Query 009982
Match_columns 521
No_of_seqs 224 out of 1482
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 17:16:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009982.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009982hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gq2_A Malic enzyme; oxidoredu 100.0 1E-190 4E-195 1513.7 39.3 470 50-521 1-471 (555)
2 1pj3_A NAD-dependent malic enz 100.0 5E-190 2E-194 1512.8 37.4 471 50-521 3-476 (564)
3 1o0s_A NAD-ME, NAD-dependent m 100.0 6E-190 2E-194 1516.5 36.2 474 46-521 33-508 (605)
4 3nv9_A Malic enzyme; rossmann 100.0 3E-111 1E-115 887.7 23.2 323 128-521 55-388 (487)
5 2a9f_A Putative malic enzyme ( 100.0 7E-106 2E-110 837.1 16.7 321 121-521 23-350 (398)
6 1vl6_A Malate oxidoreductase; 100.0 3E-102 1E-106 808.2 16.3 320 121-521 27-354 (388)
7 2dvm_A Malic enzyme, 439AA lon 100.0 7.2E-76 2.5E-80 619.6 18.1 322 121-521 21-357 (439)
8 3gvp_A Adenosylhomocysteinase 99.0 4.4E-09 1.5E-13 111.3 15.0 169 252-459 111-318 (435)
9 3h9u_A Adenosylhomocysteinase; 98.9 3.1E-09 1.1E-13 112.5 11.5 130 298-461 171-311 (436)
10 1x13_A NAD(P) transhydrogenase 98.5 4.4E-08 1.5E-12 101.9 3.9 218 166-448 26-294 (401)
11 3ond_A Adenosylhomocysteinase; 98.1 8.8E-06 3E-10 87.4 9.5 132 298-462 225-366 (488)
12 3n58_A Adenosylhomocysteinase; 98.0 2.4E-05 8.3E-10 83.4 11.5 138 298-469 207-369 (464)
13 1l7d_A Nicotinamide nucleotide 97.4 0.0005 1.7E-08 70.6 10.3 225 167-448 20-296 (384)
14 4dio_A NAD(P) transhydrogenase 97.4 0.00015 5.1E-09 76.2 6.3 110 328-455 187-322 (405)
15 3p2y_A Alanine dehydrogenase/p 97.2 0.00041 1.4E-08 72.4 7.2 102 329-448 182-304 (381)
16 3aoe_E Glutamate dehydrogenase 97.0 0.0071 2.4E-07 63.9 13.7 186 253-461 123-332 (419)
17 3k92_A NAD-GDH, NAD-specific g 97.0 0.012 4.2E-07 62.2 15.1 178 253-449 126-329 (424)
18 4fcc_A Glutamate dehydrogenase 96.9 0.054 1.8E-06 57.8 19.6 183 252-449 140-354 (450)
19 3d4o_A Dipicolinate synthase s 96.8 0.0086 2.9E-07 58.9 11.4 123 309-460 133-256 (293)
20 1a4i_A Methylenetetrahydrofola 96.5 0.0049 1.7E-07 62.6 7.6 96 309-448 143-239 (301)
21 3aog_A Glutamate dehydrogenase 96.5 0.036 1.2E-06 58.9 14.5 188 253-461 140-353 (440)
22 3r3j_A Glutamate dehydrogenase 96.5 0.13 4.5E-06 54.9 18.8 190 253-461 145-368 (456)
23 3l07_A Bifunctional protein fo 96.4 0.0072 2.5E-07 60.9 8.0 92 311-446 141-233 (285)
24 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.047 1.6E-06 57.6 13.0 176 254-449 117-326 (421)
25 3p2o_A Bifunctional protein fo 96.1 0.012 4E-07 59.4 8.1 96 310-449 139-236 (285)
26 2bma_A Glutamate dehydrogenase 96.1 0.078 2.7E-06 56.9 14.8 179 254-449 159-372 (470)
27 3ngx_A Bifunctional protein fo 96.1 0.011 3.8E-07 59.3 7.6 92 309-446 130-222 (276)
28 3pwz_A Shikimate dehydrogenase 96.0 0.011 3.7E-07 58.5 7.2 180 212-449 23-219 (272)
29 3jyo_A Quinate/shikimate dehyd 96.0 0.013 4.5E-07 58.2 7.7 88 315-422 111-205 (283)
30 1v9l_A Glutamate dehydrogenase 96.0 0.059 2E-06 56.9 13.1 177 254-449 116-325 (421)
31 1b0a_A Protein (fold bifunctio 96.0 0.011 3.6E-07 59.8 6.9 96 309-448 137-233 (288)
32 2tmg_A Protein (glutamate dehy 95.9 0.18 6.3E-06 53.1 16.5 177 254-449 115-319 (415)
33 1edz_A 5,10-methylenetetrahydr 95.9 0.0094 3.2E-07 60.9 6.1 113 313-449 150-278 (320)
34 4a5o_A Bifunctional protein fo 95.8 0.017 5.7E-07 58.3 7.7 95 311-449 141-237 (286)
35 4a26_A Putative C-1-tetrahydro 95.7 0.017 5.9E-07 58.6 7.3 96 307-446 141-239 (300)
36 3don_A Shikimate dehydrogenase 95.7 0.011 3.9E-07 58.7 5.8 111 315-449 101-214 (277)
37 3oj0_A Glutr, glutamyl-tRNA re 95.3 0.0071 2.4E-07 52.8 2.6 109 309-449 4-113 (144)
38 3tnl_A Shikimate dehydrogenase 95.3 0.022 7.6E-07 57.7 6.6 91 315-422 138-237 (315)
39 1c1d_A L-phenylalanine dehydro 95.3 0.069 2.3E-06 55.2 10.3 166 256-453 93-269 (355)
40 1v8b_A Adenosylhomocysteinase; 95.3 0.062 2.1E-06 57.6 10.2 123 306-461 235-357 (479)
41 1gpj_A Glutamyl-tRNA reductase 95.3 0.1 3.5E-06 53.8 11.5 102 328-449 164-269 (404)
42 3t4e_A Quinate/shikimate dehyd 95.3 0.025 8.7E-07 57.2 6.7 90 316-422 133-231 (312)
43 2c2x_A Methylenetetrahydrofola 95.1 0.035 1.2E-06 55.9 7.1 99 309-449 136-235 (281)
44 2v6b_A L-LDH, L-lactate dehydr 95.1 0.0077 2.6E-07 59.9 2.3 124 333-473 2-140 (304)
45 1bgv_A Glutamate dehydrogenase 95.1 0.48 1.7E-05 50.5 16.0 178 255-449 137-350 (449)
46 2rir_A Dipicolinate synthase, 94.9 0.081 2.8E-06 52.1 9.0 111 322-460 148-258 (300)
47 2egg_A AROE, shikimate 5-dehyd 94.9 0.026 9E-07 56.1 5.4 87 316-422 125-215 (297)
48 3u62_A Shikimate dehydrogenase 94.8 0.044 1.5E-06 53.6 6.7 145 262-447 42-201 (253)
49 3d64_A Adenosylhomocysteinase; 94.4 0.072 2.5E-06 57.3 7.7 100 322-449 268-367 (494)
50 1hyh_A L-hicdh, L-2-hydroxyiso 94.2 0.059 2E-06 53.2 6.2 102 332-450 2-126 (309)
51 1leh_A Leucine dehydrogenase; 94.2 0.096 3.3E-06 54.1 8.0 159 259-449 93-264 (364)
52 2o4c_A Erythronate-4-phosphate 94.2 0.34 1.2E-05 50.4 12.0 117 299-447 81-208 (380)
53 1mld_A Malate dehydrogenase; o 94.0 0.085 2.9E-06 52.9 7.0 101 333-449 2-120 (314)
54 3mw9_A GDH 1, glutamate dehydr 94.0 0.26 8.7E-06 53.3 11.0 179 253-449 136-352 (501)
55 3tri_A Pyrroline-5-carboxylate 93.9 0.12 4E-06 50.7 7.5 121 331-480 3-127 (280)
56 1pzg_A LDH, lactate dehydrogen 93.9 0.088 3E-06 53.1 6.8 124 332-472 10-157 (331)
57 2hk9_A Shikimate dehydrogenase 93.8 0.15 5E-06 49.7 8.1 107 316-447 114-222 (275)
58 3u95_A Glycoside hydrolase, fa 93.7 0.096 3.3E-06 55.8 7.1 23 427-449 140-162 (477)
59 1pjc_A Protein (L-alanine dehy 93.5 0.11 3.8E-06 52.7 6.9 96 329-448 165-269 (361)
60 3o8q_A Shikimate 5-dehydrogena 93.5 0.1 3.6E-06 51.7 6.5 120 212-375 29-159 (281)
61 3fbt_A Chorismate mutase and s 93.5 0.099 3.4E-06 52.2 6.2 104 316-449 107-218 (282)
62 2eez_A Alanine dehydrogenase; 93.4 0.15 5.2E-06 51.8 7.7 97 328-448 163-268 (369)
63 2g1u_A Hypothetical protein TM 93.3 0.13 4.5E-06 45.2 6.1 102 327-447 15-119 (155)
64 3oet_A Erythronate-4-phosphate 93.3 0.51 1.7E-05 49.2 11.4 119 298-448 83-212 (381)
65 1oju_A MDH, malate dehydrogena 93.1 0.058 2E-06 54.0 4.0 124 333-472 2-143 (294)
66 2ekl_A D-3-phosphoglycerate de 93.1 0.85 2.9E-05 45.6 12.4 121 298-447 90-233 (313)
67 1b8p_A Protein (malate dehydro 93.1 0.044 1.5E-06 55.1 3.0 111 332-449 6-136 (329)
68 2i6t_A Ubiquitin-conjugating e 93.1 0.19 6.5E-06 50.3 7.6 121 332-473 15-151 (303)
69 1ldn_A L-lactate dehydrogenase 93.0 0.055 1.9E-06 54.1 3.5 126 332-473 7-149 (316)
70 2ewd_A Lactate dehydrogenase,; 93.0 0.09 3.1E-06 52.2 5.0 100 332-450 5-125 (317)
71 3ce6_A Adenosylhomocysteinase; 92.8 0.71 2.4E-05 49.6 11.9 108 323-461 266-374 (494)
72 1gtm_A Glutamate dehydrogenase 92.8 0.91 3.1E-05 47.7 12.5 114 254-379 115-250 (419)
73 3dtt_A NADP oxidoreductase; st 92.7 0.23 8E-06 47.2 7.4 109 325-449 13-127 (245)
74 1o6z_A MDH, malate dehydrogena 92.7 0.062 2.1E-06 53.5 3.4 125 333-473 2-145 (303)
75 2hjr_A Malate dehydrogenase; m 92.6 0.091 3.1E-06 53.0 4.6 128 332-476 15-160 (328)
76 2d5c_A AROE, shikimate 5-dehyd 92.6 0.2 6.9E-06 48.1 6.8 104 316-447 102-207 (263)
77 3tum_A Shikimate dehydrogenase 92.6 0.19 6.4E-06 49.8 6.7 48 316-374 110-157 (269)
78 2zqz_A L-LDH, L-lactate dehydr 92.5 0.11 3.8E-06 52.5 5.1 126 332-473 10-151 (326)
79 1t2d_A LDH-P, L-lactate dehydr 92.4 0.13 4.3E-06 51.8 5.3 124 332-476 5-155 (322)
80 1zud_1 Adenylyltransferase THI 92.3 0.13 4.6E-06 49.7 5.2 102 328-445 25-150 (251)
81 3d0o_A L-LDH 1, L-lactate dehy 92.3 0.1 3.6E-06 52.2 4.6 128 330-473 5-149 (317)
82 1ez4_A Lactate dehydrogenase; 92.3 0.14 4.7E-06 51.6 5.3 126 332-473 6-147 (318)
83 3hdj_A Probable ornithine cycl 92.2 0.52 1.8E-05 47.4 9.5 113 319-459 111-227 (313)
84 3fef_A Putative glucosidase LP 92.2 0.14 4.7E-06 54.5 5.5 106 329-449 3-149 (450)
85 2hmt_A YUAA protein; RCK, KTN, 92.1 0.08 2.7E-06 44.5 3.0 103 329-449 4-108 (144)
86 2gcg_A Glyoxylate reductase/hy 92.1 1.2 4E-05 44.7 11.9 122 298-447 98-247 (330)
87 1a5z_A L-lactate dehydrogenase 91.9 0.22 7.5E-06 49.7 6.3 101 333-450 2-120 (319)
88 1y6j_A L-lactate dehydrogenase 91.9 0.2 6.9E-06 50.2 6.0 122 332-473 8-149 (318)
89 2dbq_A Glyoxylate reductase; D 91.8 1.9 6.5E-05 43.3 13.2 93 326-447 145-241 (334)
90 2rcy_A Pyrroline carboxylate r 91.8 0.8 2.7E-05 43.1 9.8 92 331-450 4-95 (262)
91 4e12_A Diketoreductase; oxidor 91.8 0.048 1.6E-06 53.1 1.3 32 332-375 5-36 (283)
92 1obb_A Maltase, alpha-glucosid 91.7 0.13 4.3E-06 55.2 4.6 124 331-472 3-174 (480)
93 1nyt_A Shikimate 5-dehydrogena 91.6 0.29 1E-05 47.5 6.7 49 315-375 103-151 (271)
94 3vku_A L-LDH, L-lactate dehydr 91.6 0.2 6.8E-06 51.0 5.6 127 331-473 9-151 (326)
95 1s6y_A 6-phospho-beta-glucosid 91.5 0.061 2.1E-06 57.0 1.8 127 332-472 8-175 (450)
96 1p77_A Shikimate 5-dehydrogena 91.2 0.25 8.4E-06 48.2 5.7 49 315-375 103-151 (272)
97 1x7d_A Ornithine cyclodeaminas 91.0 0.31 1.1E-05 49.7 6.5 115 316-458 116-239 (350)
98 1u8x_X Maltose-6'-phosphate gl 91.0 0.086 2.9E-06 56.2 2.4 126 331-472 28-194 (472)
99 3d1l_A Putative NADP oxidoredu 90.9 0.23 7.7E-06 47.3 5.0 99 327-449 6-105 (266)
100 2vhw_A Alanine dehydrogenase; 90.8 0.25 8.4E-06 50.6 5.5 96 328-447 165-269 (377)
101 1up7_A 6-phospho-beta-glucosid 90.8 0.21 7.2E-06 52.4 5.1 124 332-472 3-164 (417)
102 2xxj_A L-LDH, L-lactate dehydr 90.8 0.13 4.4E-06 51.5 3.3 126 332-473 1-142 (310)
103 3h5n_A MCCB protein; ubiquitin 90.8 0.61 2.1E-05 47.5 8.4 101 327-444 114-240 (353)
104 4g2n_A D-isomer specific 2-hyd 90.7 1.6 5.6E-05 44.6 11.5 122 298-448 116-265 (345)
105 3ba1_A HPPR, hydroxyphenylpyru 90.6 1.3 4.5E-05 44.8 10.6 91 326-448 159-253 (333)
106 1ur5_A Malate dehydrogenase; o 90.6 0.21 7.1E-06 49.8 4.6 125 332-473 3-145 (309)
107 1lu9_A Methylene tetrahydromet 90.6 1.1 3.7E-05 43.5 9.6 81 281-375 64-152 (287)
108 3kkj_A Amine oxidase, flavin-c 90.4 0.24 8.1E-06 42.9 4.2 31 333-375 4-34 (336)
109 1guz_A Malate dehydrogenase; o 90.2 0.3 1E-05 48.5 5.4 100 333-449 2-121 (310)
110 1lld_A L-lactate dehydrogenase 90.1 0.23 7.8E-06 48.6 4.4 105 331-450 7-128 (319)
111 1smk_A Malate dehydrogenase, g 90.0 0.12 4.2E-06 51.9 2.4 104 332-449 9-128 (326)
112 1wwk_A Phosphoglycerate dehydr 90.0 1.6 5.5E-05 43.5 10.5 109 310-447 103-233 (307)
113 1xdw_A NAD+-dependent (R)-2-hy 90.0 2.3 7.9E-05 42.8 11.7 119 298-447 91-235 (331)
114 2dpo_A L-gulonate 3-dehydrogen 89.9 0.12 4E-06 52.2 2.2 33 331-375 6-38 (319)
115 3nep_X Malate dehydrogenase; h 89.9 0.21 7.3E-06 50.4 4.0 124 333-472 2-143 (314)
116 2i99_A MU-crystallin homolog; 89.8 0.94 3.2E-05 44.9 8.6 113 316-456 122-237 (312)
117 3gvi_A Malate dehydrogenase; N 89.8 0.27 9.2E-06 49.8 4.7 126 329-472 5-149 (324)
118 1qp8_A Formate dehydrogenase; 89.7 3.3 0.00011 41.2 12.5 117 298-447 71-211 (303)
119 1nvt_A Shikimate 5'-dehydrogen 89.7 0.27 9.2E-06 48.1 4.5 49 314-375 111-159 (287)
120 3p7m_A Malate dehydrogenase; p 89.6 0.24 8.1E-06 50.1 4.1 126 330-472 4-147 (321)
121 3jtm_A Formate dehydrogenase, 89.6 2.2 7.4E-05 43.7 11.3 175 298-503 108-310 (351)
122 1z82_A Glycerol-3-phosphate de 89.6 0.38 1.3E-05 47.7 5.5 98 331-451 14-116 (335)
123 3k5p_A D-3-phosphoglycerate de 89.5 3.8 0.00013 43.1 13.3 122 297-449 101-247 (416)
124 3i83_A 2-dehydropantoate 2-red 89.3 0.58 2E-05 46.2 6.6 98 332-450 3-109 (320)
125 1omo_A Alanine dehydrogenase; 89.3 1.2 4E-05 44.6 8.9 112 316-457 112-229 (322)
126 4huj_A Uncharacterized protein 89.3 0.41 1.4E-05 44.8 5.2 93 332-450 24-117 (220)
127 2raf_A Putative dinucleotide-b 89.3 0.87 3E-05 42.3 7.5 37 327-375 15-51 (209)
128 3h8v_A Ubiquitin-like modifier 89.2 0.4 1.4E-05 48.2 5.4 39 327-376 32-70 (292)
129 3ado_A Lambda-crystallin; L-gu 89.2 0.44 1.5E-05 48.3 5.8 32 331-374 6-37 (319)
130 3pqe_A L-LDH, L-lactate dehydr 89.2 0.24 8.1E-06 50.3 3.8 128 331-474 5-149 (326)
131 2cuk_A Glycerate dehydrogenase 89.2 2.6 8.9E-05 42.1 11.3 117 298-448 87-231 (311)
132 3tl2_A Malate dehydrogenase; c 88.9 0.34 1.2E-05 48.8 4.7 127 329-472 6-152 (315)
133 2d4a_B Malate dehydrogenase; a 88.8 0.29 9.9E-06 48.9 4.1 119 333-473 1-142 (308)
134 2j6i_A Formate dehydrogenase; 88.7 1.8 6.2E-05 44.3 10.0 144 279-448 88-259 (364)
135 2zyd_A 6-phosphogluconate dehy 88.6 0.84 2.9E-05 48.4 7.7 101 329-449 13-116 (480)
136 3rui_A Ubiquitin-like modifier 88.5 0.28 9.6E-06 50.4 3.8 38 328-376 31-68 (340)
137 1sc6_A PGDH, D-3-phosphoglycer 88.5 5.6 0.00019 41.4 13.6 119 298-447 91-234 (404)
138 4dgs_A Dehydrogenase; structur 88.4 2.8 9.6E-05 42.7 11.1 104 326-461 166-273 (340)
139 1hye_A L-lactate/malate dehydr 88.3 0.55 1.9E-05 46.7 5.7 125 333-474 2-149 (313)
140 3abi_A Putative uncharacterize 88.3 0.34 1.1E-05 48.9 4.2 116 333-478 18-137 (365)
141 3gt0_A Pyrroline-5-carboxylate 88.3 0.87 3E-05 43.0 6.8 98 332-450 3-101 (247)
142 1x0v_A GPD-C, GPDH-C, glycerol 88.3 0.96 3.3E-05 44.6 7.4 111 331-450 8-128 (354)
143 4fgw_A Glycerol-3-phosphate de 88.1 0.56 1.9E-05 49.0 5.9 97 332-437 35-141 (391)
144 1hdo_A Biliverdin IX beta redu 87.8 1.6 5.3E-05 38.6 7.8 97 332-446 4-111 (206)
145 1txg_A Glycerol-3-phosphate de 87.7 1.3 4.4E-05 43.1 7.8 100 333-449 2-107 (335)
146 1jw9_B Molybdopterin biosynthe 87.7 0.39 1.3E-05 46.3 4.0 38 328-376 28-65 (249)
147 2ph5_A Homospermidine synthase 87.6 3.2 0.00011 44.6 11.4 99 330-447 12-115 (480)
148 2d0i_A Dehydrogenase; structur 87.6 3.1 0.0001 41.9 10.7 91 327-447 142-236 (333)
149 1dxy_A D-2-hydroxyisocaproate 87.5 4.2 0.00014 41.0 11.6 120 298-448 90-235 (333)
150 1yj8_A Glycerol-3-phosphate de 87.4 0.75 2.6E-05 46.3 6.1 110 332-450 22-145 (375)
151 3hg7_A D-isomer specific 2-hyd 87.4 1.3 4.6E-05 44.8 8.0 121 299-448 89-232 (324)
152 1y7t_A Malate dehydrogenase; N 87.4 0.43 1.5E-05 47.3 4.3 110 332-449 5-133 (327)
153 3k96_A Glycerol-3-phosphate de 87.2 0.64 2.2E-05 47.4 5.5 102 331-450 29-137 (356)
154 1j4a_A D-LDH, D-lactate dehydr 87.2 6.5 0.00022 39.5 12.9 123 297-449 91-238 (333)
155 2yq5_A D-isomer specific 2-hyd 87.2 6.3 0.00022 40.2 12.8 121 298-449 92-239 (343)
156 4e21_A 6-phosphogluconate dehy 87.1 1.8 6.2E-05 44.1 8.8 95 329-448 20-117 (358)
157 3evt_A Phosphoglycerate dehydr 87.1 2.1 7.2E-05 43.3 9.2 123 298-449 83-230 (324)
158 4hy3_A Phosphoglycerate oxidor 87.1 2 6.8E-05 44.3 9.2 95 326-449 171-269 (365)
159 3k6j_A Protein F01G10.3, confi 86.8 0.75 2.5E-05 49.0 6.0 32 332-375 55-86 (460)
160 1npy_A Hypothetical shikimate 86.8 0.76 2.6E-05 45.2 5.6 48 316-375 105-152 (271)
161 4gsl_A Ubiquitin-like modifier 86.6 0.58 2E-05 51.7 5.1 38 328-376 323-360 (615)
162 1ks9_A KPA reductase;, 2-dehyd 86.5 1.1 3.9E-05 42.3 6.5 95 333-449 2-100 (291)
163 3c85_A Putative glutathione-re 86.3 0.25 8.6E-06 44.3 1.7 102 328-447 36-140 (183)
164 3gvx_A Glycerate dehydrogenase 86.2 4.3 0.00015 40.4 10.8 90 327-448 118-211 (290)
165 1hyu_A AHPF, alkyl hydroperoxi 86.2 0.56 1.9E-05 49.6 4.6 99 262-375 135-244 (521)
166 2x0j_A Malate dehydrogenase; o 86.1 0.98 3.3E-05 45.3 6.0 104 333-449 2-121 (294)
167 3b1f_A Putative prephenate deh 86.1 1.1 3.8E-05 43.0 6.3 96 331-448 6-103 (290)
168 1f0y_A HCDH, L-3-hydroxyacyl-C 85.9 0.79 2.7E-05 44.7 5.2 32 332-375 16-47 (302)
169 2pi1_A D-lactate dehydrogenase 85.8 4.4 0.00015 41.0 10.8 121 299-449 87-233 (334)
170 2p4q_A 6-phosphogluconate dehy 85.4 1.9 6.6E-05 45.9 8.3 98 332-449 11-112 (497)
171 3ic5_A Putative saccharopine d 85.3 0.44 1.5E-05 38.6 2.6 87 331-436 5-92 (118)
172 4ina_A Saccharopine dehydrogen 85.1 1.1 3.6E-05 46.3 5.9 96 332-447 2-108 (405)
173 2w2k_A D-mandelate dehydrogena 85.1 6 0.00021 40.0 11.4 97 326-448 158-258 (348)
174 2nac_A NAD-dependent formate d 84.9 3.8 0.00013 42.6 10.0 95 326-447 186-284 (393)
175 2qrj_A Saccharopine dehydrogen 84.9 3.3 0.00011 43.4 9.5 82 331-446 214-300 (394)
176 1lss_A TRK system potassium up 84.7 1 3.5E-05 37.5 4.7 97 331-449 4-106 (140)
177 2ew2_A 2-dehydropantoate 2-red 84.6 0.48 1.7E-05 45.3 2.9 101 332-450 4-112 (316)
178 2z2v_A Hypothetical protein PH 84.6 0.66 2.3E-05 47.4 4.1 120 330-478 15-137 (365)
179 4aj2_A L-lactate dehydrogenase 84.5 0.51 1.7E-05 48.0 3.2 130 328-474 16-163 (331)
180 1gdh_A D-glycerate dehydrogena 84.5 4.6 0.00016 40.4 10.1 122 298-447 89-239 (320)
181 3pp8_A Glyoxylate/hydroxypyruv 84.3 2.1 7.2E-05 43.1 7.5 123 298-449 86-232 (315)
182 1jay_A Coenzyme F420H2:NADP+ o 84.3 0.49 1.7E-05 43.2 2.7 94 333-450 2-101 (212)
183 3fi9_A Malate dehydrogenase; s 84.1 0.57 2E-05 47.9 3.4 107 329-449 6-129 (343)
184 3ldh_A Lactate dehydrogenase; 83.9 0.54 1.8E-05 48.0 3.0 124 331-472 21-163 (330)
185 1y8q_A Ubiquitin-like 1 activa 83.8 0.82 2.8E-05 46.5 4.4 38 327-375 32-69 (346)
186 2izz_A Pyrroline-5-carboxylate 83.7 1.8 6.2E-05 42.8 6.7 99 331-450 22-122 (322)
187 5mdh_A Malate dehydrogenase; o 83.5 0.53 1.8E-05 47.8 2.8 131 332-473 4-155 (333)
188 3e8x_A Putative NAD-dependent 83.4 2.5 8.6E-05 38.8 7.1 101 327-447 17-132 (236)
189 3vh1_A Ubiquitin-like modifier 83.3 0.61 2.1E-05 51.4 3.3 38 327-375 323-360 (598)
190 4egb_A DTDP-glucose 4,6-dehydr 83.3 3.5 0.00012 39.9 8.4 106 329-446 22-149 (346)
191 3gg9_A D-3-phosphoglycerate de 82.9 4.3 0.00015 41.4 9.3 108 326-461 155-266 (352)
192 3lk7_A UDP-N-acetylmuramoylala 82.8 1.4 4.8E-05 45.8 5.7 120 328-485 6-125 (451)
193 1id1_A Putative potassium chan 82.5 1 3.5E-05 39.2 3.9 34 330-375 2-35 (153)
194 2vns_A Metalloreductase steap3 82.3 1.1 3.7E-05 41.8 4.2 93 330-450 27-119 (215)
195 2g76_A 3-PGDH, D-3-phosphoglyc 82.3 5.8 0.0002 40.2 9.9 120 299-448 112-257 (335)
196 1bg6_A N-(1-D-carboxylethyl)-L 82.1 1.4 4.8E-05 43.2 5.1 93 332-447 5-110 (359)
197 2uyy_A N-PAC protein; long-cha 82.1 1.8 6.2E-05 42.1 5.9 91 332-447 31-125 (316)
198 3vrd_B FCCB subunit, flavocyto 81.9 1.5 5E-05 43.7 5.3 35 331-375 2-36 (401)
199 3gpi_A NAD-dependent epimerase 81.8 1.3 4.5E-05 41.8 4.7 96 331-446 3-109 (286)
200 3phh_A Shikimate dehydrogenase 81.7 1.1 3.7E-05 44.4 4.2 100 316-448 107-212 (269)
201 4dll_A 2-hydroxy-3-oxopropiona 81.4 1.2 4.1E-05 44.1 4.3 34 330-375 30-63 (320)
202 3l6d_A Putative oxidoreductase 81.3 1.6 5.4E-05 42.9 5.2 94 328-447 6-102 (306)
203 1pgj_A 6PGDH, 6-PGDH, 6-phosph 81.2 2.2 7.7E-05 45.0 6.6 97 333-449 3-106 (478)
204 3r6d_A NAD-dependent epimerase 81.1 1.2 4E-05 40.6 3.9 96 332-446 6-108 (221)
205 3c24_A Putative oxidoreductase 81.0 2.4 8.1E-05 40.8 6.3 91 332-449 12-104 (286)
206 1mx3_A CTBP1, C-terminal bindi 80.8 7.6 0.00026 39.5 10.2 169 298-501 107-312 (347)
207 3qsg_A NAD-binding phosphogluc 80.8 6.2 0.00021 38.8 9.3 33 332-375 25-57 (312)
208 3ghy_A Ketopantoate reductase 80.7 1.6 5.6E-05 43.2 5.1 102 331-449 3-107 (335)
209 2h78_A Hibadh, 3-hydroxyisobut 80.6 1.4 4.8E-05 42.6 4.5 32 332-375 4-35 (302)
210 4e5n_A Thermostable phosphite 80.5 4 0.00014 41.2 7.9 124 298-449 89-239 (330)
211 2iz1_A 6-phosphogluconate dehy 80.5 3.3 0.00011 43.5 7.6 99 331-449 5-106 (474)
212 3pef_A 6-phosphogluconate dehy 80.5 1.8 6.2E-05 41.7 5.2 32 332-375 2-33 (287)
213 4ezb_A Uncharacterized conserv 80.2 2.2 7.4E-05 42.4 5.8 33 332-375 25-57 (317)
214 3ggo_A Prephenate dehydrogenas 80.0 4.6 0.00016 40.1 8.1 93 332-446 34-128 (314)
215 4hb9_A Similarities with proba 79.9 1.5 5E-05 42.8 4.4 32 332-375 2-33 (412)
216 2g5c_A Prephenate dehydrogenas 79.9 3.9 0.00013 39.0 7.3 96 332-449 2-99 (281)
217 3dhn_A NAD-dependent epimerase 79.7 2.5 8.7E-05 38.2 5.7 97 332-446 5-112 (227)
218 4gwg_A 6-phosphogluconate dehy 79.5 3.7 0.00013 43.8 7.7 98 332-449 5-106 (484)
219 3hhp_A Malate dehydrogenase; M 79.5 2.2 7.5E-05 42.9 5.6 103 333-449 2-121 (312)
220 3i6i_A Putative leucoanthocyan 79.4 0.92 3.2E-05 44.3 2.8 101 328-443 7-117 (346)
221 2q1w_A Putative nucleotide sug 79.0 6.1 0.00021 38.2 8.5 104 328-446 18-137 (333)
222 3pdu_A 3-hydroxyisobutyrate de 78.5 2.4 8.1E-05 40.9 5.3 32 332-375 2-33 (287)
223 1tt5_B Ubiquitin-activating en 78.1 1.4 4.7E-05 46.5 3.8 38 327-375 36-73 (434)
224 1yb4_A Tartronic semialdehyde 77.7 2.9 9.8E-05 39.9 5.6 30 332-373 4-33 (295)
225 3cky_A 2-hydroxymethyl glutara 77.7 1.8 6.1E-05 41.6 4.2 92 332-449 5-101 (301)
226 2pzm_A Putative nucleotide sug 77.6 4.6 0.00016 39.1 7.1 103 327-446 16-136 (330)
227 4id9_A Short-chain dehydrogena 77.5 5.2 0.00018 38.6 7.5 97 327-446 15-126 (347)
228 4a9w_A Monooxygenase; baeyer-v 77.3 1.8 6.3E-05 41.2 4.1 34 331-376 3-36 (357)
229 3d1c_A Flavin-containing putat 77.3 2 6.7E-05 41.7 4.4 35 331-376 4-38 (369)
230 3fwz_A Inner membrane protein 77.1 1.3 4.4E-05 38.3 2.7 32 332-375 8-39 (140)
231 2pgd_A 6-phosphogluconate dehy 77.1 4.1 0.00014 42.9 7.0 98 332-449 3-104 (482)
232 3ip1_A Alcohol dehydrogenase, 76.8 9.3 0.00032 38.7 9.4 83 328-433 211-304 (404)
233 3doj_A AT3G25530, dehydrogenas 76.8 4 0.00014 40.0 6.5 36 328-375 18-53 (310)
234 4b4u_A Bifunctional protein fo 76.8 6.1 0.00021 40.2 7.9 92 310-445 158-250 (303)
235 1y8q_B Anthracycline-, ubiquit 76.7 1.7 5.8E-05 48.3 4.1 37 328-375 14-50 (640)
236 3l4b_C TRKA K+ channel protien 76.4 1.2 4.2E-05 41.0 2.5 95 333-447 2-100 (218)
237 2bka_A CC3, TAT-interacting pr 76.4 7.6 0.00026 35.4 7.9 102 329-446 16-132 (242)
238 3oz2_A Digeranylgeranylglycero 76.4 2.1 7.1E-05 41.3 4.2 31 333-375 6-36 (397)
239 2pv7_A T-protein [includes: ch 76.1 6.7 0.00023 38.2 7.9 32 332-375 22-54 (298)
240 3hn2_A 2-dehydropantoate 2-red 75.8 2.2 7.4E-05 41.9 4.3 101 332-450 3-107 (312)
241 3fbs_A Oxidoreductase; structu 75.2 2.6 8.7E-05 39.2 4.4 32 332-375 3-34 (297)
242 2f1k_A Prephenate dehydrogenas 75.1 5.2 0.00018 37.9 6.7 31 333-375 2-32 (279)
243 3f8d_A Thioredoxin reductase ( 75.0 2.7 9.2E-05 39.5 4.5 33 331-375 15-47 (323)
244 1vpd_A Tartronate semialdehyde 74.8 2 6.7E-05 41.3 3.6 32 332-375 6-37 (299)
245 1yqd_A Sinapyl alcohol dehydro 74.4 8.4 0.00029 38.5 8.2 121 315-460 172-296 (366)
246 3lzw_A Ferredoxin--NADP reduct 74.4 2.7 9.4E-05 39.7 4.4 34 331-376 7-40 (332)
247 3slg_A PBGP3 protein; structur 74.2 13 0.00045 36.2 9.4 101 328-446 21-141 (372)
248 3m2p_A UDP-N-acetylglucosamine 74.1 8.8 0.0003 36.5 8.0 93 332-446 3-109 (311)
249 3kb6_A D-lactate dehydrogenase 74.1 17 0.00057 36.8 10.4 109 326-468 136-250 (334)
250 3alj_A 2-methyl-3-hydroxypyrid 74.0 2.8 9.6E-05 41.4 4.6 38 328-377 8-45 (379)
251 1i36_A Conserved hypothetical 74.0 5.3 0.00018 37.6 6.3 30 333-374 2-31 (264)
252 2cvz_A Dehydrogenase, 3-hydrox 73.9 2.9 9.8E-05 39.7 4.5 30 333-375 3-32 (289)
253 2x5o_A UDP-N-acetylmuramoylala 73.9 13 0.00044 38.3 9.7 114 329-484 3-116 (439)
254 3fg2_P Putative rubredoxin red 73.6 2.8 9.6E-05 42.2 4.5 35 332-376 2-36 (404)
