999999999977666643     3579999999999999


Q ss_pred             HHHHHHH-hcCCCCeeecCCCCCCeEeCCCC--------------------CceEeecccceecCCCCcceeeccccccc
Q 009979          297 KGLTYLH-EGLEPKVVHRDIKSSNILLDKQW--------------------NPKLSDFGLAKLLGAERSYVTTRVMGTFG  355 (521)
Q Consensus       297 ~al~~LH-~~~~~~iiHrDik~~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~  355 (521)
                      .||+||| +.   +|+||||||+|||++.++                    .+||+|||+++.....      ...||+.
T Consensus       172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~  242 (336)
T 2vuw_A          172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV  242 (336)
T ss_dssp             HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred             HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence            9999999 88   999999999999999887                    8999999999876432      3479999


Q ss_pred             ccccccccCCCCCCcccchhHHHH-HHHHHhCCCCCCCCCCCCcccHHHHH-HHHhhccccccCCCcccCCCccHHHHHH
Q 009979          356 YVAPEYASTGMLNERSDVYSFGIL-IMEVISGRNPVDYSRPPGEVNLVEWL-KTMVTNRNAEGVLDPRLQEKPCSRALKR  433 (521)
Q Consensus       356 y~aPE~~~~~~~~~~sDvwS~Gvv-l~elltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~  433 (521)
                      |+|||++.+.. +.++||||||++ .+++++|..||..      ......+ ........    ...............+
T Consensus       243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~s~~  311 (336)
T 2vuw_A          243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN------VLWLHYLTDKMLKQMT----FKTKCNTPAMKQIKRK  311 (336)
T ss_dssp             TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH------HHHHHHHHHHHHHTCC----CSSCCCSHHHHHHHHH
T ss_pred             ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc------hhhhhHHHHhhhhhhc----cCcccchhhhhhcCHH
Confidence            99999998766 889999998777 7788889999831      0000111 11111111    1111111123345567


Q ss_pred             HHHHHHhccCCCCCCCCCHHHHH
Q 009979          434 ALLVALRCVDPNAHKRPKMGHVI  456 (521)
Q Consensus       434 ~~~li~~cl~~dP~~RPt~~evl  456 (521)
                      +.+|+.+||+.|     |+.|++
T Consensus       312 ~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          312 IQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHhccC-----CHHHHH
Confidence            778999999976     999987


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97  E-value=2.5e-32  Score=294.86  Aligned_cols=185  Identities=14%  Similarity=0.073  Sum_probs=131.8

Q ss_pred             eEccCCcEEEEEEE-EcCCcEEEEEEeccCC----------hhhHHHHHHHHHHHhcC-CCCCeeeEEEEEeeCCeeeEE
Q 009979          193 VIGEGGYGIVYHGV-LEDNTNVAVKNLLNNR----------GQAEKEFKVEVEAIGRV-RHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       193 ~LG~G~fG~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~Ei~~l~~l-~hpniv~l~~~~~~~~~~~lV  260 (521)
                      .++.|++|.+..++ +-.|+.||||.+.+..          ....++|.+|+++|+++ .|+||++++++++++...|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            46677777777655 3358889999986542          12336799999999999 699999999999999999999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||++|++|.++|...    .+++..   .|+.||+.||+|||++   |||||||||+||||+++|++||+|||+|+...
T Consensus       321 MEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~  390 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP  390 (569)
T ss_dssp             EECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred             EecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence            9999999999999865    456654   5889999999999999   99999999999999999999999999998764


Q ss_pred             CCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCC
Q 009979          341 AERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNP  389 (521)
Q Consensus       341 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~P  389 (521)
                      ... ...+..+||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus       391 ~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          391 QDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             CCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            432 23455789999999999865 467789999999998887665544


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95  E-value=7.1e-29  Score=266.38  Aligned_cols=185  Identities=17%  Similarity=0.227  Sum_probs=146.9

Q ss_pred             cccceEccCCcEEEEEEEEcCCcEEEEEEeccCChh--------hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCCeeeEE
Q 009979          189 ADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQ--------AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~~~~lV  260 (521)
                      ...+.||+|+||.||+|.+ .+..+++|+.......        ..+.+.+|+++|++++||||+++..++......|||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            4467899999999999955 5788999987543211        134578999999999999999666666677778999


Q ss_pred             EEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecC
Q 009979          261 YEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLG  340 (521)
Q Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~  340 (521)
                      |||+++++|.+++..            +..++.|++.||+|||++   +|+||||||+|||++.  ++||+|||+++...
T Consensus       418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            999999999999865            458899999999999999   9999999999999999  99999999999875


Q ss_pred             CCCcce------eecccccccccccccccC--CCCCCcccchhHHHHHHHHHhCCCCCC
Q 009979          341 AERSYV------TTRVMGTFGYVAPEYAST--GMLNERSDVYSFGILIMEVISGRNPVD  391 (521)
Q Consensus       341 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwS~Gvvl~elltG~~Pf~  391 (521)
                      ......      .....||+.|||||++..  ..|+..+|+|+..+-..+-+.++-+|.
T Consensus       481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence            432221      235789999999999976  668889999999998888888877763


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.91  E-value=7e-25  Score=216.21  Aligned_cols=152  Identities=18%  Similarity=0.101  Sum_probs=121.2

Q ss_pred             hhhhcCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCCh------------------hhHHHHHHHHHHHhcCCC
Q 009979          180 ELEVSTNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRG------------------QAEKEFKVEVEAIGRVRH  241 (521)
Q Consensus       180 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l~h  241 (521)
                      .+......|.+.+.||+|+||.||+|.+.+++.||+|.+.....                  .....+.+|+++|+.++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            33444556778899999999999999997789999999864321                  13456889999999999 


Q ss_pred             CCeeeEEEEEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeE
Q 009979          242 KNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNIL  321 (521)
Q Consensus       242 pniv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NIL  321 (521)
                       | +++.+++.. +..++||||++||+|.+ +..          .....++.|++.||.|||+.   +|+||||||+|||
T Consensus       163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL  225 (282)
T 1zar_A          163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL  225 (282)
T ss_dssp             -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred             -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence             4 555555443 55699999999999998 421          12346899999999999998   9999999999999


Q ss_pred             eCCCCCceEeecccceecCCCCcceeecccccccccccccccC
Q 009979          322 LDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYAST  364 (521)
Q Consensus       322 l~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  364 (521)
                      ++ ++.+||+|||+++.              +..|+|||++..
T Consensus       226 l~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r  253 (282)
T 1zar_A          226 VS-EEGIWIIDFPQSVE--------------VGEEGWREILER  253 (282)
T ss_dssp             EE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred             EE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence            99 99999999999973              445789998743


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.83  E-value=1.4e-20  Score=182.96  Aligned_cols=137  Identities=21%  Similarity=0.168  Sum_probs=107.0

Q ss_pred             CccccceEccCCcEEEEEEEE-cCCcE--EEEEEeccCChh------------------------hHHHHHHHHHHHhcC
Q 009979          187 GFADENVIGEGGYGIVYHGVL-EDNTN--VAVKNLLNNRGQ------------------------AEKEFKVEVEAIGRV  239 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~Ei~~l~~l  239 (521)
                      -|.+.+.||+|+||.||+|.+ .+|+.  ||||++......                        ....+..|+.+|..+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            467889999999999999997 67888  999987543111                        123678899999999


Q ss_pred             CCCCe--eeEEEEEeeCCeeeEEEEeccC-C----chHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCee
Q 009979          240 RHKNL--VRLLGYCAEGAHRMLVYEYIDN-G----NLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLH-EGLEPKVV  311 (521)
Q Consensus       240 ~hpni--v~l~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH-~~~~~~ii  311 (521)
                      .|+++  ..++++    ...+|||||+.+ |    +|.++...       .++..+..++.|++.||.||| +.   +|+
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---giv  193 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELV  193 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence            88754  444443    346899999942 4    67766432       123456789999999999999 88   999


Q ss_pred             ecCCCCCCeEeCCCCCceEeecccceec
Q 009979          312 HRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       312 HrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ||||||+|||+++  .++|+|||+|...
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             eCCCCHHHEEEcC--cEEEEECcccccC
Confidence            9999999999998  9999999999864


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69  E-value=4.7e-17  Score=165.25  Aligned_cols=139  Identities=13%  Similarity=0.085  Sum_probs=101.9

Q ss_pred             cCCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChh--------------hH--------HHHHHHHHHHhcCCC
Q 009979          184 STNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQ--------------AE--------KEFKVEVEAIGRVRH  241 (521)
Q Consensus       184 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~--------------~~--------~~~~~Ei~~l~~l~h  241 (521)
                      ...-|.+.+.||.|+||.||+|...+|+.||||++......              ..        -....|...|.++.+
T Consensus        93 rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~  172 (397)
T 4gyi_A           93 RKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE  172 (397)
T ss_dssp             TTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh
Confidence            33458999999999999999999888999999987432100              00        112346677777754


Q ss_pred             CCee--eEEEEEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCC
Q 009979          242 KNLV--RLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSN  319 (521)
Q Consensus       242 pniv--~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~N  319 (521)
                      .++.  ..+++  .  ..+|||||++|++|.++...          .....++.|++.+|.|||+.   +||||||||.|
T Consensus       173 ~gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N  235 (397)
T 4gyi_A          173 EGFPVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFN  235 (397)
T ss_dssp             TTCSCCCEEEE--E--TTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred             cCCCCCeeeec--c--CceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence            4432  23322  2  23799999999888765421          12356788999999999998   99999999999


Q ss_pred             eEeCCCCC----------ceEeecccceec
Q 009979          320 ILLDKQWN----------PKLSDFGLAKLL  339 (521)
Q Consensus       320 ILl~~~~~----------vkL~DFGla~~~  339 (521)
                      ||+++++.          +.|+||+-+...
T Consensus       236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          236 ILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             EEEeCCCCcccccccccceEEEEeCCcccC
Confidence            99987763          889999977653


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.40  E-value=9.6e-13  Score=127.43  Aligned_cols=143  Identities=16%  Similarity=0.082  Sum_probs=112.3

Q ss_pred             CCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCCeeeEEEEec
Q 009979          186 NGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       186 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~  264 (521)
                      ..|++...++.|+++.||++... +..+++|............+..|+++++.+. +..+.++++++.+.+..|+||||+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i   92 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA   92 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred             ccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence            36778888999999999999754 6889999886432223346888999999884 677889999999888999999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL--------------------------------------  306 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~--------------------------------------  306 (521)
                      +|.+|.+.+...         .....++.+++.+|..||+..                                      
T Consensus        93 ~G~~l~~~~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (263)
T 3tm0_A           93 DGVLCSEEYEDE---------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP  163 (263)
T ss_dssp             SSEEHHHHCCTT---------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred             CCeehhhccCCc---------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence            999998763211         123467789999999999810                                      


Q ss_pred             ------------------CCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          307 ------------------EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       307 ------------------~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                                        .+.++|+|+++.|||++++..+.|+||+.+..
T Consensus       164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                              13599999999999998765667999998764


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.30  E-value=6.6e-12  Score=120.87  Aligned_cols=137  Identities=17%  Similarity=0.135  Sum_probs=100.1

