Your job contains 1 sequence.
>009981
MAIATFAPSFCCTRTEPTQLPRFRLTHSHKLQSQTRRLSVSCRLNSSNSLSPADNNNNNR
YKLHDGASSQGRRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALAAAGVEGVVVEVWW
GVVERDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEID
KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKL
MWSWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDN
GLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSE
LTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAA
RICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSFSFNFLRMDKNMFEYHNWVRF
TRFVRQLSGSSIFRAKLDFRGDIRPSSASDFAKVGLAFAYC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009981
(521 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076086 - symbol:BAM1 "beta-amylase 1" species... 592 1.3e-105 2
TAIR|locus:2130504 - symbol:CT-BMY "chloroplast beta-amyl... 588 3.7e-99 2
TAIR|locus:2162152 - symbol:BAM4 "beta-amylase 4" species... 441 5.4e-65 2
TAIR|locus:2062535 - symbol:BAM6 "beta-amylase 6" species... 626 3.4e-61 1
TAIR|locus:2129810 - symbol:BAM5 "beta-amylase 5" species... 542 2.3e-54 2
TAIR|locus:2127033 - symbol:BAM2 "beta-amylase 2" species... 555 1.1e-53 1
TAIR|locus:2180029 - symbol:BMY3 "beta-amylase 3" species... 535 1.5e-51 1
TAIR|locus:2158455 - symbol:BMY2 "beta-amylase 2" species... 487 1.8e-46 1
TAIR|locus:2050720 - symbol:BAM7 "beta-amylase 7" species... 468 3.2e-44 1
>TAIR|locus:2076086 [details] [associations]
symbol:BAM1 "beta-amylase 1" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0005983 "starch catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] BRENDA:3.2.1.2 InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005829
GO:GO:0005634 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
GO:GO:0009414 GO:GO:0005983 EMBL:AP001297 EMBL:AF367293
EMBL:AY074393 EMBL:AY078046 EMBL:AY096517 EMBL:AK226274
IPI:IPI00518242 RefSeq:NP_189034.1 UniGene:At.8278 HSSP:P16098
ProteinModelPortal:Q9LIR6 SMR:Q9LIR6 STRING:Q9LIR6 CAZy:GH14
PaxDb:Q9LIR6 PRIDE:Q9LIR6 EnsemblPlants:AT3G23920.1 GeneID:821975
KEGG:ath:AT3G23920 TAIR:At3g23920 eggNOG:NOG77898
HOGENOM:HOG000238755 InParanoid:Q9LIR6 KO:K01177 OMA:MGNTIVE
ProtClustDB:PLN00197 BioCyc:MetaCyc:AT3G23920-MONOMER
Genevestigator:Q9LIR6 GO:GO:0016161 Uniprot:Q9LIR6
Length = 575
Score = 592 (213.5 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 113/249 (45%), Positives = 153/249 (61%)
Query: 243 SWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGL 302
+W+ +G FQCYDKY L+SL A A G EWG GP A + PE T+FF+ + G
Sbjct: 291 TWKFPGIGAFQCYDKYSLSSLKAAAETYGKPEWGSTGPTDAGHYNNWPEDTQFFKKEGGG 350
Query: 303 WNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELT 362
WN+ YG+FFL WYS MLL HGERI A++IF V S K+ GIHWHYGT SH ELT
Sbjct: 351 WNSEYGDFFLSWYSQMLLDHGERILSSAKSIFENMGVKISVKIAGIHWHYGTRSHAPELT 410
Query: 363 AGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARI 422
AGYYNT RDG+LPIA++ R+ +C EMRD ++ Q + +PE + Q+ LA
Sbjct: 411 AGYYNTRFRDGYLPIAQMLARHNAIFNFTCIEMRDHEQPQ-DALCAPEKLVNQVALATLA 469
Query: 423 CEIPLEGENSATSLDDAAFQQVIKMSKFY----SEGLEKPSFSFNFLRMDKNMFEYHNWV 478
E+PL GEN+ DD A +Q++K S +EG + +F +LRM+ +F+ NW
Sbjct: 470 AEVPLAGENALPRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELFQADNWG 529