255 2zbw_A Thioredoxin reductase; 73.5 2.9 9.9E-05 40.0 4.4 34 331-376 5-38 (335)
256 3ef6_A Toluene 1,2-dioxygenase 73.2 5.2 0.00018 40.4 6.4 37 332-378 3-39 (410)
257 2z1m_A GDP-D-mannose dehydrata 73.1 6.4 0.00022 37.5 6.7 103 330-446 2-127 (345)
258 3hwr_A 2-dehydropantoate 2-red 72.7 2.4 8.2E-05 41.8 3.7 98 328-450 16-124 (318)
259 3qha_A Putative oxidoreductase 72.6 3.1 0.0001 40.6 4.4 32 332-375 16-47 (296)
260 3itj_A Thioredoxin reductase 1 72.4 2.5 8.7E-05 40.1 3.7 33 331-375 22-54 (338)
261 3lxd_A FAD-dependent pyridine 72.3 3.3 0.00011 41.7 4.7 38 330-377 8-45 (415)
262 3ehe_A UDP-glucose 4-epimerase 71.9 12 0.00042 35.5 8.4 95 333-446 3-114 (313)
263 3o38_A Short chain dehydrogena 71.8 2.3 8E-05 39.9 3.3 36 328-375 19-56 (266)
264 3cgv_A Geranylgeranyl reductas 71.7 3 0.0001 40.7 4.1 35 330-376 3-37 (397)
265 1zej_A HBD-9, 3-hydroxyacyl-CO 71.6 3.3 0.00011 41.2 4.4 32 331-375 12-43 (293)
266 3ew7_A LMO0794 protein; Q8Y8U8 71.5 8.5 0.00029 34.2 6.8 91 333-446 2-103 (221)
267 3nrc_A Enoyl-[acyl-carrier-pro 71.5 5.9 0.0002 37.7 6.1 78 328-422 23-114 (280)
268 3uko_A Alcohol dehydrogenase c 71.5 6.4 0.00022 39.4 6.5 37 327-374 190-226 (378)
269 3rp8_A Flavoprotein monooxygen 71.4 3.6 0.00012 41.0 4.7 36 329-376 21-56 (407)
270 4b8w_A GDP-L-fucose synthase; 71.4 5.9 0.0002 37.0 5.9 92 328-446 3-113 (319)
271 3pdi_B Nitrogenase MOFE cofact 71.4 3.3 0.00011 43.6 4.6 88 327-442 309-397 (458)
272 3nix_A Flavoprotein/dehydrogen 71.4 4.6 0.00016 40.0 5.4 34 331-376 5-38 (421)
273 3hyw_A Sulfide-quinone reducta 71.3 2.6 9E-05 43.0 3.7 34 332-375 3-36 (430)
274 3h8l_A NADH oxidase; membrane 71.2 3.6 0.00012 41.2 4.6 36 332-376 2-37 (409)
275 3dme_A Conserved exported prot 71.1 3.7 0.00013 39.3 4.6 33 331-375 4-36 (369)
276 2q7v_A Thioredoxin reductase; 71.1 3.3 0.00011 39.6 4.2 33 331-375 8-40 (325)
277 3s2u_A UDP-N-acetylglucosamine 71.0 4.9 0.00017 40.1 5.6 40 404-447 85-124 (365)
278 3axb_A Putative oxidoreductase 70.9 4.1 0.00014 41.1 5.0 37 327-374 19-55 (448)
279 2xdo_A TETX2 protein; tetracyc 70.9 3.5 0.00012 41.1 4.5 36 329-376 24-59 (398)
280 1ryi_A Glycine oxidase; flavop 70.8 3.8 0.00013 40.0 4.6 35 331-377 17-51 (382)
281 2x3n_A Probable FAD-dependent 70.7 3.5 0.00012 40.9 4.4 34 331-376 6-39 (399)
282 2ywl_A Thioredoxin reductase r 70.7 4.1 0.00014 35.7 4.4 32 332-375 2-33 (180)
283 2yjz_A Metalloreductase steap4 73.4 0.87 3E-05 42.5 0.0 92 329-449 17-108 (201)
284 2vou_A 2,6-dihydroxypyridine h 70.6 4.1 0.00014 40.6 4.9 35 330-376 4-38 (397)
285 3e48_A Putative nucleoside-dip 70.5 7 0.00024 36.7 6.2 97 333-446 2-106 (289)
286 3cty_A Thioredoxin reductase; 70.4 3.8 0.00013 39.0 4.5 33 331-375 16-48 (319)
287 2jae_A L-amino acid oxidase; o 70.0 3.5 0.00012 42.1 4.3 42 324-377 4-45 (489)
288 3klj_A NAD(FAD)-dependent dehy 69.9 2.7 9.4E-05 42.6 3.5 36 331-378 9-44 (385)
289 1yvv_A Amine oxidase, flavin-c 69.9 3.6 0.00012 39.2 4.2 33 332-376 3-35 (336)
290 3c96_A Flavin-containing monoo 69.9 4.2 0.00014 40.7 4.8 35 331-376 4-38 (410)
291 3ab1_A Ferredoxin--NADP reduct 69.7 4.1 0.00014 39.7 4.6 34 331-376 14-47 (360)
292 2yy7_A L-threonine dehydrogena 69.5 4.7 0.00016 38.1 4.8 98 332-445 3-117 (312)
293 3k7m_X 6-hydroxy-L-nicotine ox 69.0 4.3 0.00015 40.4 4.7 32 333-376 3-34 (431)
294 1y56_B Sarcosine oxidase; dehy 68.9 4 0.00014 39.9 4.3 34 331-376 5-38 (382)
295 2gag_B Heterotetrameric sarcos 68.9 4.8 0.00017 39.4 4.9 35 331-376 21-56 (405)
296 2c20_A UDP-glucose 4-epimerase 68.8 10 0.00035 36.2 7.1 98 333-446 3-118 (330)
297 3r9u_A Thioredoxin reductase; 68.7 4 0.00014 38.2 4.1 33 331-375 4-37 (315)
298 2ahr_A Putative pyrroline carb 68.7 3.5 0.00012 38.8 3.8 32 332-375 4-35 (259)
299 1tt5_A APPBP1, amyloid protein 68.5 2.5 8.6E-05 45.6 3.0 38 327-375 28-65 (531)
300 1ygy_A PGDH, D-3-phosphoglycer 68.5 16 0.00055 39.0 9.2 120 298-446 88-232 (529)
301 2gf3_A MSOX, monomeric sarcosi 68.4 4.3 0.00015 39.5 4.4 35 332-378 4-38 (389)
302 1e6u_A GDP-fucose synthetase; 68.2 6 0.0002 37.6 5.3 87 331-446 3-107 (321)
303 3llv_A Exopolyphosphatase-rela 67.9 4.9 0.00017 34.1 4.2 34 330-375 5-38 (141)
304 2q1s_A Putative nucleotide sug 67.8 9.2 0.00032 37.7 6.7 103 328-446 29-151 (377)
305 2q0l_A TRXR, thioredoxin reduc 67.7 4.6 0.00016 38.2 4.3 33 332-375 2-34 (311)
306 2wm3_A NMRA-like family domain 67.6 2.5 8.7E-05 40.1 2.5 99 331-447 5-115 (299)
307 2uzz_A N-methyl-L-tryptophan o 67.6 4.4 0.00015 39.3 4.3 35 332-378 3-37 (372)
308 3vtz_A Glucose 1-dehydrogenase 67.4 13 0.00044 35.4 7.4 78 326-422 9-92 (269)
309 1k0i_A P-hydroxybenzoate hydro 67.4 5 0.00017 39.5 4.7 33 332-376 3-35 (394)
310 2p5y_A UDP-glucose 4-epimerase 67.3 10 0.00035 36.0 6.7 98 333-446 2-117 (311)
311 4eqs_A Coenzyme A disulfide re 67.2 4.2 0.00014 41.7 4.3 34 333-376 2-35 (437)
312 3ek2_A Enoyl-(acyl-carrier-pro 67.1 5.3 0.00018 37.2 4.6 38 326-375 9-49 (271)
313 2zcu_A Uncharacterized oxidore 67.1 4.2 0.00014 37.9 3.9 98 333-446 1-104 (286)
314 2oln_A NIKD protein; flavoprot 67.0 5.1 0.00018 39.5 4.7 35 332-378 5-39 (397)
315 1trb_A Thioredoxin reductase; 67.0 3.4 0.00011 39.2 3.2 34 330-375 4-37 (320)
316 2x4g_A Nucleoside-diphosphate- 67.0 13 0.00045 35.5 7.5 96 333-446 15-126 (342)
317 3dje_A Fructosyl amine: oxygen 66.7 5 0.00017 40.3 4.6 37 331-378 6-42 (438)
318 3qvo_A NMRA family protein; st 66.5 9 0.00031 35.3 6.0 101 329-446 21-125 (236)
319 2gqw_A Ferredoxin reductase; f 66.5 6.1 0.00021 39.9 5.2 38 331-378 7-44 (408)
320 1c0p_A D-amino acid oxidase; a 66.4 5.9 0.0002 38.6 5.0 34 331-376 6-39 (363)
321 2vdc_G Glutamate synthase [NAD 66.2 5.5 0.00019 41.5 4.9 35 330-376 121-155 (456)
322 3iwa_A FAD-dependent pyridine 66.1 4.5 0.00015 41.5 4.2 37 331-377 3-39 (472)
323 1vdc_A NTR, NADPH dependent th 66.0 4.2 0.00014 38.8 3.7 33 330-374 7-39 (333)
324 1n2s_A DTDP-4-, DTDP-glucose o 65.9 6.9 0.00024 36.8 5.2 86 333-446 2-104 (299)
325 1zk7_A HGII, reductase, mercur 65.8 5.3 0.00018 40.9 4.7 33 331-375 4-36 (467)
326 1pqw_A Polyketide synthase; ro 65.6 16 0.00053 32.7 7.3 50 314-375 22-72 (198)
327 4ej6_A Putative zinc-binding d 65.6 16 0.00055 36.5 8.1 136 306-471 159-309 (370)
328 2xve_A Flavin-containing monoo 65.3 5 0.00017 41.5 4.4 39 332-376 3-41 (464)
329 2c5a_A GDP-mannose-3', 5'-epim 64.9 23 0.0008 34.9 9.0 98 331-446 29-145 (379)
330 2gv8_A Monooxygenase; FMO, FAD 64.8 5.1 0.00017 40.8 4.3 37 330-376 5-41 (447)
331 3tzq_B Short-chain type dehydr 64.7 6.9 0.00023 37.2 4.9 77 327-422 7-96 (271)
332 2nu8_A Succinyl-COA ligase [AD 64.7 11 0.00039 37.0 6.7 86 331-442 7-93 (288)
333 3gg2_A Sugar dehydrogenase, UD 64.7 6 0.00021 41.5 4.9 32 332-375 3-34 (450)
334 3s5w_A L-ornithine 5-monooxyge 64.6 5.1 0.00018 40.6 4.2 40 331-377 30-69 (463)
335 3i3l_A Alkylhalidase CMLS; fla 64.5 7.7 0.00026 41.9 5.9 37 329-377 21-57 (591)
336 3dqp_A Oxidoreductase YLBE; al 64.3 12 0.00041 33.7 6.3 94 333-446 2-106 (219)
337 2q2v_A Beta-D-hydroxybutyrate 64.2 6.5 0.00022 36.8 4.6 35 329-375 2-37 (255)
338 1hdc_A 3-alpha, 20 beta-hydrox 63.9 7.2 0.00024 36.6 4.8 36 328-375 2-38 (254)
339 3grf_A Ornithine carbamoyltran 63.9 20 0.00067 36.6 8.4 137 262-417 90-240 (328)
340 1xq6_A Unknown protein; struct 63.8 8.7 0.0003 34.8 5.3 100 330-446 3-133 (253)
341 3ka7_A Oxidoreductase; structu 63.8 6.3 0.00022 39.1 4.7 32 333-376 2-33 (425)
342 3urh_A Dihydrolipoyl dehydroge 63.7 5.8 0.0002 41.0 4.5 34 331-376 25-58 (491)
343 3uox_A Otemo; baeyer-villiger 63.5 6.2 0.00021 42.1 4.8 35 330-376 8-42 (545)
344 1hxh_A 3BETA/17BETA-hydroxyste 63.5 4.9 0.00017 37.6 3.6 36 328-375 3-39 (253)
345 2cul_A Glucose-inhibited divis 63.3 6.5 0.00022 36.5 4.4 33 331-375 3-35 (232)
346 2o7s_A DHQ-SDH PR, bifunctiona 63.3 8.5 0.00029 40.9 5.8 36 328-375 361-396 (523)
347 4gcm_A TRXR, thioredoxin reduc 63.3 6 0.0002 37.6 4.2 32 332-375 7-38 (312)
348 2eq6_A Pyruvate dehydrogenase 63.2 5.6 0.00019 40.9 4.3 35 330-376 5-39 (464)
349 1dxl_A Dihydrolipoamide dehydr 63.2 6.9 0.00024 40.0 4.9 34 331-376 6-39 (470)
350 2dkn_A 3-alpha-hydroxysteroid 63.1 10 0.00035 34.5 5.6 68 333-422 3-73 (255)
351 2nvu_B Maltose binding protein 63.1 3.8 0.00013 45.7 3.1 37 329-376 409-445 (805)
352 3cmm_A Ubiquitin-activating en 63.1 5.7 0.0002 46.3 4.7 38 327-375 23-60 (1015)
353 2r9z_A Glutathione amide reduc 63.0 6.2 0.00021 40.7 4.6 33 331-375 4-36 (463)
354 2dq4_A L-threonine 3-dehydroge 62.9 7.5 0.00026 38.2 5.0 99 314-434 149-253 (343)
355 3pid_A UDP-glucose 6-dehydroge 62.8 21 0.00073 37.5 8.7 44 412-461 146-189 (432)
356 1uzm_A 3-oxoacyl-[acyl-carrier 62.4 18 0.00063 33.6 7.4 77 326-422 10-92 (247)
357 4ap3_A Steroid monooxygenase; 62.3 6.1 0.00021 42.2 4.5 35 330-376 20-54 (549)
358 3nrn_A Uncharacterized protein 62.3 6.9 0.00024 39.1 4.7 32 333-376 2-33 (421)
359 1dlj_A UDP-glucose dehydrogena 62.0 4.4 0.00015 41.6 3.2 30 333-375 2-31 (402)
360 2qae_A Lipoamide, dihydrolipoy 62.0 6.9 0.00023 40.1 4.7 34 331-376 2-35 (468)
361 3ruf_A WBGU; rossmann fold, UD 61.9 6.2 0.00021 38.1 4.1 101 329-446 23-151 (351)
362 3v76_A Flavoprotein; structura 61.8 6 0.00021 40.7 4.2 35 331-377 27-61 (417)
363 2hqm_A GR, grase, glutathione 61.7 6.4 0.00022 40.7 4.4 35 330-376 10-44 (479)
364 3ihm_A Styrene monooxygenase A 61.7 6.4 0.00022 40.1 4.3 32 332-375 23-54 (430)
365 2a87_A TRXR, TR, thioredoxin r 61.7 5.6 0.00019 38.3 3.7 34 330-375 13-46 (335)
366 3enk_A UDP-glucose 4-epimerase 61.6 8.7 0.0003 36.8 5.1 101 331-446 5-129 (341)
367 1fl2_A Alkyl hydroperoxide red 61.5 6.2 0.00021 37.2 4.0 32 332-375 2-33 (310)
368 7mdh_A Protein (malate dehydro 61.5 7.2 0.00024 40.5 4.7 109 331-449 32-161 (375)
369 2weu_A Tryptophan 5-halogenase 61.5 5.5 0.00019 41.2 3.9 37 332-377 3-39 (511)
370 4g6h_A Rotenone-insensitive NA 61.5 3.5 0.00012 43.5 2.4 32 332-375 43-74 (502)
371 2qa2_A CABE, polyketide oxygen 61.4 6.9 0.00024 41.0 4.6 34 330-375 11-44 (499)
372 2e4g_A Tryptophan halogenase; 61.1 7.1 0.00024 41.3 4.7 38 331-377 25-62 (550)
373 1sb8_A WBPP; epimerase, 4-epim 61.0 9.5 0.00033 37.0 5.3 101 329-446 25-153 (352)
374 2a8x_A Dihydrolipoyl dehydroge 61.0 6.6 0.00023 40.2 4.3 33 331-375 3-35 (464)
375 1vl0_A DTDP-4-dehydrorhamnose 60.9 7.6 0.00026 36.4 4.5 87 329-446 10-113 (292)
376 3ntd_A FAD-dependent pyridine 60.9 8.4 0.00029 40.2 5.2 36 332-377 2-37 (565)
377 3h28_A Sulfide-quinone reducta 60.9 6.9 0.00023 39.6 4.4 35 332-376 3-37 (430)
378 3cgb_A Pyridine nucleotide-dis 60.9 7 0.00024 40.4 4.5 65 304-378 6-73 (480)
379 3sxp_A ADP-L-glycero-D-mannohe 60.9 19 0.00065 35.1 7.4 108 327-446 6-138 (362)
380 2aqj_A Tryptophan halogenase, 60.9 7 0.00024 41.0 4.6 37 331-376 5-41 (538)
381 3kd9_A Coenzyme A disulfide re 60.9 9.3 0.00032 38.9 5.4 37 331-377 3-39 (449)
382 2d8a_A PH0655, probable L-thre 60.8 7 0.00024 38.5 4.3 119 314-456 153-277 (348)
383 1wdk_A Fatty oxidation complex 60.7 9.7 0.00033 42.3 5.9 33 331-375 314-346 (715)
384 4ep1_A Otcase, ornithine carba 60.5 38 0.0013 34.7 9.8 134 265-421 118-257 (340)
385 4gde_A UDP-galactopyranose mut 60.4 8.4 0.00029 39.1 5.0 23 331-353 10-32 (513)
386 3qj4_A Renalase; FAD/NAD(P)-bi 60.4 4.8 0.00016 39.1 3.0 35 332-375 2-36 (342)
387 1mv8_A GMD, GDP-mannose 6-dehy 60.3 6.1 0.00021 40.8 3.9 31 333-375 2-32 (436)
388 3n74_A 3-ketoacyl-(acyl-carrie 60.2 6.8 0.00023 36.5 3.9 77 327-422 5-94 (261)
389 3ec7_A Putative dehydrogenase; 60.1 4.2 0.00014 40.7 2.6 97 328-443 20-116 (357)
390 1w4x_A Phenylacetone monooxyge 60.1 7.2 0.00025 41.1 4.5 35 330-376 15-49 (542)
391 4gbj_A 6-phosphogluconate dehy 60.1 14 0.00047 36.4 6.3 89 332-447 6-98 (297)
392 1m6i_A Programmed cell death p 59.9 8.9 0.0003 40.0 5.1 38 330-377 10-47 (493)
393 2qcu_A Aerobic glycerol-3-phos 59.9 7.1 0.00024 40.7 4.4 34 331-376 3-36 (501)
394 3sx6_A Sulfide-quinone reducta 59.9 7 0.00024 39.7 4.3 36 332-376 5-40 (437)
395 1mo9_A ORF3; nucleotide bindin 59.8 6.9 0.00024 41.1 4.3 34 331-376 43-76 (523)
396 3sc6_A DTDP-4-dehydrorhamnose 59.8 5.6 0.00019 37.2 3.3 83 333-446 7-106 (287)
397 3dfz_A SIRC, precorrin-2 dehyd 59.7 6.8 0.00023 37.7 3.9 36 328-375 28-63 (223)
398 3tpc_A Short chain alcohol deh 59.6 20 0.00069 33.4 7.1 76 328-422 4-92 (257)
399 2qa1_A PGAE, polyketide oxygen 59.6 7.2 0.00025 40.9 4.4 35 329-375 9-43 (500)
400 4a5l_A Thioredoxin reductase; 59.6 6.2 0.00021 37.2 3.5 31 333-375 6-36 (314)
401 2yqu_A 2-oxoglutarate dehydrog 59.6 7.6 0.00026 39.6 4.5 33 332-376 2-34 (455)
402 2bc0_A NADH oxidase; flavoprot 59.6 8.3 0.00028 40.0 4.8 37 331-376 35-71 (490)
403 2wpf_A Trypanothione reductase 59.4 10 0.00035 39.6 5.5 32 331-373 7-38 (495)
404 2bry_A NEDD9 interacting prote 59.3 8.1 0.00028 40.4 4.7 36 331-378 92-127 (497)
405 3k30_A Histamine dehydrogenase 59.3 8.9 0.00031 41.8 5.2 34 331-376 391-424 (690)
406 1q1r_A Putidaredoxin reductase 59.2 8.6 0.00029 39.2 4.8 37 331-377 4-40 (431)
407 1zmd_A Dihydrolipoyl dehydroge 59.1 7.7 0.00026 39.8 4.4 34 331-376 6-39 (474)
408 2v3a_A Rubredoxin reductase; a 59.1 6.9 0.00024 38.9 4.0 35 331-375 4-38 (384)
409 3c4a_A Probable tryptophan hyd 58.9 8.2 0.00028 38.2 4.5 33 333-375 2-34 (381)
410 3k31_A Enoyl-(acyl-carrier-pro 58.9 11 0.00039 36.3 5.4 81 326-422 25-119 (296)
411 4fk1_A Putative thioredoxin re 58.9 7.9 0.00027 36.9 4.2 33 331-375 6-38 (304)
412 1ges_A Glutathione reductase; 58.8 6.6 0.00022 40.3 3.9 33 331-375 4-36 (450)
413 3ics_A Coenzyme A-disulfide re 58.8 9.3 0.00032 40.4 5.1 39 330-378 35-73 (588)
414 3c4n_A Uncharacterized protein 58.6 8.7 0.0003 38.5 4.7 34 332-375 37-70 (405)
415 1pl8_A Human sorbitol dehydrog 58.5 14 0.0005 36.4 6.2 49 314-374 156-204 (356)
416 3oc4_A Oxidoreductase, pyridin 58.3 8.9 0.0003 39.1 4.7 36 332-377 3-38 (452)
417 3gwf_A Cyclohexanone monooxyge 58.3 6.7 0.00023 41.8 3.9 36 330-376 7-42 (540)
418 3g3e_A D-amino-acid oxidase; F 58.3 9.5 0.00032 37.0 4.7 37 333-376 2-39 (351)
419 2gn4_A FLAA1 protein, UDP-GLCN 58.1 8.9 0.0003 37.8 4.5 105 326-446 16-142 (344)
420 1ebd_A E3BD, dihydrolipoamide 58.1 7.3 0.00025 39.8 4.0 32 332-375 4-35 (455)
421 3l8k_A Dihydrolipoyl dehydroge 58.1 8.7 0.0003 39.5 4.6 35 331-377 4-38 (466)
422 3ihg_A RDME; flavoenzyme, anth 58.0 7.2 0.00025 40.7 4.1 34 331-376 5-38 (535)
423 3ko8_A NAD-dependent epimerase 57.9 32 0.0011 32.3 8.3 94 333-446 2-113 (312)
424 1v59_A Dihydrolipoamide dehydr 57.7 9.3 0.00032 39.1 4.8 34 331-376 5-38 (478)
425 2jl1_A Triphenylmethane reduct 57.7 4.9 0.00017 37.6 2.5 98 333-446 2-107 (287)
426 1onf_A GR, grase, glutathione 57.7 7.7 0.00026 40.4 4.2 33 332-376 3-35 (500)
427 1lvl_A Dihydrolipoamide dehydr 57.4 8 0.00027 39.7 4.2 33 331-375 5-37 (458)
428 3fpz_A Thiazole biosynthetic e 57.2 8.4 0.00029 37.4 4.1 37 329-375 63-99 (326)
429 3o0h_A Glutathione reductase; 57.2 9.7 0.00033 39.3 4.8 33 331-375 26-58 (484)
430 2cdu_A NADPH oxidase; flavoenz 57.1 9 0.00031 39.0 4.5 34 333-376 2-35 (452)
431 4a2c_A Galactitol-1-phosphate 57.0 25 0.00084 34.3 7.5 55 308-374 139-193 (346)
432 2ydy_A Methionine adenosyltran 57.0 19 0.00065 34.1 6.5 92 331-446 2-110 (315)
433 1zk4_A R-specific alcohol dehy 56.8 8.7 0.0003 35.3 4.0 38 327-375 2-39 (251)
434 4h7p_A Malate dehydrogenase; s 56.7 16 0.00053 37.4 6.2 115 328-449 21-153 (345)
435 1nhp_A NADH peroxidase; oxidor 56.6 9.4 0.00032 38.8 4.5 35 333-377 2-36 (447)
436 3e1t_A Halogenase; flavoprotei 56.6 7 0.00024 40.7 3.7 35 330-376 6-40 (512)
437 3lad_A Dihydrolipoamide dehydr 56.6 10 0.00035 38.8 4.8 33 331-375 3-35 (476)
438 3oig_A Enoyl-[acyl-carrier-pro 56.4 17 0.00059 33.9 6.0 80 327-422 3-98 (266)
439 1rkx_A CDP-glucose-4,6-dehydra 56.4 20 0.00069 34.7 6.7 102 329-446 7-132 (357)
440 1rsg_A FMS1 protein; FAD bindi 56.2 9.5 0.00033 39.6 4.6 25 329-353 6-30 (516)
441 2pyx_A Tryptophan halogenase; 56.1 8.6 0.00029 40.2 4.3 39 331-376 7-52 (526)
442 3p19_A BFPVVD8, putative blue 56.1 12 0.00041 35.6 5.0 80 326-421 11-97 (266)
443 3uog_A Alcohol dehydrogenase; 56.0 11 0.00037 37.5 4.8 87 327-434 186-278 (363)
444 3i1j_A Oxidoreductase, short c 55.9 23 0.0008 32.4 6.8 37 327-375 10-47 (247)
445 1o5i_A 3-oxoacyl-(acyl carrier 55.7 36 0.0012 31.7 8.1 76 327-422 15-92 (249)
446 3st7_A Capsular polysaccharide 55.6 25 0.00085 34.4 7.3 79 333-446 2-94 (369)
447 3nyc_A D-arginine dehydrogenas 55.5 6 0.00021 38.2 2.8 33 331-376 9-41 (381)
448 1xdi_A RV3303C-LPDA; reductase 55.4 8.8 0.0003 39.8 4.2 36 332-376 3-38 (499)
449 4gqa_A NAD binding oxidoreduct 55.3 7.8 0.00027 39.2 3.7 104 319-434 13-118 (412)
450 4b63_A L-ornithine N5 monooxyg 55.2 6.8 0.00023 41.1 3.3 22 333-354 41-62 (501)
451 3m6i_A L-arabinitol 4-dehydrog 55.1 13 0.00043 36.8 5.1 55 308-374 158-212 (363)
452 3rwb_A TPLDH, pyridoxal 4-dehy 55.0 9.6 0.00033 35.6 4.0 37 327-375 2-39 (247)
453 1s3e_A Amine oxidase [flavin-c 55.0 10 0.00035 39.3 4.6 35 331-377 4-38 (520)
454 1ojt_A Surface protein; redox- 54.9 11 0.00036 39.0 4.6 34 331-376 6-39 (482)
455 1t2a_A GDP-mannose 4,6 dehydra 54.9 26 0.00087 34.2 7.2 101 332-446 25-156 (375)
456 2gqf_A Hypothetical protein HI 54.8 8.2 0.00028 39.3 3.8 35 331-377 4-38 (401)
457 3lov_A Protoporphyrinogen oxid 54.7 14 0.00049 37.3 5.5 36 331-376 4-39 (475)
458 4dgk_A Phytoene dehydrogenase; 54.6 8.7 0.0003 39.1 3.9 22 332-353 2-23 (501)
459 1ek6_A UDP-galactose 4-epimera 54.6 9.3 0.00032 36.7 3.9 103 332-446 3-132 (348)
460 2e1m_A L-glutamate oxidase; L- 54.6 11 0.00038 38.7 4.7 34 330-375 43-76 (376)
461 3i6d_A Protoporphyrinogen oxid 54.5 9.9 0.00034 37.9 4.2 22 332-353 6-27 (470)
462 2fwm_X 2,3-dihydro-2,3-dihydro 54.5 39 0.0013 31.4 8.1 75 328-421 4-84 (250)
463 2cdc_A Glucose dehydrogenase g 54.4 33 0.0011 34.0 8.0 33 331-375 181-213 (366)
464 3ktd_A Prephenate dehydrogenas 54.4 13 0.00043 37.8 5.0 91 332-446 9-101 (341)
465 2i0z_A NAD(FAD)-utilizing dehy 54.1 9.7 0.00033 38.9 4.2 34 332-377 27-60 (447)
466 2yg5_A Putrescine oxidase; oxi 53.9 11 0.00037 37.9 4.4 35 330-376 4-38 (453)
467 2r0c_A REBC; flavin adenine di 53.9 10 0.00035 40.1 4.4 34 331-376 26-59 (549)
468 3atr_A Conserved archaeal prot 53.9 5.7 0.0002 40.5 2.4 34 331-376 6-39 (453)
469 3tpf_A Otcase, ornithine carba 53.8 71 0.0024 32.2 10.4 135 262-419 81-222 (307)
470 1rp0_A ARA6, thiazole biosynth 53.6 11 0.00039 36.0 4.3 37 330-377 38-74 (284)
471 3dk9_A Grase, GR, glutathione 53.5 10 0.00034 39.0 4.2 34 330-375 19-52 (478)
472 2zb4_A Prostaglandin reductase 53.3 22 0.00076 34.9 6.5 53 312-375 140-195 (357)
473 2vvm_A Monoamine oxidase N; FA 53.3 11 0.00039 38.3 4.6 22 332-353 40-61 (495)
474 1xhc_A NADH oxidase /nitrite r 53.3 7.6 0.00026 38.8 3.2 35 331-378 8-42 (367)
475 2x6t_A ADP-L-glycero-D-manno-h 53.2 21 0.00071 34.6 6.2 102 329-446 44-163 (357)
476 2bi7_A UDP-galactopyranose mut 53.0 12 0.0004 37.8 4.5 34 331-376 3-36 (384)
477 4eez_A Alcohol dehydrogenase 1 52.9 32 0.0011 33.5 7.5 47 316-374 150-196 (348)
478 3un1_A Probable oxidoreductase 52.6 37 0.0013 32.0 7.7 75 329-422 26-107 (260)
479 1rpn_A GDP-mannose 4,6-dehydra 52.5 26 0.00089 33.4 6.7 103 330-446 13-138 (335)
480 3da1_A Glycerol-3-phosphate de 52.4 9.7 0.00033 40.6 4.0 33 331-375 18-50 (561)
481 2i76_A Hypothetical protein; N 52.3 2.1 7.3E-05 41.2 -1.0 21 333-353 4-24 (276)
482 1fec_A Trypanothione reductase 52.3 15 0.00052 38.1 5.4 32 331-373 3-34 (490)
483 1qsg_A Enoyl-[acyl-carrier-pro 52.1 14 0.00049 34.6 4.7 36 329-376 7-45 (265)
484 1kyq_A Met8P, siroheme biosynt 52.1 8.7 0.0003 38.1 3.3 36 328-375 10-45 (274)
485 2rgh_A Alpha-glycerophosphate 52.1 11 0.00038 40.2 4.4 34 331-376 32-65 (571)
486 2hcy_A Alcohol dehydrogenase 1 52.0 23 0.00079 34.8 6.4 44 318-374 158-202 (347)
487 3d6n_B Aspartate carbamoyltran 51.9 1.6E+02 0.0055 29.4 12.5 132 263-421 80-215 (291)
488 3nks_A Protoporphyrinogen oxid 51.9 11 0.00037 38.1 4.1 34 332-375 3-36 (477)
489 1o94_A Tmadh, trimethylamine d 51.9 12 0.0004 41.3 4.7 34 331-376 389-422 (729)
490 4fs3_A Enoyl-[acyl-carrier-pro 51.8 14 0.00048 34.9 4.7 36 328-375 3-41 (256)
491 3csu_A Protein (aspartate carb 51.8 1.2E+02 0.0041 30.5 11.7 136 262-421 88-231 (310)
492 1cjc_A Protein (adrenodoxin re 51.7 14 0.00049 38.3 5.0 35 331-375 6-40 (460)
493 3m1a_A Putative dehydrogenase; 51.4 11 0.00037 35.6 3.7 74 329-421 3-89 (281)
494 1piw_A Hypothetical zinc-type 51.4 41 0.0014 33.2 8.2 96 317-434 167-267 (360)
495 3mz0_A Inositol 2-dehydrogenas 51.1 6.8 0.00023 38.7 2.4 93 332-443 3-95 (344)
496 3oqb_A Oxidoreductase; structu 50.9 9.6 0.00033 38.1 3.5 96 329-443 4-112 (383)
497 2iid_A L-amino-acid oxidase; f 50.9 16 0.00055 37.3 5.2 33 331-375 33-65 (498)
498 3cmm_A Ubiquitin-activating en 50.8 11 0.00036 44.0 4.2 42 328-375 422-463 (1015)
499 2b9w_A Putative aminooxidase; 50.7 14 0.00047 36.8 4.5 36 330-376 5-40 (424)
500 2bcg_G Secretory pathway GDP d 50.2 12 0.00043 38.3 4.3 36 331-378 11-46 (453)
No 1
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=100.00 E-value=1.2e-190 Score=1513.66 Aligned_cols=470 Identities=54% Similarity=0.967 Sum_probs=464.1
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 009982 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (521)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~ky~~L~~L~~~Ne~Lfy~ll~~ 129 (521)
++|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|++|++++++|+||+||++||+|||+||||++++
T Consensus 1 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 80 (555)
T 1gq2_A 1 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTS 80 (555)
T ss_dssp CCTTHHHHCTTTCCGGGSCHHHHHHTTCTTSSCSCBCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CChhhhccCCcccCCCCCCHHHHHHCCCccCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCcceeeehhhHhh
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCccccchh
Q 009982 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (521)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (521)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+|+++++++|||.++|+|||||||||||||||+|++|||||||
T Consensus 81 ~~~e~lpivYTP~V~~ac~~~s~i~~~p~g~yis~~d~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g~~ipvG 160 (555)
T 1gq2_A 81 DIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVG 160 (555)
T ss_dssp THHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHHTSSCSCCCEEEEECSSSCGGGCCCGGGGGHHHHH
T ss_pred hHHHhcCcccCchHHHHHHHHHHHhcChhhhhcccCCHHHHHHHHhcCCCCCcEEEEEEccccccccCCCCCCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH
Q 009982 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (521)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (521)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 161 Kl~Ly~~~aGIdP~~~lPI~LD~GTnn~~LL~DplYlG~r~~Rv~g~eyd~fvdefv~av~~~fGp~~~I~~EDf~~~~a 240 (555)
T 1gq2_A 161 KLALYTACGGVKPHQCLPVMLDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240 (555)
T ss_dssp HHHHHHHTTCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCTHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHhHhccCCChhheeeeEeecCCCchhhcCCCccCCcCCCCCchHHHHHHHHHHHHHHHHhhCCCcEEeecccCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 009982 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (521)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i 369 (521)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 241 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAg~gia~ll~~~~~~~-G~~~eeA~~~i 319 (555)
T 1gq2_A 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANLIVMAMQKE-GVSKEEAIKRI 319 (555)
T ss_dssp HHHHHHHTTTSEEEETTTHHHHHHHHHHHHHHHHHHTSCGGGCCEEEECCSHHHHHHHHHHHHHHHHH-TCCHHHHHTTE
T ss_pred HHHHHHHhccCCEecCccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChHHHhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 99999999999
Q ss_pred EEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||||||||
T Consensus 320 ~~~D~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt 398 (555)
T 1gq2_A 320 WMVDSKGLIVKGRA-SLTPEKEHFAHEHCEMKNLEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPT 398 (555)
T ss_dssp EEEETTEECBTTCS-SCCTTGGGGCBSCCCCCCHHHHHHHHCCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECCSSG
T ss_pred EEEECCCeeeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECCCCC
Confidence 99999999999996 49999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHhcccCCcEEEecCCCCCccee-CCEEeccccccceeechhhhHHHHHhCCCccCHHHHHhhcC
Q 009982 450 SQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAACK 521 (521)
Q Consensus 450 ~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~-~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~ 521 (521)
+++||+||||++||+|+|||||||||+||+| +||+++|||+||+|+|||||||+++++|++|||+|++|||+
T Consensus 399 ~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~Grs~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~ 471 (555)
T 1gq2_A 399 SKAECTAEQLYKYTEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAE 471 (555)
T ss_dssp GGCSSCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred CccCcCHHHHHHhccCCEEEEeCCCCCCeeecCCcEeccccccceeeccchhhhhHhcCCeECCHHHHHHHHH
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999999984
No 2
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=100.00 E-value=4.5e-190 Score=1512.80 Aligned_cols=471 Identities=52% Similarity=0.957 Sum_probs=464.3
Q ss_pred ccccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHHHhhh
Q 009982 50 ASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYKLLID 129 (521)
Q Consensus 50 ~~G~~ll~~p~~NKG~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~ky~~L~~L~~~Ne~Lfy~ll~~ 129 (521)
.+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|++|++++++|+||+||++||+|||+||||++++
T Consensus 3 ~~G~~lL~~p~~NKGtAFt~~ER~~l~l~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfy~ll~~ 82 (564)
T 1pj3_A 3 EKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQD 82 (564)
T ss_dssp CCSTHHHHSTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHhCCCcccCCCCCCHHHHHhCCCCcCCCCCcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHhhcccceeehhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCccccchh
Q 009982 130 NVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVG 209 (521)
Q Consensus 130 ~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~GmgI~~G 209 (521)
|++|+|||+||||||++|++||+|||+|+|+|+|++|+++|+++|+|||.++|+|||||||||||||||+|++||+||||
T Consensus 83 ~~~e~lpivYTP~Vg~ac~~~s~i~~~p~g~ylsi~d~~~i~~~l~n~~~~~v~v~VVTDG~~ILGLGD~G~~gm~ipvG 162 (564)
T 1pj3_A 83 DIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVG 162 (564)
T ss_dssp CHHHHHHHHSTTHHHHHHHTHHHHCSSCCSEEEEGGGTTCHHHHHTTCSCSCCCEEEEECSSSCTTSCCCGGGGGHHHHH
T ss_pred CHHHhCCeeeCccHHHHHHHHHHHhcCcccccccccCHHHHHHHHHhCCCCCceEEEEEcccccccCCCCCCCcccceeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH
Q 009982 210 KLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA 289 (521)
Q Consensus 210 Kl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a 289 (521)
|++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++||||||++|||
T Consensus 163 Kl~Ly~~~aGIdP~~~lPI~lDvgTnn~~LL~DPlYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~a 242 (564)
T 1pj3_A 163 KLCLYTACAGIRPDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNA 242 (564)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEESCCCCTTGGGCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHH
T ss_pred HHHHHHhccCCChhheeeeEeecCcCchhhccCCcccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcE
Q 009982 290 FELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKI 369 (521)
Q Consensus 290 f~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i 369 (521)
|+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|||++||
T Consensus 243 f~il~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~eeA~~~i 321 (564)
T 1pj3_A 243 FRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVEN-GLSEQEAQKKI 321 (564)
T ss_dssp HHHHHHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHT-TCCHHHHHHTE
T ss_pred HHHHHHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHc-CCChHHhhCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999885 99999999999
Q ss_pred EEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 370 CLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 370 ~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
||||++|||+++|.++|+++|++||++.++. ++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||||||
T Consensus 322 ~~~D~~Gli~~~r~~~l~~~k~~~A~~~~~~~~~~L~eav~~vkp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSN 401 (564)
T 1pj3_A 322 WMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSN 401 (564)
T ss_dssp EEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHHHHCCSEEEECCCSSCCSCHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEeCCCeEECCCcccchHHHHHHHHhcCccccCCHHHHHhhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCC
Confidence 9999999999999435999999999987766 79999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHhcccCCcEEEecCCCCCccee-CCEEeccccccceeechhhhHHHHHhCCCccCHHHHHhhcC
Q 009982 448 PTSQSECTAEEAYTWSKGRAIFASGSPFDPFEY-NGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAACK 521 (521)
Q Consensus 448 Pt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~-~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~ 521 (521)
||+++||+||||++||+|+|||||||||+||+| +||+|+|||+||+|+|||||||+++++|++|||+|++|||+
T Consensus 402 Pt~~aE~~pe~a~~~t~G~aivATGspf~pv~~~~G~~~~pnQ~NN~liFPGi~~Gal~~~A~~Itd~M~~aAA~ 476 (564)
T 1pj3_A 402 PTAQAECTAEEAYTLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAK 476 (564)
T ss_dssp SGGGCSCCHHHHHHHTTTCCEEEESSCCCCEECTTSCEECCEECCGGGTHHHHHHHHHHTTCSCCCHHHHHHHHH
T ss_pred CCCccCcCHHHHHhhccCCEEEEeCCCCCceeecCCceecccccceeeeccchhhhhHhcCCeECCHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999999999999999999999999999999984
No 3
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=100.00 E-value=5.5e-190 Score=1516.47 Aligned_cols=474 Identities=50% Similarity=0.889 Sum_probs=466.9
Q ss_pred ccccccccccccCCCCCcCCCCCHHHHhhcccCCCCCCccccHHHHHHHHHHHhhcCCCchhHHHHhhhhhhhhhhhhHH
Q 009982 46 TISVASGYCLLRDPRHNKGLAFTEKERDAHYLRGLLPPAVISQQLQEKKLMNSIRQYEVPLQKYVAMMELEERNERLFYK 125 (521)
Q Consensus 46 ~~~~~~G~~ll~~p~~NKG~aFt~~ER~~l~l~GLlPp~v~t~e~Q~~r~~~~~~~~~~~l~ky~~L~~L~~~Ne~Lfy~ 125 (521)
..+..+|+++|+||++|||||||.+||++|||+|||||+|+|+|+|++|+|.+|++++++|+||+||++||+|||+||||
T Consensus 33 ~~~~~~G~~lL~~p~~NKGtAFt~~ER~~l~L~GLLPp~v~t~e~Q~~r~~~~~~~~~~~l~k~~~L~~L~~~Ne~Lfyr 112 (605)
T 1o0s_A 33 VTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYR 112 (605)
T ss_dssp CCCSCCHHHHHTCTTTCCGGGSCHHHHHHTTCTTTSCSCCCCHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHCHHHHHH
T ss_pred cccCcchHHHhCCCcccCCCCCCHHHHHHCCCCcCCCCCcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHhhcccchhhhh
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCc--chHHHHHhcCCCCCeeEEEEecCceeeccCCCCCCc
Q 009982 126 LLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEK--GKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQG 203 (521)
Q Consensus 126 ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~--g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~G 203 (521)
++++|++|+|||+||||||++|++||+|||+|+|+|+|++|+ |+++++|+|||.++|+|||||||||||||||+|++|
T Consensus 113 ll~~~~~e~lpivYTPtVg~ac~~~s~i~r~p~g~yis~~d~~~~~i~~~l~n~~~~~~~v~VVTDG~~ILGLGD~G~~g 192 (605)
T 1o0s_A 113 VVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYG 192 (605)
T ss_dssp HHHHTHHHHHHHHSTTHHHHHHHHHCSCCCCCCSEEEEGGGCSHHHHHHHHTTSSCSCCCEEEEECSSCBTTTBCCGGGG
T ss_pred hhhhCHHHhCCeeeCccHHHHHHHHHHHhcChHhhhccccCcccchHHHHHhcCCCCCceEEEEEccccceecCCCCCCc
Confidence 999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cccchhhhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeec
Q 009982 204 MGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFED 283 (521)
Q Consensus 204 mgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~ED 283 (521)
|||||||++|||+||||||++|||||||+|||||+||+||+||||||+|++|++|++|+||||++|+++|||+++|||||
T Consensus 193 ~~ipvGKl~Ly~~~aGIdP~~~lPI~LDvGTnne~LL~DPlYlG~r~~Rv~g~~Yd~fvdefv~av~~~fGp~~~I~~ED 272 (605)
T 1o0s_A 193 IGIPVGKLALYVALGGVQPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQFED 272 (605)
T ss_dssp GHHHHHHHHHHHHHHCCCGGGEEEEEEESCCCCHHHHHCTTCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CcceeeHHHHHHhccCCChhheeeeEeccCCChhhhccCCcccCcCCCCCChHHHHHHHHHHHHHHHHHhCCCcEeeHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChh
Q 009982 284 FANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVE 363 (521)
Q Consensus 284 f~~~~af~iL~ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~e 363 (521)
|++||||+||+|||++||||||||||||+|+||||+||+|++|++|+||||||+|||+||+|||+||+.+|+++ |+|+|
T Consensus 273 f~~p~af~il~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~-Gl~~e 351 (605)
T 1o0s_A 273 FANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNE-GISKE 351 (605)
T ss_dssp CCHHHHHHHHHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTT-TCCHH
T ss_pred cCCccHHHHHHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHc-CCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999874 99999
Q ss_pred hhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009982 364 ETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (521)
Q Consensus 364 eA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (521)
||++||||||++|||+++|. +|+++|++||++.++.++|+|||+++|||||||+|+++|+||+|||++|+++|+|||||
T Consensus 352 eA~~~i~~vD~~Gli~~~r~-~l~~~k~~~A~~~~~~~~L~eav~~vkpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIF 430 (605)
T 1o0s_A 352 EACNRIYLMDIDGLVTKNRK-EMNPRHVQFAKDMPETTSILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIF 430 (605)
T ss_dssp HHHHTEEEEETTEECBTTCS-SCCGGGTTTCBSSCCCCCHHHHHHHHCCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEE
T ss_pred hhhCeEEEEECCCceeCCCC-CchHHHHHHHhhcCCCCCHHHHHhhcCCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEE
Confidence 99999999999999999996 49999999999877778999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEeccccccceeechhhhHHHHHhCCCccCHHHHHhhcC
Q 009982 444 ALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDMLLAACK 521 (521)
Q Consensus 444 aLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~~aAA~ 521 (521)
||||||+++||+||||++||+|+|||||||||+||+|+||+++|||+||+|||||||||+++++|++|||+|++|||+
T Consensus 431 aLSNPt~~aE~~pe~a~~~t~G~aivATGspF~pV~~~Grs~~pnQ~NN~liFPGi~lGal~~~A~~Itd~M~~aAA~ 508 (605)
T 1o0s_A 431 ALSNPTSKAECTAEEAYTFTNGAALYASGSPFPNFELNGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAK 508 (605)
T ss_dssp ECCSSGGGCSSCHHHHHHTTTSCCEEEESSCCCCEEETTEEECCEECCGGGTHHHHHHHHHHHTBSCCCHHHHHHHHH
T ss_pred ECCCCCCCcCcCHHHHHhhccCCEEEEECCCCCCeeECCEEeccccccceeeccchhhhhhhcCCeEcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999984
No 4
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=100.00 E-value=3.1e-111 Score=887.73 Aligned_cols=323 Identities=32% Similarity=0.455 Sum_probs=288.9
Q ss_pred hhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCC-Ccccc
Q 009982 128 IDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGC-QGMGI 206 (521)
Q Consensus 128 ~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~-~GmgI 206 (521)
+++. +.|||+||||||++|++|+ +|+++++++..+| ++|||||||||||||||+|+ +||||
T Consensus 55 ~~~~-~dLslaYTPgVa~~c~~i~-------------~dp~~~~~yt~kg----n~VaVVTDG~aILGLGDiG~~agmpI 116 (487)
T 3nv9_A 55 LAGF-NWFNAYYTPGVSRISTNIR-------------DNNDSSLFYSLRG----NFVGVVSDSTRVLGDGDVTPPGGLGV 116 (487)
T ss_dssp CSSG-GGHHHHSTTTHHHHHHHHH-------------HCGGGHHHHSGGG----GEEEEEECSSSBGGGBCCCGGGGHHH
T ss_pred CCCH-HHCeeeeCcchHHHHHHHH-------------hChHHHhhhcccC----CEEEEEEcCceeeeccccccccCCch
Confidence 3444 4599999999999999985 3566777665555 68999999999999999999 58999
Q ss_pred chhhhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCC
Q 009982 207 PVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFAN 286 (521)
Q Consensus 207 ~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~ 286 (521)
||||++|||+||||| |||||||+||+| +++|| |+| .|||+++.++||. ||||||++
T Consensus 117 meGKl~Lyk~~aGId---~lPI~LD~gt~~--~~~d~---------------def-ve~v~~~~P~fG~---InlEDf~a 172 (487)
T 3nv9_A 117 MEGKALLMKYLGGID---AVPICIDSKNKE--GKNDP---------------DAV-IEFVQRIQHTFGA---INLEDISQ 172 (487)
T ss_dssp HHHHHHHHHHHHCCE---EEEEECCCBCTT--SCBCH---------------HHH-HHHHHHHGGGCSE---EEECSCCT
T ss_pred hhhHHHHHHhcCCCc---eeeeEEeCCCcc--ccCCH---------------HHH-HHHHHHhCCCCCe---ecHhhcCC
Confidence 999999999999999 999999999765 46664 443 3577777777766 99999999
Q ss_pred ccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhh
Q 009982 287 HNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEE 364 (521)
Q Consensus 287 ~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~ee 364 (521)
||||+||+|||+ +||||||||||||+|+||||+||+|++|++|+|+||||+|||+||+|||+||+. .|+++
T Consensus 173 p~af~il~ryr~~~~ipvFnDD~qGTA~V~lAgllnAlki~gk~l~d~riV~~GAGaAGigia~ll~~-----~G~~~-- 245 (487)
T 3nv9_A 173 PNCYKILDVLRESCDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVT-----AGADP-- 245 (487)
T ss_dssp THHHHHHHHHHHHCSSCEEETTTHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSHHHHHHHHHHHH-----TTCCG--
T ss_pred chHHHHHHHHHhhccCCccccccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHH-----cCCCc--
Confidence 999999999998 899999999999999999999999999999999999999999999999999975 49976
Q ss_pred hcCcEEEEecCCccccCCccCC-----chhchhhccccC--CCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHcC
Q 009982 365 TRKKICLVDSKGLIVSSRKDSL-----QHFKKPWAHEHE--PVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASF 436 (521)
Q Consensus 365 A~~~i~lvDs~GLi~~~R~~~l-----~~~k~~fa~~~~--~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~ 436 (521)
+||||||++|||+++|.+ | .++|.+||++.. ..++|+|||++ +|||||+|++ +|+||+|||++|+
T Consensus 246 --~~i~l~D~~Gli~~~R~~-l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~--adVlIG~S~~~pg~ft~e~V~~Ma-- 318 (487)
T 3nv9_A 246 --KKIVMFDSKGSLHNGRED-IKKDTRFYRKWEICETTNPSKFGSIAEACVG--ADVLISLSTPGPGVVKAEWIKSMG-- 318 (487)
T ss_dssp --GGEEEEETTEECCTTCHH-HHHCGGGHHHHHHHHHSCTTCCCSHHHHHTT--CSEEEECCCSSCCCCCHHHHHTSC--
T ss_pred --ccEEEEeccccccCCcch-hhhhcccHHHHHHHHhcccccCCCHHHHHhc--CCEEEEecccCCCCCCHHHHHhhc--
Confidence 899999999999999954 6 346678888642 46799999998 7999999976 7999999999997
Q ss_pred CCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEeccccccceeechhhhHHHHHhCCCccCHHHH
Q 009982 437 NEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHDDML 516 (521)
Q Consensus 437 ~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd~M~ 516 (521)
+||||||||||| |||+||||++ +|+||||||| +++|||+||+|+|||||||+++++|++|||+|+
T Consensus 319 -~~PIIFaLSNPt--pEi~pe~A~~--~G~aIvATGr----------sd~PnQ~NN~liFPGI~~Gal~~~A~~Itd~M~ 383 (487)
T 3nv9_A 319 -EKPIVFCCANPV--PEIYPYEAKE--AGAYIVATGR----------GDFPNQVNNSVGFPGILKGALIVRARKITDNMA 383 (487)
T ss_dssp -SSCEEEECCSSS--CSSCHHHHHH--TTCSEEEESC----------TTSSSBCCGGGTHHHHHHHHHHTTCSSCCHHHH
T ss_pred -CCCEEEECCCCC--ccCCHHHHHH--hCCEEEEECC----------CCCcccCcceeEcchhhHHHHHcCCcccCHHHH
Confidence 899999999999 7999999998 5999999994 678999999999999999999999999999999
Q ss_pred HhhcC
Q 009982 517 LAACK 521 (521)
Q Consensus 517 ~aAA~ 521 (521)
++||+
T Consensus 384 ~AAA~ 388 (487)
T 3nv9_A 384 IAASR 388 (487)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99984
No 5
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=100.00 E-value=6.8e-106 Score=837.10 Aligned_cols=321 Identities=31% Similarity=0.442 Sum_probs=295.3
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 009982 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (521)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (521)
.+++++.+++. |+|||+||||||++|++|+ ++|+ +++ +||.++++|+|||||+|||||||+|
T Consensus 23 ~~~~~~~~~~~-~~l~i~YtP~V~~~c~~i~---~~p~----------~v~----~~t~~~~~V~VvTdG~~iLGLGD~G 84 (398)
T 2a9f_A 23 EVQPKVDIKTK-HDLSIAYTPGVASVSSAIA---KDKT----------LAY----DLTTKKNTVAVISDGTAVLGLGDIG 84 (398)
T ss_dssp EEEESSCCSSH-HHHHHHSTTTTHHHHHHHH---HCGG----------GHH----HHSGGGTEEEEEECSSSCTTSCCCC
T ss_pred EEEEecccCCH-HHCeEEECchHHHHHHHHH---hCHH----------HHH----HhcccCCEEEEEECCccccCCCCcc
Confidence 46677778877 5589999999999999986 4554 444 6899999999999999999999999
Q ss_pred CC-ccccchhhhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 009982 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (521)
Q Consensus 201 ~~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (521)
++ |||||+||+.|||+||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 85 ~~aG~pI~eGK~~Lf~~~agid---~~pi~Ldv~~---------------------------~dEfv~~v~~~~-p~F~~ 133 (398)
T 2a9f_A 85 PEAAMPVMEGKAALFKAFAGVD---AIPIVLDTKD---------------------------TEEIISIVKALA-PTFGG 133 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCE---EEEEECCCCC---------------------------HHHHHHHHHHHG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eeeeEeCCCC---------------------------HHHHHHHHHHcC-CceeE
Confidence 98 9999999999999999999 9999999996 799999999988 77 88
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
||||||++||||++|+|||+ +||||||||||||+|+|||++||+|++|++++|+||||+|||+||+|||++++.+
T Consensus 134 I~lED~~~p~~f~il~~~r~~~~ipvf~DDiqGTa~V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~--- 210 (398)
T 2a9f_A 134 INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA--- 210 (398)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eccccCCChHHHHHHHHhhhcCCcceecchhhhHHHHHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999999997 5999999999999999999999999999999999999999999999999999875
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM 433 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M 433 (521)
|+ ++||+||++|||+++|.++|+++|++||++... ..+|+|+|++ +|||||+|+ +|+||+|||++|
T Consensus 211 --Ga------~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~--ADV~IG~Sa-pgl~T~EmVk~M 279 (398)
T 2a9f_A 211 --GA------TKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEG--ADIFIGVSA-PGVLKAEWISKM 279 (398)
T ss_dssp --TC------CEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHT--TCSEEECCS-TTCCCHHHHHTS
T ss_pred --CC------CeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhcc--CCEEEecCC-CCCCCHHHHHhh
Confidence 64 799999999999999933599999999987543 4689999998 899999999 899999999999
Q ss_pred HcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEeccccccceeechhhhHHHHHhCCCccCH
Q 009982 434 ASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVHD 513 (521)
Q Consensus 434 a~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~Itd 513 (521)
+ ++|||||||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||+++++|++|||
T Consensus 280 a---~~pIIfalsNPt--~E~~pe~a~~~--g~~i~atG----------rs~~p~Q~NN~~~FPgi~~Gal~~~a~~I~d 342 (398)
T 2a9f_A 280 A---ARPVIFAMANPI--PEIYPDEALEA--GAYIVGTG----------RSDFPNQINNVLAFPGIFRGALDARAKTITV 342 (398)
T ss_dssp C---SSCEEEECCSSS--CSSCHHHHHTT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHTCSSCCH
T ss_pred C---CCCEEEECCCCC--ccCCHHHHHHh--CCeEEEeC----------CCCCCCcCCceeEcchHHHHHHHcCCcCCCH
Confidence 8 899999999999 89999999999 99999999 5899999999999999999999999999999
Q ss_pred HHHHhhcC
Q 009982 514 DMLLAACK 521 (521)
Q Consensus 514 ~M~~aAA~ 521 (521)
+|+++||+
T Consensus 343 ~m~~aAa~ 350 (398)
T 2a9f_A 343 EMQIAAAK 350 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999984
No 6
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=100.00 E-value=3e-102 Score=808.23 Aligned_cols=320 Identities=31% Similarity=0.461 Sum_probs=298.9
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 009982 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (521)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (521)
..++++.+++.|+ |||+||||||++|++|+ ++|+++| +|+.++++|+|||||||||||||+|
T Consensus 27 ~~~~~~~~~~~~~-l~i~YtP~V~~~c~~~~---~~p~~v~--------------~~t~~~~~V~VvTdg~~vLGlGD~G 88 (388)
T 1vl6_A 27 RTALPVEKVDRET-LSLLYTPGVADVARACA---EDPEKTY--------------VYTSRWNTVAVVSDGSAVLGLGNIG 88 (388)
T ss_dssp EEECSCSCCCHHH-HHHHSTTTHHHHHHHHH---HCGGGHH--------------HHSGGGGEEEEEECSTTBTTTBSCC
T ss_pred EEEEeeecCCHHH-CeEEECchHHHHHHHHH---hCHHHHH--------------hhcccCCeEEEEECCccccCCCccc
Confidence 5788889999866 89999999999999986 5665443 6899999999999999999999999
Q ss_pred CC-ccccchhhhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 009982 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (521)
Q Consensus 201 ~~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (521)
++ |||||+||+.|||+||||| |+|||||+|| +||||++|++.| |. ..
T Consensus 89 ~~ag~pI~egK~~Lf~~~agid---~~pi~ldv~~---------------------------~dE~v~~vk~~~-p~f~~ 137 (388)
T 1vl6_A 89 PYGALPVMEGKAFLFKAFADID---AFPICLSESE---------------------------EEKIISIVKSLE-PSFGG 137 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCCC---------------------------HHHHHHHHHHTG-GGCSE
T ss_pred cccCCcchhCHHHHHHhccCCc---eEeEEeCCCC---------------------------HHHHHHHHHHcC-CcceE
Confidence 98 9999999999999999999 9999999996 799999999988 66 88
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
||||||++||||++|+|||+ +||||||||||||+|++||++||+|++|++|+|+||||+|||+||++||++++..