Q ss_pred             CccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC--eeeEEEEEeeCCeeeEEEEec
Q 009979          187 GFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN--LVRLLGYCAEGAHRMLVYEYI  264 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn--iv~l~~~~~~~~~~~lV~e~~  264 (521)
                      .+.+....+.|..+.||++...+|..+++|.....   ....+..|+.+++.+.+.+  +.++++++..++..++||||+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            34433333455569999998766788999987543   2345778999998886444  566888888877889999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL--------------------------------------  306 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~--------------------------------------  306 (521)
                      +|.+|.  ...       ..   ...++.+++..|..||+..                                      
T Consensus        98 ~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           98 PGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             SSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             CCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            998884  211       11   1256677888888888641                                      


Q ss_pred             -----------------CCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          307 -----------------EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       307 -----------------~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                                       ...++|+|++|.|||+++++.+.|+|||.+..
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                             11299999999999998776677999998864


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12  E-value=1.5e-10  Score=117.46  Aligned_cols=142  Identities=11%  Similarity=0.164  Sum_probs=107.1

Q ss_pred             ccceEccCCcEEEEEEEEcCCcEEEEEEec--cCC-hhhHHHHHHHHHHHhcCC--CCCeeeEEEEEeeC---CeeeEEE
Q 009979          190 DENVIGEGGYGIVYHGVLEDNTNVAVKNLL--NNR-GQAEKEFKVEVEAIGRVR--HKNLVRLLGYCAEG---AHRMLVY  261 (521)
Q Consensus       190 ~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~Ei~~l~~l~--hpniv~l~~~~~~~---~~~~lV~  261 (521)
                      ..+.|+.|.++.||+.... +..+++|+..  ... ......+..|+.+++.+.  +..+.+++.++.+.   +..|+||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            4567899999999999875 4678888765  322 122356788999999987  45688999998776   3478999


Q ss_pred             EeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 009979          262 EYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-----------------------------------  306 (521)
Q Consensus       262 e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-----------------------------------  306 (521)
                      ||++|..+.+..      ...++...+..++.+++..|+.||+..                                   
T Consensus       121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            999997775421      234677888899999999999999731                                   


Q ss_pred             --------------------CCCeeecCCCCCCeEeCCCCC--ceEeeccccee
Q 009979          307 --------------------EPKVVHRDIKSSNILLDKQWN--PKLSDFGLAKL  338 (521)
Q Consensus       307 --------------------~~~iiHrDik~~NILl~~~~~--vkL~DFGla~~  338 (521)
                                          .+.++|+|+++.|||++.++.  +.|+||+.+..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                247999999999999987653  68999999975


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.08  E-value=6.7e-11  Score=117.15  Aligned_cols=183  Identities=19%  Similarity=0.188  Sum_probs=122.6

Q ss_pred             cceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCC--eeeEEEEEeeCC---eeeEEEEec
Q 009979          191 ENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKN--LVRLLGYCAEGA---HRMLVYEYI  264 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpn--iv~l~~~~~~~~---~~~lV~e~~  264 (521)
                      .+.++.|.+..||+..    ..+++|....  ......+..|+++|+.+. +..  +.+++.+.....   ..|+||+++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999863    5688997542  234567889999998873 322  445655544333   348999999


Q ss_pred             cCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q 009979          265 DNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG---------------------------------------  305 (521)
Q Consensus       265 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~---------------------------------------  305 (521)
                      +|.+|.+...      ..++...+..++.+++..|+.||+.                                       
T Consensus        99 ~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           99 KGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             CCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            9988875432      2356777788888888888888861                                       


Q ss_pred             ----------------CCCCeeecCCCCCCeEeCC--CCCceEeecccceecCCCCcceeecccccccc---cccccccC
Q 009979          306 ----------------LEPKVVHRDIKSSNILLDK--QWNPKLSDFGLAKLLGAERSYVTTRVMGTFGY---VAPEYAST  364 (521)
Q Consensus       306 ----------------~~~~iiHrDik~~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y---~aPE~~~~  364 (521)
                                      ..+.++|+|+++.||++++  ...+.|+||+.+..-......     .....+   ..|+....
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~  247 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDF-----ISLMEDDEEYGMEFVSK  247 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHH-----HTTCCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHH-----HHHHhhccccCHHHHHH
Confidence                            0245899999999999988  556789999998764221110     001111   12221100


Q ss_pred             -----CCC---------CCcccchhHHHHHHHHHhCCCCC
Q 009979          365 -----GML---------NERSDVYSFGILIMEVISGRNPV  390 (521)
Q Consensus       365 -----~~~---------~~~sDvwS~Gvvl~elltG~~Pf  390 (521)
                           +..         ....+.|+++.++|.+.+|..+|
T Consensus       248 ~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          248 ILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                 000         11258999999999999998775


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.78  E-value=4e-08  Score=97.86  Aligned_cols=137  Identities=17%  Similarity=0.151  Sum_probs=101.1

Q ss_pred             CccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC----CCeeeEEEEEeeCCeeeEEEE
Q 009979          187 GFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH----KNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       187 ~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h----pniv~l~~~~~~~~~~~lV~e  262 (521)
                      .+...+.++.|....||+.    +..+++|....  ......+..|.++|+.+.+    ..+.+++++    +..++|||
T Consensus        38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme  107 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK  107 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred             ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence            4455678999999999998    66788887632  2334568889999888865    234555555    45689999


Q ss_pred             eccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 009979          263 YIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL------------------------------------  306 (521)
Q Consensus       263 ~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~------------------------------------  306 (521)
                      |++|.++.....      ..++......++.+++..|..||+..                                    
T Consensus       108 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (320)
T 3r70_A          108 YIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL  181 (320)
T ss_dssp             CCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence            999988864321      23566667778888888888888532                                    


Q ss_pred             ------------------------CCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          307 ------------------------EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       307 ------------------------~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                                              .+.++|+|+++.|||++++..+.|+||+.+..-
T Consensus       182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~  238 (320)
T 3r70_A          182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG  238 (320)
T ss_dssp             CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence                                    123599999999999998666799999999754


No 261
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.62  E-value=3.6e-07  Score=90.37  Aligned_cols=137  Identities=17%  Similarity=0.160  Sum_probs=96.5

Q ss_pred             cceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC---CeeeEEEEEe-eCCeeeEEEEeccC
Q 009979          191 ENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHK---NLVRLLGYCA-EGAHRMLVYEYIDN  266 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hp---niv~l~~~~~-~~~~~~lV~e~~~~  266 (521)
                      .+.++.|....||+.    +..+++|+-  ........+..|+++|+.+.+.   .+.+++.++. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~--~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFP--KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEE--SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEec--CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            456888999999988    567888874  2334456788999999998642   3567777764 44567899999999


Q ss_pred             CchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 009979          267 GNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEG-----------------------------------------  305 (521)
Q Consensus       267 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~-----------------------------------------  305 (521)
                      ..|.+...      ..++......++.+++..|..||+.                                         
T Consensus        98 ~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (306)
T 3tdw_A           98 QILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY  171 (306)
T ss_dssp             EECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred             eECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence            88876321      1234445555555555555555542                                         


Q ss_pred             ----------------CCCCeeecCCCCCCeEeCC---CCCc-eEeecccceec
Q 009979          306 ----------------LEPKVVHRDIKSSNILLDK---QWNP-KLSDFGLAKLL  339 (521)
Q Consensus       306 ----------------~~~~iiHrDik~~NILl~~---~~~v-kL~DFGla~~~  339 (521)
                                      ..+.++|+|+++.|||++.   ++.+ .|+||+.+..-
T Consensus       172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                            1235799999999999987   4554 89999988753


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.60  E-value=2.1e-07  Score=91.23  Aligned_cols=77  Identities=21%  Similarity=0.260  Sum_probs=61.3

Q ss_pred             cccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC---CeeeEEEEEeeCCeeeEEEEecc
Q 009979          189 ADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHK---NLVRLLGYCAEGAHRMLVYEYID  265 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hp---niv~l~~~~~~~~~~~lV~e~~~  265 (521)
                      ...+.|+.|.++.||++...+|..+++|+...........|..|++.|+.+.+.   .+.+++++.    ..++||||++
T Consensus        18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~   93 (288)
T 3d1u_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred             cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence            446789999999999999888999999986543333346789999999999765   578888764    3589999999


Q ss_pred             CCch
Q 009979          266 NGNL  269 (521)
Q Consensus       266 ~g~L  269 (521)
                      |+++
T Consensus        94 g~~~   97 (288)
T 3d1u_A           94 ERPP   97 (288)
T ss_dssp             CCCC
T ss_pred             cCCC
Confidence            8764


No 263
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52  E-value=7.7e-07  Score=85.92  Aligned_cols=135  Identities=17%  Similarity=0.106  Sum_probs=97.7

Q ss_pred             eEccCCcE-EEEEEEEc-CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCCeeeEEEEeccCCch
Q 009979          193 VIGEGGYG-IVYHGVLE-DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYEYIDNGNL  269 (521)
Q Consensus       193 ~LG~G~fG-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~~~~lV~e~~~~g~L  269 (521)
                      .+..|..| .||+.... ++..+++|.-..   ....++..|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            44556555 69987754 466788887543   24567888999998874 33477889999998999999999999888


Q ss_pred             HHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 009979          270 EQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGL-------------------------------------------  306 (521)
Q Consensus       270 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~-------------------------------------------  306 (521)
                      .+.....        ......+..+++..|..||...                                           
T Consensus       108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (272)
T 4gkh_A          108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV  179 (272)
T ss_dssp             HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred             cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence            7765332        1123345666777777777321                                           


Q ss_pred             ------------CCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          307 ------------EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       307 ------------~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                                  .+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus       180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                        12389999999999999877777999998864


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.40  E-value=1.2e-06  Score=88.80  Aligned_cols=146  Identities=12%  Similarity=0.088  Sum_probs=91.4

Q ss_pred             ccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC--eeeEEEEEeeC-CeeeEEEEec
Q 009979          188 FADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN--LVRLLGYCAEG-AHRMLVYEYI  264 (521)
Q Consensus       188 ~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn--iv~l~~~~~~~-~~~~lV~e~~  264 (521)
                      ....+.|+.|....+|+... ++..+++|.....     ..+..|+.+++.+....  +.+++.++... ...|+||||+
T Consensus        43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l  116 (362)
T 3ovc_A           43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA  116 (362)
T ss_dssp             CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred             CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence            34467789999999999886 5788999976432     25788889998886433  56777777654 5679999999


Q ss_pred             cCCchHHh------------------hhcCCCCC-C-------C-----CCHHHH---------------------HHHH
Q 009979          265 DNGNLEQW------------------LHGDVGPH-S-------P-----LTWEIR---------------------MNII  292 (521)
Q Consensus       265 ~~g~L~~~------------------l~~~~~~~-~-------~-----l~~~~~---------------------~~i~  292 (521)
                      +|.++.+.                  ||...... .       .     -.|...                     ....
T Consensus       117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~  196 (362)
T 3ovc_A          117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA  196 (362)
T ss_dssp             CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence            98665421                  12110000 0       0     001100                     0111


Q ss_pred             HHHHHHHHHHHhc-CCCCeeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          293 LGTAKGLTYLHEG-LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       293 ~~ia~al~~LH~~-~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ..+...++++... ..+.++|+|+.+.|||+++++.+.|+||+.+..-
T Consensus       197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g  244 (362)
T 3ovc_A          197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG  244 (362)
T ss_dssp             HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence            1111222233211 0246899999999999988777889999998763


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.39  E-value=4.4e-07  Score=91.51  Aligned_cols=80  Identities=10%  Similarity=0.027  Sum_probs=55.4