Query: 479 RFTRFVRQL 487
+F FV+++
Sbjct: 530 KFVAFVKKM 538
Score = 473 (171.6 bits), Expect = 1.3e-105, Sum P(2) = 1.3e-105
Identities = 90/175 (51%), Positives = 115/175 (65%)
Query: 66 GASSQGRRNGSPVFVKLPEDSTMIGGKVKRRKAMAQSFKALXXXXXXXXXXXXXXXXXXR 125
G +G G PVFV +P DS +G V RRKAM S +AL +
Sbjct: 97 GGKKEGG-GGVPVFVMMPLDSVTMGNTVNRRKAMKASLQALKSAGVEGIMIDVWWGLVEK 155
Query: 126 DRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDL 185
+ PG Y+W GY +L+ LA GLKV+A+++FHQCG GD +PLPQWV+EE+DKDPDL
Sbjct: 156 ESPGTYNWGGYNELLELAKKLGLKVQAVMSFHQCGGNVGDSVTIPLPQWVVEEVDKDPDL 215
Query: 186 AYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKL 240
AY+D++GRRN EYISLG D LPVL+GR+P+Q Y DFMR FRD F+ LLG I ++
Sbjct: 216 AYTDQWGRRNHEYISLGADTLPVLKGRTPVQCYADFMRAFRDNFKHLLGETIVEI 270
Score = 37 (18.1 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 474 YHNWVRFTRFVRQLSG 489
Y+NW T+F ++ G
Sbjct: 334 YNNWPEDTQFFKKEGG 349
>TAIR|locus:2130504 [details] [associations]
symbol:CT-BMY "chloroplast beta-amylase" species:3702
"Arabidopsis thaliana" [GO:0000272 "polysaccharide catabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0005983 "starch catabolic process"
evidence=IMP;TAS] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0000024 "maltose
biosynthetic process" evidence=IMP] BRENDA:3.2.1.2
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842
PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0009409 GO:GO:0005983
CAZy:GH14 eggNOG:NOG77898 HOGENOM:HOG000238755 KO:K01177
GO:GO:0016161 EMBL:AJ250341 EMBL:Z97342 EMBL:AL161545 EMBL:AY052315
EMBL:AY061898 EMBL:AY087592 IPI:IPI00524115 PIR:D71439 PIR:H85190
PIR:T52556 RefSeq:NP_567523.1 UniGene:At.22021 UniGene:At.23528
UniGene:At.47944 UniGene:At.67939 HSSP:P10538
ProteinModelPortal:O23553 SMR:O23553 STRING:O23553 PaxDb:O23553
PRIDE:O23553 EnsemblPlants:AT4G17090.1 GeneID:827419
KEGG:ath:AT4G17090 TAIR:At4g17090 InParanoid:Q9SMW0 OMA:EHANCSP
ProtClustDB:PLN02803 BioCyc:ARA:AT4G17090-MONOMER
BioCyc:MetaCyc:AT4G17090-MONOMER Genevestigator:O23553
GO:GO:0000024 Uniprot:O23553
Length = 548
Score = 588 (212.0 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 115/246 (46%), Positives = 153/246 (62%)
Query: 243 SWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGL 302
+WR +GEFQCYDKYM +SL A A IG WG GP A PE TEFFR D G
Sbjct: 271 TWRFPGIGEFQCYDKYMKSSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEFFRRD-GT 329
Query: 303 WNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELT 362
WN+ YG FF+EWYSG LL HG+++ A+ IF+G+ S KV GIHWHY T SH +ELT
Sbjct: 330 WNSEYGKFFMEWYSGKLLEHGDQLLSSAKGIFQGSGAKLSGKVAGIHWHYNTRSHAAELT 389
Query: 363 AGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARI 422
AGYYNT DG+LPIA++F ++G L +C EM+D ++ + + SPEG ++Q+ A R
Sbjct: 390 AGYYNTRNHDGYLPIAKMFNKHGVVLNFTCMEMKDGEQPE-HANCSPEGLVKQVQNATRQ 448
Query: 423 CEIPLEGENSATSLDDAAFQQVIKMSKFYS-EGLEKPSFSFNFLRMDKNMFEYHNWVRFT 481
L GEN+ D +AF QV+ ++ S GL +F +LRM+K +FE NW +
Sbjct: 449 AGTELAGENALERYDSSAFGQVVATNRSDSGNGLT----AFTYLRMNKRLFEGQNWQQLV 504
Query: 482 RFVRQL 487
FV+ +
Sbjct: 505 EFVKNM 510
Score = 416 (151.5 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 81/180 (45%), Positives = 111/180 (61%)