T Consensus 138 i~lED~~~p~af~il~r~r~~~~Ipvf~DDiqGTasV~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~--- 214 (388)
T 1vl6_A 138 INLEDIGAPKCFRILQRLSEEMNIPVFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDL--- 214 (388)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHH---
T ss_pred eCHhhcCCHHHHHHHHHhhhhcCcceeccccccHHHHHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhC---
Confidence 99999999999999999997 6999999999999999999999999999999999999999999999999999874
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccC-CchhchhhccccCC---CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDS-LQHFKKPWAHEHEP---VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA 432 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~-l~~~k~~fa~~~~~---~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~ 432 (521)
| .++||++|++|||+.+|.+. |+++|++||++... ..+|.|+|++ +|||||+|+ +|+||+|+|++
T Consensus 215 --G------~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~--ADVlIG~Sa-p~l~t~emVk~ 283 (388)
T 1vl6_A 215 --G------VKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG--ADFFIGVSR-GNILKPEWIKK 283 (388)
T ss_dssp --T------CCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT--CSEEEECSC-SSCSCHHHHTT
T ss_pred --C------CCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHcc--CCEEEEeCC-CCccCHHHHHh
Confidence 6 38999999999999999643 99999999987543 4689999998 999999999 79999999999
Q ss_pred HHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEeccccccceeechhhhHHHHHhCCCccC
Q 009982 433 MASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVISGAIRVH 512 (521)
Q Consensus 433 Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~~~a~~It 512 (521)
|+ ++||||+||||| |||+||||++| |+|||||| |+++|||+||+|+|||||||+++++|+ ||
T Consensus 284 Ma---~~pIIfalSNPt--~E~~p~~a~~~--g~~i~atG----------r~~~p~Q~NN~~~FPgi~~Gal~~~a~-i~ 345 (388)
T 1vl6_A 284 MS---RKPVIFALANPV--PEIDPELAREA--GAFIVATG----------RSDHPNQVNNLLAFPGIMKGAVEKRSK-IT 345 (388)
T ss_dssp SC---SSCEEEECCSSS--CSSCHHHHHHT--TCSEEEES----------CTTSSSBCCGGGTHHHHHHHHHHHCSC-CC
T ss_pred cC---CCCEEEEcCCCC--CCCCHHHHHHh--cCeEEEeC----------CCCCCCcCCceeEcchHhHHHHhcCCc-cC
Confidence 97 799999999999 99999999999 99999999 589999999999999999999999999 99
Q ss_pred HHHHHhhcC
Q 009982 513 DDMLLAACK 521 (521)
Q Consensus 513 d~M~~aAA~ 521 (521)
|+|+++||+
T Consensus 346 ~~m~~aAa~ 354 (388)
T 1vl6_A 346 KNMLLSAVE 354 (388)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999984
No 7
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=100.00 E-value=7.2e-76 Score=619.59 Aligned_cols=322 Identities=31% Similarity=0.495 Sum_probs=289.9
Q ss_pred hhhHHHhhhcccccCCcccchhhHHHHHHHhhhhcCCCcccccccCcchHHHHHhcCCCCCeeEEEEecCceeeccCCCC
Q 009982 121 RLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLG 200 (521)
Q Consensus 121 ~Lfy~ll~~~~ee~lpivYTPtVg~ac~~~s~i~r~p~gly~s~~d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG 200 (521)
..++++.+++.+ +|||+||||||++|++|++ |++++++ ||.++|+|+|||||+|||||||+|
T Consensus 21 ~~~~~~~~~~~~-~l~~~YtP~v~~~c~~~~~-------------~~~~~~~----~~~~~~~v~vvtdgt~ilGlG~iG 82 (439)
T 2dvm_A 21 EVIPKVSLESRE-ELTLAYTPGVAEPCKEIAR-------------DPGKVYE----YTSKGNLVAVVSDGSRILGLGNIG 82 (439)
T ss_dssp EEEESSCCCSHH-HHHHHSTTTTHHHHHHHHH-------------CGGGHHH----HSSGGGEEEEEECSTTBTTTBCCC
T ss_pred EEEEeeccCCHH-HCeeEECchhHHHHHHHHH-------------CHHHHHh----hcccCcEEEEEECCCeEeccccee
Confidence 456777888875 4899999999999999873 6667764 889999999999999999999999
Q ss_pred CC-ccccchhhhhHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHHhcCCC-ee
Q 009982 201 CQ-GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEK-VL 278 (521)
Q Consensus 201 ~~-GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~-~l 278 (521)
.+ ++|+|+||++||++||||| ++|++||+. | .|||+++|+..+ |+ ..
T Consensus 83 ~hS~sPvmh~ka~lf~~~gGid---~~yi~ldv~--------d-------------------~de~~~~v~~l~-~~f~G 131 (439)
T 2dvm_A 83 PLAGLPVMEGKALLFKRFGGVD---AFPIMIKEQ--------E-------------------PNKFIDIVKAIA-PTFGG 131 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCE---EEEEECSCC--------S-------------------HHHHHHHHHHTG-GGCSE
T ss_pred ccccCHHHHHHHHHHHHhCCCC---CeeeeeecC--------C-------------------HHHHHHHHHHhC-ccCcE
Confidence 97 7999999999999999999 999999992 2 577888887765 44 56
Q ss_pred eeeecCCCccHHHHHHHHcC--CCceeccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 279 IQFEDFANHNAFELLAKYGT--THLVFNDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 279 Iq~EDf~~~~af~iL~ryr~--~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
||||||+.|+||++|++|++ ++||||||+||||++.++|+++|++..|++|+++|+||+|||+||.+|+.+|.+.
T Consensus 132 invED~T~P~k~~il~~l~~avNt~vf~dD~~gtgntd~aG~~~AL~~~g~~l~~~rvlvlGAGgAg~aia~~L~~~--- 208 (439)
T 2dvm_A 132 INLEDIASPKCFYILERLREELDIPVFHDDQQGTAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRILTEA--- 208 (439)
T ss_dssp EEECSCCTTHHHHHHHHHHHHCSSCEEEHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEECCSHHHHHHHHHHHHT---
T ss_pred EEEEeCCCchHHHHHHHHHHhcCEEEEeCCCcEEeehHHHHHHHHHHHhCCCccCCEEEEECccHHHHHHHHHHHHc---
Confidence 99999999999999999986 7999999999999999999999999999999999999999999999999999864
Q ss_pred hcCCChhhhcCcEEEEe----cCCccccCCccC---CchhchhhccccC---CCCCHHHHhcccCCcEEEEccCCC-CCC
Q 009982 357 QTKAPVEETRKKICLVD----SKGLIVSSRKDS---LQHFKKPWAHEHE---PVNNLLDAVKVIKPTILIGSSGVG-RTF 425 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvD----s~GLi~~~R~~~---l~~~k~~fa~~~~---~~~~L~eav~~vkptvLIG~S~~~-g~F 425 (521)
|++ +++||++| ++||+++. +. +.+++++|++... ...+|.|+++. +|+|||+|+.+ |.|
T Consensus 209 --G~~----~~~I~vvd~~~~R~G~~~~a--~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~--aDVlInaT~~~~G~~ 278 (439)
T 2dvm_A 209 --GVK----PENVRVVELVNGKPRILTSD--LDLEKLFPYRGWLLKKTNGENIEGGPQEALKD--ADVLISFTRPGPGVI 278 (439)
T ss_dssp --TCC----GGGEEEEEEETTEEEECCTT--SCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT--CSEEEECSCCCSSSS
T ss_pred --CCC----cCeEEEEEccCCCcCccccc--cchhHHHHHHHHHhhccccccccccHHHHhcc--CCEEEEcCCCccCCC
Confidence 765 37899999 99999887 24 7788888987533 25689999987 99999999985 899
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEeccccccceeechhhhHHHHH
Q 009982 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVPGQANNAYIFPGFGLGLVI 505 (521)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p~Q~NN~~iFPGiglG~l~ 505 (521)
++++++.|+ ++||||+||||+ +||++++|++| |++++||| +++.|+|+||+|+|||||+|+++
T Consensus 279 ~~e~v~~m~---~~~iVfDLynP~--~t~~~~~A~~~--G~~ivatG----------~~ml~~Q~nn~~~FPGi~~g~l~ 341 (439)
T 2dvm_A 279 KPQWIEKMN---EDAIVFPLANPV--PEILPEEAKKA--GARIVATG----------RSDYPNQINNLLGFPGIFRGALD 341 (439)
T ss_dssp CHHHHTTSC---TTCEEEECCSSS--CSSCHHHHHHH--TCSEECBS----------CSSSSSBCCGGGTHHHHHHHHHH
T ss_pred ChHHHHhcC---CCCEEEECCCCC--CcchHHHHHHc--CCeEEcCC----------CchhHHHHHHHhcccCchHHHHh
Confidence 999999886 899999999999 89999999998 89999999 58999999999999999999999
Q ss_pred hCCCccCHHHHHhhcC
Q 009982 506 SGAIRVHDDMLLAACK 521 (521)
Q Consensus 506 ~~a~~Itd~M~~aAA~ 521 (521)
++|++|||+|+++||+
T Consensus 342 ~~a~~i~~~m~~aaa~ 357 (439)
T 2dvm_A 342 VRARTITDSMIIAAAK 357 (439)
T ss_dssp TTCSCCCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHH
Confidence 9999999999999984
No 8
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.99 E-value=4.4e-09 Score=111.32 Aligned_cols=169 Identities=11% Similarity=0.176 Sum_probs=125.0
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHH---------------------HHHc-------CCCcee
Q 009982 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELL---------------------AKYG-------TTHLVF 303 (521)
Q Consensus 252 R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL---------------------~ryr-------~~~~~F 303 (521)
-.+-|||...++..+.+ ..++|+.+| |-+..=...+- .||+ -.+|+|
T Consensus 111 g~~~~ey~~~~~~~~~~--~~~~p~~il---DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi 185 (435)
T 3gvp_A 111 GESEDDFWWCIDRCVNV--EGWQPNMIL---DDGGDLTHWIYKKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAM 185 (435)
T ss_dssp TCCHHHHHHHHHHHHCB--TTBCCSEEE---ESSSHHHHHHHHHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEE
T ss_pred CCCHHHHHHHHHHHHhc--cCCCCcEEE---ecchHHHHHHHHHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEE
Confidence 34567888877776642 345677666 44443222221 3443 269999
Q ss_pred ----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEe
Q 009982 304 ----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (521)
Q Consensus 304 ----------nDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (521)
+|+++||+.++++|+..+ ++..|.+.+++|+|+|..|.++|+.+... |. +++++|
T Consensus 186 ~vnds~tK~~fDn~yGt~~s~~~gi~ra---t~~~L~GktV~ViG~G~IGk~vA~~Lra~-----Ga-------~Viv~D 250 (435)
T 3gvp_A 186 NVNDSVTKQKFDNLYCCRESILDGLKRT---TDMMFGGKQVVVCGYGEVGKGCCAALKAM-----GS-------IVYVTE 250 (435)
T ss_dssp ECTTCHHHHHHHTHHHHHHHHHHHHHHH---HCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEC
T ss_pred EecchhhhhhhhhhhhhHHHHHHHHHHh---hCceecCCEEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEe
Confidence 899999999999999765 69999999999999999999999988642 64 588888
Q ss_pred cCCccccCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCC
Q 009982 374 SKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQS 452 (521)
Q Consensus 374 s~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~ 452 (521)
++.. +...|.. .-...+|.|+++. .|++|.+++..++++++.++.|. +..||+-.+++. .
T Consensus 251 ~dp~------------ra~~A~~~G~~v~~Leeal~~--ADIVi~atgt~~lI~~e~l~~MK---~gailINvgrg~--~ 311 (435)
T 3gvp_A 251 IDPI------------CALQACMDGFRLVKLNEVIRQ--VDIVITCTGNKNVVTREHLDRMK---NSCIVCNMGHSN--T 311 (435)
T ss_dssp SCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCHHHHHHSC---TTEEEEECSSTT--T
T ss_pred CChh------------hhHHHHHcCCEeccHHHHHhc--CCEEEECCCCcccCCHHHHHhcC---CCcEEEEecCCC--c
Confidence 7431 1111211 1123579999987 99999998888999999999997 789999999997 7
Q ss_pred CCCHHHH
Q 009982 453 ECTAEEA 459 (521)
Q Consensus 453 Ectpe~A 459 (521)
|+..+..
T Consensus 312 EId~~~L 318 (435)
T 3gvp_A 312 EIDVASL 318 (435)
T ss_dssp TBTGGGG
T ss_pred cCCHHHH
Confidence 8887654
No 9
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.93 E-value=3.1e-09 Score=112.49 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=105.0
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 009982 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (521)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~ 367 (521)
..+|+| +|++.||+.++++|++. .++..|.+.+++|+|.|..|.++|+.+... |.
T Consensus 171 L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~r---atg~~L~GktVgIiG~G~IG~~vA~~Lka~-----Ga------- 235 (436)
T 3h9u_A 171 LTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKR---ATDVMIAGKTACVCGYGDVGKGCAAALRGF-----GA------- 235 (436)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHHH---HHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceEeechhhhhhhhhccccchHHHHHHHHH---hcCCcccCCEEEEEeeCHHHHHHHHHHHHC-----CC-------
Confidence 589999 89999999999999964 569999999999999999999999998653 53
Q ss_pred cEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+++++|++.. +...|. ..-...+|.|+++. +|++|.+++..++++++.++.|. +..||+-+|
T Consensus 236 ~Viv~D~~p~------------~a~~A~~~G~~~~sL~eal~~--ADVVilt~gt~~iI~~e~l~~MK---~gAIVINvg 298 (436)
T 3h9u_A 236 RVVVTEVDPI------------NALQAAMEGYQVLLVEDVVEE--AHIFVTTTGNDDIITSEHFPRMR---DDAIVCNIG 298 (436)
T ss_dssp EEEEECSCHH------------HHHHHHHTTCEECCHHHHTTT--CSEEEECSSCSCSBCTTTGGGCC---TTEEEEECS
T ss_pred EEEEECCChh------------hhHHHHHhCCeecCHHHHHhh--CCEEEECCCCcCccCHHHHhhcC---CCcEEEEeC
Confidence 5888887421 111111 11123589999997 99999988888899999999996 789999999
Q ss_pred CCCCCCCCCHHHHhc
Q 009982 447 NPTSQSECTAEEAYT 461 (521)
Q Consensus 447 NPt~~~Ectpe~A~~ 461 (521)
++. .|+.++.+.+
T Consensus 299 Rg~--vEID~~~L~~ 311 (436)
T 3h9u_A 299 HFD--TEIQVAWLKA 311 (436)
T ss_dssp SSG--GGBCHHHHHH
T ss_pred CCC--CccCHHHHHh
Confidence 997 8999987643
No 10
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.50 E-value=4.4e-08 Score=101.93 Aligned_cols=218 Identities=18% Similarity=0.249 Sum_probs=130.0
Q ss_pred CcchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--ccccchhhhhHHhhhcCCCCCceeeEEEecCCCccccccCc
Q 009982 166 EKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTNNEQLLKDE 243 (521)
Q Consensus 166 d~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp 243 (521)
.+..++++.+ .+.+|+|.++++..+|++|.+.. |+.|+.+ ..+|. | +++|.+.+ |
T Consensus 26 tP~~v~~L~~----~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~-~~~~~-a---------diil~vk~--------p 82 (401)
T 1x13_A 26 TPKTVEQLLK----LGFTVAVESGAGQLASFDDKAFVQAGAEIVEG-NSVWQ-S---------EIILKVNA--------P 82 (401)
T ss_dssp CHHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHHTCEEECG-GGGGS-S---------SEEECSSC--------C
T ss_pred CHHHHHHHHH----CCCEEEEEECCCcccCCChHHHHHCCCEEecc-HHHhc-C---------CeEEEeCC--------C
Confidence 3445555554 34689999999999999999875 7888888 66776 2 57776643 2
Q ss_pred ccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCC-CccHHHHHHHHcCCCceec-cCCC----------chH
Q 009982 244 FYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFA-NHNAFELLAKYGTTHLVFN-DDIQ----------GTA 311 (521)
Q Consensus 244 ~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~-~~~af~iL~ryr~~~~~Fn-DDiQ----------GTa 311 (521)
..+.++.+++ ...+|.+=..+ ++.+++-+.+ ..+++|+ +.+. .+.
T Consensus 83 ------------------~~~~i~~l~~---~~~li~~~~~~~d~~~~~al~~--~gI~v~~~e~v~~~~~a~~l~~l~~ 139 (401)
T 1x13_A 83 ------------------LDDEIALLNP---GTTLVSFIWPAQNPELMQKLAE--RNVTVMAMDSVPRISRAQSLDALSS 139 (401)
T ss_dssp ------------------CHHHHTTCCT---TCEEEECCCGGGCHHHHHHHHH--TTCEEEEGGGCCCSGGGGGGCHHHH
T ss_pred ------------------CHHHHHHhcC---CCcEEEEecCCCCHHHHHHHHH--CCCEEEEeehhhhhhhhcccchHHH
Confidence 1233333322 11122221111 3333333333 4677773 2222 455
Q ss_pred HHHHHHHHHHHHHh----CC----------CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 312 SVVLAGVVAALKLI----GG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 312 aV~LAgll~Alk~~----g~----------~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
...+|| .+|++.. ++ .+...+|+|+|+|.+|.++++++... |. +++++|++.-
T Consensus 140 ~a~~ag-~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~v~D~~~~ 206 (401)
T 1x13_A 140 MANIAG-YRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSL-----GA-------IVRAFDTRPE 206 (401)
T ss_dssp HHHHHH-HHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCGG
T ss_pred HHHHHH-HHHHHHHHHhcccccCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCHH
Confidence 556665 3444432 22 26689999999999999999987543 52 5889998653
Q ss_pred cccCCccCCch------------hchhhccccCC------CCCHHHHhcccCCcEEEEccCCC-----CCCCHHHHHHHH
Q 009982 378 IVSSRKDSLQH------------FKKPWAHEHEP------VNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMA 434 (521)
Q Consensus 378 i~~~R~~~l~~------------~k~~fa~~~~~------~~~L~eav~~vkptvLIG~S~~~-----g~Ft~evv~~Ma 434 (521)
..... ..+.. .+..|++.... ..+|.+.++. .|++|++...+ .++++++++.|.
T Consensus 207 ~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~--aDvVI~~~~~pg~~ap~li~~~~l~~mk 283 (401)
T 1x13_A 207 VKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKE--VDIIVTTALIPGKPAPKLITREMVDSMK 283 (401)
T ss_dssp GHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHH--CSEEEECCCCTTSCCCCCBCHHHHHTSC
T ss_pred HHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 21100 00100 00011111000 0147788876 99999995333 679999999996
Q ss_pred cCCCCcEEEEcCCC
Q 009982 435 SFNEKPLILALSNP 448 (521)
Q Consensus 435 ~~~erPIIFaLSNP 448 (521)
+..+|+-+|+|
T Consensus 284 ---~g~vIVdva~~ 294 (401)
T 1x13_A 284 ---AGSVIVDLAAQ 294 (401)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCcEEEEEcCC
Confidence 68899999987
No 11
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.06 E-value=8.8e-06 Score=87.39 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=101.3
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 009982 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (521)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~ 367 (521)
-.+|+| .|+++||+..++.|+. |.++..|.+.+++|.|+|..|.++|+.+... |.
T Consensus 225 L~iPvinvnDs~tK~~fDn~yGt~~sl~dgi~---r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~-----GA------- 289 (488)
T 3ond_A 225 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVAGYGDVGKGCAAALKQA-----GA------- 289 (488)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCceecccchhhhhHhhhhccccHHHHHHHH---HHcCCcccCCEEEEECCCHHHHHHHHHHHHC-----CC-------
Confidence 379999 7899999999999886 7889999999999999999999998888653 63
Q ss_pred cEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 368 KICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+++++|++.. + .... +...-...++.++++. .|+++-.++..++++.+.++.|. +..||+-.++
T Consensus 290 ~Viv~D~~~~----~---a~~A----a~~g~dv~~lee~~~~--aDvVi~atG~~~vl~~e~l~~mk---~gaiVvNaG~ 353 (488)
T 3ond_A 290 RVIVTEIDPI----C---ALQA----TMEGLQVLTLEDVVSE--ADIFVTTTGNKDIIMLDHMKKMK---NNAIVCNIGH 353 (488)
T ss_dssp EEEEECSCHH----H---HHHH----HHTTCEECCGGGTTTT--CSEEEECSSCSCSBCHHHHTTSC---TTEEEEESSS
T ss_pred EEEEEcCCHH----H---HHHH----HHhCCccCCHHHHHHh--cCEEEeCCCChhhhhHHHHHhcC---CCeEEEEcCC
Confidence 6888887421 1 1000 0111123467787776 99999988888899999999886 7889999999
Q ss_pred CCCCCCCCHHHHhcc
Q 009982 448 PTSQSECTAEEAYTW 462 (521)
Q Consensus 448 Pt~~~Ectpe~A~~w 462 (521)
+. .|+..++.-.|
T Consensus 354 ~~--~Ei~~~~l~~~ 366 (488)
T 3ond_A 354 FD--NEIDMLGLETH 366 (488)
T ss_dssp TT--TTBTHHHHHTS
T ss_pred CC--cccchHHHHHh
Confidence 85 78888766554
No 12
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.01 E-value=2.4e-05 Score=83.45 Aligned_cols=138 Identities=16% Similarity=0.211 Sum_probs=102.8
Q ss_pred CCCcee----------ccCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcC
Q 009982 298 TTHLVF----------NDDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRK 367 (521)
Q Consensus 298 ~~~~~F----------nDDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~ 367 (521)
-.+|+| .|+..||+-.++.|+. |.+|..|.+.+++|+|.|..|.++|+.+... |+
T Consensus 207 L~~PvinVnds~tK~~fDn~yG~~eslvdgI~---Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf-----Ga------- 271 (464)
T 3n58_A 207 LPFPAINVNDSVTKSKFDNKYGCKESLVDGIR---RGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA-----GA------- 271 (464)
T ss_dssp CCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH---HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------
T ss_pred CCCCEEeeccHhhhhhhhhhhcchHHHHHHHH---HhcCCcccCCEEEEECcCHHHHHHHHHHHHC-----CC-------
Confidence 379999 6778999999888885 5679999999999999999999999988542 53
Q ss_pred cEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 368 KICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 368 ~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+++++|.+.. ....|. ..-...+|.|+++. .|+++-+++..++++++.++.|. +..||.-.+
T Consensus 272 ~Viv~d~dp~------------~a~~A~~~G~~vv~LeElL~~--ADIVv~atgt~~lI~~e~l~~MK---~GAILINvG 334 (464)
T 3n58_A 272 RVKVTEVDPI------------CALQAAMDGFEVVTLDDAAST--ADIVVTTTGNKDVITIDHMRKMK---DMCIVGNIG 334 (464)
T ss_dssp EEEEECSSHH------------HHHHHHHTTCEECCHHHHGGG--CSEEEECCSSSSSBCHHHHHHSC---TTEEEEECS
T ss_pred EEEEEeCCcc------------hhhHHHhcCceeccHHHHHhh--CCEEEECCCCccccCHHHHhcCC---CCeEEEEcC
Confidence 6888876321 011111 11123479999987 99999988878899999999996 788888888
Q ss_pred CCCCCCCCCHHHH--------------hcccCCcEEE
Q 009982 447 NPTSQSECTAEEA--------------YTWSKGRAIF 469 (521)
Q Consensus 447 NPt~~~Ectpe~A--------------~~wt~G~aif 469 (521)
+.. .|+..+.. |.|.+|+.|+
T Consensus 335 Rgd--vEID~~aL~~~~~~~ik~~v~~~~~~~g~~i~ 369 (464)
T 3n58_A 335 HFD--NEIQVAALRNLKWTNVKPQVDLIEFPDGKRLI 369 (464)
T ss_dssp SST--TTBTCGGGTTSEEEEEETTEEEEECTTSCEEE
T ss_pred CCC--cccCHHHHHhCccccccCCeeEEEeCCCCEEE
Confidence 776 45544333 4445777665
No 13
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.42 E-value=0.0005 Score=70.60 Aligned_cols=225 Identities=15% Similarity=0.150 Sum_probs=122.7
Q ss_pred cchHHHHHhcCCCCCeeEEEEecCceeeccCCCCCC--ccccchhhhhHHhhhcCCCCCceeeEEEecCCC-----cccc
Q 009982 167 KGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQ--GMGIPVGKLALYTALGGIRPSACLPITVDVGTN-----NEQL 239 (521)
Q Consensus 167 ~g~i~~~l~nwp~~~v~viVVTDG~rILGLGDlG~~--GmgI~~GKl~Ly~a~gGI~P~~~lPI~LDvGTn-----ne~L 239 (521)
+..++++.+ .+.+|+|.++++...|+.|.... |..|+.++..++ ++.| |+|.+.+. .++.
T Consensus 20 P~~v~~L~~----~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~---~~ad------iil~v~~p~~~~~~~~~ 86 (384)
T 1l7d_A 20 PEVVKKLVG----LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQAL---SQAD------VVWKVQRPMTAEEGTDE 86 (384)
T ss_dssp HHHHHHHHH----TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHH---SSCS------EEEEEECCCCGGGSCCG
T ss_pred HHHHHHHHh----CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhh---cCCC------EEEEecCcccccCCHHH
Confidence 344555544 35789999999999999998764 778887776665 3333 67766543 1111
Q ss_pred ---c-cCcccccccccCCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceeccCCCchHHHHH
Q 009982 240 ---L-KDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVL 315 (521)
Q Consensus 240 ---L-~Dp~YlG~r~~R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~FnDDiQGTaaV~L 315 (521)
+ ..-.+++.-+.- ++. +.++++.+ -|- .++.+|-+....+ ...+++|+ ....+
T Consensus 87 i~~l~~~~~~i~~~~~~-----~~~---~~~~~~~~-~gi-~~~~~e~~~~~~~-------~~~l~~l~------~~a~~ 143 (384)
T 1l7d_A 87 VALIKEGAVLMCHLGAL-----TNR---PVVEALTK-RKI-TAYAMELMPRISR-------AQSMDILS------SQSNL 143 (384)
T ss_dssp GGGSCTTCEEEEECCGG-----GCH---HHHHHHHH-TTC-EEEEGGGCCCSGG-------GGGGCHHH------HHHHH
T ss_pred HHhhccCCEEEEEeccc-----CCH---HHHHHHHH-CCC-EEEEecccccccc-------ccccchhh------HHHHH
Confidence 1 112233333321 111 12233332 111 2233322221100 00122222 11122
Q ss_pred H---HHHHHHHHhCC----------CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCC
Q 009982 316 A---GVVAALKLIGG----------TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (521)
Q Consensus 316 A---gll~Alk~~g~----------~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (521)
| +++.+.+..++ .+...+++|+|+|.+|.++++.+... |. +++++|++.- |
T Consensus 144 ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~-----Ga-------~V~~~d~~~~----~ 207 (384)
T 1l7d_A 144 AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRL-----GA-------VVMATDVRAA----T 207 (384)
T ss_dssp HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCST----T
T ss_pred HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCHH----H
Confidence 3 55666665553 67899999999999999999887542 62 4899998632 1
Q ss_pred ccCCchhch-----------------hhccccC------CCCCHHHHhcccCCcEEEEcc---C--CCCCCCHHHHHHHH
Q 009982 383 KDSLQHFKK-----------------PWAHEHE------PVNNLLDAVKVIKPTILIGSS---G--VGRTFTKEVIEAMA 434 (521)
Q Consensus 383 ~~~l~~~k~-----------------~fa~~~~------~~~~L~eav~~vkptvLIG~S---~--~~g~Ft~evv~~Ma 434 (521)
.+.+...-. .|++... ....|.+.++. .|++|.++ + .+.+++++.++.|.
T Consensus 208 ~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~--aDvVi~~~~~pg~~~~~li~~~~l~~mk 285 (384)
T 1l7d_A 208 KEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVK--TDIAITTALIPGKPAPVLITEEMVTKMK 285 (384)
T ss_dssp HHHHHHTTCEECCC-----------------------CCHHHHHHHHHTT--CSEEEECCCCTTSCCCCCSCHHHHTTSC
T ss_pred HHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCC--CCEEEECCccCCCCCCeeeCHHHHhcCC
Confidence 110100000 1111100 00127777775 99999988 3 23468999999996
Q ss_pred cCCCCcEEEEcCCC
Q 009982 435 SFNEKPLILALSNP 448 (521)
Q Consensus 435 ~~~erPIIFaLSNP 448 (521)
+..+|+-+|-+
T Consensus 286 ---~g~vivdva~~ 296 (384)
T 1l7d_A 286 ---PGSVIIDLAVE 296 (384)
T ss_dssp ---TTCEEEETTGG
T ss_pred ---CCCEEEEEecC
Confidence 67899999864
No 14
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.41 E-value=0.00015 Score=76.24 Aligned_cols=110 Identities=17% Similarity=0.218 Sum_probs=72.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc--------------hhchhh
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ--------------HFKKPW 393 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~--------------~~k~~f 393 (521)
.+...||+|+|+|.+|..+|+++... |. +++++|++.-......+ +. +-+..|
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~~~-~G~~~~~~~~~~~~d~~~~~~y 253 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRL-----GA-------VVSATDVRPAAKEQVAS-LGAKFIAVEDEEFKAAETAGGY 253 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSTTHHHHHHH-TTCEECCCCC------------
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEcCCHHHHHHHHH-cCCceeecccccccccccccch
Confidence 46789999999999999999988653 53 68999997532111100 10 001124
Q ss_pred ccccCC------CCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCC
Q 009982 394 AHEHEP------VNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSN-PTSQSECT 455 (521)
Q Consensus 394 a~~~~~------~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ect 455 (521)
++...+ ..+|.|+++. .|++|++... +.+||+|+++.|. +.+||+-+|- |-...|.|
T Consensus 254 a~e~s~~~~~~~~~~l~e~l~~--aDVVI~tvlipg~~ap~Lvt~emv~~Mk---~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 254 AKEMSGEYQVKQAALVAEHIAK--QDIVITTALIPGRPAPRLVTREMLDSMK---PGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp -----CHHHHHHHHHHHHHHHT--CSEEEECCCCSSSCCCCCBCHHHHTTSC---TTCEEEETTGGGTCSBTTC
T ss_pred hhhcchhhhhhhHhHHHHHhcC--CCEEEECCcCCCCCCCEEecHHHHhcCC---CCCEEEEEeCCCCCCcccc
Confidence 432111 2479999987 9999998533 4589999999997 7999999994 33345554
No 15
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.24 E-value=0.00041 Score=72.44 Aligned_cols=102 Identities=22% Similarity=0.184 Sum_probs=67.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCC-------c---hhchhhccc--
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-------Q---HFKKPWAHE-- 396 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l-------~---~~k~~fa~~-- 396 (521)
+...|++|+|+|.+|..+|+.+... |. +++++|++.-....- +.+ . .....|++.
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l-----Ga-------~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~ 248 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL-----GA-------KTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELS 248 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH-----TC-------EEEEECSSGGGHHHH-HHTTCEECCCC-------------C
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhh
Confidence 6789999999999999999988654 53 589999874211100 000 0 000112211
Q ss_pred ----cCCCCCHHHHhcccCCcEEEEccCC-----CCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 397 ----HEPVNNLLDAVKVIKPTILIGSSGV-----GRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 397 ----~~~~~~L~eav~~vkptvLIG~S~~-----~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
.....+|.++++. .|++|++... +.+||+|+++.|. +..+|+-+|=+
T Consensus 249 ~~~~~~~~~~l~e~l~~--aDIVI~tv~iPg~~ap~Lvt~emv~~Mk---pGsVIVDvA~d 304 (381)
T 3p2y_A 249 EAERAQQQQALEDAITK--FDIVITTALVPGRPAPRLVTAAAATGMQ---PGSVVVDLAGE 304 (381)
T ss_dssp HHHHHHHHHHHHHHHTT--CSEEEECCCCTTSCCCCCBCHHHHHTSC---TTCEEEETTGG
T ss_pred HHHHhhhHHHHHHHHhc--CCEEEECCCCCCcccceeecHHHHhcCC---CCcEEEEEeCC
Confidence 0112468899987 9999997433 3579999999997 78999999854
No 16
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=96.99 E-value=0.0071 Score=63.88 Aligned_cols=186 Identities=15% Similarity=0.128 Sum_probs=127.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---C--Ccee----------ccCCCchHHHHH
Q 009982 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (521)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (521)
.+-.|-..|...|++++.+.-||..-|-=+|+...-. --+.+.|+. . -.++ .+.-.-||-=+.