Q ss_pred             cceE-ccCCcEEEEEEEEc-------CCcEEEEEEeccCC---hhhHHHHHHHHHHHhcCC-C--CCeeeEEEEEeeC--
Q 009979          191 ENVI-GEGGYGIVYHGVLE-------DNTNVAVKNLLNNR---GQAEKEFKVEVEAIGRVR-H--KNLVRLLGYCAEG--  254 (521)
Q Consensus       191 ~~~L-G~G~fG~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-h--pniv~l~~~~~~~--  254 (521)
                      .+.| +.|....+|+....       ++..+++|......   ......+..|+.+++.+. +  -.+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4667 88989999998754       25678888754322   101245677888888774 2  3577888887665  


Q ss_pred             -CeeeEEEEeccCCchH
Q 009979          255 -AHRMLVYEYIDNGNLE  270 (521)
Q Consensus       255 -~~~~lV~e~~~~g~L~  270 (521)
                       ...++||||++|..+.
T Consensus       105 ~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TSSCEEEEECCCCBCCC
T ss_pred             cCCceEEEEecCCCChh
Confidence             3468999999986654


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.11  E-value=1.4e-05  Score=79.53  Aligned_cols=143  Identities=18%  Similarity=0.228  Sum_probs=80.3

Q ss_pred             cceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-----CCCeeeEE-E--EEeeCCeeeEEEE
Q 009979          191 ENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-----HKNLVRLL-G--YCAEGAHRMLVYE  262 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----hpniv~l~-~--~~~~~~~~~lV~e  262 (521)
                      .+.|+.|..+.||+....++ .+++|.....    ...+..|+.+++.+.     .|.++... |  +....+..++||+
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            34566677889999987544 5899988652    233344555555442     34444311 1  1234567789999


Q ss_pred             eccCCchH--------------HhhhcCCC-C--C-------CCCCHHHH------------------------------
Q 009979          263 YIDNGNLE--------------QWLHGDVG-P--H-------SPLTWEIR------------------------------  288 (521)
Q Consensus       263 ~~~~g~L~--------------~~l~~~~~-~--~-------~~l~~~~~------------------------------  288 (521)
                      |++|..+.              ..+|.... .  .       ....|...                              
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99986432              11222100 0  0       01122211                              


Q ss_pred             -HHHHHHHHHHHHHHHh----------cCCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          289 -MNIILGTAKGLTYLHE----------GLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       289 -~~i~~~ia~al~~LH~----------~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                       ..+...+..++++|++          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             0111123345666663          0234899999999999998888999999998764


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.10  E-value=1.2e-05  Score=82.31  Aligned_cols=75  Identities=16%  Similarity=0.175  Sum_probs=49.3

Q ss_pred             cceEccCCcEEEEEEEEc-CCcEEEEEEeccCCh-------hhHHHHHHHHHHHhcCCC--C-CeeeEEEEEeeCCeeeE
Q 009979          191 ENVIGEGGYGIVYHGVLE-DNTNVAVKNLLNNRG-------QAEKEFKVEVEAIGRVRH--K-NLVRLLGYCAEGAHRML  259 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~h--p-niv~l~~~~~~~~~~~l  259 (521)
                      .+.||.|.++.||++... ++..+++|.......       .....+..|.++|+.+..  + .+.+++.+  +....++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            567999999999999743 467899997643211       123456778888887732  3 34456654  3445689


Q ss_pred             EEEeccCC
Q 009979          260 VYEYIDNG  267 (521)
Q Consensus       260 V~e~~~~g  267 (521)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999764


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.06  E-value=2.2e-05  Score=76.58  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=58.9

Q ss_pred             CCCccccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC---CCeeeEEEEEeeCCeeeEEE
Q 009979          185 TNGFADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH---KNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       185 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h---pniv~l~~~~~~~~~~~lV~  261 (521)
                      .....-.+.+|.|..+.||+....+|+.|++|+...........|..|+..|+.+.-   --+.+++++.    ..++||
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~   89 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM   89 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred             CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEE
Confidence            345556788999999999999999999999998655444444568889998887742   2345566543    237999


Q ss_pred             EeccCCc
Q 009979          262 EYIDNGN  268 (521)
Q Consensus       262 e~~~~g~  268 (521)
                      ||++++.
T Consensus        90 e~l~~~~   96 (288)
T 3f7w_A           90 EWVDERP   96 (288)
T ss_dssp             ECCCCCC
T ss_pred             EeecccC
Confidence            9998754


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.93  E-value=2.1e-05  Score=81.09  Aligned_cols=78  Identities=9%  Similarity=0.106  Sum_probs=49.0

Q ss_pred             CCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCcceeecccc--cccccccccccCCC---CCCcccchhHHHHHH
Q 009979          307 EPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMG--TFGYVAPEYASTGM---LNERSDVYSFGILIM  381 (521)
Q Consensus       307 ~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~---~~~~sDvwS~Gvvl~  381 (521)
                      .+.++|+|+++.|||++.++ ++|+||+.+..-......  ....+  ...|++|+......   -....++......+|
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl--a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI--GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW  307 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH--HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH--HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence            34899999999999998776 999999999864221111  11111  24567776653211   111244557777788


Q ss_pred             HHHhCC
Q 009979          382 EVISGR  387 (521)
Q Consensus       382 elltG~  387 (521)
                      +.+++.
T Consensus       308 ~~y~~~  313 (420)
T 2pyw_A          308 NLFNKR  313 (420)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            877653


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.92  E-value=5.4e-05  Score=74.76  Aligned_cols=141  Identities=14%  Similarity=0.119  Sum_probs=92.9

Q ss_pred             cccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCeeeEEEEEeeCCeeeEEEEecc
Q 009979          189 ADENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR---HKNLVRLLGYCAEGAHRMLVYEYID  265 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---hpniv~l~~~~~~~~~~~lV~e~~~  265 (521)
                      ...+.|+.|.+..+|+... ++..+++|.....   ....+..|++.|+.+.   ...+.+++.++...+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3456799999999999876 4678899976432   3567888999888874   3568889988887788999999999


Q ss_pred             CCchH-----------HhhhcCCC-C-C----------------CCCCHHHHH---HHH----------------HHHHH
Q 009979          266 NGNLE-----------QWLHGDVG-P-H----------------SPLTWEIRM---NII----------------LGTAK  297 (521)
Q Consensus       266 ~g~L~-----------~~l~~~~~-~-~----------------~~l~~~~~~---~i~----------------~~ia~  297 (521)
                      +..+.           ..||.... . .                -.-+|....   ++.                ..++.
T Consensus       115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~  194 (312)
T 3jr1_A          115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ  194 (312)
T ss_dssp             CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence            87541           12333211 0 0                011343221   111                11111


Q ss_pred             H-HHHHHh-cCCCCeeecCCCCCCeEeCCCCCceEeecc
Q 009979          298 G-LTYLHE-GLEPKVVHRDIKSSNILLDKQWNPKLSDFG  334 (521)
Q Consensus       298 a-l~~LH~-~~~~~iiHrDik~~NILl~~~~~vkL~DFG  334 (521)
                      . ...|.. ...+.++|+|+.+.|++++.++ +.|+||.
T Consensus       195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            1 223321 2356899999999999999887 8899984


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.56  E-value=0.00021  Score=70.02  Aligned_cols=140  Identities=14%  Similarity=0.091  Sum_probs=75.6

Q ss_pred             cceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCe-eeEEEEEeeCCeeeEEEEec-cCCc
Q 009979          191 ENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNL-VRLLGYCAEGAHRMLVYEYI-DNGN  268 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpni-v~l~~~~~~~~~~~lV~e~~-~~g~  268 (521)
                      .+.|+.|....+|+.     ..+++|........ ......|+.+++.+...++ .++++++  ...-++|+||+ +|.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence            678999999999998     56888877543211 1123457777766642222 4566554  33347999999 6644


Q ss_pred             hHH------------------hhhcCCCC-CCCCCH-HHHHHHHH--------------HHHHHH----HHHHh-cCCCC
Q 009979          269 LEQ------------------WLHGDVGP-HSPLTW-EIRMNIIL--------------GTAKGL----TYLHE-GLEPK  309 (521)
Q Consensus       269 L~~------------------~l~~~~~~-~~~l~~-~~~~~i~~--------------~ia~al----~~LH~-~~~~~  309 (521)
                      |..                  .+|..... ...... .....+..              .+...+    +.|.. .....
T Consensus        95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~  174 (301)
T 3dxq_A           95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA  174 (301)
T ss_dssp             CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred             CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence            421                  11221100 000111 11111100              011111    11111 12345


Q ss_pred             eeecCCCCCCeEeCCCCCceEeecccceec
Q 009979          310 VVHRDIKSSNILLDKQWNPKLSDFGLAKLL  339 (521)
Q Consensus       310 iiHrDik~~NILl~~~~~vkL~DFGla~~~  339 (521)
                      ++|+|+.+.||+ ..++.+.|+||..+..-
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            899999999999 55667899999988753


No 272
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.51  E-value=0.00033  Score=72.36  Aligned_cols=73  Identities=18%  Similarity=0.218  Sum_probs=49.8

Q ss_pred             cceEccCCcEEEEEEEEcC--------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC-eeeEEEEEeeCCeeeEEE
Q 009979          191 ENVIGEGGYGIVYHGVLED--------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN-LVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn-iv~l~~~~~~~~~~~lV~  261 (521)
                      .+.|+.|....||++...+        +..+++|+....  .....+..|+.+++.+...+ ..++++.+.+    .+||
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4578888899999998753        467889987432  11244557888888875333 3567776643    3899


Q ss_pred             EeccCCch
Q 009979          262 EYIDNGNL  269 (521)
Q Consensus       262 e~~~~g~L  269 (521)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986443


No 273
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.46  E-value=0.0007  Score=67.11  Aligned_cols=143  Identities=14%  Similarity=0.089  Sum_probs=73.0

Q ss_pred             ceEccCCcEE-EEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCC--CCeeeEEEEEeeCCeeeEEEEeccCCc
Q 009979          192 NVIGEGGYGI-VYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRH--KNLVRLLGYCAEGAHRMLVYEYIDNGN  268 (521)
Q Consensus       192 ~~LG~G~fG~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h--pniv~l~~~~~~~~~~~lV~e~~~~g~  268 (521)
                      +.|+.|+... +|+....++..+++|.......   ..+..|+.+++.+..  -.+.+++.+..+.+  ++|||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            4566565554 6677654466777775433221   234446666665532  23556776644333  78999997766


Q ss_pred             hHHhhhcC---------------------CCC-CCCCCHHHHH-------H-H------------HHHHHHHHHHHHh--
Q 009979          269 LEQWLHGD---------------------VGP-HSPLTWEIRM-------N-I------------ILGTAKGLTYLHE--  304 (521)
Q Consensus       269 L~~~l~~~---------------------~~~-~~~l~~~~~~-------~-i------------~~~ia~al~~LH~--  304 (521)
                      +.+++...                     ... ...+......       . +            ...+...++.|.+  
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            65443211                     000 1112211100       0 0            0011112222211  


Q ss_pred             -cCCCCeeecCCCCCCeEeCCC----CCceEeecccceec
Q 009979          305 -GLEPKVVHRDIKSSNILLDKQ----WNPKLSDFGLAKLL  339 (521)
Q Consensus       305 -~~~~~iiHrDik~~NILl~~~----~~vkL~DFGla~~~  339 (521)
                       .....++|+|+.+.|||++.+    +.+.|+||+.+..-
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence             123479999999999999874    67899999998753