Query: 62 KLHDGASSQGRRNGS-PVFVKLPEDSTMIGGKVKRRKAMAQSFKALXXXXXXXXXXXXXX 120
KLH + + + S PVFV LP D+ + G + + +AM S AL
Sbjct: 71 KLHVLSYPHSKNDASVPVFVMLPLDTVTMSGHLNKPRAMNASLMALKGAGVEGVMVDAWW 130
Query: 121 XXXXRDRPGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEID 180
+D P Y+W GY +LI + GLK++ +++FHQCG GD +PLP WVLEEI
Sbjct: 131 GLVEKDGPMNYNWEGYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEIS 190
Query: 181 KDPDLAYSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKL 240
K+PDL Y+D+ GRRN EYISLGCD +PVLRGR+PIQ Y+DFMR+FR+ F +G +I ++
Sbjct: 191 KNPDLVYTDKSGRRNPEYISLGCDSVPVLRGRTPIQVYSDFMRSFRERFEGYIGGVIAEI 250
>TAIR|locus:2162152 [details] [associations]
symbol:BAM4 "beta-amylase 4" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation
binding" evidence=IEA] [GO:0005983 "starch catabolic process"
evidence=IMP] [GO:0006914 "autophagy" evidence=RCA]
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842 PROSITE:PS00506
PROSITE:PS00679 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003824 GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005983 HSSP:P16098
CAZy:GH14 HOGENOM:HOG000238755 EMBL:AB009050 EMBL:AY045834
EMBL:BT001909 EMBL:AK317617 IPI:IPI00546276 RefSeq:NP_568829.2
UniGene:At.49179 UniGene:At.71092 ProteinModelPortal:Q9FM68
SMR:Q9FM68 STRING:Q9FM68 PRIDE:Q9FM68 EnsemblPlants:AT5G55700.1
GeneID:835664 KEGG:ath:AT5G55700 TAIR:At5g55700 eggNOG:NOG249830
InParanoid:Q9FM68 OMA:DAREKSR PhylomeDB:Q9FM68 ProtClustDB:PLN02161
Genevestigator:Q9FM68 Uniprot:Q9FM68
Length = 531
Score = 441 (160.3 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 97/253 (38%), Positives = 135/253 (53%)
Query: 244 WRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLW 303
W+ +GEFQC+DKYM+ L A A + G +WG P P FF N +
Sbjct: 282 WKFPGIGEFQCHDKYMMEDLMAVASQEGKPQWGSRDPPNTGCYNSFPSGVPFFEEGNDSF 341
Query: 304 NTAYGNFFLEWYSGMLLLHGERICREAETIFRGTR------VNTSAKVGGIHWHYGTPSH 357
+ YG FFLEWYSG L+ H + I +A + R + V AK+GGI+W Y T SH
Sbjct: 342 LSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYWWYKTSSH 401
Query: 358 PSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRD--VDEKQMNPFSSPEGFLRQ 415
P+ELTAGYYNTS RDG+ P+A + R+G L C +M D + EK + SPEG RQ
Sbjct: 402 PAELTAGYYNTSLRDGYDPVASVLSRHGAALNIPCLDMADSEIPEKYL---CSPEGLRRQ 458
Query: 416 LLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSFSFNFLRMDKNMFEYH 475
+ ++ I + G N++ D+ +Q I+ + G SF F RM++ +F
Sbjct: 459 IHDVSKKWTIHVTGRNTSERFDEMGLRQ-IRENCVQPNG--DTLRSFTFCRMNEKIFRVE 515
Query: 476 NWVRFTRFVRQLS 488
NW F F+RQ+S
Sbjct: 516 NWNNFVPFIRQMS 528
Score = 239 (89.2 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 60/173 (34%), Positives = 82/173 (47%)
Query: 72 RRNGSPVFVKLPEDSTMIGG----KVKRRKAMAQSFKALXXXXXXXXXXXXXXXXXXRDR 127
R PVFV +P D+ I K+KR KA+ S KAL R
Sbjct: 88 RHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFS 147
Query: 128 PGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAY 187
P + W Y +L L S GLK+ L FH G + LP W+ E D + D+ Y
Sbjct: 148 PLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDVNKDIYY 207
Query: 188 SDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKL 240
D+ G N +Y++LG D LP+ GR+ +Q Y DFM +F F P LG +I ++