T Consensus 123 ~s~~El~r~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 202 (419)
T 3aoe_E 123 LSPQELERLVRRYTAELVGLIGPDSDILGPDLGADQQVMAWIMDTYSMTVGSTVPGVVTGKPHALGGSEGRDDAAGLGAL 202 (419)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCBTTTEEEEEBTTBCHHHHHHHHHHHHHHHTSCCGGGBSSCCGGGTCCSSCSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeeeccchhcCCCCCCccchHHHHH
Confidence 3456677789999999999999999999999987522 224556631 1 1222 233345777677
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecCCccccCCccCCchhc-hhh
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPW 393 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k-~~f 393 (521)
-++-.+++..|.+|++.||+|-|.|..|...|++|.+. | -+++ +.|++|-|+.... ++..+ +.+
T Consensus 203 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~~a~~L~~~-----G-------akVVavsD~~G~i~dp~G--ld~~~l~~~ 268 (419)
T 3aoe_E 203 LVLEALAKRRGLDLRGARVVVQGLGQVGAAVALHAERL-----G-------MRVVAVATSMGGMYAPEG--LDVAEVLSA 268 (419)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEEETTEEEECTTC--CCHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEcCCCeEECCCC--CCHHHHHHH
Confidence 77888899999999999999999999999999988753 5 3566 9999999998643 33221 111
Q ss_pred ccccCCCC----CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009982 394 AHEHEPVN----NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (521)
Q Consensus 394 a~~~~~~~----~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~A~~ 461 (521)
........ +-.+ +-.++.|||+=++. ++.+|++-.+.+ .-.||.--+| |++ +| +++.+.
T Consensus 269 ~~~~g~v~~~~~~~~e-~~~~~~DVliP~A~-~n~i~~~~A~~l----~ak~V~EgAN~p~t-~~--A~~~L~ 332 (419)
T 3aoe_E 269 YEATGSLPRLDLAPEE-VFGLEAEVLVLAAR-EGALDGDRARQV----QAQAVVEVANFGLN-PE--AEAYLL 332 (419)
T ss_dssp HHHHSSCSCCCBCTTT-GGGSSCSEEEECSC-TTCBCHHHHTTC----CCSEEEECSTTCBC-HH--HHHHHH
T ss_pred HHhhCCcceeeccchh-hhccCceEEEeccc-ccccccchHhhC----CceEEEECCCCcCC-HH--HHHHHH
Confidence 11111110 1122 34578999998876 679999998887 4679999999 653 44 445544
No 17
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.95 E-value=0.012 Score=62.22 Aligned_cols=178 Identities=19% Similarity=0.182 Sum_probs=126.7
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc-HHH-HHHHHcC---C--Ccee----------ccCCCchHHHHH
Q 009982 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN-AFE-LLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (521)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~-af~-iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (521)
.+-.|-..|...|+.++.+.-||+.-|-=+|+...- -.. +.+.|+. . -.++ .|--.-||-=+.
T Consensus 126 ~s~~El~r~~r~f~~~l~~~iG~~~dipApDvgt~~~~m~~~~~~y~~~~g~~~~~~vTGkp~~~GGs~~r~~aTg~Gv~ 205 (424)
T 3k92_A 126 MSFGELERLSRGYVRAISQIVGPTKDIPAPDVYTNSQIMAWMMDEYSRLREFDSPGFITGKPLVLGGSQGRETATAQGVT 205 (424)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCccCCcCCCCHHHHHHHHHHHHHHhCCCCcceeecccccCCCcCCCcccHHHHHH
Confidence 345666778899999999999998888889997632 222 4566642 1 1222 334456888888
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhc-hhhc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK-KPWA 394 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k-~~fa 394 (521)
.++-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +-+-+.|++|-|+.... |+... +.+.
T Consensus 206 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~aa~~l~e~-----Ga------kVVavsD~~G~iyd~~G--lD~~~l~~~~ 272 (424)
T 3k92_A 206 ICIEEAVKKKGIKLQNARIIIQGFGNAGSFLAKFMHDA-----GA------KVIGISDANGGLYNPDG--LDIPYLLDKR 272 (424)
T ss_dssp HHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHH-----TC------EEEEEECSSCEEECTTC--CCHHHHHHHC
T ss_pred HHHHHHHHHcCCCcccCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCCC--CCHHHHHHHH
Confidence 88999999999999999999999999999999999764 53 44679999999997642 43221 1121
Q ss_pred cccC-------CCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 395 HEHE-------PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 395 ~~~~-------~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
.... ..-+-.+ +-.++.||||=+..+ +.+|++-++.+ .-.+|.--+| |+
T Consensus 273 ~~~g~i~~~~a~~~~~~~-i~~~~~DIliPcA~~-n~I~~~~a~~l----~ak~V~EgAN~p~ 329 (424)
T 3k92_A 273 DSFGMVTNLFTDVITNEE-LLEKDCDILVPAAIS-NQITAKNAHNI----QASIVVERANGPT 329 (424)
T ss_dssp CSSSCCGGGCSCCBCHHH-HHHSCCSEEEECSCS-SCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred HHhCCCCCCCcEEecCcc-ceeccccEEeecCcc-cccChhhHhhc----CceEEEcCCCCCC
Confidence 1111 1112233 335689999988875 79999988887 5789998898 65
No 18
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.91 E-value=0.054 Score=57.78 Aligned_cols=183 Identities=16% Similarity=0.110 Sum_probs=126.2
Q ss_pred CCChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH-----HHHHHHHcCC-Ccee----------ccCCCchHHHHH
Q 009982 252 RATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA-----FELLAKYGTT-HLVF----------NDDIQGTASVVL 315 (521)
Q Consensus 252 R~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a-----f~iL~ryr~~-~~~F----------nDDiQGTaaV~L 315 (521)
..+..|-..|...||..+.+..||+.=|--.|+...-. +...++++.. -.|| .+.-.-||-=+.
T Consensus 140 ~~s~~El~R~~~~f~~eL~~~iG~d~dvpa~Dig~~~~em~~~~~~y~~~~~~~~~v~TGk~~~~GGs~~r~~aTg~Gv~ 219 (450)
T 4fcc_A 140 GKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLV 219 (450)
T ss_dssp TCCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTCCSCCCSSCCGGGTCCTTTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhheecCCCCCCccceeecchhhhhhhhhhhhccCCCceeecCCCcccCCCCCCCCceeeeHH
Confidence 34667788899999999999999999999999975332 2233344332 2233 233344777778
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
-++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+-+.|++|-|+... .++..+.....
T Consensus 220 ~~~~~~~~~~~~~l~Gk~vaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~i~d~~--Gid~e~l~~l~ 286 (450)
T 4fcc_A 220 YFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEF-----GA------RVITASDSSGTVVDES--GFTKEKLARLI 286 (450)
T ss_dssp HHHHHHHHHTTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEEETTEEEECTT--CCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCCEEEEeCCChHHHHHHHHHHhc-----CC------eEEEEecCCceEEeCC--CCCHHHHHHHH
Confidence 88889999999999999999999999999999999764 53 4566789999998754 34433221111
Q ss_pred c--cCCCCCHHH-------------HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 396 E--HEPVNNLLD-------------AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 396 ~--~~~~~~L~e-------------av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
+ ....+.+.+ .+-.++.|||+=+..+ +.+|++-++.+.+. .-.+|.-=+| |+
T Consensus 287 e~k~~~~g~v~~~~~~~g~~~~~~~~i~~~~~DI~iPcAl~-~~I~~~~a~~L~a~-g~k~IaEgAN~p~ 354 (450)
T 4fcc_A 287 EIKSSRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQ-NELDVDAAHQLIAN-GVKAVAEGANMPT 354 (450)
T ss_dssp HHHTSTTCCHHHHHHHHTCEEEETCCGGGSCCSEEEECSCT-TCBCHHHHHHHHHT-TCCEEECCSSSCB
T ss_pred HHhcccCCccccccccCCcEEecCcccccCCccEEeecccc-ccccHHHHHHHHhc-CceEEecCCCCCC
Confidence 0 000011111 1234689999988874 69999999999632 2357877788 65
No 19
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.75 E-value=0.0086 Score=58.95 Aligned_cols=123 Identities=15% Similarity=0.182 Sum_probs=82.2
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (521)
.+-+|+=.++..++...+..|.+.+++|+|+|..|..+|+.+... |. +++++|+.. .+ +..
T Consensus 133 ~~~svae~a~~~~l~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~dr~~----~~---~~~ 193 (293)
T 3d4o_A 133 NSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFAAL-----GA-------KVKVGARES----DL---LAR 193 (293)
T ss_dssp HHHHHHHHHHHHHHHHCSSCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHH
T ss_pred ccHhHHHHHHHHHHHhcCCCCCCCEEEEEeeCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHH
Confidence 344555556666667778899999999999999999999988542 53 688888752 11 111
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCCCCCCCCHHHHh
Q 009982 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPTSQSECTAEEAY 460 (521)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt~~~Ectpe~A~ 460 (521)
.+ .+--..-...+|.+.++. .|++|-... .+.++++.++.|. +..+++=+| +|. ++..+.|.
T Consensus 194 ~~-~~g~~~~~~~~l~~~l~~--aDvVi~~~p-~~~i~~~~l~~mk---~~~~lin~ar~~~---~~~~~~a~ 256 (293)
T 3d4o_A 194 IA-EMGMEPFHISKAAQELRD--VDVCINTIP-ALVVTANVLAEMP---SHTFVIDLASKPG---GTDFRYAE 256 (293)
T ss_dssp HH-HTTSEEEEGGGHHHHTTT--CSEEEECCS-SCCBCHHHHHHSC---TTCEEEECSSTTC---SBCHHHHH
T ss_pred HH-HCCCeecChhhHHHHhcC--CCEEEECCC-hHHhCHHHHHhcC---CCCEEEEecCCCC---CCCHHHHH
Confidence 00 010000012468888876 999997664 5799999999885 567888888 453 45555543
No 20
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.48 E-value=0.0049 Score=62.59 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=78.9
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (521)
+-.-+|-.|++-.++..+.+++..++||+|+| ..|.-+|.++... | ..+.+|+++
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 198 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWN-----N-------ATVTTCHSK------------ 198 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----T-------CEEEEECTT------------
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEECC------------
Confidence 44567888899999999999999999999999 5799999888653 4 358888743
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 199 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~ 239 (301)
T 1a4i_A 199 ------------TAHLDEEVNK--GDILVVATGQPEMVKGEWIK------PGAIVIDCGIN 239 (301)
T ss_dssp ------------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCCB
T ss_pred ------------cccHHHHhcc--CCEEEECCCCcccCCHHHcC------CCcEEEEccCC
Confidence 2468999987 99999999999999999985 45677777754
No 21
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.47 E-value=0.036 Score=58.91 Aligned_cols=188 Identities=16% Similarity=0.147 Sum_probs=126.8
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHcC---C--Ccee----------ccCCCchHHHHH
Q 009982 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYGT---T--HLVF----------NDDIQGTASVVL 315 (521)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr~---~--~~~F----------nDDiQGTaaV~L 315 (521)
.+..|-..|...|+.++.+.-||..-|-=+|+...- ---+.+.|+. . -.++ ++.-.-||-=+.
T Consensus 140 ~s~~Eler~~r~f~~~l~~~iGp~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~vTGkp~~~GGs~~r~~aTg~Gv~ 219 (440)
T 3aog_A 140 LSPGELERLTRRYTSEIGILLGPDRDIPAPDVNTGEREMAWMMDTYSMNVGRTVPGVVTGKPIALGGSLGRRDATGRGVF 219 (440)
T ss_dssp SCHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTCTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCeEeccchhhCCCCCCCcchHHHHH
Confidence 344566788999999999999998888899998741 1224556631 1 1222 233345766667
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecCCccccCCccC---Cchhch
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDS---LQHFKK 391 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~---l~~~k~ 391 (521)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|+....=+ +..++.
T Consensus 220 ~~~~~~~~~~g~~l~g~~vaVqGfGnVG~~~a~~L~e~-----Ga-------kvVavsD~~G~i~dp~Gld~~~l~~~~~ 287 (440)
T 3aog_A 220 ITAAAAAEKIGLQVEGARVAIQGFGNVGNAAARAFHDH-----GA-------RVVAVQDHTGTVYNEAGIDPYDLLRHVQ 287 (440)
T ss_dssp HHHHHHHHHHTCCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEECSSCEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccCCEEEEeccCHHHHHHHHHHHHC-----CC-------EEEEEEcCCcEEECCCCCCHHHHHHHHH
Confidence 77788889999999999999999999999999998763 52 455 999999998865311 222222
Q ss_pred hhcc--ccC--CCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHHHhc
Q 009982 392 PWAH--EHE--PVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEEAYT 461 (521)
Q Consensus 392 ~fa~--~~~--~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~A~~ 461 (521)
.+-. +-. ..-+-.+ +-.++.||||=++. ++.+|.+-++.+ .-.+|.--+| |++ +| +++.+.
T Consensus 288 ~~g~i~~y~~a~~i~~~e-i~~~~~DIlvPcA~-~n~i~~~na~~l----~ak~VvEgAN~p~t-~e--A~~iL~ 353 (440)
T 3aog_A 288 EFGGVRGYPKAEPLPAAD-FWGLPVEFLVPAAL-EKQITEQNAWRI----RARIVAEGANGPTT-PA--ADDILL 353 (440)
T ss_dssp HTSSSTTCTTSEECCHHH-HTTCCCSEEEECSS-SSCBCTTTGGGC----CCSEEECCSSSCBC-HH--HHHHHH
T ss_pred hcCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccchhhHHHc----CCcEEEecCccccC-HH--HHHHHH
Confidence 2110 000 0012334 44578999998877 568999888877 4678888888 653 33 345544
No 22
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=96.47 E-value=0.13 Score=54.89 Aligned_cols=190 Identities=16% Similarity=0.171 Sum_probs=128.5
Q ss_pred CChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHc---CCCc-ee----------ccCCCchHHHHHH
Q 009982 253 ATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTHL-VF----------NDDIQGTASVVLA 316 (521)
Q Consensus 253 ~~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr---~~~~-~F----------nDDiQGTaaV~LA 316 (521)
.+..|...|...||..+.+.+||..=|-=+|++..-. --+.+.|+ ...+ |+ ..--.-||-=+.-
T Consensus 145 ~s~~el~r~~r~f~~eL~~~iGp~~DvpApDvGt~~~em~w~~~~y~~~~~~~~g~vTGKp~~~GGs~~r~~aTg~Gv~~ 224 (456)
T 3r3j_A 145 KSENEILKFCQSFMTNLFRYIGPNTDVPAGDIGVGGREIGYLFGQYKKLKNSFEGVLTGKNIKWGGSNIRAEATGYGVVY 224 (456)
T ss_dssp CCHHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCCSCBSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCCCCHHHHHHHHHHHHhhcCcccceecCCcccccCCCCCCcccchHHHH
Confidence 3456777888889999988889999899999986432 12345554 2221 11 1222346767777
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh----
Q 009982 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP---- 392 (521)
Q Consensus 317 gll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~---- 392 (521)
++-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +=+.+.|++|-|+... .++..+..
T Consensus 225 ~~~~~~~~~g~~l~g~~VaVQG~GnVG~~aa~~L~e~-----Ga------kvVavsD~~G~iyd~~--Gld~~~l~~~~~ 291 (456)
T 3r3j_A 225 FAENVLKDLNDNLENKKCLVSGSGNVAQYLVEKLIEK-----GA------IVLTMSDSNGYILEPN--GFTKEQLNYIMD 291 (456)
T ss_dssp HHHHHHHTTTCCSTTCCEEEECCSHHHHHHHHHHHHH-----TC------CBCCEECSSCEEECTT--CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEECCCCcEECCC--CCCHHHHHHHHH
Confidence 7888888889999999999999999999999999764 53 3345899999998764 34322211
Q ss_pred -----------hccccCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCCCCHHH
Q 009982 393 -----------WAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSECTAEE 458 (521)
Q Consensus 393 -----------fa~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~Ectpe~ 458 (521)
|+...+... +-.+ +-.++.||||=+.. ++.+|++-++.+-+ +.-+||.--+| |++ +| +++
T Consensus 292 ~k~~~~~~v~~~~~~~~~a~~v~~~~-i~~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~T-~e--A~~ 365 (456)
T 3r3j_A 292 IKNNQRLRLKEYLKYSKTAKYFENQK-PWNIPCDIAFPCAT-QNEINENDADLFIQ-NKCKMIVEGANMPTH-IK--ALH 365 (456)
T ss_dssp HHHTSCCCGGGGGGTCSSCEEECSCC-GGGSCCSEEEECSC-TTCBCHHHHHHHHH-HTCCEEECCSSSCBC-TT--HHH
T ss_pred HHHhcCcchhhhhhcCCCceEeCCcc-ccccCccEEEeCCC-ccchhhHHHHHHHh-cCCeEEEecCCCCCC-HH--HHH
Confidence 111000000 1112 33467999998887 57999999999843 24689999999 653 55 556
Q ss_pred Hhc
Q 009982 459 AYT 461 (521)
Q Consensus 459 A~~ 461 (521)
++.
T Consensus 366 iL~ 368 (456)
T 3r3j_A 366 KLK 368 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 23
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.37 E-value=0.0072 Score=60.94 Aligned_cols=92 Identities=18% Similarity=0.284 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh
Q 009982 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (521)
Q Consensus 311 aaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (521)
.-++-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+|+|+
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~hs~-------------- 194 (285)
T 3l07_A 141 ESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNA-----KA-------TVTTCHRF-------------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 4567788899999999999999999999976 899999998753 43 47777653
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 390 k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
..+|.+.++. +|++|...+.++.+|.|+|+ +.-+|+=++
T Consensus 195 ----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 233 (285)
T 3l07_A 195 ----------TTDLKSHTTK--ADILIVAVGKPNFITADMVK------EGAVVIDVG 233 (285)
T ss_dssp ----------CSSHHHHHTT--CSEEEECCCCTTCBCGGGSC------TTCEEEECC
T ss_pred ----------chhHHHhccc--CCEEEECCCCCCCCCHHHcC------CCcEEEEec
Confidence 1368899987 99999999999999999883 455666664
No 24
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.12 E-value=0.047 Score=57.63 Aligned_cols=176 Identities=15% Similarity=0.206 Sum_probs=113.5
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHc---CCC---cee----------ccCCCchHHHHH
Q 009982 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYG---TTH---LVF----------NDDIQGTASVVL 315 (521)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr---~~~---~~F----------nDDiQGTaaV~L 315 (521)
+-.|-..|...|++++.+.-||..-|-=+|+...-. --+.+.|+ ... .++ .+.-.-||-=+.
T Consensus 117 s~~el~r~~r~f~~~l~~~iG~~~dvpA~Dvgt~~~~m~~~~~~y~~~~~~~~~~~~vtGk~~~~GGs~~r~~aTg~Gv~ 196 (421)
T 2yfq_A 117 SERELEQLSRGWVRGLYKYLGDRIDIPAPDVNTNGQIMSWFVDEYVKLNGERMDIGTFTGKPVAFGGSEGRNEATGFGVA 196 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEEECTTCCHHHHHHHHHHHHHHTTTCCCGGGSCSCCGGGTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEECCCCCCCHHHHHHHHHHHHHhhCCCCCCCEEecCchhcCCCCCCCcchHHHHH
Confidence 445667789999999999999999999999997522 23456664 211 222 222334666666
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecC-----CccccCCccCCchh
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSK-----GLIVSSRKDSLQHF 389 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~-----GLi~~~R~~~l~~~ 389 (521)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++ |-|+.... ++..
T Consensus 197 ~~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~~~~~~G~i~d~~G--ld~~ 262 (421)
T 2yfq_A 197 VVVRESAKRFGIKMEDAKIAVQGFGNVGTFTVKNIERQ-----GG-------KVCAIAEWDRNEGNYALYNENG--IDFK 262 (421)
T ss_dssp HHHHHHHHHTTCCGGGSCEEEECCSHHHHHHHHHHHHT-----TC-------CEEECCBCCSSSCSBCCBCSSC--CCHH
T ss_pred HHHHHHHHhcCCCccCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEEecCCCccceEEECCCC--CCHH
Confidence 67788889999999999999999999999999998763 53 455 89999 99998653 3321
Q ss_pred c-hhhccccCCC------C--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 390 K-KPWAHEHEPV------N--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 390 k-~~fa~~~~~~------~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
. +.+......+ . +-.+ +-.++.||||=+.. ++.+|++-.+.+ .-.+|.--+| |+
T Consensus 263 ~l~~~~~~~g~i~~~~~a~~i~~~~-~~~~~~DIliP~A~-~n~i~~~~A~~l----~ak~VvEgAN~P~ 326 (421)
T 2yfq_A 263 ELLAYKEANKTLIGFPGAERITDEE-FWTKEYDIIVPAAL-ENVITGERAKTI----NAKLVCEAANGPT 326 (421)
T ss_dssp HHHHHHHHHCC----------------------CEEECSC-SSCSCHHHHTTC----CCSEEECCSSSCS
T ss_pred HHHHHHHhcCCcccCCCceEeCccc-hhcCCccEEEEcCC-cCcCCcccHHHc----CCeEEEeCCcccc
Confidence 1 1111111111 0 1112 33457888887765 568888888776 4567777777 54
No 25
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.12 E-value=0.012 Score=59.38 Aligned_cols=96 Identities=17% Similarity=0.256 Sum_probs=77.2
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 009982 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (521)
Q Consensus 310 TaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (521)
-.-++-.|++..++-.+.+|++.++|++|+|. .|..+|.+|... |. .+.+|+++
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~-----gA-------tVtv~h~~------------- 193 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNA-----GA-------TVSVCHIK------------- 193 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------------
Confidence 45678888999999999999999999999876 899999998763 43 47788752
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 009982 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 449 (521)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (521)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.
T Consensus 194 -----------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~~~ 236 (285)
T 3p2o_A 194 -----------TKDLSLYTRQ--ADLIIVAAGCVNLLRSDMVK------EGVIVVDVGINRL 236 (285)
T ss_dssp -----------CSCHHHHHTT--CSEEEECSSCTTCBCGGGSC------TTEEEEECCCEEC
T ss_pred -----------chhHHHHhhc--CCEEEECCCCCCcCCHHHcC------CCeEEEEeccCcc
Confidence 1368899987 99999999999999999984 455776664 443
No 26
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=96.12 E-value=0.078 Score=56.86 Aligned_cols=179 Identities=15% Similarity=0.162 Sum_probs=121.1
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---C-Ccee----------ccCCCchHHHHHHH
Q 009982 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---T-HLVF----------NDDIQGTASVVLAG 317 (521)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~-~~~F----------nDDiQGTaaV~LAg 317 (521)
+..|...|...||..+.+..||..=|-=+|++..-. --+.+.|+. . ..|+ .++-.-||-=+.-+
T Consensus 159 S~~El~r~~r~f~~~L~~~iGp~~DvpApDvGt~~~em~~~~~~y~~~~~~~~gvvTGKp~~~GGs~~r~~aTg~Gv~~~ 238 (470)
T 2bma_A 159 SDNEILKFCQAFMNELYRHIGPCTDVPAGDIGVGGREIGYLYGQYKKIVNSFNGTLTGKNVKWGGSNLRVEATGYGLVYF 238 (470)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCSSCCHHHHHHHHHHHHHHHCCCSCSSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhccCCCCCccCCCCCCChHHHHHHHHHHHHhcCCcccEEeCCCccCCCCCCccccchHHHHHH
Confidence 445667777889999998889998889999986421 123455542 1 0111 12223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecCCccccCCccCCchh-------
Q 009982 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHF------- 389 (521)
Q Consensus 318 ll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~l~~~------- 389 (521)
+-.+++..|.+|++.||+|-|.|..|...|+.|.+. |. +++ +.|++|-|+... .++..
T Consensus 239 ~~~~l~~~G~~l~g~~vaVqG~GnVG~~~a~~L~~~-----Ga-------kvVavsD~~G~i~dp~--Gid~edl~~l~~ 304 (470)
T 2bma_A 239 VLEVLKSLNIPVEKQTAVVSGSGNVALYCVQKLLHL-----NV-------KVLTLSDSNGYVYEPN--GFTHENLEFLID 304 (470)
T ss_dssp HHHHHHTTTCCGGGCEEEEECSSHHHHHHHHHHHHT-----TC-------EECEEEETTEEEECSS--CCCHHHHHHHHH
T ss_pred HHHHHHhccCCcCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEEeCCceEECCC--CCCHHHHHHHHH
Confidence 788888899999999999999999999999999763 53 455 899999888754 24222
Q ss_pred -c-------hhhccccCCCC--CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 390 -K-------KPWAHEHEPVN--NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 390 -k-------~~fa~~~~~~~--~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
| ..|+...+... +-.+.. .++.||||=+.. ++.+|++-++.+-+ |.-.+|.--+| |+
T Consensus 305 ~k~~~~g~v~~~~~~~~~a~~v~~~~~~-~~~~DI~iPcA~-~~~I~~~na~~l~~-~~ak~V~EgAN~p~ 372 (470)
T 2bma_A 305 LKEEKKGRIKEYLNHSSTAKYFPNEKPW-GVPCTLAFPCAT-QNDVDLDQAKLLQK-NGCILVGEGANMPS 372 (470)
T ss_dssp HHTTTTCCGGGGGGTCSSCEECSSCCTT-SSCCSEEEECSS-TTCBCSHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHHhcCCcHHHHHhhcCCcEEecCcCee-ecCccEEEeccc-cCcCCHHHHHHHHh-cCcEEEEeCCCCCC
Confidence 1 12221000000 001222 568999998886 67999999999854 45679999999 65
No 27
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.06 E-value=0.011 Score=59.31 Aligned_cols=92 Identities=10% Similarity=0.220 Sum_probs=73.9
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (521)
+-.-+|-.|++..++..+ |+..++|++|+|. .|..+|.++... |. .+.+|+++
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~-----gA-------tVtv~~~~------------ 183 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNR-----NY-------TVSVCHSK------------ 183 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHC-----CC-------eEEEEeCC------------
Confidence 445678889999999998 9999999999984 899999998763 43 57788752
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
..+|.+.++. +|++|...+.++.+++|+++ +.-+|+=++
T Consensus 184 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 222 (276)
T 3ngx_A 184 ------------TKDIGSMTRS--SKIVVVAVGRPGFLNREMVT------PGSVVIDVG 222 (276)
T ss_dssp ------------CSCHHHHHHH--SSEEEECSSCTTCBCGGGCC------TTCEEEECC
T ss_pred ------------cccHHHhhcc--CCEEEECCCCCccccHhhcc------CCcEEEEec
Confidence 1468899998 99999999999999998873 445666664
No 28
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.03 E-value=0.011 Score=58.53 Aligned_cols=180 Identities=14% Similarity=0.175 Sum_probs=100.4
Q ss_pred hHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHH-hcCCCeeeeeecCCCccHH
Q 009982 212 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAF 290 (521)
Q Consensus 212 ~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~-~fGp~~lIq~EDf~~~~af 290 (521)
..|..+ |+| ..-+.+++..++ +.++++.++. .|.+ ++.--=-...++
T Consensus 23 ~~f~~~-gl~---~~Y~~~~v~~~~-------------------------l~~~~~~~~~~~~~G---~nVTiP~K~~v~ 70 (272)
T 3pwz_A 23 LFAQAS-NQQ---LEYGAIEGSLDD-------------------------FEAQVLQFRSEGGKG---MNITAPFKLRAF 70 (272)
T ss_dssp HHHHHT-TCC---EEEEEEECCTTT-------------------------HHHHHHHHHHTTCCE---EEECTTCHHHHH
T ss_pred HHHHHc-CCC---cEEEEEEcCHHH-------------------------HHHHHHHHhhCCCCE---EEECchhHHHHH
Confidence 345555 788 666677775321 5677777653 4533 444333334455
Q ss_pred HHHHHHcC--------CCceeccC-CCchHHHHHHHHHHH-HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 009982 291 ELLAKYGT--------THLVFNDD-IQGTASVVLAGVVAA-LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 360 (521)
Q Consensus 291 ~iL~ryr~--------~~~~FnDD-iQGTaaV~LAgll~A-lk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~ 360 (521)
+++++... +..++.|+ ..|.-.= -.|++.+ ++..|.++++.+++|+|||.+|.+++..|.+. |.
T Consensus 71 ~~~d~l~~~A~~iGAvNTv~~~~g~l~G~NTD-~~G~~~~lL~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~-----G~ 144 (272)
T 3pwz_A 71 ELADRRSERAQLARAANALKFEDGRIVAENFD-GIGLLRDIEENLGEPLRNRRVLLLGAGGAVRGALLPFLQA-----GP 144 (272)
T ss_dssp HHCSEECHHHHHHTCCSEEEEETTEEEEECCH-HHHHHHHHHTTSCCCCTTSEEEEECCSHHHHHHHHHHHHT-----CC
T ss_pred HHHhhCCHHHHHhCccceEEccCCeEEEecCC-HHHHHHHHHHHcCCCccCCEEEEECccHHHHHHHHHHHHc-----CC
Confidence 55554321 11133333 3553332 4588888 88788899999999999998888887777652 64
Q ss_pred ChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccCCC-----CCCCHHHHHHHHc
Q 009982 361 PVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMAS 435 (521)
Q Consensus 361 ~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~ 435 (521)
++|+++++. .++ .....+.+....-...++.+.-. -++|++|-++..+ -.+..+.+
T Consensus 145 ------~~v~i~~R~----~~~---a~~la~~~~~~~~~~~~~~~l~~-~~~DivInaTp~gm~~~~~~i~~~~l----- 205 (272)
T 3pwz_A 145 ------SELVIANRD----MAK---ALALRNELDHSRLRISRYEALEG-QSFDIVVNATSASLTADLPPLPADVL----- 205 (272)
T ss_dssp ------SEEEEECSC----HHH---HHHHHHHHCCTTEEEECSGGGTT-CCCSEEEECSSGGGGTCCCCCCGGGG-----
T ss_pred ------CEEEEEeCC----HHH---HHHHHHHhccCCeeEeeHHHhcc-cCCCEEEECCCCCCCCCCCCCCHHHh-----
Confidence 579988874 222 11111222110000012222111 4599999877543 12444332
Q ss_pred CCCCcEEEEc-CCCC
Q 009982 436 FNEKPLILAL-SNPT 449 (521)
Q Consensus 436 ~~erPIIFaL-SNPt 449 (521)
.+..+||=| .||.
T Consensus 206 -~~~~~V~DlvY~P~ 219 (272)
T 3pwz_A 206 -GEAALAYELAYGKG 219 (272)
T ss_dssp -TTCSEEEESSCSCC
T ss_pred -CcCCEEEEeecCCC
Confidence 356788877 5664
No 29
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.00 E-value=0.013 Score=58.23 Aligned_cols=88 Identities=15% Similarity=0.202 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (521)
-.|++.+++..+.++++.+++|+|||.+|.+++..|... |. ++|+++|+. .++ .....+.+.