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.44  E-value=0.00062  Score=67.03  Aligned_cols=145  Identities=14%  Similarity=0.132  Sum_probs=79.9

Q ss_pred             cceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC--eeeEEEE------EeeCCeeeEEEE
Q 009979          191 ENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN--LVRLLGY------CAEGAHRMLVYE  262 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn--iv~l~~~------~~~~~~~~lV~e  262 (521)
                      .+.|+.|....+|+....++ .+++|.....  .....+..|+.+++.+...+  +.+++..      ....+..+++|+
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~  103 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS  103 (322)
T ss_dssp             EEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             eeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence            45678888899999987655 6889987542  12234556777776663211  2233311      122356789999


Q ss_pred             eccCCchHH--------------hhhcCC-CCCCC----CC---HHHHHH------------HHHHHHHHHHHHHhc---
Q 009979          263 YIDNGNLEQ--------------WLHGDV-GPHSP----LT---WEIRMN------------IILGTAKGLTYLHEG---  305 (521)
Q Consensus       263 ~~~~g~L~~--------------~l~~~~-~~~~~----l~---~~~~~~------------i~~~ia~al~~LH~~---  305 (521)
                      |++|..+..              .+|... ....+    ..   |.....            +...+...+++++..   
T Consensus       104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~  183 (322)
T 2ppq_A          104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  183 (322)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence            998854311              122211 00000    11   221100            001134455566532   


Q ss_pred             -CCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          306 -LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       306 -~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                       ....++|+|+.+.|||++++..+.|+||+.+..
T Consensus       184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             134799999999999998876568999998864


No 275
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.35  E-value=0.0011  Score=68.88  Aligned_cols=74  Identities=12%  Similarity=0.071  Sum_probs=47.8

Q ss_pred             cceEccCCcEEEEEEEEcC-CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCe-eeEEEEEeeCCeeeEEEEeccCCc
Q 009979          191 ENVIGEGGYGIVYHGVLED-NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNL-VRLLGYCAEGAHRMLVYEYIDNGN  268 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpni-v~l~~~~~~~~~~~lV~e~~~~g~  268 (521)
                      .+.|+.|-...+|++...+ +..+++|+....... .-+...|+.+++.+...++ .++++++.+    .+||||++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence            4578888899999998864 467888876432211 1112568888888864444 567777632    36999998754


Q ss_pred             h
Q 009979          269 L  269 (521)
Q Consensus       269 L  269 (521)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 276
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.31  E-value=0.0014  Score=64.62  Aligned_cols=143  Identities=15%  Similarity=0.138  Sum_probs=80.8

Q ss_pred             ceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCC--CeeeEEEE-----EeeCCeeeEEEEec
Q 009979          192 NVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHK--NLVRLLGY-----CAEGAHRMLVYEYI  264 (521)
Q Consensus       192 ~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hp--niv~l~~~-----~~~~~~~~lV~e~~  264 (521)
                      ..|+ |....||+....+|+.+++|...... .....+..|..+++.+...  .+++++..     ....+..++||+|+
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4566 78889999877667789999875332 1335566788877776421  23344332     12244567899999


Q ss_pred             cCCchH-----Hh---------hhcCC---C--CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 009979          265 DNGNLE-----QW---------LHGDV---G--PHSPLTWEIR----MNI---------------ILGTAKGLTYLHEG-  305 (521)
Q Consensus       265 ~~g~L~-----~~---------l~~~~---~--~~~~l~~~~~----~~i---------------~~~ia~al~~LH~~-  305 (521)
                      +|..+.     .+         +|...   .  .....++...    ..+               ...+...++.+... 
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            875432     10         12110   0  0111222110    001               00111223333321 


Q ss_pred             ---CCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          306 ---LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       306 ---~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                         ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               234689999999999999 4 899999998764


No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.31  E-value=0.00074  Score=68.42  Aligned_cols=142  Identities=17%  Similarity=0.131  Sum_probs=82.2

Q ss_pred             ceEccCCcEEEEEEEEc--------CCcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCCeeeEEEE
Q 009979          192 NVIGEGGYGIVYHGVLE--------DNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVYE  262 (521)
Q Consensus       192 ~~LG~G~fG~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~~~~lV~e  262 (521)
                      +.|..|-...+|++...        ++..+++|+.-. .......+.+|.++++.+. +.-..++++++.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            46777888899998864        246788887532 1223455668999888774 3223667777654    39999


Q ss_pred             eccCCchHH-----------------hhhcCCC-CCCCCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 009979          263 YIDNGNLEQ-----------------WLHGDVG-PHSPLT--WEIRMNIILGTA-------------------KGLTYLH  303 (521)
Q Consensus       263 ~~~~g~L~~-----------------~l~~~~~-~~~~l~--~~~~~~i~~~ia-------------------~al~~LH  303 (521)
                      |++|..|..                 .||.... ......  +..+.++..++.                   ..+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            999855431                 1122211 111222  344444443321                   1223332


Q ss_pred             ----hc-CCCCeeecCCCCCCeEeCCC----CCceEeeccccee
Q 009979          304 ----EG-LEPKVVHRDIKSSNILLDKQ----WNPKLSDFGLAKL  338 (521)
Q Consensus       304 ----~~-~~~~iiHrDik~~NILl~~~----~~vkL~DFGla~~  338 (521)
                          .. ....++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence                21 13469999999999999876    7899999998864


No 278
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.13  E-value=0.00096  Score=67.24  Aligned_cols=74  Identities=15%  Similarity=0.056  Sum_probs=43.8

Q ss_pred             cceEccCCcEEEEEEEEcC---------CcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC-eeeEEEEEeeCCeeeEE
Q 009979          191 ENVIGEGGYGIVYHGVLED---------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKN-LVRLLGYCAEGAHRMLV  260 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpn-iv~l~~~~~~~~~~~lV  260 (521)
                      .+.|+.|....+|+....+         +..+++|+...... .......|.++++.+...+ ..++++..  .  -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence            3567788888999998753         26788887643221 1112356888887774333 44666554  2  2789


Q ss_pred             EEeccCCch
Q 009979          261 YEYIDNGNL  269 (521)
Q Consensus       261 ~e~~~~g~L  269 (521)
                      |||++|..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999987543


No 279
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=96.93  E-value=0.00092  Score=44.40  Aligned_cols=33  Identities=12%  Similarity=0.169  Sum_probs=15.5

Q ss_pred             hhHHHHHHHHH-HHHHHHHHHHHHhhhccccccc
Q 009979           21 RLWVVLGICVG-AGIVLVLFLISLWFTSKRNSNN   53 (521)
Q Consensus        21 ~~~~~i~i~~g-~~~v~~l~~l~~~~~~rr~~~~   53 (521)
                      +.-.+++.++| ++++++++++.+|++|||++++
T Consensus         8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~   41 (44)
T 2l2t_A            8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK   41 (44)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            33344544454 5555444444445555444433


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.92  E-value=0.0061  Score=60.63  Aligned_cols=31  Identities=23%  Similarity=0.327  Sum_probs=28.0

Q ss_pred             CCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          308 PKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       308 ~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      ..++|+|+.+.||++++++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4799999999999999888899999988775


No 281
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.92  E-value=0.005  Score=56.62  Aligned_cols=102  Identities=18%  Similarity=0.095  Sum_probs=66.8

Q ss_pred             CchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccceecCCCCcce
Q 009979          267 GNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKLLGAERSYV  346 (521)
Q Consensus       267 g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~~~~~~~~~  346 (521)
                      -+|.+.|...   ..+++++++|.++.|.+.+|.-+-...  .-..+=+.+..|++..+|+|-+.+ +.+.         
T Consensus        33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------   97 (229)
T 2yle_A           33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------   97 (229)
T ss_dssp             EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred             ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc---------
Confidence            4899999876   579999999999999999987762111  111333456899999999887764 1111         


Q ss_pred             eecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCC
Q 009979          347 TTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRN  388 (521)
Q Consensus       347 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~  388 (521)
                          .....+.|||... ...+++.=|||+|+++|..+-=..
T Consensus        98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL  134 (229)
T 2yle_A           98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL  134 (229)
T ss_dssp             -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred             ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence                1133467888763 345678889999999999886333


No 282
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=96.80  E-value=0.0012  Score=43.77  Aligned_cols=28  Identities=25%  Similarity=0.297  Sum_probs=14.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009979           22 LWVVLGICVGAGIVLVLFLISLWFTSKR   49 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l~~~~~~rr   49 (521)
                      .-.++++++|+++++++.++.+++.|||
T Consensus        11 ~~~Ia~~vVGvll~vi~~l~~~~~~RRR   38 (44)
T 2jwa_A           11 LTSIISAVVGILLVVVLGVVFGILIKRR   38 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhheehh
Confidence            4456788888654444433333333333


No 283
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=96.76  E-value=0.00093  Score=44.49  Aligned_cols=28  Identities=21%  Similarity=0.173  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009979           25 VLGICVGAGIVLVLFLISLWFTSKRNSN   52 (521)
Q Consensus        25 ~i~i~~g~~~v~~l~~l~~~~~~rr~~~   52 (521)
                      ..|++.|++++++++++.+|++|||+++
T Consensus        14 A~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           14 ATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             EeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            3455555655555545555555555443


No 284
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.63  E-value=0.01  Score=60.38  Aligned_cols=143  Identities=17%  Similarity=0.153  Sum_probs=82.0

Q ss_pred             ceEccCCcEEEEEEEEcC--------CcEEEEEEeccCChh------------------hHHHHHHHHHHHhcCC-CCCe
Q 009979          192 NVIGEGGYGIVYHGVLED--------NTNVAVKNLLNNRGQ------------------AEKEFKVEVEAIGRVR-HKNL  244 (521)
Q Consensus       192 ~~LG~G~fG~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~Ei~~l~~l~-hpni  244 (521)
                      +.|..|--..+|++...+        ...|.+++.-.....                  ..+.+..|..+++.+. +.-.
T Consensus        58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~  137 (401)
T 3f2s_A           58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG  137 (401)
T ss_dssp             EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred             EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence            456667888999988653        367888876432211                  0112335888888774 4445


Q ss_pred             eeEEEEEeeCCeeeEEEEeccCCchHH--h---------------hhcCCC-CCCCCC--HHHHHHHHHHHH--------
Q 009979          245 VRLLGYCAEGAHRMLVYEYIDNGNLEQ--W---------------LHGDVG-PHSPLT--WEIRMNIILGTA--------  296 (521)
Q Consensus       245 v~l~~~~~~~~~~~lV~e~~~~g~L~~--~---------------l~~~~~-~~~~l~--~~~~~~i~~~ia--------  296 (521)
                      .++++++.+    .+|+||++|-+|..  +               +|.... ......  +....++..++.        
T Consensus       138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~  213 (401)
T 3f2s_A          138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES  213 (401)
T ss_dssp             CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred             CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence            677777654    28999998754421  1               122211 111122  223333332221        


Q ss_pred             --------------HHH----HHHHhc-CCCCeeecCCCCCCeEeCCC------CCceEeeccccee
Q 009979          297 --------------KGL----TYLHEG-LEPKVVHRDIKSSNILLDKQ------WNPKLSDFGLAKL  338 (521)
Q Consensus       297 --------------~al----~~LH~~-~~~~iiHrDik~~NILl~~~------~~vkL~DFGla~~  338 (521)
                                    .-+    .+|... ....++|+|+.+.|||++++      +.+.|+||..+..
T Consensus       214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~  280 (401)
T 3f2s_A          214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence                          112    223221 23368999999999999876      7899999988864