Sbjct: 208 RDKSGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYLGNVIEEI 260
>TAIR|locus:2062535 [details] [associations]
symbol:BAM6 "beta-amylase 6" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0016161
"beta-amylase activity" evidence=IEA;ISS] [GO:0043169 "cation
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR001371 InterPro:IPR001554 InterPro:IPR013781
InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750 PRINTS:PR00842
PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043169 Gene3D:3.20.20.80
InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272 EMBL:AC005700
CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161 HSSP:P10538
eggNOG:NOG322510 ProtClustDB:PLN02801 EMBL:AY136463 IPI:IPI00524134
PIR:C84731 RefSeq:NP_180788.2 UniGene:At.38097 UniGene:At.38099
ProteinModelPortal:Q8L762 SMR:Q8L762 PaxDb:Q8L762 PRIDE:Q8L762
EnsemblPlants:AT2G32290.1 GeneID:817789 KEGG:ath:AT2G32290
TAIR:At2g32290 InParanoid:Q8L762 OMA:RENMEDF PhylomeDB:Q8L762
Genevestigator:Q8L762 Uniprot:Q8L762
Length = 577
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 138/380 (36%), Positives = 205/380 (53%)
Query: 128 PGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAY 187
P Y W Y +L + + GLK++A+++FH+CG GD +P+P+WVLE D +PD+ Y
Sbjct: 130 PKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDIFY 189
Query: 188 SDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL--GAIIT------- 238
+++ G RN E +SL D L + RGR+ ++ Y D+M++FR+ + G II
Sbjct: 190 TNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGP 249
Query: 239 --KLMW-------SWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQD 289
+L + W +GEFQCYDKY+ + R IG EW P A
Sbjct: 250 AGELRYPSYSETQGWVFPGIGEFQCYDKYLRSDYEEEVRRIGHPEWKL--PENAGEYNSV 307
Query: 290 PEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIH 349
P TEFF NG + GNFFL WYS LLLHG++I EA +F G ++ +AKV GIH
Sbjct: 308 PGETEFFEYSNGTYLKEEGNFFLSWYSKKLLLHGDQILDEANKVFLGCKLKIAAKVSGIH 367
Query: 350 WHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSP 409
W Y T SH +ELTAGYYN RDG+ IA+I R+ L +C EM++ E+ S P
Sbjct: 368 WWYKTESHAAELTAGYYNLKNRDGYRAIAKIMRRHHAILNFTCLEMKNT-EQPAKAKSGP 426
Query: 410 EGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLE-KPS-FSFNFLRM 467
+ ++Q+L + I + GEN+ D + Q+I ++ + KP F F +LR+
Sbjct: 427 QELVQQVLSSGWREGIEVAGENALPRFDRNGYNQIILNARPNGVNQDGKPRMFGFTYLRL 486
Query: 468 DKNMFEYHNWVRFTRFVRQL 487
+ N+ F F++++
Sbjct: 487 SDKLLNEPNFSTFKMFLKRM 506
>TAIR|locus:2129810 [details] [associations]
symbol:BAM5 "beta-amylase 5" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016161 "beta-amylase activity"
evidence=IEA;ISS;IDA] [GO:0043169 "cation binding" evidence=IEA]
[GO:0080027 "response to herbivore" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0005983 "starch catabolic process"
evidence=IDA] InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:Z97338 GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0005983
EMBL:AL161540 CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161
EMBL:M73467 EMBL:D43783 EMBL:S77076 EMBL:AF424573 EMBL:AY142024
EMBL:AK316869 EMBL:AK226353 IPI:IPI00517770 IPI:IPI00532891
PIR:B71416 RefSeq:NP_567460.1 RefSeq:NP_849389.1 UniGene:At.25187