T Consensus 111 ~~G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~-----G~------~~v~i~~R~----~~~---a~~la~~~~ 172 (283)
T 3jyo_A 111 VSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTH-----GV------QKLQVADLD----TSR---AQALADVIN 172 (283)
T ss_dssp HHHHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECSS----HHH---HHHHHHHHH
T ss_pred HHHHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEECC----HHH---HHHHHHHHH
Confidence 468889999888899999999999998888887777653 64 679988874 222 111112221
Q ss_pred cc-------cCCCCCHHHHhcccCCcEEEEccCCC
Q 009982 395 HE-------HEPVNNLLDAVKVIKPTILIGSSGVG 422 (521)
Q Consensus 395 ~~-------~~~~~~L~eav~~vkptvLIG~S~~~ 422 (521)
.. .-+..+|.++++. +|++|-++..+
T Consensus 173 ~~~~~~~i~~~~~~~l~~~l~~--~DiVInaTp~G 205 (283)
T 3jyo_A 173 NAVGREAVVGVDARGIEDVIAA--ADGVVNATPMG 205 (283)
T ss_dssp HHHTSCCEEEECSTTHHHHHHH--SSEEEECSSTT
T ss_pred hhcCCceEEEcCHHHHHHHHhc--CCEEEECCCCC
Confidence 11 1123478888887 99999887654
No 30
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=96.00 E-value=0.059 Score=56.94 Aligned_cols=177 Identities=19% Similarity=0.182 Sum_probs=118.4
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHcC-----CCceeccC----------CCchHHHHH
Q 009982 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYGT-----THLVFNDD----------IQGTASVVL 315 (521)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr~-----~~~~FnDD----------iQGTaaV~L 315 (521)
+.+|-..|...|+.++.+.-||..-|-=+|+... ... +.+.|+. ...++.-+ -.-||-=+.
T Consensus 116 s~~e~~r~~r~f~~~l~~~iG~~~dvpA~D~Gt~-~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~ 194 (421)
T 1v9l_A 116 SQRELEELSRGYARAIAPLIGDVVDIPAPDVGTN-AQIMAWMVDEYSKIKGYNVPGVFTSKPPELWGNPVREYATGFGVA 194 (421)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEEEECCTTCC-HHHHHHHHHHHHHHHTSCCGGGSCSCCSSSSCCGGGGGHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCCC-HHHHHHHHHHHHHHhCCCCCCeEeccchhhCCCCCcccchHHHHH
Confidence 4456678899999999999999999999999873 222 2355531 11223222 123555555
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecCCccccCCccC---Cchhch
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDS---LQHFKK 391 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~---l~~~k~ 391 (521)
-++-.+++..|.+|++.||+|.|.|..|...|++|.+. |. +++ +.|++|-|+....=+ +..++.
T Consensus 195 ~~~~~~~~~~g~~l~gk~vaVqG~GnVG~~aa~~L~e~-----Ga-------kVVavsD~~G~i~dp~GlD~~~l~~~k~ 262 (421)
T 1v9l_A 195 VATREMAKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKM-----GA-------KVIAVSDINGVAYRKEGLNVELIQKNKG 262 (421)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSSCEEECTTCCCTHHHHHTTT
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEECCCcEEECCCCCCHHHHHHHHH
Confidence 56777888899999999999999999999999888653 53 455 999999998764211 222222
Q ss_pred hhcc-------cc---CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 392 PWAH-------EH---EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 392 ~fa~-------~~---~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
.+-. .. ....+-.| +-.++.|+|+=+.. ++.+|++-++.+ .-.||.--+| |+
T Consensus 263 ~~g~~~v~~y~~~~~~~~~~~~~~-~~~~~~Dil~P~A~-~~~I~~~~a~~l----~ak~V~EgAN~p~ 325 (421)
T 1v9l_A 263 LTGPALVELFTTKDNAEFVKNPDA-IFKLDVDIFVPAAI-ENVIRGDNAGLV----KARLVVEGANGPT 325 (421)
T ss_dssp SCHHHHHHHHHHTSCCCCCSSTTG-GGGCCCSEEEECSC-SSCBCTTTTTTC----CCSEEECCSSSCB
T ss_pred hhCCccccccccccCceEeCCchh-hhcCCccEEEecCc-CCccchhhHHHc----CceEEEecCCCcC
Confidence 1110 00 11111123 34468999997775 678998888777 4679988888 65
No 31
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=95.97 E-value=0.011 Score=59.82 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=78.2
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (521)
+-.-+|-.|++-.++..+.+++..++||+|+|. .|.-+|.++... | ..+.+|+++
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~-----g-------AtVtv~hs~------------ 192 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLA-----G-------CTTTVTHRF------------ 192 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTT-----T-------CEEEEECSS------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHC-----C-------CeEEEEeCC------------
Confidence 455678888999999999999999999999995 699999888652 4 357888632
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|
T Consensus 193 ------------t~~L~~~~~~--ADIVI~Avg~p~lI~~~~vk------~GavVIDVgi~ 233 (288)
T 1b0a_A 193 ------------TKNLRHHVEN--ADLLIVAVGKPGFIPGDWIK------EGAIVIDVGIN 233 (288)
T ss_dssp ------------CSCHHHHHHH--CSEEEECSCCTTCBCTTTSC------TTCEEEECCCE
T ss_pred ------------chhHHHHhcc--CCEEEECCCCcCcCCHHHcC------CCcEEEEccCC
Confidence 1468999998 99999999999999999983 45677777754
No 32
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.95 E-value=0.18 Score=53.11 Aligned_cols=177 Identities=18% Similarity=0.178 Sum_probs=119.6
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCcc--HHHHHHHHc---CC--Cceec----------cCCCchHHHHHH
Q 009982 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHN--AFELLAKYG---TT--HLVFN----------DDIQGTASVVLA 316 (521)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~--af~iL~ryr---~~--~~~Fn----------DDiQGTaaV~LA 316 (521)
+.+|-..|...|+.++.+.-||..-|-=+|+...- ---+.+.|+ .. ..++- +.-.-||-=+.-
T Consensus 115 s~~e~~r~~r~f~~~l~~~ig~~~dvpa~D~gt~~~~m~~~~~~y~~~~~~~~~~~~tGk~~~~GGs~~r~~aTg~Gv~~ 194 (415)
T 2tmg_A 115 SRRELERLSRRFFREIQVIIGPYNDIPAPDVNTNADVIAWYMDEYEMNVGHTVLGIVTGKPVELGGSKGREEATGRGVKV 194 (415)
T ss_dssp CHHHHHHHHHHHHHHTGGGCBTTTEECCBCTTCCHHHHHHHHHHHHHHHSSCCCCSCSSCCGGGTCCTTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcEEeCCCCCCCHHHHHHHHHHHHHhhCCCCCCeEecCchhhCCCCCcCcchHHHHHH
Confidence 44566778899999999988998888899998752 112345552 11 12332 222346666666
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEE-EEecCCccccCCccCCchhc-hhhc
Q 009982 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIC-LVDSKGLIVSSRKDSLQHFK-KPWA 394 (521)
Q Consensus 317 gll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~-lvDs~GLi~~~R~~~l~~~k-~~fa 394 (521)
++-.+++..|.+|++.||+|.|.|..|...|++|.+. .|. +++ +.|++|-|+.... ++... +.+.
T Consensus 195 ~~~~~~~~~g~~l~g~~vaVqG~GnVG~~~a~~L~e~----~Ga-------kvVavsD~~G~i~dp~G--ld~~~l~~~~ 261 (415)
T 2tmg_A 195 CAGLAMDVLGIDPKKATVAVQGFGNVGQFAALLISQE----LGS-------KVVAVSDSRGGIYNPEG--FDVEELIRYK 261 (415)
T ss_dssp HHHHHHHHTTCCTTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEEECSSCEEECTTC--CCHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHHHh----cCC-------EEEEEEeCCCeEECCCC--CCHHHHHHHH
Confidence 7778888899999999999999999999999988651 253 455 8999999988643 33211 1121
Q ss_pred cccCCC--------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 395 HEHEPV--------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 395 ~~~~~~--------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
.....+ -+-.| +-.++.||||=+.. ++..|++-.+.+ .-.+|.--+| |+
T Consensus 262 ~~~g~l~~y~~a~~~~~~e-il~~~~DIliP~A~-~n~i~~~~a~~l----~ak~V~EgAN~p~ 319 (415)
T 2tmg_A 262 KEHGTVVTYPKGERITNEE-LLELDVDILVPAAL-EGAIHAGNAERI----KAKAVVEGANGPT 319 (415)
T ss_dssp HHSSCSTTCSSSEEECHHH-HTTCSCSEEEECSS-TTSBCHHHHTTC----CCSEEECCSSSCB
T ss_pred HhhCCcccCCCceEcCchh-hhcCCCcEEEecCC-cCccCcccHHHc----CCeEEEeCCCccc
Confidence 111110 12334 45578999998776 568999888877 4668888888 65
No 33
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.87 E-value=0.0094 Score=60.89 Aligned_cols=113 Identities=19% Similarity=0.258 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHH---------hCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCC
Q 009982 313 VVLAGVVAALKL---------IGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (521)
Q Consensus 313 V~LAgll~Alk~---------~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (521)
++-.|.+-.++- .|.++...++||+|+|. .|.-+|+++... | ..+.++|+...-...|
T Consensus 150 cTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~-----g-------AtVtv~nR~~~~l~~r 217 (320)
T 1edz_A 150 CTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLAND-----G-------ATVYSVDVNNIQKFTR 217 (320)
T ss_dssp HHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTT-----S-------CEEEEECSSEEEEEES
T ss_pred CcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHC-----C-------CEEEEEeCchHHHHhH
Confidence 333444666666 68899999999999995 598888888653 4 3589999976655555
Q ss_pred ccCCchhchhhccccCC---C--CCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 383 KDSLQHFKKPWAHEHEP---V--NNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 383 ~~~l~~~k~~fa~~~~~---~--~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.+.+... ++.... . .+|.++++. +|++|+..+.++. +|.|+|+ +.-+|+-++.|-
T Consensus 218 a~~la~~----~~~~t~~~~t~~~~L~e~l~~--ADIVIsAtg~p~~vI~~e~vk------~GavVIDVgi~r 278 (320)
T 1edz_A 218 GESLKLN----KHHVEDLGEYSEDLLKKCSLD--SDVVITGVPSENYKFPTEYIK------EGAVCINFACTK 278 (320)
T ss_dssp CCCSSCC----CCEEEEEEECCHHHHHHHHHH--CSEEEECCCCTTCCBCTTTSC------TTEEEEECSSSC
T ss_pred HHHHhhh----cccccccccccHhHHHHHhcc--CCEEEECCCCCcceeCHHHcC------CCeEEEEcCCCc
Confidence 4434311 121100 1 479999998 9999999999887 9999973 345777777764
No 34
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=95.84 E-value=0.017 Score=58.34 Aligned_cols=95 Identities=18% Similarity=0.271 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh
Q 009982 311 ASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF 389 (521)
Q Consensus 311 aaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~ 389 (521)
.-++-.|++..|+-.+.+|+..++|++|+|. .|..+|.+|... |. .+.+|+++
T Consensus 141 ~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~-----gA-------tVtv~hs~-------------- 194 (286)
T 4a5o_A 141 RPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLG-----GC-------TVTVTHRF-------------- 194 (286)
T ss_dssp CCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHT-----TC-------EEEEECTT--------------
T ss_pred CCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHC-----CC-------eEEEEeCC--------------
Confidence 4567788999999999999999999999875 899999998753 43 47777642
Q ss_pred chhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 009982 390 KKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS-NPT 449 (521)
Q Consensus 390 k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (521)
..+|.+.++. +|++|...+.++.++.|+|+ +.-+|+=++ ||.
T Consensus 195 ----------T~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvgi~~~ 237 (286)
T 4a5o_A 195 ----------TRDLADHVSR--ADLVVVAAGKPGLVKGEWIK------EGAIVIDVGINRQ 237 (286)
T ss_dssp ----------CSCHHHHHHT--CSEEEECCCCTTCBCGGGSC------TTCEEEECCSCSS
T ss_pred ----------CcCHHHHhcc--CCEEEECCCCCCCCCHHHcC------CCeEEEEeccccc
Confidence 1368899987 99999999999999999984 455777664 664
No 35
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.72 E-value=0.017 Score=58.59 Aligned_cols=96 Identities=24% Similarity=0.314 Sum_probs=76.0
Q ss_pred CCchHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccC
Q 009982 307 IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (521)
Q Consensus 307 iQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~ 385 (521)
..|-.-++-.|++..++-.+.+|+..++||+|+|. .|..+|.+|... |. .+.+|+++ .
T Consensus 141 ~~~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~-----gA-------tVtv~~~~-------T-- 199 (300)
T 4a26_A 141 EPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKE-----NA-------TVTIVHSG-------T-- 199 (300)
T ss_dssp CCSCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHT-----TC-------EEEEECTT-------S--
T ss_pred cCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHC-----CC-------eEEEEeCC-------C--
Confidence 34445678888999999999999999999999876 899999998763 43 48888762 1
Q ss_pred CchhchhhccccCCCCCHH--HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 386 LQHFKKPWAHEHEPVNNLL--DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 386 l~~~k~~fa~~~~~~~~L~--eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.+|. +.++. +|++|...+.++.++.|+++ +.-+|+=++
T Consensus 200 ---------------~~l~l~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDvg 239 (300)
T 4a26_A 200 ---------------STEDMIDYLRT--ADIVIAAMGQPGYVKGEWIK------EGAAVVDVG 239 (300)
T ss_dssp ---------------CHHHHHHHHHT--CSEEEECSCCTTCBCGGGSC------TTCEEEECC
T ss_pred ---------------CCchhhhhhcc--CCEEEECCCCCCCCcHHhcC------CCcEEEEEe
Confidence 1345 88887 99999999999999999973 455776654
No 36
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.69 E-value=0.011 Score=58.67 Aligned_cols=111 Identities=22% Similarity=0.268 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (521)
-.|++.+++..+.++++.+++|+|||.+|.+++..|.+ .|. ++++++++. .++.+.+.. .+.
T Consensus 101 ~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~------~~v~v~~R~----~~~a~~la~---~~~ 162 (277)
T 3don_A 101 GIGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYK-----IVR------PTLTVANRT----MSRFNNWSL---NIN 162 (277)
T ss_dssp HHHHHHHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHT-----TCC------SCCEEECSC----GGGGTTCCS---CCE
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHH-----CCC------CEEEEEeCC----HHHHHHHHH---hcc
Confidence 45677888888999999999999999888888887765 364 578888885 222222221 111
Q ss_pred cccCCCCCHHHHhcccCCcEEEEccCCCCCCCH--HHHHHHHcCCCCcEEEEcC-CCC
Q 009982 395 HEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTK--EVIEAMASFNEKPLILALS-NPT 449 (521)
Q Consensus 395 ~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~--evv~~Ma~~~erPIIFaLS-NPt 449 (521)
. ....++.++++. +|++|-++..+ .... +.+ ......+..+|+=|+ ||.
T Consensus 163 ~--~~~~~~~~~~~~--aDiVInaTp~G-m~~~~~~~l-~~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 163 K--INLSHAESHLDE--FDIIINTTPAG-MNGNTDSVI-SLNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp E--ECHHHHHHTGGG--CSEEEECCC--------CCSS-CCTTCCSSCEEEESCCSSS
T ss_pred c--ccHhhHHHHhcC--CCEEEECccCC-CCCCCcCCC-CHHHcCCCCEEEEecCCCC
Confidence 0 112356666766 99999776543 2211 011 112234567888875 764
No 37
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.34 E-value=0.0071 Score=52.81 Aligned_cols=109 Identities=17% Similarity=0.248 Sum_probs=63.7
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (521)
|..+|+.+++-.+-+.. +.+|+|+|+|..|..+++.+.. .|. + ++++|+. .++ ...
T Consensus 4 ~~~sv~~~a~~~~~~~~-----~~~v~iiG~G~iG~~~a~~l~~-----~g~------~-v~v~~r~----~~~---~~~ 59 (144)
T 3oj0_A 4 GKVSIPSIVYDIVRKNG-----GNKILLVGNGMLASEIAPYFSY-----PQY------K-VTVAGRN----IDH---VRA 59 (144)
T ss_dssp CCCSHHHHHHHHHHHHC-----CCEEEEECCSHHHHHHGGGCCT-----TTC------E-EEEEESC----HHH---HHH
T ss_pred CcccHHHHHHHHHHhcc-----CCEEEEECCCHHHHHHHHHHHh-----CCC------E-EEEEcCC----HHH---HHH
Confidence 33455555544333322 7899999999999988877654 242 4 8888873 111 212
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
..+.|.-......++.++++. +|++|-+++.+ ..++.+++ .+.-+|+-+++|.
T Consensus 60 ~a~~~~~~~~~~~~~~~~~~~--~Divi~at~~~~~~~~~~~l------~~g~~vid~~~p~ 113 (144)
T 3oj0_A 60 FAEKYEYEYVLINDIDSLIKN--NDVIITATSSKTPIVEERSL------MPGKLFIDLGNPP 113 (144)
T ss_dssp HHHHHTCEEEECSCHHHHHHT--CSEEEECSCCSSCSBCGGGC------CTTCEEEECCSSC
T ss_pred HHHHhCCceEeecCHHHHhcC--CCEEEEeCCCCCcEeeHHHc------CCCCEEEEccCCc
Confidence 122221111234678888886 89998776544 23444333 2456777777774
No 38
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.34 E-value=0.022 Score=57.67 Aligned_cols=91 Identities=23% Similarity=0.293 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (521)
-.|++.+|+-.|.++++.+++|+|||.+|.+||..|.. .|. ++|+++++.+ .+.+........+.
T Consensus 138 ~~Gf~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~-----~Ga------~~V~i~nR~~----~~~~~a~~la~~~~ 202 (315)
T 3tnl_A 138 GTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAAL-----DGV------KEISIFNRKD----DFYANAEKTVEKIN 202 (315)
T ss_dssp HHHHHHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECSS----TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCEEEEECCChHHHHHHHHHHH-----CCC------CEEEEEECCC----chHHHHHHHHHHhh
Confidence 46788888888999999999999999888888777765 364 6899998852 11111111111121
Q ss_pred cc------cCCC---CCHHHHhcccCCcEEEEccCCC
Q 009982 395 HE------HEPV---NNLLDAVKVIKPTILIGSSGVG 422 (521)
Q Consensus 395 ~~------~~~~---~~L~eav~~vkptvLIG~S~~~ 422 (521)
.. ..+. .+|.++++. +|++|-++..+
T Consensus 203 ~~~~~~~~~~~~~~~~~l~~~l~~--aDiIINaTp~G 237 (315)
T 3tnl_A 203 SKTDCKAQLFDIEDHEQLRKEIAE--SVIFTNATGVG 237 (315)
T ss_dssp HHSSCEEEEEETTCHHHHHHHHHT--CSEEEECSSTT
T ss_pred hhcCCceEEeccchHHHHHhhhcC--CCEEEECccCC
Confidence 10 0111 236667765 99999777644
No 39
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.33 E-value=0.069 Score=55.17 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=107.2
Q ss_pred hhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccH--HHHHHHHcC---CCcee---ccCCCchHHHHHHHHHHHHHHhCC
Q 009982 256 QEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNA--FELLAKYGT---THLVF---NDDIQGTASVVLAGVVAALKLIGG 327 (521)
Q Consensus 256 ~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~~~F---nDDiQGTaaV~LAgll~Alk~~g~ 327 (521)
.+-++++..|.+++.+..|+ -|-=+|+...-. --+.+.|+. +-..+ .|--.-||-=+.-++-.+++..|.
T Consensus 93 ~~~e~~~r~~~~~~~~l~g~--~ipa~D~gt~~~~m~~~~~~~~~~tGk~~~~GGs~~~~~aTg~Gv~~~~~~~~~~~G~ 170 (355)
T 1c1d_A 93 STWARILRIHAENIDKLSGN--YWTGPDVNTNSADMDTLNDTTEFVFGRSLERGGAGSSAFTTAVGVFEAMKATVAHRGL 170 (355)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--EEEEECTTCCHHHHHHHHHHCSCBCCCCGGGTSCCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHHhcCC--cccCCCCCCCHHHHHHHHHhcCeeeccchhhCCCCCchhHHHHHHHHHHHHHHHhcCC
Confidence 45567788888888887765 467889876321 224556652 11111 111123555566677788888898
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccC-CCCCHHH
Q 009982 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHE-PVNNLLD 405 (521)
Q Consensus 328 -~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~-~~~~L~e 405 (521)
+|++.+++|.|.|..|..+|+.+... |. ++++.|++ ..| ..|+.... ..-++.+
T Consensus 171 ~~L~GktV~I~G~GnVG~~~A~~l~~~-----Ga-------kVvvsD~~----~~~--------~~~a~~~ga~~v~~~e 226 (355)
T 1c1d_A 171 GSLDGLTVLVQGLGAVGGSLASLAAEA-----GA-------QLLVADTD----TER--------VAHAVALGHTAVALED 226 (355)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----HHH--------HHHHHHTTCEECCGGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHC-----CC-------EEEEEeCC----ccH--------HHHHHhcCCEEeChHH
Confidence 89999999999999999999987543 63 57788864 111 22222110 1124445
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CCCCCC
Q 009982 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PTSQSE 453 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt~~~E 453 (521)
.++ ++.|+|+=+. ..+.++++-++.| +-.+|.--+| |+..+|
T Consensus 227 ll~-~~~DIliP~A-~~~~I~~~~~~~l----k~~iVie~AN~p~t~~e 269 (355)
T 1c1d_A 227 VLS-TPCDVFAPCA-MGGVITTEVARTL----DCSVVAGAANNVIADEA 269 (355)
T ss_dssp GGG-CCCSEEEECS-CSCCBCHHHHHHC----CCSEECCSCTTCBCSHH
T ss_pred hhc-CccceecHhH-HHhhcCHHHHhhC----CCCEEEECCCCCCCCHH
Confidence 443 4689999654 4679999999999 3578888888 653334
No 40
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=95.32 E-value=0.062 Score=57.64 Aligned_cols=123 Identities=15% Similarity=0.207 Sum_probs=87.6
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccC
Q 009982 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (521)
Q Consensus 306 DiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~ 385 (521)
.+.|.......|+ .+.++..+.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +.
T Consensus 235 ~~~~~~~~l~~gw---~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~Viv~d~~~~----~~-- 293 (479)
T 1v8b_A 235 NVYGCRHSLPDGL---MRATDFLISGKIVVICGYGDVGKGCASSMKGL-----GA-------RVYITEIDPI----CA-- 293 (479)
T ss_dssp HHHHHHHHHHHHH---HHHHCCCCTTSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSCHH----HH--
T ss_pred chHhHHHHHhhhh---hhccccccCCCEEEEEeeCHHHHHHHHHHHhC-----cC-------EEEEEeCChh----hH--
Confidence 3444444555662 35678899999999999999999999998653 53 6888887521 00
Q ss_pred CchhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009982 386 LQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (521)
Q Consensus 386 l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (521)
+. .+...-...+|.|+++. .|++|.+....+.++++.++.|. +..||.=.|.-. .|+.-++..+
T Consensus 294 ~~-----a~~~g~~~~~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gailiNvgrg~--~EId~~aL~~ 357 (479)
T 1v8b_A 294 IQ-----AVMEGFNVVTLDEIVDK--GDFFITCTGNVDVIKLEHLLKMK---NNAVVGNIGHFD--DEIQVNELFN 357 (479)
T ss_dssp HH-----HHTTTCEECCHHHHTTT--CSEEEECCSSSSSBCHHHHTTCC---TTCEEEECSSTT--TSBCHHHHHT
T ss_pred HH-----HHHcCCEecCHHHHHhc--CCEEEECCChhhhcCHHHHhhcC---CCcEEEEeCCCC--ccccchhhhc
Confidence 00 00111112479999987 99999998778899999999886 577888888755 6777776665
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=95.28 E-value=0.1 Score=53.81 Aligned_cols=102 Identities=16% Similarity=0.307 Sum_probs=64.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
++.+.+++|+|+|..|..+++.+... |. ++|+++|+. ..| .....+.|--+.-...++.+.+
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~-----G~------~~V~v~~r~----~~r---a~~la~~~g~~~~~~~~l~~~l 225 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDR-----GV------RAVLVANRT----YER---AVELARDLGGEAVRFDELVDHL 225 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHH-----CC------SEEEEECSS----HHH---HHHHHHHHTCEECCGGGHHHHH
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHcCCceecHHhHHHHh
Confidence 57889999999999999999888653 64 579988873 111 1111111211111224678888
Q ss_pred cccCCcEEEEccCCC-CCCCHHHHHH--HH-cCCCCcEEEEcCCCC
Q 009982 408 KVIKPTILIGSSGVG-RTFTKEVIEA--MA-SFNEKPLILALSNPT 449 (521)
Q Consensus 408 ~~vkptvLIG~S~~~-g~Ft~evv~~--Ma-~~~erPIIFaLSNPt 449 (521)
+. .|++|-+++.+ ..++++.++. |. +...+-+++-++.|.
T Consensus 226 ~~--aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~P~ 269 (404)
T 1gpj_A 226 AR--SDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPR 269 (404)
T ss_dssp HT--CSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSC
T ss_pred cC--CCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccCCC
Confidence 65 99999887654 3568888887 43 223344666677664
No 42
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.27 E-value=0.025 Score=57.18 Aligned_cols=90 Identities=26% Similarity=0.329 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
.|++.+++-.|.++++.+++|+|||.+|.+|+..|.+ .|. ++|+++++. ..+.+......+.+..
T Consensus 133 ~Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~-----~G~------~~v~v~nRt----~~~~~~a~~la~~~~~ 197 (312)
T 3t4e_A 133 TGHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAI-----EGI------KEIKLFNRK----DDFFEKAVAFAKRVNE 197 (312)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEECS----STHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHH-----cCC------CEEEEEECC----CchHHHHHHHHHHhhh
Confidence 5778888888899999999999999888888877765 364 689999884 2211111111112211
Q ss_pred c------cCCCCCH---HHHhcccCCcEEEEccCCC
Q 009982 396 E------HEPVNNL---LDAVKVIKPTILIGSSGVG 422 (521)
Q Consensus 396 ~------~~~~~~L---~eav~~vkptvLIG~S~~~ 422 (521)
. ..+..++ .+.++. +|++|-++..+
T Consensus 198 ~~~~~v~~~~~~~l~~~~~~l~~--~DiIINaTp~G 231 (312)
T 3t4e_A 198 NTDCVVTVTDLADQHAFTEALAS--ADILTNGTKVG 231 (312)
T ss_dssp HSSCEEEEEETTCHHHHHHHHHH--CSEEEECSSTT
T ss_pred ccCcceEEechHhhhhhHhhccC--ceEEEECCcCC
Confidence 1 0112344 566776 89999877654
No 43
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.13 E-value=0.035 Score=55.87 Aligned_cols=99 Identities=14% Similarity=0.288 Sum_probs=76.5
Q ss_pred chHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc
Q 009982 309 GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ 387 (521)
Q Consensus 309 GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~ 387 (521)
+-.-+|-.|++-.++..+.+|+..++|++|+|. .|.-+|.++.. .|. ...+.+|+|+
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~-----~g~-----~atVtv~h~~------------ 193 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTR-----RSE-----NATVTLCHTG------------ 193 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTS-----TTT-----CCEEEEECTT------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhc-----CCC-----CCEEEEEECc------------
Confidence 445667778899999999999999999999996 58888887753 210 1357777532
Q ss_pred hhchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 388 HFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 388 ~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
..+|.+.++. +|++|+..+.++.+|+|+|+ +.-+|+=++-|-
T Consensus 194 ------------t~~L~~~~~~--ADIVI~Avg~p~~I~~~~vk------~GavVIDVgi~r 235 (281)
T 2c2x_A 194 ------------TRDLPALTRQ--ADIVVAAVGVAHLLTADMVR------PGAAVIDVGVSR 235 (281)
T ss_dssp ------------CSCHHHHHTT--CSEEEECSCCTTCBCGGGSC------TTCEEEECCEEE
T ss_pred ------------hhHHHHHHhh--CCEEEECCCCCcccCHHHcC------CCcEEEEccCCC
Confidence 1479999987 99999999999999999984 356787777653
No 44
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.11 E-value=0.0077 Score=59.94 Aligned_cols=124 Identities=18% Similarity=0.305 Sum_probs=71.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC-CCCHHHHhcccC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP-VNNLLDAVKVIK 411 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~-~~~L~eav~~vk 411 (521)
||.|+|||..|.++|..++.. |. ...++++|.+---.......+.+.. +|.....- ..+ .++++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----g~-----~~eV~L~D~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~-~~a~~~-- 67 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-----GS-----CSELVLVDRDEDRAQAEAEDIAHAA-PVSHGTRVWHGG-HSELAD-- 67 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHTTSC-CTTSCCEEEEEC-GGGGTT--
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCHHHHHHHHHhhhhhh-hhcCCeEEEECC-HHHhCC--
Confidence 899999999999999877542 54 2479999985210000000011111 12111000 023 366776
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCC
Q 009982 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGS 473 (521)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGS 473 (521)
+|++|=+.+.+.. .-+++++.|+++++.-+|+-.|||.. .....+.+.+.-.-+|.+|.
T Consensus 68 aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~---~~~~~~~~~~~~~rviG~gt 140 (304)
T 2v6b_A 68 AQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVD---LLTDLATQLAPGQPVIGSGT 140 (304)
T ss_dssp CSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHH---HHHHHHHHHSCSSCEEECTT
T ss_pred CCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchH---HHHHHHHHhCChhcEEeCCc
Confidence 8998865543321 22788888988888888888999963 33444555555556777764
No 45
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=95.08 E-value=0.48 Score=50.47 Aligned_cols=178 Identities=17% Similarity=0.189 Sum_probs=118.1
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHH--HHHHHHc---CC--Cceecc----------CCCchHHHHHHH
Q 009982 255 GQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAF--ELLAKYG---TT--HLVFND----------DIQGTASVVLAG 317 (521)
Q Consensus 255 g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af--~iL~ryr---~~--~~~FnD----------DiQGTaaV~LAg 317 (521)
..|-..|...||..+.+..||..-|-=+|++..-.. -+.+.|+ .. .-|+-. .-.-||-=+.-+
T Consensus 137 ~~e~~r~~r~f~~~L~~~ig~~~dvpA~DvGt~~~~m~~~~~~y~~~~~~~~~g~~tGk~~~~GGs~~r~~aTg~Gv~~~ 216 (449)
T 1bgv_A 137 DREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRKIVGGFYNGVLTGKARSFGGSLVRPEATGYGSVYY 216 (449)
T ss_dssp HHHHHHHHHHHHHHHGGGCBTTTEEEECBTTBCHHHHHHHHHHHHHHHTSCCGGGSSSCCGGGTCCTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhheeCCCCcCCCCCCCCCHHHHHHHHHHHHHhcCCCcCceEecCCcccCCCCCcccchhHHHHHH
Confidence 356677777899999888999999999999876211 1233443 21 122211 223466666667
Q ss_pred HHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCC-chh-------
Q 009982 318 VVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL-QHF------- 389 (521)
Q Consensus 318 ll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l-~~~------- 389 (521)
+-.+++..|.+|++.||+|-|.|..|...|++|.+. |. +=+-+.|++|-|+... .+ ++.