No 285
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=96.26  E-value=0.005  Score=39.68  Aligned_cols=30  Identities=17%  Similarity=0.186  Sum_probs=20.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHH-HHhhhcc
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLI-SLWFTSK   48 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l-~~~~~~r   48 (521)
                      |+.-..+.||++|+++.++|+.. ++|++||
T Consensus         7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~rr   37 (38)
T 2k1k_A            7 GLTGGEIVAVIFGLLLGAALLLGILVFRSRR   37 (38)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence            67778889999998765554444 4444444


No 286
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.96  E-value=0.021  Score=58.46  Aligned_cols=142  Identities=15%  Similarity=0.134  Sum_probs=83.0

Q ss_pred             cceEccCCcEEEEEEEEcC--------CcEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCeeeEEEEEeeCCeeeEEE
Q 009979          191 ENVIGEGGYGIVYHGVLED--------NTNVAVKNLLNNRGQAEKEFKVEVEAIGRVR-HKNLVRLLGYCAEGAHRMLVY  261 (521)
Q Consensus       191 ~~~LG~G~fG~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-hpniv~l~~~~~~~~~~~lV~  261 (521)
                      .+.|..|-...+|+....+        +..+++++.-... ...-+..+|..+++.+. +.-..++++.+.    -++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence            4567778888999998753        5778888764322 11122356777777774 222455665442    27899


Q ss_pred             EeccCCchHH--------------h---hhcCC------C---CCCCCCHHHHHHHHHHH-------------------H
Q 009979          262 EYIDNGNLEQ--------------W---LHGDV------G---PHSPLTWEIRMNIILGT-------------------A  296 (521)
Q Consensus       262 e~~~~g~L~~--------------~---l~~~~------~---~~~~l~~~~~~~i~~~i-------------------a  296 (521)
                      ||++|..|..              .   ||...      .   ...+..+..+..+..++                   .
T Consensus       150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~  229 (424)
T 3mes_A          150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL  229 (424)
T ss_dssp             ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred             EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence            9999865421              0   11110      0   11122233333333221                   1


Q ss_pred             HHHHHHHhc---------------------CCCCeeecCCCCCCeEeCCCCCceEeeccccee
Q 009979          297 KGLTYLHEG---------------------LEPKVVHRDIKSSNILLDKQWNPKLSDFGLAKL  338 (521)
Q Consensus       297 ~al~~LH~~---------------------~~~~iiHrDik~~NILl~~~~~vkL~DFGla~~  338 (521)
                      ..+..|.+.                     ....++|+|+.+.||+ +.++.+.|+||..+..
T Consensus       230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            223333211                     1236899999999999 8888999999998875


No 287
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=95.50  E-value=0.017  Score=35.84  Aligned_cols=31  Identities=26%  Similarity=0.439  Sum_probs=25.9

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009979           18 FGLRLWVVLGICVGAGIVLVLFLISLWFTSK   48 (521)
Q Consensus        18 ~g~~~~~~i~i~~g~~~v~~l~~l~~~~~~r   48 (521)
                      .+++...+.||++|.++..+++.+.+|+++|
T Consensus         2 ~~L~~gaIaGIVvgdi~~t~~i~~~vy~~~r   32 (33)
T 2l34_A            2 STVSPGVLAGIVVGDLVLTVLIALAVYFLGR   32 (33)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cccCcceEEeEeHHHHHHHHHHHHHHhheec
Confidence            3678889999999999888888888888765


No 288
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=95.30  E-value=0.015  Score=38.35  Aligned_cols=27  Identities=30%  Similarity=0.508  Sum_probs=13.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009979           22 LWVVLGICVGAGIVLVLFLISLWFTSK   48 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l~~~~~~r   48 (521)
                      .++++++++|+++++++++++++++||
T Consensus        13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rR   39 (41)
T 2k9y_A           13 LAVIGGVAVGVVLLLVLAGVGFFIHRR   39 (41)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred             EEEEeehhHHHHHHHHHHHHheeEeee
Confidence            445566666665543243444444433


No 289
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=94.52  E-value=0.048  Score=37.68  Aligned_cols=26  Identities=31%  Similarity=0.778  Sum_probs=19.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLW   44 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~   44 (521)
                      +..+|++++.++|.+++++|+.+++|
T Consensus         6 ~vp~WiIi~svl~GLLLL~Lii~~Lw   31 (54)
T 2l8s_A            6 RVPLWVILLSAFAGLLLLMLLILALW   31 (54)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899998888887777666666555


No 290
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=94.11  E-value=0.069  Score=37.07  Aligned_cols=26  Identities=23%  Similarity=0.731  Sum_probs=19.5

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLW   44 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~   44 (521)
                      +..+|++++.++|.++++.|+.+++|
T Consensus         9 ~vp~wiIi~svl~GLllL~li~~~Lw   34 (54)
T 2knc_A            9 AIPIWWVLVGVLGGLLLLTILVLAMW   34 (54)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899998888887777666665555


No 291
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.09  E-value=0.36  Score=48.87  Aligned_cols=30  Identities=30%  Similarity=0.424  Sum_probs=25.5

Q ss_pred             CeeecCCCCCCeEe------CCCCCceEeeccccee
Q 009979          309 KVVHRDIKSSNILL------DKQWNPKLSDFGLAKL  338 (521)
Q Consensus       309 ~iiHrDik~~NILl------~~~~~vkL~DFGla~~  338 (521)
                      .++|+|+.+.|||+      +++..++++||-+|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567799999998875


No 292
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=93.24  E-value=0.13  Score=33.73  Aligned_cols=26  Identities=23%  Similarity=0.731  Sum_probs=19.7

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLW   44 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~   44 (521)
                      +..+|++++.++|.++++.++.+++|
T Consensus         7 ~vp~wiIi~s~l~GLllL~li~~~Lw   32 (42)
T 2k1a_A            7 AIPIWWVLVGVLGGLLLLTILVLAMW   32 (42)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899998888887777666666655


No 293
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=90.63  E-value=0.1  Score=32.63  Aligned_cols=26  Identities=19%  Similarity=0.415  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccc
Q 009979           24 VVLGICVGAGIVLVLFLISLWFTSKR   49 (521)
Q Consensus        24 ~~i~i~~g~~~v~~l~~l~~~~~~rr   49 (521)
                      .++..++|+++++++.+.+.++.|||
T Consensus         9 sIaagVvglll~vii~l~~~~~iRRr   34 (35)
T 1iij_A            9 FIIATVVGVLLFLILVVVVGILIKRR   34 (35)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred             EeHHHHHHHHHHHHHHHHhheEEeec
Confidence            34555556444433333333333333


No 294
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=89.49  E-value=0.41  Score=34.22  Aligned_cols=6  Identities=0%  Similarity=0.346  Sum_probs=2.5

Q ss_pred             HHHHHh
Q 009979           39 FLISLW   44 (521)
Q Consensus        39 ~~l~~~   44 (521)
                      +++++|
T Consensus        24 ~glcI~   29 (70)
T 2klu_A           24 IGLGIF   29 (70)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            344444


No 295
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=88.57  E-value=0.35  Score=36.63  Aligned_cols=27  Identities=30%  Similarity=0.443  Sum_probs=16.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLWF   45 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~~   45 (521)
                      ..++|.+++.++|++++++|++|++|.
T Consensus         7 ~~n~~~Iv~gvi~gilliGllllliwk   33 (79)
T 2knc_B            7 GPDILVVLLSVMGAILLIGLAALLIWK   33 (79)
T ss_dssp             SSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence            456777776666666666665555554


No 296
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=87.94  E-value=0.098  Score=58.72  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=0.0

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009979           17 IFGLRLWVVLGICVGAGIVLVLFLISLWFTSKR   49 (521)
Q Consensus        17 ~~g~~~~~~i~i~~g~~~v~~l~~l~~~~~~rr   49 (521)
                      -.||.+|.+|+|++|++++++++++++++++||
T Consensus       699 ~~~l~~~aii~il~~~~~ll~~~ll~~~~~~~~  731 (880)
T 1q55_A          699 VGGFDLPIILVILGSVLALLILFLLLLLFLKRK  731 (880)
T ss_dssp             ---------------------------------
T ss_pred             ccCccHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            468999999999999988777766666665444


No 297
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=87.91  E-value=0.62  Score=30.77  Aligned_cols=27  Identities=30%  Similarity=0.443  Sum_probs=17.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLWF   45 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~~   45 (521)
                      +.+.+.+++.++|++++++++++.+|-
T Consensus         6 ~~n~~~Iv~gvi~~ivliGl~lLliwk   32 (43)
T 2k9j_B            6 GPDILVVLLSVMGAILLIGLAALLIWK   32 (43)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEeehHHHHHHHHHHHHHHHHHHHH
Confidence            347777776666666666666666554


No 298
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.67  E-value=1.2  Score=40.68  Aligned_cols=116  Identities=11%  Similarity=0.153  Sum_probs=79.2

Q ss_pred             CCCCCeeeEEEEEeeCCeeeEEEEeccCC-chHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 009979          239 VRHKNLVRLLGYCAEGAHRMLVYEYIDNG-NLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKS  317 (521)
Q Consensus       239 l~hpniv~l~~~~~~~~~~~lV~e~~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~iiHrDik~  317 (521)
                      ..||+++.. .+-.+++.+.+.++.-+.+ ++.. +       ..++...+++++.+++....+++..     +|--|.|
T Consensus        42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-------k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P  107 (215)
T 4ann_A           42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-------KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAP  107 (215)
T ss_dssp             SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-------GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSG
T ss_pred             ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-------HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEec
Confidence            368988876 5666667766767654432 2332 3       3467788999999999888666643     7888999


Q ss_pred             CCeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCcccchhHHHHHHHHHhCCCCCC
Q 009979          318 SNILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVISGRNPVD  391 (521)
Q Consensus       318 ~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwS~Gvvl~elltG~~Pf~  391 (521)
                      +||+++.++.+++.-.|+-..                  ++|.-     +++..=+-.+=|++..+++++..|+
T Consensus       108 ~NL~f~~~~~p~i~~RGik~~------------------l~P~~-----~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          108 DELFFTRDGLPIAKTRGLQNV------------------VDPLP-----VSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             GGEEECTTSCEEESCCEETTT------------------BSCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             ceEEEcCCCCEEEEEccCccC------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            999999999999987665432                  22221     1111113356788899999998884


No 299
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=85.57  E-value=2  Score=39.37  Aligned_cols=114  Identities=8%  Similarity=0.048  Sum_probs=76.5

Q ss_pred             CCCCeeeEEEEEeeCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeeecCCCCC
Q 009979          240 RHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLT-YLHEGLEPKVVHRDIKSS  318 (521)
Q Consensus       240 ~hpniv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~-~LH~~~~~~iiHrDik~~  318 (521)
                      .||++  -..+-.+++.+.+.++.-+++.-...++       .++...+++++.+++.... +++.     -+|--|.|+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~  113 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPE  113 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGG
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCc
Confidence            67888  3445567777777777654443333343       4577889999988887766 5553     477789999