ProteinModelPortal:P25853 SMR:P25853 STRING:P25853 PaxDb:P25853
PRIDE:P25853 EnsemblPlants:AT4G15210.1 GeneID:827185
KEGG:ath:AT4G15210 TAIR:At4g15210 eggNOG:NOG322510
InParanoid:P25853 OMA:RYPSYPQ PhylomeDB:P25853 ProtClustDB:PLN02801
Genevestigator:P25853 GO:GO:0080027 Uniprot:P25853
Length = 498
Score = 542 (195.9 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 118/335 (35%), Positives = 184/335 (54%)
Query: 128 PGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAY 187
P YDW Y L L + GLK++A+++FHQCG GD +P+PQWV + D DPD+ Y
Sbjct: 67 PKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDIVTIPIPQWVRDVGDNDPDIYY 126
Query: 188 SDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL--GAIITKLMWSWR 245
++R G R++EY+S+G D LP+ GR+ +Q Y+D+M +F++ L+ G I+ +
Sbjct: 127 TNRKGTRDIEYLSIGVDNLPLFAGRTAVQLYSDYMSSFKENMADLIEAGVIVDIEVGLGP 186
Query: 246 SRELGEFQCYDK---YMLASLNA--CAREIGMREWGDGG----------PIGASNLMQDP 290
+ EL + Y + ++ + C + +++ + P A P
Sbjct: 187 AGEL-RYPSYPQSQGWVFPGIGEFQCYDKYLKKDFKEAAAKAGHPEWDLPEDAGEYNDKP 245
Query: 291 EHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHW 350
E T FF+ D G + + G FF+ WYS L+ HG++I EA IF G +VN +AKV GIHW
Sbjct: 246 EETGFFKKD-GTYVSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHW 304
Query: 351 HYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPE 410
Y SH +ELTAGYYN RDG+ PIAR+ ++ L +C EM+D D S+P+
Sbjct: 305 LYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTA-EALSAPQ 363
Query: 411 GFLRQLLLAARICEIPLEGENSATSLDDAAFQQVI 445
++++L A I + GEN+ + + Q++
Sbjct: 364 ELVQEVLSKAWKEGIEVAGENALETYGAKGYNQIL 398
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 91/250 (36%), Positives = 135/250 (54%)
Query: 244 WRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGLW 303
W +GEFQCYDKY+ A + G EW P A PE T FF+ D G +
Sbjct: 201 WVFPGIGEFQCYDKYLKKDFKEAAAKAGHPEWDL--PEDAGEYNDKPEETGFFKKD-GTY 257
Query: 304 NTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPSELTA 363
+ G FF+ WYS L+ HG++I EA IF G +VN +AKV GIHW Y SH +ELTA
Sbjct: 258 VSEKGKFFMTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELTA 317
Query: 364 GYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAARIC 423
GYYN RDG+ PIAR+ ++ L +C EM+D D S+P+ ++++L A
Sbjct: 318 GYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTA-EALSAPQELVQEVLSKAWKE 376
Query: 424 EIPLEGENSATSLDDAAFQQVIKMSKFYSEGLE---KPS---FSFNFLRMDKNMFEYHNW 477
I + GEN+ + + Q++ ++ G+ KP + F +LR+ +F+ +N+
Sbjct: 377 GIEVAGENALETYGAKGYNQILLNAR--PNGVNPNGKPKLRMYGFTYLRLSDTVFQENNF 434
Query: 478 VRFTRFVRQL 487
F + VR++
Sbjct: 435 ELFKKLVRKM 444
Score = 37 (18.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 425 IPLEGENSATSLDDAA 440
+PL+ NS +L+D A
Sbjct: 462 VPLKTSNSQLTLEDIA 477
>TAIR|locus:2127033 [details] [associations]
symbol:BAM2 "beta-amylase 2" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] InterPro:IPR001371 InterPro:IPR001554
InterPro:IPR013781 InterPro:IPR018238 Pfam:PF01373 PRINTS:PR00750
PRINTS:PR00842 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
EMBL:AF058919 EMBL:AL161472 HSSP:P16098 CAZy:GH14
HOGENOM:HOG000238755 KO:K01177 GO:GO:0016161 IPI:IPI00525144
PIR:T01213 RefSeq:NP_191958.3 UniGene:At.27432 UniGene:At.68473