T Consensus 217 ~~~~~~~~G~~l~g~~v~VqG~GnVG~~~a~~L~~~-----Ga------kvVavsD~~G~i~dp~--Gi~d~edi~~l~~ 283 (449)
T 1bgv_A 217 VEAVMKHENDTLVGKTVALAGFGNVAWGAAKKLAEL-----GA------KAVTLSGPDGYIYDPE--GITTEEKINYMLE 283 (449)
T ss_dssp HHHHHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHH-----TC------EEEEEEETTEEEECTT--CSCSHHHHHHHHH
T ss_pred HHHHHHHccCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEeCCceEECCC--cCCCHHHHHHHHH
Confidence 778888899999999999999999999999988764 53 3344799999988754 24 221
Q ss_pred -c-------hhhccc--cCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 390 -K-------KPWAHE--HEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 390 -k-------~~fa~~--~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
+ ..|+.. .+.. +-.+.. .++.|+|+=+.. ++.+|++-.+.+.+ |.-.+|.--+| |+
T Consensus 284 ~k~~~~g~v~~y~~~~~a~~i-~~~e~~-~~~~Dil~P~A~-~~~I~~~na~~l~a-~g~kiV~EgAN~p~ 350 (449)
T 1bgv_A 284 MRASGRNKVQDYADKFGVQFF-PGEKPW-GQKVDIIMPCAT-QNDVDLEQAKKIVA-NNVKYYIEVANMPT 350 (449)
T ss_dssp HHHHCCCCTHHHHHHHTCEEE-ETCCGG-GSCCSEEECCSC-TTCBCHHHHHHHHH-TTCCEEECCSSSCB
T ss_pred HHhccCCChhhcccccCCEEe-Cchhhh-cCCcceeecccc-ccccchhhHHHHHh-cCCeEEEeCCCCcC
Confidence 1 111110 0000 001122 468999998775 67999999999964 23579998888 65
No 46
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.92 E-value=0.081 Score=52.06 Aligned_cols=111 Identities=21% Similarity=0.195 Sum_probs=73.9
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCC
Q 009982 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (521)
Q Consensus 322 lk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~ 401 (521)
++..+..|.+.+++|+|+|..|..+|+.+... |. +++++|+.- .+ +...+..-++ .....
T Consensus 148 ~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~-----G~-------~V~~~d~~~----~~---~~~~~~~g~~-~~~~~ 207 (300)
T 2rir_A 148 IQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL-----GA-------NVKVGARSS----AH---LARITEMGLV-PFHTD 207 (300)
T ss_dssp HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSH----HH---HHHHHHTTCE-EEEGG
T ss_pred HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHCCCe-EEchh
Confidence 44567899999999999999999999988642 53 688888742 11 1111000001 00124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHh
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 460 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~ 460 (521)
+|.+.++. .|++|-... .+.++++.++.|. +..+|+=+|.-. .+|..+.+.
T Consensus 208 ~l~~~l~~--aDvVi~~~p-~~~i~~~~~~~mk---~g~~lin~a~g~--~~~~~~~a~ 258 (300)
T 2rir_A 208 ELKEHVKD--IDICINTIP-SMILNQTVLSSMT---PKTLILDLASRP--GGTDFKYAE 258 (300)
T ss_dssp GHHHHSTT--CSEEEECCS-SCCBCHHHHTTSC---TTCEEEECSSTT--CSBCHHHHH
T ss_pred hHHHHhhC--CCEEEECCC-hhhhCHHHHHhCC---CCCEEEEEeCCC--CCcCHHHHH
Confidence 68888876 999997766 4799999888775 567888888632 345454443
No 47
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=94.86 E-value=0.026 Score=56.07 Aligned_cols=87 Identities=22% Similarity=0.247 Sum_probs=57.6
Q ss_pred HHHHHHHHHhC-CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc
Q 009982 316 AGVVAALKLIG-GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA 394 (521)
Q Consensus 316 Agll~Alk~~g-~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa 394 (521)
.|++.+++..+ .+++..+++|+|||.+|.++|..|.+. |. ++++++|+. .++ .....+.+.
T Consensus 125 ~G~~~~l~~~~~~~l~~~~vlVlGaGg~g~aia~~L~~~-----G~------~~V~v~nR~----~~k---a~~la~~~~ 186 (297)
T 2egg_A 125 LGYVQALEEEMNITLDGKRILVIGAGGGARGIYFSLLST-----AA------ERIDMANRT----VEK---AERLVREGD 186 (297)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECSS----HHH---HHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCCCCEEEEECcHHHHHHHHHHHHHC-----CC------CEEEEEeCC----HHH---HHHHHHHhh
Confidence 78888888877 789999999999999988888887652 53 579988874 122 111111111
Q ss_pred c---ccCCCCCHHHHhcccCCcEEEEccCCC
Q 009982 395 H---EHEPVNNLLDAVKVIKPTILIGSSGVG 422 (521)
Q Consensus 395 ~---~~~~~~~L~eav~~vkptvLIG~S~~~ 422 (521)
. ......++.++++. +|++|-+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~--aDivIn~t~~~ 215 (297)
T 2egg_A 187 ERRSAYFSLAEAETRLAE--YDIIINTTSVG 215 (297)
T ss_dssp SSSCCEECHHHHHHTGGG--CSEEEECSCTT
T ss_pred hccCceeeHHHHHhhhcc--CCEEEECCCCC
Confidence 1 00011246666765 99999888755
No 48
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=94.80 E-value=0.044 Score=53.60 Aligned_cols=145 Identities=19% Similarity=0.291 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhcCC--------CeeeeeecCCCccHHHHHH--HHcCCCceeccCCCchHHHHHHHHHHHHHHhCCCccc
Q 009982 262 LDEFMSAVKQNYGE--------KVLIQFEDFANHNAFELLA--KYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLAE 331 (521)
Q Consensus 262 idefv~av~~~fGp--------~~lIq~EDf~~~~af~iL~--ryr~~~~~FnDDiQGTaaV~LAgll~Alk~~g~~L~d 331 (521)
+++|++.++..|.+ ..++.+=|- ++.|..+=. -...+ .=+|-|- .|++.+|+.. .+++
T Consensus 42 l~~~~~~~~~~~~G~nVT~P~K~~v~~~~d~-~~~A~~iGAvNTi~~~-~G~NTD~--------~G~~~~l~~~--~~~~ 109 (253)
T 3u62_A 42 FDTEIRRILEEYDGFNATIPHKERVMRYVEP-SEDAQRIKAVNCVFRG-KGYNTDW--------VGVVKSLEGV--EVKE 109 (253)
T ss_dssp HHHHHHHHHHHCSEEEECTTCTTGGGGGSEE-CHHHHHHTCCCEEETT-EEECCHH--------HHHHHHTTTC--CCCS
T ss_pred HHHHHHHHhhCCCceeecCChHHHHHHHhCC-CHHHHHcCcceEeecC-EEEcchH--------HHHHHHHHhc--CCCC
Confidence 56677776644421 234555566 666654410 00001 3344442 3677777654 5788
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
+++|+|||.+|.+++..|... |. ++|+++|+. .+|.+.+.. .|.. ....++.++++.
T Consensus 110 -~vliiGaGg~a~ai~~~L~~~-----G~------~~I~v~nR~----~~ka~~la~---~~~~--~~~~~~~~~~~~-- 166 (253)
T 3u62_A 110 -PVVVVGAGGAARAVIYALLQM-----GV------KDIWVVNRT----IERAKALDF---PVKI--FSLDQLDEVVKK-- 166 (253)
T ss_dssp -SEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESC----HHHHHTCCS---SCEE--EEGGGHHHHHHT--
T ss_pred -eEEEECcHHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHHHHHHH---Hccc--CCHHHHHhhhcC--
Confidence 999999999999998888653 64 679999984 222222221 1211 123467888876
Q ss_pred CcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 412 PTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 412 ptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+|++|-++..+ ..+..+.+ .+..+|+-++-
T Consensus 167 aDiVInatp~gm~p~~~~i~~~~l------~~~~~V~Divy 201 (253)
T 3u62_A 167 AKSLFNTTSVGMKGEELPVSDDSL------KNLSLVYDVIY 201 (253)
T ss_dssp CSEEEECSSTTTTSCCCSCCHHHH------TTCSEEEECSS
T ss_pred CCEEEECCCCCCCCCCCCCCHHHh------CcCCEEEEeeC
Confidence 99999766432 13444443 25678887654
No 49
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.38 E-value=0.072 Score=57.32 Aligned_cols=100 Identities=16% Similarity=0.189 Sum_probs=74.2
Q ss_pred HHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCC
Q 009982 322 LKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVN 401 (521)
Q Consensus 322 lk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~ 401 (521)
.+.+|..|.+.+++|+|.|..|.++|+.+... |+ +++.+|++.. +. +... ...-...
T Consensus 268 ~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~-----G~-------~V~v~d~~~~----~~--~~a~-----~~G~~~~ 324 (494)
T 3d64_A 268 KRATDVMIAGKIAVVAGYGDVGKGCAQSLRGL-----GA-------TVWVTEIDPI----CA--LQAA-----MEGYRVV 324 (494)
T ss_dssp HHHHCCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSCHH----HH--HHHH-----TTTCEEC
T ss_pred hhccccccCCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCChH----hH--HHHH-----HcCCEeC
Confidence 36789999999999999999999999988542 53 6888887521 00 0000 0011124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
+|.|+++. .|++|......++++++.++.|. +..||.=.|...
T Consensus 325 ~l~ell~~--aDiVi~~~~t~~lI~~~~l~~MK---~gAilINvgrg~ 367 (494)
T 3d64_A 325 TMEYAADK--ADIFVTATGNYHVINHDHMKAMR---HNAIVCNIGHFD 367 (494)
T ss_dssp CHHHHTTT--CSEEEECSSSSCSBCHHHHHHCC---TTEEEEECSSSS
T ss_pred CHHHHHhc--CCEEEECCCcccccCHHHHhhCC---CCcEEEEcCCCc
Confidence 79999987 99999997777899999999996 577888888754
No 50
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.22 E-value=0.059 Score=53.24 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=63.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch---hchhhcc-ccCC-CCCHHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH---FKKPWAH-EHEP-VNNLLDA 406 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~---~k~~fa~-~~~~-~~~L~ea 406 (521)
.||.|+|||+.|.++|..|+.. |+ ...++++|++- ++.+.+.. +...+.. ...- ..++ ++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~-----g~-----~~~V~l~d~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~ 66 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ-----GV-----ADDYVFIDANE----AKVKADQIDFQDAMANLEAHGNIVINDW-AA 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSSSCCEEEESCG-GG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEcCCH----HHHHHHHHHHHhhhhhcCCCeEEEeCCH-HH
Confidence 3899999999999999988764 54 25799999852 11111110 0001110 0000 1456 67
Q ss_pred hcccCCcEEEEccCCC-------CCC-----------CHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 407 VKVIKPTILIGSSGVG-------RTF-----------TKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 407 v~~vkptvLIG~S~~~-------g~F-----------t~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
++. +|++|=+...+ |.. -+++++.|.+++.+.+|+-+|||..
T Consensus 67 ~~~--aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 67 LAD--ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVD 126 (309)
T ss_dssp GTT--CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHH
T ss_pred hCC--CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHH
Confidence 776 89888554432 211 2688889988888888888999973
No 51
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.22 E-value=0.096 Score=54.10 Aligned_cols=159 Identities=15% Similarity=0.126 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCC-ceeccC------C---CchHHHHHHHHHHHHHHh-CC
Q 009982 259 AELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTH-LVFNDD------I---QGTASVVLAGVVAALKLI-GG 327 (521)
Q Consensus 259 ~~~idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~-~~FnDD------i---QGTaaV~LAgll~Alk~~-g~ 327 (521)
++++..|.+++.+..|+ -|-=+|++..-. .+...-+++ ++---- + .-||-=+.-++..+++.. |.
T Consensus 93 ~~~~r~~~~~~~~l~g~--~i~A~D~Gt~~~--~m~~l~~~~~~~tGK~~~~ggs~~~~~aTg~GV~~~~~~~~~~~~G~ 168 (364)
T 1leh_A 93 EDMFRALGRFIQGLNGR--YITAEDVGTTVD--DMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGS 168 (364)
T ss_dssp HHHHHHHHHHHHTTTTS--EEBCBCTTCCHH--HHHHHHTTCSCBCSCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhcCc--eEEcccCCCCHH--HHHHHHHhcchhcccccccCCCCCcccchhhHHHHHHHHHHHhhccc
Confidence 45677778888887765 467778875332 333333333 111111 0 234444444555666664 76
Q ss_pred -CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 009982 328 -TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 328 -~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
+|++.+|+|.|+|..|..+|+.+.+. |. ++++.|++ . +.+..+.+.|- ...-++.+.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~-----Ga-------kVvv~D~~----~---~~l~~~a~~~g---a~~v~~~~l 226 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTE-----GA-------KLVVTDVN----K---AAVSAAVAEEG---ADAVAPNAI 226 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC----H---HHHHHHHHHHC---CEECCGGGT
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHC-----CC-------EEEEEcCC----H---HHHHHHHHHcC---CEEEChHHH
Confidence 89999999999999999999998653 63 47788852 1 11332222221 111133343
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
.. .+.|++|=++ ..+.++++.++.| .-.+|.--+| |+
T Consensus 227 l~-~~~DIvip~a-~~~~I~~~~~~~l----g~~iV~e~An~p~ 264 (364)
T 1leh_A 227 YG-VTCDIFAPCA-LGAVLNDFTIPQL----KAKVIAGSADNQL 264 (364)
T ss_dssp TT-CCCSEEEECS-CSCCBSTTHHHHC----CCSEECCSCSCCB
T ss_pred hc-cCCcEeeccc-hHHHhCHHHHHhC----CCcEEEeCCCCCc
Confidence 32 5789999665 4669999988888 3567776777 54
No 52
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=94.17 E-value=0.34 Score=50.36 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=83.4
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 299 THLVFNDDIQ---GTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.|++.|.--- .+|=-+++.+++..|-.|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.
T Consensus 81 gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~ 148 (380)
T 2o4c_A 81 GIAWSSAPGCNARGVVDYVLGCLLAMAEVRGADLAERTYGVVGAGQVGGRLVEVLRGL-----GW-------KVLVCDPP 148 (380)
T ss_dssp TCEEECCTTTTHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECHH
T ss_pred CCEEEeCCCcChHHHHHHHHHHHHHHHhhhhcccCCCEEEEEeCCHHHHHHHHHHHHC-----CC-------EEEEEcCC
Confidence 4556664322 344458999999999999999999999999999999999988643 64 58888864
Q ss_pred CccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc---C-----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 376 GLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS---G-----VGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 376 GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S---~-----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.- . . . ......+|.|+++. .|+++=.- . ..++|+++.++.|. +..++.=.|.
T Consensus 149 ~~------~-~-----~---~g~~~~~l~ell~~--aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~sR 208 (380)
T 2o4c_A 149 RQ------A-R-----E---PDGEFVSLERLLAE--ADVISLHTPLNRDGEHPTRHLLDEPRLAALR---PGTWLVNASR 208 (380)
T ss_dssp HH------H-H-----S---TTSCCCCHHHHHHH--CSEEEECCCCCSSSSSCCTTSBCHHHHHTSC---TTEEEEECSC
T ss_pred hh------h-h-----c---cCcccCCHHHHHHh--CCEEEEeccCccccccchhhhcCHHHHhhCC---CCcEEEECCC
Confidence 21 0 0 0 01123579999987 89887542 1 34688899998885 5678777775
No 53
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.03 E-value=0.085 Score=52.85 Aligned_cols=101 Identities=23% Similarity=0.299 Sum_probs=66.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC---CCCHHHHhc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP---VNNLLDAVK 408 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~---~~~L~eav~ 408 (521)
||+|+|| |..|..++..|+. .|+ ...++++|.+-. .+...+|.+...+ . +... ..++.++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~-----~~~-----~~ev~L~Di~~~--~~~a~dL~~~~~~-~-~l~~~~~t~d~~~a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN-----SPL-----VSRLTLYDIAHT--PGVAADLSHIETR-A-TVKGYLGPEQLPDCLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT-----CTT-----CSEEEEEESSSH--HHHHHHHTTSSSS-C-EEEEEESGGGHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CcEEEEEeCCcc--HHHHHHHhccCcC-c-eEEEecCCCCHHHHhC
Confidence 7999998 9999998877653 354 357999998651 1100012221100 0 0011 136888999
Q ss_pred ccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 409 VIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 409 ~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
+ +|++|=+.+.+ | ...+++++.|.+++...+|+-.|||.
T Consensus 68 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv 120 (314)
T 1mld_A 68 G--CDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPV 120 (314)
T ss_dssp T--CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred C--CCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCc
Confidence 8 99988555444 2 24677888888899998988899997
No 54
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=94.01 E-value=0.26 Score=53.30 Aligned_cols=179 Identities=18% Similarity=0.241 Sum_probs=117.5
Q ss_pred CChhhhHHHHHHHHHHHHH--hcCCCeeeeeecCCCccH--HHHHHHHcC---CC------ceeccC---------CCch
Q 009982 253 ATGQEYAELLDEFMSAVKQ--NYGEKVLIQFEDFANHNA--FELLAKYGT---TH------LVFNDD---------IQGT 310 (521)
Q Consensus 253 ~~g~~y~~~idefv~av~~--~fGp~~lIq~EDf~~~~a--f~iL~ryr~---~~------~~FnDD---------iQGT 310 (521)
.+..|-..|.-.||..+.+ ..||..-|-=+|++..-. --+.+.|+. .. ++--.- -.-|
T Consensus 136 ~s~~El~r~~r~f~~eL~~~~~IGp~~dipApDvGt~~~eM~wm~d~y~~~~g~~~~~~~g~vTGKp~~~GGs~~r~eAT 215 (501)
T 3mw9_A 136 YTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISAT 215 (501)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTSCBTTTEECCBCTTCCHHHHHHHHHHHHHTTTTTCTTGGGSCSSCCGGGTCCTTTTTHH
T ss_pred CCHHHHHHHHHHHHHHHhhccCCCCCeeEecCCCCCCHHHHHHHHHHHHHHhCCCcccCCceeeCCcccccCCCCCCCch
Confidence 4567778889999999985 788988899999987532 225677752 11 111111 1234
Q ss_pred HHHHHHHHHH------HHHHhCC--CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCC
Q 009982 311 ASVVLAGVVA------ALKLIGG--TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR 382 (521)
Q Consensus 311 aaV~LAgll~------Alk~~g~--~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R 382 (521)
|-=+.-++-+ +++..|. .|++.||+|-|.|..|...|+.|.+. |. +-+-+.|++|-|+...
T Consensus 216 g~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~-----Ga------kVVavsDs~G~iyd~~ 284 (501)
T 3mw9_A 216 GRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRF-----GA------KCITVGESDGSIWNPD 284 (501)
T ss_dssp HHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEEECCSHHHHHHHHHHHHT-----TC------EEEEEECSSCEEECTT
T ss_pred HHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEEECCCHHHHHHHHHHHHC-----CC------EEEEEEcCCceEECCC
Confidence 4444444443 3456675 58999999999999999999999763 53 4456899999999764
Q ss_pred ccCCchhch-hhccccCCC------CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC-CC
Q 009982 383 KDSLQHFKK-PWAHEHEPV------NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN-PT 449 (521)
Q Consensus 383 ~~~l~~~k~-~fa~~~~~~------~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN-Pt 449 (521)
.++..+. .+......+ ..+.+.+-.++.||||=+..+ +.+|++-++.+ .-.||.--+| |+
T Consensus 285 --Gid~~~l~~~k~~~g~i~~~~~a~~~~~~il~~~~DIliPcA~~-n~I~~~na~~l----~akiV~EgAN~p~ 352 (501)
T 3mw9_A 285 --GIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASE-KQLTKSNAPRV----KAKIIAEGANGPT 352 (501)
T ss_dssp --CCCHHHHHHHHHHHSSSTTCTTSEEECSCGGGSCCSEEEECSSS-CCBCTTTGGGC----CCSEEECCSSSCB
T ss_pred --CCCHHHHHHHHHhcCCeecccCceeeccccccccceEEeecccc-CccCHhHHHHc----CceEEEeCCCCcC
Confidence 3433221 111111100 001112445789999988875 79999998887 4789999999 53
No 55
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.88 E-value=0.12 Score=50.69 Aligned_cols=121 Identities=17% Similarity=0.243 Sum_probs=73.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
..||.|+|+|..|.++|..+... |.+ ..+++++|++ .+ .+...++.| ......++.|+++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~-----g~~----~~~V~v~dr~----~~---~~~~l~~~~--gi~~~~~~~~~~~~- 63 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN-----GYD----PNRICVTNRS----LD---KLDFFKEKC--GVHTTQDNRQGALN- 63 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT-----TCC----GGGEEEECSS----SH---HHHHHHHTT--CCEEESCHHHHHSS-
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-----CCC----CCeEEEEeCC----HH---HHHHHHHHc--CCEEeCChHHHHhc-
Confidence 46899999999999999988763 542 2478888874 11 122222222 11112578888886
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEEecCCCCCccee
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNPTSQSECTAEEAYTWSKG--RAIFASGSPFDPFEY 480 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNPt~~~Ectpe~A~~wt~G--~aifAsGSPf~pv~~ 480 (521)
+|++| ++..+ -..+++++.+..+ .++.+|...++..+ .+..-+|... +++-+ -|+.|..+
T Consensus 64 -aDvVi-lav~p-~~~~~vl~~l~~~~l~~~~iiiS~~agi~-----~~~l~~~l~~~~~vvr~--mPn~p~~v 127 (280)
T 3tri_A 64 -ADVVV-LAVKP-HQIKMVCEELKDILSETKILVISLAVGVT-----TPLIEKWLGKASRIVRA--MPNTPSSV 127 (280)
T ss_dssp -CSEEE-ECSCG-GGHHHHHHHHHHHHHTTTCEEEECCTTCC-----HHHHHHHHTCCSSEEEE--ECCGGGGG
T ss_pred -CCeEE-EEeCH-HHHHHHHHHHHhhccCCCeEEEEecCCCC-----HHHHHHHcCCCCeEEEE--ecCChHHh
Confidence 88877 44444 4567888888754 45668888887764 3444444332 33322 46666654
No 56
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.87 E-value=0.088 Score=53.14 Aligned_cols=124 Identities=17% Similarity=0.236 Sum_probs=77.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC---CCHHHHhc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLDAVK 408 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~---~~L~eav~ 408 (521)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=..+.-...+.+.. .+......+ .++.++++
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-----g~------~~V~L~D~~~~~~~~~~~~l~~~~-~~~~~~~~i~~t~d~~ea~~ 77 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-----EL------ADVVLYDVVKGMPEGKALDLSHVT-SVVDTNVSVRAEYSYEAALT 77 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSSSHHHHHHHHHHHHH-HHTTCCCCEEEECSHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECChhHHHHHHHHHHhhh-hccCCCCEEEEeCCHHHHhC
Confidence 5899999999999999998763 54 139999986210100000011111 111111112 57888998
Q ss_pred ccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcE
Q 009982 409 VIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRA 467 (521)
Q Consensus 409 ~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~a 467 (521)
+ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+=-|||..- +.+-+++.+ .-.-
T Consensus 78 ~--aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~---~t~~~~~~~~~~~~r 152 (331)
T 1pzg_A 78 G--ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDC---MVKVMCEASGVPTNM 152 (331)
T ss_dssp T--CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGG
T ss_pred C--CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHH---HHHHHHHhcCCChhc
Confidence 7 99998665433 32 246888999999988898888999743 234444444 2345
Q ss_pred EEecC
Q 009982 468 IFASG 472 (521)
Q Consensus 468 ifAsG 472 (521)
+|++|
T Consensus 153 viG~g 157 (331)
T 1pzg_A 153 ICGMA 157 (331)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 77876
No 57
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.83 E-value=0.15 Score=49.72 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=67.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
.|++.+++..|..+++.+++|+|+|.+|.++|..+.+. |. +++++|+. .++ .....+.+.
T Consensus 114 ~G~~~~l~~~~~~~~~~~v~iiGaG~~g~aia~~L~~~-----g~-------~V~v~~r~----~~~---~~~l~~~~g- 173 (275)
T 2hk9_A 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKE-----GA-------KVFLWNRT----KEK---AIKLAQKFP- 173 (275)
T ss_dssp HHHHHHHHHHCTTGGGSEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSS----HHH---HHHHTTTSC-
T ss_pred HHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHc-----CC-------EEEEEECC----HHH---HHHHHHHcC-
Confidence 48888888888899999999999999999999888664 42 68888874 111 111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (521)
.....++.++++. +|++|-+...+ ... .+.+. .....+..+|+-++.
T Consensus 174 -~~~~~~~~~~~~~--aDiVi~atp~~-~~~~~~~~i~-~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 174 -LEVVNSPEEVIDK--VQVIVNTTSVG-LKDEDPEIFN-YDLIKKDHVVVDIIY 222 (275)
T ss_dssp -EEECSCGGGTGGG--CSEEEECSSTT-SSTTCCCSSC-GGGCCTTSEEEESSS
T ss_pred -CeeehhHHhhhcC--CCEEEEeCCCC-CCCCCCCCCC-HHHcCCCCEEEEcCC
Confidence 0112367788876 99999776644 221 11221 112235567777776
No 58
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.73 E-value=0.096 Score=55.82 Aligned_cols=23 Identities=26% Similarity=0.463 Sum_probs=21.9
Q ss_pred HHHHHHHHcCCCCcEEEEcCCCC
Q 009982 427 KEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 427 ~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.|+++.|.++|+.-+++=.|||.
T Consensus 140 ~~i~~~i~~~~P~A~~in~tNP~ 162 (477)
T 3u95_A 140 LEIAEKMKKMAPKAYLMQTANPV 162 (477)
T ss_dssp HHHHHHHHHHCTTCEEEECSSCH
T ss_pred HHHHHHHHhhCCCeEEEEecChH
Confidence 68999999999999999999997
No 59
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.54 E-value=0.11 Score=52.69 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=64.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHH
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLL 404 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~ 404 (521)
++..+++|+|||.+|.+++..+... | | +++++|+. ..| +...+..++... ....++.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~-----G-----a--~V~v~dr~----~~r---~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL-----G-----A--QVQIFDIN----VER---LSYLETLFGSRVELLYSNSAEIE 225 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-----T-----C--EEEEEESC----HHH---HHHHHHHHGGGSEEEECCHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC----HHH---HHHHHHhhCceeEeeeCCHHHHH
Confidence 6678999999999999999887653 5 2 68888874 122 222222232210 1113567
Q ss_pred HHhcccCCcEEEEccCCCCC-----CCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 405 DAVKVIKPTILIGSSGVGRT-----FTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~-----Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
+.++. .|++|.+++.++. ++++.++.|. +.-+|+-++.+
T Consensus 226 ~~~~~--~DvVI~~~~~~~~~~~~li~~~~~~~~~---~g~~ivdv~~~ 269 (361)
T 1pjc_A 226 TAVAE--ADLLIGAVLVPGRRAPILVPASLVEQMR---TGSVIVDVAVD 269 (361)
T ss_dssp HHHHT--CSEEEECCCCTTSSCCCCBCHHHHTTSC---TTCEEEETTCT
T ss_pred HHHcC--CCEEEECCCcCCCCCCeecCHHHHhhCC---CCCEEEEEecC
Confidence 77775 9999998876542 5888888885 45677777754
No 60
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.50 E-value=0.1 Score=51.72 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=74.5
Q ss_pred hHHhhhcCCCCCceeeEEEecCCCccccccCcccccccccCCChhhhHHHHHHHHHHHHH-hcCCCeeeeeecCCCccHH
Q 009982 212 ALYTALGGIRPSACLPITVDVGTNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQ-NYGEKVLIQFEDFANHNAF 290 (521)
Q Consensus 212 ~Ly~a~gGI~P~~~lPI~LDvGTnne~LL~Dp~YlG~r~~R~~g~~y~~~idefv~av~~-~fGp~~lIq~EDf~~~~af 290 (521)
..|..+ |+| ..-+.+++..++ +.++++.++. .|.+ ++.--=-...++
T Consensus 29 ~~f~~~-gl~---~~Y~~~~v~~~~-------------------------l~~~~~~~~~~~~~G---~nVTiP~K~~v~ 76 (281)
T 3o8q_A 29 LFARQT-QQS---MIYTAQCVPVDG-------------------------FTEAAKHFFAQGGRG---CNVTVPFKEEAY 76 (281)
T ss_dssp HHHHHT-TCC---EEEEEECCCTTC-------------------------HHHHHHHHHHTTCCE---EEECTTSHHHHH
T ss_pred HHHHHc-CCC---cEEEEeecCHHH-------------------------HHHHHHHHHhCCCCE---EEECCccHHHHH
Confidence 566665 788 666667765321 5667776653 4433 433222223455
Q ss_pred HHHHHHcC--------CCceeccC--CCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCC
Q 009982 291 ELLAKYGT--------THLVFNDD--IQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKA 360 (521)
Q Consensus 291 ~iL~ryr~--------~~~~FnDD--iQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~ 360 (521)
+++++... +..++++| ..|.-.= -.|++.+|+..|.++++.+++|+|||.+|.+++..|.+ .|.
T Consensus 77 ~~ld~l~~~A~~iGAVNTv~~~~~g~l~G~NTD-~~G~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~-----~G~ 150 (281)
T 3o8q_A 77 RFADRLTERARLAGAVNTLKKLDDGEILGDNTD-GEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLD-----QQP 150 (281)
T ss_dssp HHCSEECHHHHHHTCCSEEEECTTSCEEEECCH-HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHT-----TCC
T ss_pred HHHhhcCHHHHhhCeeeEEEEcCCCcEEEEecH-HHHHHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHh-----cCC
Confidence 55544321 22344554 2342221 46788888888999999999999999888888877755 264
Q ss_pred ChhhhcCcEEEEecC
Q 009982 361 PVEETRKKICLVDSK 375 (521)
Q Consensus 361 ~~eeA~~~i~lvDs~ 375 (521)
++|+++++.
T Consensus 151 ------~~v~v~~R~ 159 (281)
T 3o8q_A 151 ------ASITVTNRT 159 (281)
T ss_dssp ------SEEEEEESS
T ss_pred ------CeEEEEECC
Confidence 579999884
No 61
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.48 E-value=0.099 Score=52.16 Aligned_cols=104 Identities=19% Similarity=0.299 Sum_probs=66.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
.|++.+|+..|.++++.+++|+|||.+|.+++..|.+. |. ++|+++++. .+|.+.|. ..+..
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~-----G~------~~v~v~nRt----~~ka~~La---~~~~~ 168 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDN-----FA------KDIYVVTRN----PEKTSEIY---GEFKV 168 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHT-----TC------SEEEEEESC----HHHHHHHC---TTSEE
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHc-----CC------CEEEEEeCC----HHHHHHHH---HhcCc
Confidence 78899999889999999999999999988888877653 64 679999874 22211121 11100
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC---C----CCCHHHHHHHHcCCCCcEEEEcC-CCC
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGVG---R----TFTKEVIEAMASFNEKPLILALS-NPT 449 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~---g----~Ft~evv~~Ma~~~erPIIFaLS-NPt 449 (521)
....+|.+ + ++|++|-++..| . .+..+.++ +..+||=+. ||.