Q ss_pred             CeEeCCCCCceEeecccceecCCCCcceeecccccccccccccccCCCCCCccc-chhHHHHHHHHHhCCCCCC
Q 009979          319 NILLDKQWNPKLSDFGLAKLLGAERSYVTTRVMGTFGYVAPEYASTGMLNERSD-VYSFGILIMEVISGRNPVD  391 (521)
Q Consensus       319 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sD-vwS~Gvvl~elltG~~Pf~  391 (521)
                      ||++|.++.+++.-.|+-..                  ++|.-+.      ..| +-.+=|++..++.++..|+
T Consensus       114 NL~f~~~~~p~i~hRGi~~~------------------lpP~e~~------ee~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          114 NLMFNRALEPFFLHVGVKES------------------LPPDEWD------DERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             GEEECTTCCEEESCCEETTT------------------BSSCSCC------HHHHHHHHHHHHHHHTTCSSCHH
T ss_pred             eEEEeCCCcEEEEEcCCccc------------------CCCCCCC------HHHHHHHHHHHHHHHHcCCCCHH
Confidence            99999999999987765432                  3332211      112 2346678888888887773


No 300
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=85.25  E-value=0.56  Score=33.51  Aligned_cols=34  Identities=21%  Similarity=0.226  Sum_probs=25.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHH-HHhhhcccccccch
Q 009979           22 LWVVLGICVGAGIVLVLFLI-SLWFTSKRNSNNSK   55 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l-~~~~~~rr~~~~~~   55 (521)
                      +.+++|-++|.++++++.++ ++-+++||++..+.
T Consensus        10 ~LivlGg~~~lll~~glcI~ccvkcrhRrrqAeRM   44 (70)
T 2klu_A           10 ALIVLGGVAGLLLFIGLGIFFSVRSRHRRRQAERM   44 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSCCSSSCTTS
T ss_pred             HHHHHhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            33788999999999999999 56566666655544


No 301
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.89  E-value=0.13  Score=53.30  Aligned_cols=61  Identities=5%  Similarity=-0.033  Sum_probs=18.4

Q ss_pred             cccceEccCCcEEEEEEEEcC-CcEEEE------EEeccCCh--hhHHHHHHHHHHHhcCCCCCeeeEEEEEe
Q 009979          189 ADENVIGEGGYGIVYHGVLED-NTNVAV------KNLLNNRG--QAEKEFKVEVEAIGRVRHKNLVRLLGYCA  252 (521)
Q Consensus       189 ~~~~~LG~G~fG~Vy~~~~~~-~~~vav------K~~~~~~~--~~~~~~~~Ei~~l~~l~hpniv~l~~~~~  252 (521)
                      .+.+.||   ||.||+|.+.. ..+||+      |.......  +....+..|..+++.++|||+++.+++..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            4456776   99999999754 467888      76544222  22346778999999999999999988754


No 302
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=80.46  E-value=1.6  Score=27.96  Aligned_cols=26  Identities=23%  Similarity=0.466  Sum_probs=19.8

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLW   44 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~   44 (521)
                      |--.-++||+++|++++++++++.+.
T Consensus        11 GaIAGiVvG~v~gv~li~~l~~~~~r   36 (38)
T 2k1k_A           11 GEIVAVIFGLLLGAALLLGILVFRSR   36 (38)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CceeeeehHHHHHHHHHHHHHHHHee
Confidence            44466889999998888888777765


No 303
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=80.43  E-value=2.2  Score=26.57  Aligned_cols=28  Identities=18%  Similarity=0.370  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhhccccc
Q 009979           24 VVLGICVGAGIV-LVLFLISLWFTSKRNS   51 (521)
Q Consensus        24 ~~i~i~~g~~~v-~~l~~l~~~~~~rr~~   51 (521)
                      ++-||++|.+-+ ++.+++..|+.+||-+
T Consensus         5 lL~GIVlGlipvtlaGLfv~Ay~QyrRg~   33 (37)
T 1q90_G            5 LLCGIVLGLVPVTIAGLFVTAYLQYLRGD   33 (37)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred             hhhhHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            567899998643 3333455888877753


No 304
>3arc_J Photosystem II reaction center protein J; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_J* 3a0b_J* 3a0h_J* 2axt_J* 3bz1_J* 3bz2_J* 3kzi_J* 3prq_J* 3prr_J*
Probab=76.16  E-value=3  Score=26.40  Aligned_cols=24  Identities=21%  Similarity=0.551  Sum_probs=13.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHh
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLW   44 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~   44 (521)
                      .++||+ |+-+.|. .|+.++++++|
T Consensus         7 RiPLWl-vgtv~G~-~vi~~~giFfy   30 (40)
T 3arc_J            7 RIPLWI-VATVAGM-GVIVIVGLFFY   30 (40)
T ss_dssp             SSCHHH-HHHHHHH-HHHHHHHHHHH
T ss_pred             cccEEe-eeeehhh-hhhheeeEEEe
Confidence            468998 5666664 33444455444


No 305
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=75.84  E-value=1.3  Score=33.44  Aligned_cols=30  Identities=17%  Similarity=0.123  Sum_probs=12.7

Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 009979           16 SIFGLRLWVVLGICVGAGIVLVLFLISLWF   45 (521)
Q Consensus        16 ~~~g~~~~~~i~i~~g~~~v~~l~~l~~~~   45 (521)
                      .+.+.=+-++.||++..++++++.-++..+
T Consensus         9 n~~~Iv~gvi~gilliGllllliwk~~~~i   38 (79)
T 2knc_B            9 DILVVLLSVMGAILLIGLAALLIWKLLITI   38 (79)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444445555544443433333333333


No 306
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=74.66  E-value=3.9  Score=27.02  Aligned_cols=30  Identities=7%  Similarity=-0.144  Sum_probs=18.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009979           22 LWVVLGICVGAGIVLVLFLISLWFTSKRNSN   52 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l~~~~~~rr~~~   52 (521)
                      .-++.|+++.+ ++++++++.+-.++++++|
T Consensus        15 ~gVVgGv~~~~-ii~~~~~~~~RRr~~~~kR   44 (44)
T 2ks1_B           15 TGMVGALLLLL-VVALGIGLFMRRRHIVRKR   44 (44)
T ss_dssp             HHHHHHHHHHH-HHHHHHHHHHHTTTCCSCC
T ss_pred             eehhHHHHHHH-HHHHHHHHHhhhhHhhccC
Confidence            34445555544 4446667778887766654


No 307
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=74.65  E-value=3.9  Score=26.96  Aligned_cols=29  Identities=21%  Similarity=0.159  Sum_probs=17.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 009979           23 WVVLGICVGAGIVLVLFLISLWFTSKRNSN   52 (521)
Q Consensus        23 ~~~i~i~~g~~~v~~l~~l~~~~~~rr~~~   52 (521)
                      -++.|+++. +++++++++.+-.++++++|
T Consensus        15 gVVgGv~~v-~ii~~~~~~~~RRRr~~~kr   43 (44)
T 2l2t_A           15 GVIGGLFIL-VIVGLTFAVYVRRKSIKKKR   43 (44)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHHHTTCSSCCC
T ss_pred             eehHHHHHH-HHHHHHHHHHhhhhhhhhcc
Confidence            344444444 45556667778887766655


No 308
>2l35_A DAP12-NKG2C_TM; immunoreceptor, transmembrane assembly, DAP12-NKG2C complex; NMR {Homo sapiens}
Probab=73.36  E-value=3.3  Score=29.31  Aligned_cols=31  Identities=26%  Similarity=0.445  Sum_probs=26.6

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLWFTSKR   49 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~~~~rr   49 (521)
                      -++.+.++||++|=+++-+++++.+|++.++
T Consensus         3 ELd~~tvaGIIv~DIi~TllLal~VY~~A~~   33 (63)
T 2l35_A            3 TVSPGVLAGIVVGDLVLTVLIALAVYFLGRL   33 (63)
T ss_dssp             SSCCSHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             eccchheehhHHHHHHHHHHHHHHHHhhccc
Confidence            3667889999999998888889999998766


No 309
>2llm_A Amyloid beta A4 protein; alzheimer'S disease, protein fibril; NMR {Homo sapiens} PDB: 2loh_A
Probab=74.42  E-value=0.79  Score=29.79  Aligned_cols=27  Identities=22%  Similarity=0.501  Sum_probs=13.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccc
Q 009979           23 WVVLGICVGAGIVLVLFLISLWFTSKR   49 (521)
Q Consensus        23 ~~~i~i~~g~~~v~~l~~l~~~~~~rr   49 (521)
                      -.+||+.++++.+..++++.+++.|||
T Consensus        17 ga~iGL~v~gVai~~vIVvsl~mlRrr   43 (43)
T 2llm_A           17 GAIIGLMVGGVVIATVIVITLVMLKKK   43 (43)
Confidence            344555555554444445555554443


No 310
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=69.81  E-value=2.5  Score=26.30  Aligned_cols=28  Identities=18%  Similarity=0.252  Sum_probs=14.4

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHhhhccccc
Q 009979           24 VVLGICVGAGIV-LVLFLISLWFTSKRNS   51 (521)
Q Consensus        24 ~~i~i~~g~~~v-~~l~~l~~~~~~rr~~   51 (521)
                      ++-||++|.+-+ ++.+++..|+.+||-+
T Consensus         5 lL~GIVlGlipvtl~GLfv~Ay~QyrRg~   33 (37)
T 1vf5_G            5 LLDGLVLGLVFATLGGLFYAAYQQYKRPN   33 (37)
T ss_dssp             ----CHHHHHHHHHHHHTHHHHHHTCC--
T ss_pred             hhhhHHHhhHHHHHHHHHHHHHHHHhhcc
Confidence            456888887643 3333456888887753


No 311
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=69.43  E-value=5.4  Score=24.31  Aligned_cols=24  Identities=25%  Similarity=0.246  Sum_probs=10.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhh
Q 009979           22 LWVVLGICVGAGIVLVLFLISLWF   45 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l~~~~   45 (521)
                      +.+-+||++-.++|.+++.+.+|.
T Consensus         5 L~lg~Gvl~LLviV~LgV~LI~f~   28 (35)
T 2lk9_A            5 LLLGIGILVLLIIVILGVPLIIFT   28 (35)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             eeecccHHHHHHHHHhcchheEEe
Confidence            334455554444444333333333


No 312
>2kv5_A FST, putative uncharacterized protein RNAI; toxin-antitoxin, bacterial, toxin; NMR {Enterococcus faecalis}
Probab=67.66  E-value=6.6  Score=23.91  Aligned_cols=24  Identities=25%  Similarity=0.281  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009979           23 WVVLGICVGAGIVLVLFLISLWFTSKRN   50 (521)
Q Consensus        23 ~~~i~i~~g~~~v~~l~~l~~~~~~rr~   50 (521)
                      -++.+|+||+++    .++.-|+-.|+.
T Consensus         7 ~IIaPivVGvvl----~L~d~WLn~r~~   30 (33)
T 2kv5_A            7 LVIAPIFVGLVL----EMISRVLDEEDD   30 (33)
T ss_dssp             HHHHHHHHHHHH----HHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHH----HHHHHHHccccc
Confidence            456677777633    356678865553


No 313
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=66.30  E-value=6.6  Score=24.05  Aligned_cols=22  Identities=9%  Similarity=0.259  Sum_probs=8.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhc
Q 009979           26 LGICVGAGIVLVLFLISLWFTS   47 (521)
Q Consensus        26 i~i~~g~~~v~~l~~l~~~~~~   47 (521)
                      +-.++|.++++++++-.+.+||
T Consensus        10 lt~i~gl~vif~~lg~tflywr   31 (40)
T 2l9u_A           10 LTVIAGLVVIFMMLGGTFLYWR   31 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCceeEEEc
Confidence            3444554444333333333343