ProteinModelPortal:O65258 SMR:O65258 PaxDb:O65258 PRIDE:O65258
EnsemblPlants:AT4G00490.1 GeneID:827959 KEGG:ath:AT4G00490
TAIR:At4g00490 eggNOG:NOG274372 InParanoid:O65258 OMA:RYPSYPA
ProtClustDB:CLSN2920283 Genevestigator:O65258 Uniprot:O65258
Length = 542
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 134/435 (30%), Positives = 221/435 (50%)
Query: 77 PVFVKLPEDSTMIGGKVKRRKAMAQSFKALXXXXXXXXXXXXXXXXXXRDRPGVYDWRGY 136
PV+V LP + +V + + + L P VY+W GY
Sbjct: 96 PVYVMLPLGVIDMNSEVVEPEELLDQLRTLKSVNVDGVMVDCWWGIVESHTPQVYNWSGY 155
Query: 137 FDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNM 196
L + GLK++ +++FH+CG GD + +P+WV E +PD+ ++D GRRN
Sbjct: 156 KKLFQMIRELGLKIQVVMSFHECGGNVGDDVHIQIPEWVREIGQSNPDIYFTDSAGRRNT 215
Query: 197 EYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGA-IITKL-MWSWRSRELGEFQC 254
E ++ G D VLRGR+ ++ Y D+MR+FR F II ++ + EL +
Sbjct: 216 ECLTWGIDKQRVLRGRTALEVYFDYMRSFRVEFDEFFEEKIIPEIEVGLGPCGEL-RYPS 274
Query: 255 YD-----KYMLASLNACAREIGMREWGDGGPI-GASNLMQDPEHTEFFRT---------D 299
Y KY C + M + + G S + P++TE + + D
Sbjct: 275 YPAQFGWKYPGIGEFQCYDKYLMNSLKEAAEVRGHSFWGRGPDNTETYNSTPHGTGFFRD 334
Query: 300 NGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWHYGTPSHPS 359
G +++ YG FFL WYS +L+ HG+R+ A F GT + +AK+ GIHW Y T SH +
Sbjct: 335 GGDYDSYYGRFFLNWYSRVLIDHGDRVLAMANLAFEGTCI--AAKLSGIHWWYKTASHAA 392
Query: 360 ELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNP--FSSPEGFLRQLL 417
ELTAG+YN+S RDG+ PIA +F ++ L +C E+R +D+ + P + PEG + Q+L
Sbjct: 393 ELTAGFYNSSNRDGYGPIAAMFKKHDAALNFTCVELRTLDQHEDFPEALADPEGLVWQVL 452
Query: 418 LAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSFSFNFLRMDKNMFEYHNW 477
AA IP+ EN+ D + ++++ +K ++ + F +LR++ + E N+
Sbjct: 453 NAAWDASIPVASENALPCYDREGYNKILENAKPLTDPDGRHLSCFTYLRLNPTLMESQNF 512
Query: 478 VRFTRFVRQLSGSSI 492
F RF++++ G ++
Sbjct: 513 KEFERFLKRMHGEAV 527
>TAIR|locus:2180029 [details] [associations]
symbol:BMY3 "beta-amylase 3" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS] [GO:0043169 "cation binding"
evidence=IEA] InterPro:IPR001554 InterPro:IPR013781 Pfam:PF01373
PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005737
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
EMBL:AC051627 CAZy:GH14 HOGENOM:HOG000238755 GO:GO:0016161
HSSP:P10537 EMBL:AF402598 EMBL:AY069879 EMBL:AY142007 EMBL:AY087036
IPI:IPI00528458 RefSeq:NP_197368.1 UniGene:At.19910
ProteinModelPortal:Q8VYW2 SMR:Q8VYW2 STRING:Q8VYW2 PaxDb:Q8VYW2
PRIDE:Q8VYW2 EnsemblPlants:AT5G18670.1 GeneID:831985
KEGG:ath:AT5G18670 TAIR:At5g18670 eggNOG:NOG304269
InParanoid:Q8VYW2 OMA:GNPLWGL PhylomeDB:Q8VYW2
ProtClustDB:CLSN2916428 Genevestigator:Q8VYW2 Uniprot:Q8VYW2
Length = 536
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 133/427 (31%), Positives = 210/427 (49%)
Query: 78 VFVKLPEDSTMIGGKVKRRKAMAQSFKALXXXXXXXXXXXXXXXXXXRDRPGVYDWRGYF 137
+FV LP D+ V KA+ KAL ++ G Y+W GY
Sbjct: 89 LFVGLPLDTVSDCNNVNHLKAITAGLKALKLLGVEGIELPIFWGVVEKEAAGKYEWSGYL 148
Query: 138 DLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAYSDRFGRRNME 197
+ + GLK+ A L+FH GS + + LP WV + D +P + ++DR+G++ +
Sbjct: 149 AVAEIVKKVGLKLHASLSFH--GSKQTE---IGLPDWVAKIGDAEPGIYFTDRYGQQYKD 203