No 314
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=64.79  E-value=7.8  Score=28.14  Aligned_cols=28  Identities=21%  Similarity=0.231  Sum_probs=13.2

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009979           17 IFGLRLWVVLGICVGAGIVLVLFLISLWFT   46 (521)
Q Consensus        17 ~~g~~~~~~i~i~~g~~~v~~l~~l~~~~~   46 (521)
                      -.|.-+.++|.|.++|  +-+|++.|||+.
T Consensus        11 ttgvvtv~viliavaa--lg~li~gcwcyl   38 (90)
T 1zza_A           11 TTGVVTVIVILIAIAA--LGALILGCWCYL   38 (90)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHHHHHHTTT
T ss_pred             CcceEEehhHHHHHHH--HHHHHHHHHHHH
Confidence            3455444444444444  334445555554


No 315
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=59.53  E-value=81  Score=33.33  Aligned_cols=46  Identities=28%  Similarity=0.239  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          285 WEIRMNIILGTA--KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       285 ~~~~~~i~~~ia--~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      +..+..++..+|  ..+.|+=     ||  +|=.++||||+.+|++.=+|||.+-
T Consensus       454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence            445555555544  3456664     33  5778999999999999999999874


No 316
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=59.30  E-value=51  Score=32.00  Aligned_cols=139  Identities=12%  Similarity=0.053  Sum_probs=74.8

Q ss_pred             ccceEccCCcEEEEEEEEcCCcEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCeeeEEEEE--------------e---
Q 009979          190 DENVIGEGGYGIVYHGVLEDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYC--------------A---  252 (521)
Q Consensus       190 ~~~~LG~G~fG~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~hpniv~l~~~~--------------~---  252 (521)
                      ..+..-.|. +-||.+.. ++..|+||-.   .....+.+-.++...-.+..|+.--+. +.              .   
T Consensus        73 ~I~~s~~Gs-tgvff~~t-d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~~~  146 (342)
T 1cja_A           73 GIERSEKGT-EGLFFVET-ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSF  146 (342)
T ss_dssp             EEEECCSTT-SCEEEEEE-SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSS
T ss_pred             EEEeccCCC-CCeEEEEe-CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhhhh
Confidence            344444554 55666665 4778889943   233345555566666667777633222 11              0   


Q ss_pred             ------eCCeeeEEEEeccCCchHHhhhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eee-cCCCCCCeEeCC
Q 009979          253 ------EGAHRMLVYEYIDNGNLEQWLHGDVGPHSPLTWEIRMNIILGTAKGLTYLHEGLEPK-VVH-RDIKSSNILLDK  324 (521)
Q Consensus       253 ------~~~~~~lV~e~~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~~ia~al~~LH~~~~~~-iiH-rDik~~NILl~~  324 (521)
                            .....+++|+|++|..|...-+...  ...+..+....+  +-+-++..+..+.+.- .+. .--.+.|||+++
T Consensus       147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~  222 (342)
T 1cja_A          147 RVITTLANQANILLMELVRGITLNKLTTTSA--PEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSE  222 (342)
T ss_dssp             CHHHHHTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEES
T ss_pred             HHHHHhhcccceehhhhcCCCccccchhhhh--hhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheEEeC
Confidence                  1124569999999866665322110  011233332222  2234566766554322 211 124788999976


Q ss_pred             CCC-ceEeeccccee
Q 009979          325 QWN-PKLSDFGLAKL  338 (521)
Q Consensus       325 ~~~-vkL~DFGla~~  338 (521)
                      ++. +.++|-+++..
T Consensus       223 ~n~~~~~IDhn~af~  237 (342)
T 1cja_A          223 RGATVVPIDSKIIPL  237 (342)
T ss_dssp             BTTCEEECSCCCCCC
T ss_pred             CCCeEEEEcCCcccc
Confidence            544 88999888864


No 317
>2nrg_A Intrinsic membrane protein PUFX; BENT transmembrane helix, photosynthesis,membrane protein; NMR {Rhodobacter sphaeroides}
Probab=59.05  E-value=12  Score=27.87  Aligned_cols=25  Identities=36%  Similarity=0.693  Sum_probs=17.7

Q ss_pred             CCCcccchhhhccccccccchhHHHH
Q 009979            1 MSHYSFLNDQLSKRTSIFGLRLWVVL   26 (521)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~g~~~~~~i   26 (521)
                      |..-+..++.|. ..+.++++.|+.-
T Consensus         1 ma~ks~f~dyL~-~~~k~rLr~wi~~   25 (82)
T 2nrg_A            1 MADKTIFNDHLN-TNPKTNLRLWVAF   25 (82)
T ss_dssp             CCCSSGGGSSSC-CCHHHHHHHHHHH
T ss_pred             CcchhHhhhhcc-cCcchhHHHHHHH
Confidence            455566777776 4456699999876


No 318
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=63.46  E-value=2  Score=27.26  Aligned_cols=28  Identities=18%  Similarity=0.193  Sum_probs=11.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009979           22 LWVVLGICVGAGIVLVLFLISLWFTSKRN   50 (521)
Q Consensus        22 ~~~~i~i~~g~~~v~~l~~l~~~~~~rr~   50 (521)
                      +-+++++.+-++++++. +++++..+++|
T Consensus         8 ~~vl~avlal~vi~iis-LIiLi~~w~qK   35 (39)
T 2l6w_A            8 VVVISAILALVVLTIIS-LIILIMLWQKK   35 (39)
Confidence            34444444444333332 34444444444


No 319
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=58.45  E-value=11  Score=23.89  Aligned_cols=13  Identities=15%  Similarity=-0.013  Sum_probs=7.6

Q ss_pred             HHHHHHHHHHHHH
Q 009979           24 VVLGICVGAGIVL   36 (521)
Q Consensus        24 ~~i~i~~g~~~v~   36 (521)
                      +++.|+.|+.+-+
T Consensus        11 ~i~lII~~vmaGi   23 (40)
T 1afo_A           11 EITLIIFGVMAGV   23 (40)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHH
Confidence            5666666665433


No 320
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=55.41  E-value=11  Score=24.65  Aligned_cols=23  Identities=13%  Similarity=0.077  Sum_probs=12.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcc
Q 009979           26 LGICVGAGIVLVLFLISLWFTSK   48 (521)
Q Consensus        26 i~i~~g~~~v~~l~~l~~~~~~r   48 (521)
                      .+|+.|++..++++++.+.+.+|
T Consensus        10 ~~Iv~gvi~~ivliGl~lLliwk   32 (43)
T 2k9j_B           10 LVVLLSVMGAILLIGLAALLIWK   32 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHHHHHHHHH
Confidence            44555555555555555555555


No 321
>2ls4_A High affinity copper uptake protein 1; HCTR1 TMDS, oligomerization, metal transport; NMR {Homo sapiens}
Probab=60.15  E-value=2.5  Score=24.49  Aligned_cols=15  Identities=20%  Similarity=0.530  Sum_probs=12.3

Q ss_pred             chhHHHHHHHHHHHH
Q 009979           20 LRLWVVLGICVGAGI   34 (521)
Q Consensus        20 ~~~~~~i~i~~g~~~   34 (521)
                      .|.|+++.|++|+.+
T Consensus         1 YNg~l~iavvlGa~~   15 (26)
T 2ls4_A            1 YNGYLCIAVAAGAGT   15 (26)
Confidence            378999999999854


No 322
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=52.73  E-value=11  Score=30.79  Aligned_cols=7  Identities=29%  Similarity=1.032  Sum_probs=2.9

Q ss_pred             hHHHHHH
Q 009979           22 LWVVLGI   28 (521)
Q Consensus        22 ~~~~i~i   28 (521)
                      +|+++++
T Consensus        98 ~~iii~~  104 (119)
T 2kog_A           98 MMIILGV  104 (119)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444333


No 323
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=50.03  E-value=13  Score=23.83  Aligned_cols=27  Identities=19%  Similarity=0.138  Sum_probs=16.2

Q ss_pred             HHHHHHHHHHHHHHH-HHHhhhcccccc
Q 009979           26 LGICVGAGIVLVLFL-ISLWFTSKRNSN   52 (521)
Q Consensus        26 i~i~~g~~~v~~l~~-l~~~~~~rr~~~   52 (521)
                      .+|++|++.-+++++ +++.++.-+|+|
T Consensus        13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rRr   40 (41)
T 2k9y_A           13 LAVIGGVAVGVVLLLVLAGVGFFIHRRR   40 (41)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred             EEEEeehhHHHHHHHHHHHHheeEeeec
Confidence            457777766555545 555566666544


No 324
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=49.87  E-value=23  Score=23.23  Aligned_cols=27  Identities=22%  Similarity=0.178  Sum_probs=16.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccc
Q 009979           24 VVLGICVGAGIVLVLFLISLWFTSKRNS   51 (521)
Q Consensus        24 ~~i~i~~g~~~v~~l~~l~~~~~~rr~~   51 (521)
                      .+||++ .++++.+++++.+-.++..++
T Consensus        17 ~vVGvl-l~vi~~l~~~~~~RRR~~~~k   43 (44)
T 2jwa_A           17 AVVGIL-LVVVLGVVFGILIKRRQQKIR   43 (44)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHH-HHHHHHHHHHhheehhhhhcc
Confidence            456633 445555666777888776543


No 325
>2dw3_A Intrinsic membrane protein PUFX; quinone exchange, photosynthesis, light- harvesting, GXXXG motif, dimerization; NMR {Rhodobacter sphaeroides} PDB: 2ita_A
Probab=48.93  E-value=18  Score=26.61  Aligned_cols=19  Identities=42%  Similarity=0.803  Sum_probs=12.6

Q ss_pred             chhhhccccccccchhHHHH
Q 009979            7 LNDQLSKRTSIFGLRLWVVL   26 (521)
Q Consensus         7 ~~~~~~~~~~~~g~~~~~~i   26 (521)
                      .++-|. ..+.++|++|+..
T Consensus         6 ~~dyL~-~~~k~rLr~~i~~   24 (77)
T 2dw3_A            6 FNDHLN-TNPKTNLRLWVAF   24 (77)
T ss_dssp             TCCSCC-CCHHHHHHHHHHH
T ss_pred             HHHHhc-cCcchhHHHHHHH
Confidence            455555 3455699999876


No 326
>1s7q_A H-2KB, H-2 class I histocompatibility antigen, K-B alpha chain; LCMV, MHC class I, immune escape, immune system; 1.99A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1s7r_A 1s7s_A 1s7t_A 1bii_A 3qul_A 1s7v_A 1s7w_A 1s7x_A 3quk_A 1s7u_A 1nez_A*
Probab=45.47  E-value=4.4  Score=39.94  Aligned_cols=13  Identities=0%  Similarity=-0.227  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHHHH
Q 009979           22 LWVVLGICVGAGI   34 (521)
Q Consensus        22 ~~~~i~i~~g~~~   34 (521)
                      ...+|||++|+++
T Consensus       280 ~~~~~~i~~~~~~  292 (348)
T 1s7q_A          280 TVSNMATVAVLVV  292 (348)
T ss_dssp             -------------
T ss_pred             cccEEEEEeehhh
Confidence            3446677777544


No 327
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=43.33  E-value=9.7  Score=29.45  Aligned_cols=10  Identities=20%  Similarity=0.777  Sum_probs=4.5

Q ss_pred             hhHHHHHHHH
Q 009979           21 RLWVVLGICV   30 (521)
Q Consensus        21 ~~~~~i~i~~   30 (521)
                      |+|+++++++
T Consensus        69 K~~iii~~iv   78 (91)
T 3hd7_A           69 KMMIILGVIC   78 (91)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            4455444433


No 328
>2lp1_A C99; alzheimer'S D membrane protein, transmembrane Pro; NMR {Homo sapiens}
Probab=47.92  E-value=5.4  Score=31.89  Aligned_cols=29  Identities=21%  Similarity=0.430  Sum_probs=16.1

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 009979           19 GLRLWVVLGICVGAGIVLVLFLISLWFTS   47 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l~~l~~~~~~   47 (521)
                      |.+--.++|+.++++++.+.+++.+.+.+
T Consensus        26 ~~~~~a~igL~v~~vai~~viVv~l~v~r   54 (122)
T 2lp1_A           26 GSNKGAIIGLMVGGVVIATVIVITLVMLK   54 (122)
Confidence            44555667777766655554444444433


No 329
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=41.44  E-value=1.1  Score=46.49  Aligned_cols=31  Identities=13%  Similarity=0.123  Sum_probs=25.9

Q ss_pred             hHHHHHHHHHHHhcCCCCCeeeEEEEEeeCC
Q 009979          225 AEKEFKVEVEAIGRVRHKNLVRLLGYCAEGA  255 (521)
Q Consensus       225 ~~~~~~~Ei~~l~~l~hpniv~l~~~~~~~~  255 (521)
                      ..++|..|++.+.+++|+|+|+++|||....
T Consensus       322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          322 GSETERLECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence            3578999999999999999999999997754


No 330
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=39.63  E-value=20  Score=27.59  Aligned_cols=19  Identities=26%  Similarity=0.548  Sum_probs=9.7

Q ss_pred             HHHHHHHHHHHHHHHHHhh
Q 009979           27 GICVGAGIVLVLFLISLWF   45 (521)
Q Consensus        27 ~i~~g~~~v~~l~~l~~~~   45 (521)
                      -+++|++++++++++++|+
T Consensus        71 ~iii~~iv~~il~ii~~~~   89 (91)
T 3hd7_A           71 MIILGVICAIILIIIIVYF   89 (91)
T ss_dssp             HHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            4555555555554554443


No 331
>2k9p_A Pheromone alpha factor receptor; GPCR, micelle, structurral biology, fragment, G-protein COUP receptor, glycoprotein, membrane; NMR {Saccharomyces cerevisiae}
Probab=38.39  E-value=34  Score=25.64  Aligned_cols=29  Identities=14%  Similarity=0.322  Sum_probs=15.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009979           20 LRLWVVLGICVGAGIVLVLFLISLWFTSKRN   50 (521)
Q Consensus        20 ~~~~~~i~i~~g~~~v~~l~~l~~~~~~rr~   50 (521)
                      .+.-++-|.-+||.++++  ++.|.+.+|||
T Consensus        19 ~~~~I~~G~~iGAs~lll--iil~lltkkrr   47 (80)
T 2k9p_A           19 VTQAILFGVRSGAAALTL--IVVWITSRSRK   47 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHH--HHHHHHTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence            455666777777755433  33344444433


No 332
>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis}
Probab=38.37  E-value=11  Score=28.25  Aligned_cols=19  Identities=21%  Similarity=0.043  Sum_probs=12.9

Q ss_pred             cccchhHHHHHHHHHHHHH
Q 009979           17 IFGLRLWVVLGICVGAGIV   35 (521)
Q Consensus        17 ~~g~~~~~~i~i~~g~~~v   35 (521)
                      +||+..|-++.|++.+++|
T Consensus         2 Mf~ig~~ElliIlvVaLlv   20 (78)
T 2l16_A            2 FSNIGIPGLILIFVIALII   20 (78)
T ss_dssp             CSSSCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhhe
Confidence            4788888887776655443


No 333
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=36.28  E-value=46  Score=21.27  Aligned_cols=27  Identities=19%  Similarity=0.121  Sum_probs=16.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhh
Q 009979           20 LRLWVVLGICVGAGIVLVLFLISLWFT   46 (521)
Q Consensus        20 ~~~~~~i~i~~g~~~v~~l~~l~~~~~   46 (521)
                      -.+--+-+-++|+++++...+|++-+.
T Consensus        17 ~Dm~si~~~IVGaLvil~VAGLiysm~   43 (46)
T 1pfi_A           17 GDMKAIGGYIVGALVILAVAGLIYSML   43 (46)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345566778888877666555554443


No 334
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=34.79  E-value=26  Score=25.08  Aligned_cols=21  Identities=10%  Similarity=0.167  Sum_probs=11.0

Q ss_pred             ccchhHHHHHHHHHHHHHHHH
Q 009979           18 FGLRLWVVLGICVGAGIVLVL   38 (521)
Q Consensus        18 ~g~~~~~~i~i~~g~~~v~~l   38 (521)
                      +.-...=+.|.+++++++++.
T Consensus        12 YDY~tLRigGLifA~vLfi~G   32 (67)
T 2jp3_A           12 YDWESLQLGGLIFGGLLCIAG   32 (67)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHheecchhhHHHHHHHH
Confidence            333444556666666554443


No 335
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=33.10  E-value=41  Score=27.32  Aligned_cols=15  Identities=7%  Similarity=0.025  Sum_probs=6.2

Q ss_pred             HHHHHHHHHHHHHHH
Q 009979           24 VVLGICVGAGIVLVL   38 (521)
Q Consensus        24 ~~i~i~~g~~~v~~l   38 (521)
                      -+..|++++++++++
T Consensus        97 K~~iii~~iv~iii~  111 (119)
T 2kog_A           97 KMMIILGVICAIILI  111 (119)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            344444444433333


No 336
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=29.16  E-value=76  Score=35.94  Aligned_cols=60  Identities=22%  Similarity=0.233  Sum_probs=38.5

Q ss_pred             chHHhhhcCCCCCCCCCHHHH-HHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          268 NLEQWLHGDVGPHSPLTWEIR-MNIILGTA--KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       268 ~L~~~l~~~~~~~~~l~~~~~-~~i~~~ia--~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      .|.+|+....   ....+..+ ..++..+|  ..+.|+=     ||  +|=.++||||+.+|++.-+|||.+-
T Consensus       899 ~L~~~f~~~~---~~~~~~~ar~nF~~S~A~ysvv~YiL-----gi--gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          899 TLHQWLKDKN---KGEIYDAAIDLFTRSCAGYCVATFIL-----GI--GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             HHHHHHHTTS---CTTSHHHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             HHHHHHHhcC---ChHHHHHHHHHHHHHhhhhhheEEEE-----ee--cCCCCcceEEeCCCCEEEEeehhhh
Confidence            4555555432   33445443 34444433  3455554     33  6778999999999999999999884


No 337
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=28.95  E-value=26  Score=37.66  Aligned_cols=45  Identities=31%  Similarity=0.268  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeEeCCCCCceEeecccce
Q 009979          286 EIRMNIILGTA--KGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKLSDFGLAK  337 (521)
Q Consensus       286 ~~~~~i~~~ia--~al~~LH~~~~~~iiHrDik~~NILl~~~~~vkL~DFGla~  337 (521)
                      ..+..++..+|  ..+.|+=     ||  +|=.++||||+.+|++.-+|||.+-
T Consensus       529 ~ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence            34445555443  3355553     33  7888999999999999999999874


No 338
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=28.46  E-value=23  Score=22.18  Aligned_cols=7  Identities=0%  Similarity=0.116  Sum_probs=2.8

Q ss_pred             HHhhhcc
Q 009979           42 SLWFTSK   48 (521)
Q Consensus        42 ~~~~~~r   48 (521)
                      ..|+..|
T Consensus        16 fYFl~iR   22 (37)
T 2rdd_B           16 FYFMILR   22 (37)
T ss_dssp             HHHHTHH
T ss_pred             HHHHHhh
Confidence            3344334


No 339
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=25.05  E-value=55  Score=23.90  Aligned_cols=20  Identities=20%  Similarity=0.222  Sum_probs=10.5

Q ss_pred             cchhHHHHHHHHHHHHHHHH
Q 009979           19 GLRLWVVLGICVGAGIVLVL   38 (521)
Q Consensus        19 g~~~~~~i~i~~g~~~v~~l   38 (521)
                      .-...=+.|.+.+++++++.
T Consensus        15 DY~tLRigGLifA~vLfi~G   34 (74)
T 2zxe_G           15 DYYRLRVVGLIVAAVLCVIG   34 (74)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHheeccchhHHHHHHHH
Confidence            33344456666666554443


No 340
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=23.40  E-value=60  Score=23.45  Aligned_cols=17  Identities=6%  Similarity=0.245  Sum_probs=8.7

Q ss_pred             hhHHHHHHHHHHHHHHH
Q 009979           21 RLWVVLGICVGAGIVLV   37 (521)
Q Consensus        21 ~~~~~i~i~~g~~~v~~   37 (521)
                      ...=+.|.+++++++++
T Consensus        14 ~tLRiGGLifA~vLfi~   30 (72)
T 2jo1_A           14 QSLQIGGLVIAGILFIL   30 (72)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHhhccchHHHHHHHHH
Confidence            34445666666554443


No 341
>3arc_X Photosystem II PSBX protein; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3prq_X* 3prr_X* 3kzi_X* 3a0b_X* 3a0h_X*
Probab=22.88  E-value=1.1e+02  Score=19.42  Aligned_cols=12  Identities=25%  Similarity=0.492  Sum_probs=5.8

Q ss_pred             HHHHHHHHHHHH
Q 009979           26 LGICVGAGIVLV   37 (521)
Q Consensus        26 i~i~~g~~~v~~   37 (521)
                      ..++.|++++++
T Consensus        11 ~Sl~aG~vvvv~   22 (39)
T 3arc_X           11 IGLLSGAVVLGL   22 (39)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            344555554444


No 342
>1spf_A Pulmonary surfactant-associated polypeptide C; lipoprotein(surface FILM); NMR {Sus scrofa} SCOP: j.35.1.1
Probab=20.58  E-value=1.4e+02  Score=17.90  Aligned_cols=11  Identities=18%  Similarity=0.338  Sum_probs=4.8

Q ss_pred             ccchhHHHHHH
Q 009979           18 FGLRLWVVLGI   28 (521)
Q Consensus        18 ~g~~~~~~i~i   28 (521)
                      .++|-.+++..
T Consensus         8 ~~lKrLlivVv   18 (35)
T 1spf_A            8 VNLKRLLVVVV   18 (35)
T ss_dssp             SHHHHHHHHHH
T ss_pred             cchheEEEEEe
Confidence            34554444433


No 343
>3bz1_X Photosystem II PSBX protein; electron transport photosystem, membrane complex, transmembrane alpha-helix; HET: CLA PHO HEM PL9 BCR DGD LHG SQD LMG LMT; 2.90A {Thermosynechococcus elongatus} PDB: 1s5l_X* 3bz2_X*
Probab=20.43  E-value=1.4e+02  Score=19.94  Aligned_cols=12  Identities=25%  Similarity=0.492  Sum_probs=6.0

Q ss_pred             HHHHHHHHHHHH
Q 009979           26 LGICVGAGIVLV   37 (521)
Q Consensus        26 i~i~~g~~~v~~   37 (521)
                      ..++.|++++++
T Consensus        21 ~SlvaG~vVvv~   32 (50)
T 3bz1_X           21 IGLLSGAVVLGL   32 (50)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            345555554444


Done!