Query: 198 YISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLLGAIITKLMWS--------WRSRE- 248
+S D +PVL G++P++ Y F +F+ F +G IT + + S +
Sbjct: 204 CLSFAVDDVPVLDGKTPMEVYRGFCESFKSAFADYMGNTITGITLGLGPDGELKYPSHQH 263
Query: 249 ------LGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQDPEHTEFFRTDNGL 302
GEFQCYDK+ML++L A G WG GGP A Q P + FF +D G
Sbjct: 264 NAKLSGAGEFQCYDKHMLSALKGYAESTGNPLWGLGGPHDAPAYDQQPNSSSFF-SDGGS 322
Query: 303 WNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIH-WHYGTPSHPSEL 361
W + YG+FFL WYS +L H +R+ A + F G V K+ +H WH SHPSEL
Sbjct: 323 WESQYGDFFLSWYSSLLTSHADRVLSVASSAFSGIGVPLCGKLPLLHQWHK-LRSHPSEL 381
Query: 362 TAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSSPEGFLRQLLLAAR 421
TAG+Y+++ +D + IA IF + + ++ D + + SSPE L + + +
Sbjct: 382 TAGFYSSNGQDRYEAIAEIFAKNSCRMIIPGMDLSD-EHQSPESLSSPESLLGHIKTSCK 440
Query: 422 ICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSFSFNFLRMDKNMFEYHNWVRFT 481
+ + G+NS+T + F+++++ K + G++ F + RM F ++ FT
Sbjct: 441 KQGVVVSGQNSSTPVP-GGFERIVENLKDENVGIDL----FTYQRMGALFFSPEHFHAFT 495
Query: 482 RFVRQLS 488
FVR LS
Sbjct: 496 VFVRNLS 502
>TAIR|locus:2158455 [details] [associations]
symbol:BMY2 "beta-amylase 2" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048831 "regulation of shoot system development"
evidence=IMP] InterPro:IPR001554 InterPro:IPR013781 Pfam:PF01373
PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679 GO:GO:0005634
GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043169
Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445 GO:GO:0000272
GO:GO:0003700 EMBL:AB020744 GO:GO:0048831 CAZy:GH14
HOGENOM:HOG000238755 GO:GO:0016161 InterPro:IPR008540 Pfam:PF05687
EMBL:AK117140 EMBL:BT006482 IPI:IPI00517397 IPI:IPI00656647
RefSeq:NP_001032014.1 RefSeq:NP_199343.1 UniGene:At.30019
HSSP:P10537 ProteinModelPortal:Q9FH80 SMR:Q9FH80 IntAct:Q9FH80
PaxDb:Q9FH80 PRIDE:Q9FH80 EnsemblPlants:AT5G45300.1 GeneID:834566
KEGG:ath:AT5G45300 TAIR:At5g45300 eggNOG:NOG242783
InParanoid:Q9FH80 OMA:MAFHEYG PhylomeDB:Q9FH80 ProtClustDB:PLN02705
Genevestigator:Q9FH80 Uniprot:Q9FH80
Length = 689
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 121/341 (35%), Positives = 173/341 (50%)
Query: 128 PGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKD-PDLA 186
P Y W GY +L L + LK++ ++AFH+ G + LPQWVL+ I KD PD+
Sbjct: 307 PQKYVWSGYRELFNLIRDFKLKLQVVMAFHEYGGNASGNVMISLPQWVLK-IGKDNPDIF 365
Query: 187 YSDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPL-LGAIIT------- 238
++DR GRR+ E ++ D VL GR+ I+ Y DFMR+FR F L + +IT
Sbjct: 366 FTDREGRRSFECLNWSIDKERVLHGRTGIEVYFDFMRSFRSEFDDLFVEGLITAVEIGLG 425
Query: 239 ---KLMW-------SWRSRELGEFQCYDKYMLASLNACAREIGMREWGDGGPIGASNLMQ 288
+L + W +GEFQCYDKY SL A+ G WG G P A
Sbjct: 426 ASGELKYPSFPERMGWIYPGIGEFQCYDKYSQLSLQKEAKSRGFTFWGKG-PENAGQYSS 484
Query: 289 DPEHTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGI 348
P T FF+ + G +++ YG FFL WYS +L+ H E + A F T++ K+ I
Sbjct: 485 HPHETVFFQ-ERGEYDSYYGRFFLNWYSQLLIGHAENVLSLANLAFEETKI--IVKIPAI 541
Query: 349 HWHYGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQMNPFSS 408
+W Y T SH +ELTAGYYN S RDG+ + +Y T+ C + +
Sbjct: 542 YWSYKTASHAAELTAGYYNPSNRDGYSLVFETLKKYSVTVKFVCPGPQMSPNAHEEALAD 601
Query: 409 PEGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSK 449
PEG Q++ AA + + GEN+ T D ++I ++K
Sbjct: 602 PEGLSWQVINAAWDKGLQIGGENAITCFDRDGCMRLIDIAK 642
>TAIR|locus:2050720 [details] [associations]
symbol:BAM7 "beta-amylase 7" species:3702 "Arabidopsis
thaliana" [GO:0000272 "polysaccharide catabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0016161 "beta-amylase
activity" evidence=IEA;ISS;IDA] [GO:0043169 "cation binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0048831 "regulation of shoot system development"
evidence=IMP] [GO:0010048 "vernalization response" evidence=RCA]
InterPro:IPR001554 InterPro:IPR013781 InterPro:IPR018238
Pfam:PF01373 PRINTS:PR00750 PROSITE:PS00506 PROSITE:PS00679
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043169 Gene3D:3.20.20.80 InterPro:IPR017853 SUPFAM:SSF51445
GO:GO:0000272 GO:GO:0003700 GO:GO:0048831 EMBL:AC004665 CAZy:GH14
HOGENOM:HOG000238755 GO:GO:0016161 eggNOG:NOG274372 HSSP:P10538
EMBL:AK227323 IPI:IPI00543929 PIR:T02459 RefSeq:NP_182112.2
UniGene:At.36579 ProteinModelPortal:O80831 SMR:O80831 PaxDb:O80831
PRIDE:O80831 EnsemblPlants:AT2G45880.1 GeneID:819196
KEGG:ath:AT2G45880 TAIR:At2g45880 InParanoid:Q0WU61 OMA:PVARENS
PhylomeDB:O80831 ProtClustDB:PLN02905 Genevestigator:O80831
InterPro:IPR008540 Pfam:PF05687 Uniprot:O80831
Length = 691
Score = 468 (169.8 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 124/383 (32%), Positives = 189/383 (49%)
Query: 128 PGVYDWRGYFDLIVLASNCGLKVRALLAFHQCGSGPGDPKWVPLPQWVLEEIDKDPDLAY 187
P Y+W GY L + + LK++ L++FH+CG GD +PLP WV E +PD+ +
Sbjct: 300 PQEYNWTGYRQLFQMVRDLNLKIQVLMSFHECGGNVGDDVCIPLPHWVAEIGRTNPDIYF 359
Query: 188 SDRFGRRNMEYISLGCDILPVLRGRSPIQAYTDFMRNFRDTFRPLL--GAIITKLMWSWR 245
+DR GRRN E +S G D +LRGR+ ++ Y D+MR+FR L G I +
Sbjct: 360 TDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRIELAEFLEDGVISMVEIGLGP 419
Query: 246 SRELGEFQCYDK----YMLASLNACAREI---GMREWGDG-GPI----GASNL--MQDPE 291
EL C K Y C + +R+ + G + G N
Sbjct: 420 CGELRYPSCPIKHGWRYPGVGEFQCYDKYLSKSLRKAAESRGHLFWARGPDNTGSYNSQP 479
Query: 292 HTEFFRTDNGLWNTAYGNFFLEWYSGMLLLHGERICREAETIFRGTRVNTSAKVGGIHWH 351
F D G ++ YG FFL+WYS +L+ H ++I A+ +F + + +AK+ +HW
Sbjct: 480 QGTGFFCDGGDYDGLYGRFFLKWYSQVLIDHADQILCLAKLVFDSSCI--AAKLPDVHWW 537
Query: 352 YGTPSHPSELTAGYYNTSTRDGFLPIARIFGRYGFTLCCSCFEMRDVDEKQ--MNPFSSP 409
Y T SH +ELTAG+YN S RDG+ IA ++G TL E++ ++ P
Sbjct: 538 YRTASHAAELTAGFYNPSNRDGYSAIASTLKKHGATLSFVSGEVQVLNRPDDFSGALGEP 597
Query: 410 EGFLRQLLLAARICEIPLEGENSATSLDDAAFQQVIKMSKFYSEGLEKPSFSFNFLRMDK 469
E Q+L AA P+ ENS D + ++++ KF ++ K SF + R+
Sbjct: 598 EAVAWQVLNAAWDSGTPVARENSLACHDRVGYNKMLESVKFRNDPDRKHLSSFAYSRLVP 657
Query: 470 NMFEYHNWVRFTRFVRQLSGSSI 492
+ E HN V F RFV++L G ++
Sbjct: 658 ALMEGHNIVEFERFVKKLHGEAV 680
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.446 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 521 488 0.00081 119 3 11 22 0.47 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 626 (67 KB)
Total size of DFA: 326 KB (2165 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.39u 0.16s 38.55t Elapsed: 00:00:02
Total cpu time: 38.39u 0.16s 38.55t Elapsed: 00:00:02
Start: Tue May 21 09:10:30 2013 End: Tue May 21 09:10:32 2013