T Consensus 169 --~~~~~l~~-l---~~DivInaTp~Gm~~~~~~~pi~~~~l~------~~~~v~DlvY~P~ 218 (282)
T 3fbt_A 169 --ISYDELSN-L---KGDVIINCTPKGMYPKEGESPVDKEVVA------KFSSAVDLIYNPV 218 (282)
T ss_dssp --EEHHHHTT-C---CCSEEEECSSTTSTTSTTCCSSCHHHHT------TCSEEEESCCSSS
T ss_pred --ccHHHHHh-c---cCCEEEECCccCccCCCccCCCCHHHcC------CCCEEEEEeeCCC
Confidence 01112333 2 699999877543 1 14455442 567888765 763
No 62
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.43 E-value=0.15 Score=51.81 Aligned_cols=97 Identities=23% Similarity=0.336 Sum_probs=61.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc----ccCCCCCH
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNL 403 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~----~~~~~~~L 403 (521)
.+...+++|+|+|..|..+|+.+... |. +++++|++- .+ +...+..+.. +.....++
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~-----Ga-------~V~~~d~~~----~~---~~~~~~~~g~~~~~~~~~~~~l 223 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGM-----GA-------QVTILDVNH----KR---LQYLDDVFGGRVITLTATEANI 223 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSEEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCH----HH---HHHHHHhcCceEEEecCCHHHH
Confidence 37789999999999999999887643 52 688888742 11 1111111111 01112357
Q ss_pred HHHhcccCCcEEEEccCCCC-----CCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 404 LDAVKVIKPTILIGSSGVGR-----TFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g-----~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
.++++. .|++|.+.+.++ .++++.++.|. +.-+|.-+|.+
T Consensus 224 ~~~~~~--~DvVi~~~g~~~~~~~~li~~~~l~~mk---~gg~iV~v~~~ 268 (369)
T 2eez_A 224 KKSVQH--ADLLIGAVLVPGAKAPKLVTRDMLSLMK---EGAVIVDVAVD 268 (369)
T ss_dssp HHHHHH--CSEEEECCC-------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred HHHHhC--CCEEEECCCCCccccchhHHHHHHHhhc---CCCEEEEEecC
Confidence 788876 999999876543 46899999995 44566667644
No 63
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.28 E-value=0.13 Score=45.21 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=54.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-ccCCCCCHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~~~~~~~L~ 404 (521)
+.+...+|+|+|+|..|..+|+.+... | .+++++|++- .+.+.+. .....+.. +......|.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~-----g-------~~V~vid~~~----~~~~~~~~~~g~~~~~~d~~~~~~l~ 78 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSS-----G-------HSVVVVDKNE----YAFHRLNSEFSGFTVVGDAAEFETLK 78 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCG----GGGGGSCTTCCSEEEESCTTSHHHHH
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HHHHHHHhcCCCcEEEecCCCHHHHH
Confidence 345668999999999999999988652 4 3688998752 2211121 11111111 111111243
Q ss_pred HH-hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 405 DA-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 405 ea-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
++ ++. +|++|-+.... ..+..+++.+.+.+....|++.+|
T Consensus 79 ~~~~~~--ad~Vi~~~~~~-~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 79 ECGMEK--ADMVFAFTNDD-STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp TTTGGG--CSEEEECSSCH-HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HcCccc--CCEEEEEeCCc-HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 33 444 89999776643 233444444333355555555555
No 64
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=93.26 E-value=0.51 Score=49.16 Aligned_cols=119 Identities=10% Similarity=0.089 Sum_probs=85.6
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 298 TTHLVFNDDI---QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
..|.+.|.-- +.+|=-+++.+++..|..|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+
T Consensus 83 ~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~g~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~ 150 (381)
T 3oet_A 83 AGIGFSAAPGCNAIAVVEYVFSALLMLAERDGFSLRDRTIGIVGVGNVGSRLQTRLEAL-----GI-------RTLLCDP 150 (381)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECH
T ss_pred CCEEEEECCCcCcchhHHHHHHHHHHHHHhcCCccCCCEEEEEeECHHHHHHHHHHHHC-----CC-------EEEEECC
Confidence 3566666533 2445568999999999999999999999999999999999998653 64 5888886
Q ss_pred CCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC--------CCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 375 KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG--------VGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 375 ~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~--------~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.. .. .. ......+|.|+++. .|+++=.-- .-++|+++.++.|. +..|+.=.|
T Consensus 151 ~~------~~-~~--------~~~~~~sl~ell~~--aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk---~gailIN~a 210 (381)
T 3oet_A 151 PR------AA-RG--------DEGDFRTLDELVQE--ADVLTFHTPLYKDGPYKTLHLADETLIRRLK---PGAILINAC 210 (381)
T ss_dssp HH------HH-TT--------CCSCBCCHHHHHHH--CSEEEECCCCCCSSTTCCTTSBCHHHHHHSC---TTEEEEECS
T ss_pred Ch------HH-hc--------cCcccCCHHHHHhh--CCEEEEcCcCCccccccchhhcCHHHHhcCC---CCcEEEECC
Confidence 31 00 00 11223579999987 898874431 34588899999886 677888777
Q ss_pred CC
Q 009982 447 NP 448 (521)
Q Consensus 447 NP 448 (521)
.-
T Consensus 211 RG 212 (381)
T 3oet_A 211 RG 212 (381)
T ss_dssp CG
T ss_pred CC
Confidence 63
No 65
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.14 E-value=0.058 Score=53.99 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=75.4
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhccc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~~v 410 (521)
||.|+|||..|.++|..|+.. |+ ...+.++|.+-=..++-.-++.+...+|-... ....+ .+++++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-----~~-----~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~- 69 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCC-
Confidence 799999999999999887653 54 24799999753111100001222111121110 01135 788887
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 009982 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (521)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (521)
+|++|=+.+.+ |- .-+++++.|.+++.+-+|+-.|||. .....-+++.+. -+-+|++|
T Consensus 70 -aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPv---d~~t~~~~k~~g~p~~rviG~g 143 (294)
T 1oju_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM---DVMTYIMWKESGKPRNEVFGMG 143 (294)
T ss_dssp -CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH---HHHHHHHHHHSCCCTTSEEECS
T ss_pred -CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcc---hHHHHHHHHhcCCCHHHEeecc
Confidence 89887554443 32 1256778889999999999999996 344555555542 24466766
No 66
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=93.11 E-value=0.85 Score=45.60 Aligned_cols=121 Identities=15% Similarity=0.100 Sum_probs=81.5
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhc
Q 009982 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQT 358 (521)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~----------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~ 358 (521)
..++|.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 90 ~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~----- 164 (313)
T 2ekl_A 90 RNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGFGRIGTKVGIIANAM----- 164 (313)
T ss_dssp TTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESCSHHHHHHHHHHHHT-----
T ss_pred CCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEeeCHHHHHHHHHHHHC-----
Confidence 45666664332 2344578888888765 35789999999999999999999988643
Q ss_pred CCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHHHH
Q 009982 359 KAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMA 434 (521)
Q Consensus 359 G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma 434 (521)
|+ +++.+|+.. . . . ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|.
T Consensus 165 G~-------~V~~~d~~~----~--~-~-~~~-~~---g~~~~~l~ell~~--aDvVvl~~P~~~~t~~li~~~~l~~mk 223 (313)
T 2ekl_A 165 GM-------KVLAYDILD----I--R-E-KAE-KI---NAKAVSLEELLKN--SDVISLHVTVSKDAKPIIDYPQFELMK 223 (313)
T ss_dssp TC-------EEEEECSSC----C--H-H-HHH-HT---TCEECCHHHHHHH--CSEEEECCCCCTTSCCSBCHHHHHHSC
T ss_pred CC-------EEEEECCCc----c--h-h-HHH-hc---CceecCHHHHHhh--CCEEEEeccCChHHHHhhCHHHHhcCC
Confidence 54 588888642 1 1 0 000 11 0011379999987 898885532 33678899999886
Q ss_pred cCCCCcEEEEcCC
Q 009982 435 SFNEKPLILALSN 447 (521)
Q Consensus 435 ~~~erPIIFaLSN 447 (521)
+..++.-.|.
T Consensus 224 ---~ga~lIn~ar 233 (313)
T 2ekl_A 224 ---DNVIIVNTSR 233 (313)
T ss_dssp ---TTEEEEESSC
T ss_pred ---CCCEEEECCC
Confidence 5678888877
No 67
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.08 E-value=0.044 Score=55.06 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=67.4
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC--Ccc--ccCCccCCchhchhhccccCCCCCHHHH
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK--GLI--VSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~--GLi--~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
.||+|.|| |..|..++..|+.. |+-...-...++++|.. ..- ..+...+|.+.-.+|..+.....++.++
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~-----~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG-----DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT-----TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC-----CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 58999998 99999988877652 43111112469999975 100 0000001211111222222223578999
Q ss_pred hcccCCcEEEEccCCCC--------------CCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
+++ .|++|=+.+.+. ..++++++.+.+++ .+.+|+-.|||.
T Consensus 81 l~~--aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 81 FKD--ADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp TTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred hCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 998 899886655442 13578889999986 787777789996
No 68
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.06 E-value=0.19 Score=50.33 Aligned_cols=121 Identities=15% Similarity=0.252 Sum_probs=74.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~v 410 (521)
.||.|+|||..|.++|..++.. |+ ...++|+|.+-= ..+...++.+ +... .....++ ++++.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-----g~-----~~ev~L~Di~~~-~~g~a~dl~~----~~~~~i~~t~d~-~~l~~- 77 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-----GI-----ADRLVLLDLSEG-TKGATMDLEI----FNLPNVEISKDL-SASAH- 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECCC------CHHHHHH----HTCTTEEEESCG-GGGTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-----CC-----CCEEEEEcCCcc-hHHHHHHHhh----hcCCCeEEeCCH-HHHCC-
Confidence 6899999999999999998653 54 267999998631 1111111221 1111 1112467 77887
Q ss_pred CCcEEEEccCCC--C-----------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 009982 411 KPTILIGSSGVG--R-----------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (521)
Q Consensus 411 kptvLIG~S~~~--g-----------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (521)
+|++|=..+.+ | -.-+++++.|.++++.-+|+-.|||.. ...+-+++.+. -.-+|++|.
T Consensus 78 -aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~---~~t~~~~~~~~~p~~rviG~gt 151 (303)
T 2i6t_A 78 -SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE---IMTYVTWKLSTFPANRVIGIGC 151 (303)
T ss_dssp -CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHH---HHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHH---HHHHHHHHhcCCCHHHeeCCCC
Confidence 99998655443 1 023678888999999999888999973 44444545321 234677763
No 69
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.96 E-value=0.055 Score=54.13 Aligned_cols=126 Identities=17% Similarity=0.284 Sum_probs=72.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC-CCHHHHhccc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV-NNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~-~~L~eav~~v 410 (521)
.||.|+|||..|.++|..+... |+ ...++++|.+--..+....++.+. .++....... .+..+++++
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-----~~-----~~ev~l~Di~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~~~al~~- 74 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-----GI-----ADEIVLIDANESKAIGDAMDFNHG-KVFAPKPVDIWHGDYDDCRD- 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHHH-TTSSSSCCEEEECCGGGTTT-
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCcchHHHHHhhHHHH-hhhcCCCeEEEcCcHHHhCC-
Confidence 5899999999999999776543 54 257999998521111000012111 1111100000 234567877
Q ss_pred CCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 009982 411 KPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (521)
Q Consensus 411 kptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (521)
+|++|=+.+.+. ...+++++.|.++++.-++|-.|||. -...+-+++.+. -.-+|++|.
T Consensus 75 -aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv---~~~~~~~~~~s~~p~~rviG~gt 149 (316)
T 1ldn_A 75 -ADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPV---DILTYATWKFSGLPHERVIGSGT 149 (316)
T ss_dssp -CSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHTCCGGGEEECTT
T ss_pred -CCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCch---HHHHHHHHHHhCCCHHHEEeccc
Confidence 999986654442 23467888888888888888899996 233344444321 124566654
No 70
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.96 E-value=0.09 Score=52.22 Aligned_cols=100 Identities=13% Similarity=0.302 Sum_probs=64.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccC----CchhchhhccccCC---CCCHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHEHEP---VNNLL 404 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~----l~~~k~~fa~~~~~---~~~L~ 404 (521)
.||.|+|||+.|.++|..++.. |+ .+++++|.+- ++.+. +... ..+...... ..++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~-----g~------~~V~l~D~~~----~~~~~~~~~l~~~-~~~~~~~~~i~~t~d~- 67 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD-----NL------ADVVLFDIAE----GIPQGKALDITHS-MVMFGSTSKVIGTDDY- 67 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSS----SHHHHHHHHHHHH-HHHHTCCCCEEEESCG-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCc----hHHHHHHHHHHhh-hhhcCCCcEEEECCCH-
Confidence 5899999999999999998764 54 1499999852 11110 1000 011110111 1456
Q ss_pred HHhcccCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 405 DAVKVIKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
++++. +|++|=+.+.+. .+.+++++.+.++++.-+|+-.|||..
T Consensus 68 ~a~~~--aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~ 125 (317)
T 2ewd_A 68 ADISG--SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLD 125 (317)
T ss_dssp GGGTT--CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred HHhCC--CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHH
Confidence 77876 899886554432 134678888888888999999999963
No 71
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.75 E-value=0.71 Score=49.59 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=76.1
Q ss_pred HHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCC
Q 009982 323 KLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVN 401 (521)
Q Consensus 323 k~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~ 401 (521)
+..+..+.+.+|+|+|+|..|.++|+.+... |. +++++|++- . +...|+. .-...
T Consensus 266 r~~~~~l~GktV~IiG~G~IG~~~A~~lka~-----Ga-------~Viv~d~~~----~--------~~~~A~~~Ga~~~ 321 (494)
T 3ce6_A 266 RGTDALIGGKKVLICGYGDVGKGCAEAMKGQ-----GA-------RVSVTEIDP----I--------NALQAMMEGFDVV 321 (494)
T ss_dssp HHHCCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSCH----H--------HHHHHHHTTCEEC
T ss_pred hccCCCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H--------HHHHHHHcCCEEe
Confidence 4566788999999999999999999887542 52 688888641 1 1111211 01124
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (521)
++.++++. .|++|-+++..++++++.++.|. +.-+|.-.+... .|+..+..+.
T Consensus 322 ~l~e~l~~--aDvVi~atgt~~~i~~~~l~~mk---~ggilvnvG~~~--~eId~~aL~~ 374 (494)
T 3ce6_A 322 TVEEAIGD--ADIVVTATGNKDIIMLEHIKAMK---DHAILGNIGHFD--NEIDMAGLER 374 (494)
T ss_dssp CHHHHGGG--CSEEEECSSSSCSBCHHHHHHSC---TTCEEEECSSSG--GGBCHHHHHH
T ss_pred cHHHHHhC--CCEEEECCCCHHHHHHHHHHhcC---CCcEEEEeCCCC--CccCHHHHHH
Confidence 68888876 99999998888899999999985 567887777765 4666655443
No 72
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=92.75 E-value=0.91 Score=47.72 Aligned_cols=114 Identities=22% Similarity=0.272 Sum_probs=80.7
Q ss_pred ChhhhHHHHHHHHHHHHHhcCCCeeeeeecCCCccHHH---HHHHHc---CCC-c---eeccC----------CCchHHH
Q 009982 254 TGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFE---LLAKYG---TTH-L---VFNDD----------IQGTASV 313 (521)
Q Consensus 254 ~g~~y~~~idefv~av~~~fGp~~lIq~EDf~~~~af~---iL~ryr---~~~-~---~FnDD----------iQGTaaV 313 (521)
+-+|-..|...|+.++.+.-||..-|-=+|++.. ... +.+.|+ ... + ++--+ -.-||-=
T Consensus 115 s~~e~~~~~r~f~~~l~~~~g~~~dv~a~D~gt~-~~~m~~~~~~y~~~~~~~~~~~~~~tGk~~~~GGs~~~~~aTg~G 193 (419)
T 1gtm_A 115 SDREKERLARGYIRAIYDVISPYEDIPAPDVYTN-PQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARG 193 (419)
T ss_dssp CHHHHHHHHHHHHHHHGGGCBTTTEECCBCTTCC-HHHHHHHHHHHHHHHTTSSCGGGGCSSCCGGGTCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCcEEeCCCCCCC-HHHHHHHHHHHHHhhCCCCCccceEecCcchhCCCCCCCcchhhH
Confidence 4456678889999999998899888889999873 222 234552 221 2 33222 1236666
Q ss_pred HHHHHHHHHHHhCCC-cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEE-ecCCccc
Q 009982 314 VLAGVVAALKLIGGT-LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLV-DSKGLIV 379 (521)
Q Consensus 314 ~LAgll~Alk~~g~~-L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lv-Ds~GLi~ 379 (521)
+.-++..+++..|.+ |++.++.|+|.|..|..+|+++...+ |+ +++.+ |+.|-+.
T Consensus 194 v~~~~~~~~~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~----G~-------kVv~~sD~~g~~~ 250 (419)
T 1gtm_A 194 ASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDF----GM-------KVVAVSDSKGGIY 250 (419)
T ss_dssp HHHHHHHHHHHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTT----CC-------EEEEEECSSCEEE
T ss_pred HHHHHHHHHHHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhc----CC-------EEEEEeCCCcccc
Confidence 666778888999999 99999999999999999999886511 54 45544 8877544
No 73
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.71 E-value=0.23 Score=47.22 Aligned_cols=109 Identities=15% Similarity=0.211 Sum_probs=62.2
Q ss_pred hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc--ccCCccCCc-hhchhhcccc--CC
Q 009982 325 IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI--VSSRKDSLQ-HFKKPWAHEH--EP 399 (521)
Q Consensus 325 ~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi--~~~R~~~l~-~~k~~fa~~~--~~ 399 (521)
...++...||.|+|+|..|.++|..|... | .+++++|++--- .......+. .....++... ..
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~-----G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADL-----G-------HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH 80 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee
Confidence 45578889999999999999999998763 5 368888875211 000000000 0012232221 12
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHH-HcCCCCcEEEEcCCCC
Q 009982 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAM-ASFNEKPLILALSNPT 449 (521)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~M-a~~~erPIIFaLSNPt 449 (521)
..++.|+++. +|++| ++..+. ...++++.+ +..-+..+|.-+|||.
T Consensus 81 ~~~~~e~~~~--aDvVi-lavp~~-~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 LAAFADVAAG--AELVV-NATEGA-SSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp EEEHHHHHHH--CSEEE-ECSCGG-GHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred ccCHHHHHhc--CCEEE-EccCcH-HHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 3578999987 89887 444332 334666665 3333677999999974
No 74
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.66 E-value=0.062 Score=53.47 Aligned_cols=125 Identities=15% Similarity=0.237 Sum_probs=74.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec--CCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 333 riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
||+|.| ||..|..++..|+. .|+ ...++++|. +-=-.++-..++.+... +..+..-..+-.+++++
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~v~~~~~~a~~~ 70 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIAL-----RDI-----ADEVVFVDIPDKEDDTVGQAADTNHGIA-YDSNTRVRQGGYEDTAG 70 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TTC-----CSEEEEECCGGGHHHHHHHHHHHHHHHT-TTCCCEEEECCGGGGTT
T ss_pred EEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEcCCCChhhHHHHHHHHHHHHh-hCCCcEEEeCCHHHhCC
Confidence 899999 99999999887754 243 246999997 31000000001221111 11110000122677877
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 009982 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (521)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsGS 473 (521)
+|++|=+.+.+ |. .++++++.|.+++.+.+|+--|||. ....+-+++.+ .-.-+|++|.
T Consensus 71 --aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv---~~~~~~~~~~~~~p~~rviG~gt 145 (303)
T 1o6z_A 71 --SDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV---DLLNRHLYEAGDRSREQVIGFGG 145 (303)
T ss_dssp --CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH---HHHHHHHHHHSSSCGGGEEECCH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH---HHHHHHHHHHcCCCHHHeeeccc
Confidence 99998666544 32 4678889999999999999999996 33444454543 1124777753
No 75
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.63 E-value=0.091 Score=52.96 Aligned_cols=128 Identities=16% Similarity=0.236 Sum_probs=75.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc--cCCCCCHHHHhcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~--~~~~~~L~eav~~ 409 (521)
.||.|+|||+.|.++|.+++.. |+ -+++++|.+-=..+.-...+.+...++... -....++ +++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-----g~------~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-----DL------GDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCC
Confidence 5899999999999999887653 54 139999985211110000111111111111 0111466 78887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 009982 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (521)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsGS 473 (521)
+|++|=+.+.+ |. +-+++.+.+.++++.-+|+--|||... ..+-+.+.+ .-.-+|++|+
T Consensus 83 --aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~---~t~~~~~~~~~~~~rviG~~t 157 (328)
T 2hjr_A 83 --SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDA---MVYYFKEKSGIPANKVCGMSG 157 (328)
T ss_dssp --CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHH---HHHHHHHHHCCCGGGEEESCH
T ss_pred --CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHH---HHHHHHHhcCCChhhEEEeCc
Confidence 89988554332 21 246788888888888887767999732 244444433 3455788886
Q ss_pred CCC
Q 009982 474 PFD 476 (521)
Q Consensus 474 Pf~ 476 (521)
+.+
T Consensus 158 ~Ld 160 (328)
T 2hjr_A 158 VLD 160 (328)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 76
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=92.56 E-value=0.2 Score=48.10 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=64.9
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
.|++.+++..|.++++ +++|+|+|.+|..+|..+... |. +++++|+.- ++ .....+.|..
T Consensus 102 ~g~~~~l~~~~~~l~~-~v~iiG~G~~g~~~a~~l~~~-----g~-------~v~v~~r~~----~~---~~~l~~~~~~ 161 (263)
T 2d5c_A 102 PGFLEALKAGGIPLKG-PALVLGAGGAGRAVAFALREA-----GL-------EVWVWNRTP----QR---ALALAEEFGL 161 (263)
T ss_dssp HHHHHHHHHTTCCCCS-CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCC-eEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECCH----HH---HHHHHHHhcc
Confidence 5888889888889999 999999999999999887652 42 588888741 11 1111112211
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCCCC--HHHHHHHHcCCCCcEEEEcCC
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRTFT--KEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft--~evv~~Ma~~~erPIIFaLSN 447 (521)
. ..++.++ +. +|++|-+...+ ... ++++. .....+..+|+-++.
T Consensus 162 ~---~~~~~~~-~~--~Divi~~tp~~-~~~~~~~~l~-~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 162 R---AVPLEKA-RE--ARLLVNATRVG-LEDPSASPLP-AELFPEEGAAVDLVY 207 (263)
T ss_dssp E---ECCGGGG-GG--CSEEEECSSTT-TTCTTCCSSC-GGGSCSSSEEEESCC
T ss_pred c---hhhHhhc-cC--CCEEEEccCCC-CCCCCCCCCC-HHHcCCCCEEEEeec
Confidence 1 3467777 55 99999776644 211 01221 122235567877763
No 77
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=92.56 E-value=0.19 Score=49.77 Aligned_cols=48 Identities=33% Similarity=0.392 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
.|++.+++-.|.++++.|+|++|||-|+-+|+-.|.+. |. ++|+++++
T Consensus 110 ~Gf~~~L~~~g~~~~~~~~lilGaGGaarai~~aL~~~-----g~------~~i~i~nR 157 (269)
T 3tum_A 110 AGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEA-----GI------ASITLCDP 157 (269)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEECS
T ss_pred HHHHHHHHHhCCCcccCeEEEEecHHHHHHHHHHHHHh-----CC------CeEEEeCC
Confidence 46778888889999999999999999999998777653 54 68999987
No 78
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.50 E-value=0.11 Score=52.46 Aligned_cols=126 Identities=15% Similarity=0.269 Sum_probs=74.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|||..|..++-+|+.. ++ ...++|+|.+-=-.++...+|.+. .+|..+..-..+-.+++++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~~a~~~-- 76 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEYSDAKD-- 76 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGGG--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6999999999999998877543 44 268999998410000000012211 1232211001244677887
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 009982 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (521)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsGS 473 (521)
+|++|=+.+.+.. .-+++++.|.+++...+|+-.|||. -...+-+++.+ .-.-+|.+|.
T Consensus 77 aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 151 (326)
T 2zqz_A 77 ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp CSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEEccc
Confidence 9999866554422 2346777788889999999999996 23444555543 1124666654
No 79
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.41 E-value=0.13 Score=51.85 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=76.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhcccc--CCCCCHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEH--EPVNNLLD 405 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~--~~~~~L~e 405 (521)
.||.|+|||+.|.++|.+++.. |+ + +++++|.+ .++-+ .+.+...+..... ....++ +
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~-----g~----~--~v~L~Di~----~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~ 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK-----NL----G--DVVLFDIV----KNMPHGKALDTSHTNVMAYSNCKVSGSNTY-D 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSS----SSHHHHHHHHHHTHHHHHTCCCCEEEECCG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCC----HHHHHHHHHHHHhhhhhcCCCcEEEECCCH-H
Confidence 4899999999999999888763 54 1 39999975 22111 1111100111110 011467 7
Q ss_pred HhcccCCcEEEEccCCC---CC----------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--C
Q 009982 406 AVKVIKPTILIGSSGVG---RT----------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--K 464 (521)
Q Consensus 406 av~~vkptvLIG~S~~~---g~----------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~ 464 (521)
++++ +|++|=+.+.+ |. +-+++.+.|.++++.-+|+-.|||... ..+-+.+.+ .
T Consensus 69 al~~--aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~---~t~~~~~~~g~~ 143 (322)
T 1t2d_A 69 DLAG--ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDV---MVQLLHQHSGVP 143 (322)
T ss_dssp GGTT--CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHH---HHHHHHHHHCCC
T ss_pred HhCC--CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHH---HHHHHHHhcCCC
Confidence 8887 99988654333 31 357788888889988888778999743 234444444 3
Q ss_pred CcEEEecCCCCC
Q 009982 465 GRAIFASGSPFD 476 (521)
Q Consensus 465 G~aifAsGSPf~ 476 (521)
..-+|++|...+
T Consensus 144 ~~rviG~gt~ld 155 (322)
T 1t2d_A 144 KNKIIGLGGVLD 155 (322)
T ss_dssp GGGEEECCHHHH
T ss_pred hHHEEeccCccc
Confidence 445788875444
No 80
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.34 E-value=0.13 Score=49.74 Aligned_cols=102 Identities=24% Similarity=0.328 Sum_probs=61.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccC---Cc-----cCCchhchhhcc----
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RK-----DSLQHFKKPWAH---- 395 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~---R~-----~~l~~~k~~fa~---- 395 (521)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+=+ ..+ |. +++-..|..-+.
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~-----Gv------g~i~lvD~d~v-~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~ 92 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGA-----GV------GTLVLADDDDV-HLSNLQRQILFTTEDIDRPKSQVSQQRLT 92 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHT-----TC------SEEEEECCCBC-CGGGTTTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHc-----CC------CeEEEEeCCCc-ccccCCCCccCChhhCCCHHHHHHHHHHH
Confidence 56788999999999999999999875 75 68999998732 211 10 001111111000
Q ss_pred c----------cCCC--CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 009982 396 E----------HEPV--NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (521)
Q Consensus 396 ~----------~~~~--~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (521)
. .... .++.+.++. .|++|-++. ..-++..+...+.....|+|.+-
T Consensus 93 ~~np~~~v~~~~~~~~~~~~~~~~~~--~DvVi~~~d--~~~~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 93 QLNPDIQLTALQQRLTGEALKDAVAR--ADVVLDCTD--NMATRQEINAACVALNTPLITAS 150 (251)
T ss_dssp HHCTTSEEEEECSCCCHHHHHHHHHH--CSEEEECCS--SHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHCCCCEEEEEeccCCHHHHHHHHhc--CCEEEECCC--CHHHHHHHHHHHHHhCCCEEEEe
Confidence 0 0011 135556665 788887654 22355666666666678888754
No 81
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.34 E-value=0.1 Score=52.19 Aligned_cols=128 Identities=14% Similarity=0.270 Sum_probs=76.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-cccCCCCCHHHHhc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVK 408 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~~~~~~~~L~eav~ 408 (521)
...||.|+|||..|..+|-.|+.. |+ ...++++|.+-=..++....+.+. .+|. ++..-..+..++++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~-----~~-----~~ei~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~~~~~a~~ 73 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQ-----SI-----VDELVIIDLDTEKVRGDVMDLKHA-TPYSPTTVRVKAGEYSDCH 73 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-----CS-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSSSCCEEEECCGGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHhhhhhhhHHhh-hhhcCCCeEEEeCCHHHhC
Confidence 456999999999999998877542 54 257999997520001100012222 2332 11000014477788
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecC
Q 009982 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASG 472 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsG 472 (521)
+ +|++|=+.+.+.. +=+++++.|.+++..-+|+-.|||. -...+-+++.+ .-.-+|.+|
T Consensus 74 ~--aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~t~~~~k~~~~p~~rviG~g 148 (317)
T 3d0o_A 74 D--ADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPV---DILAYATWKFSGLPKERVIGSG 148 (317)
T ss_dssp T--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECT
T ss_pred C--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHhCCCHHHEEecC
Confidence 7 9999865554422 2246777888899999999999996 23444555543 112467776
Q ss_pred C
Q 009982 473 S 473 (521)
Q Consensus 473 S 473 (521)
.
T Consensus 149 t 149 (317)
T 3d0o_A 149 T 149 (317)
T ss_dssp T
T ss_pred c
Confidence 4
No 82
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.26 E-value=0.14 Score=51.57 Aligned_cols=126 Identities=13% Similarity=0.246 Sum_probs=74.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|||..|..++-+|+.. ++ ...++|+|.+-=-.++-..+|.+. .+|..+..-..+..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~~a~~~-- 72 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ-----GI-----AEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEYSDCKD-- 72 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHcC-----CC-----CCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCHHHhCC--
Confidence 6999999999999988887553 44 268999997410000000012211 1232211001244677887
Q ss_pred CcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 009982 412 PTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (521)
Q Consensus 412 ptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsGS 473 (521)
+|++|=+.+.+.. +-+++++.|.+++...+|+-.|||. -...+-+++.+ .-+-+|.+|.
T Consensus 73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 147 (318)
T 1ez4_A 73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPV---DILTYATWKFSGFPKERVIGSGT 147 (318)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcH---HHHHHHHHHHcCCCHHHEEeccc
Confidence 9999855544421 2346777888899999999999996 23444555543 1124677765
No 83
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=92.23 E-value=0.52 Score=47.35 Aligned_cols=113 Identities=15% Similarity=0.169 Sum_probs=71.6
Q ss_pred HHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch-hchhhcccc
Q 009982 319 VAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAHEH 397 (521)
Q Consensus 319 l~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~fa~~~ 397 (521)
+++-.+..+ ...+++|+|+|..|-.+++.+... .++ ++|+++|+. +.+.+.. .+..+--+.
T Consensus 111 laa~~La~~--~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~------~a~~la~~l~~~~g~~~ 172 (313)
T 3hdj_A 111 LAAGALARP--RSSVLGLFGAGTQGAEHAAQLSAR----FAL------EAILVHDPY------ASPEILERIGRRCGVPA 172 (313)
T ss_dssp HHHHHHSCT--TCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECTT------CCHHHHHHHHHHHTSCE
T ss_pred HHHHhhccC--CCcEEEEECccHHHHHHHHHHHHh----CCC------cEEEEECCc------HHHHHHHHHHHhcCCeE
Confidence 444444332 457999999999999888877653 232 789999996 2121211 111111111
Q ss_pred CCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHHH
Q 009982 398 EPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEEA 459 (521)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectpe~A 459 (521)
... ++.|+++. .|++|-++... .+|..+++ .+..+|..++. |. +-|+.++-.
T Consensus 173 ~~~-~~~eav~~--aDIVi~aT~s~~pvl~~~~l------~~G~~V~~vGs~~p~-~~El~~~~~ 227 (313)
T 3hdj_A 173 RMA-APADIAAQ--ADIVVTATRSTTPLFAGQAL------RAGAFVGAIGSSLPH-TRELDDEAL 227 (313)
T ss_dssp EEC-CHHHHHHH--CSEEEECCCCSSCSSCGGGC------CTTCEEEECCCSSTT-CCCCCHHHH
T ss_pred EEe-CHHHHHhh--CCEEEEccCCCCcccCHHHc------CCCcEEEECCCCCCc-hhhcCHHHH
Confidence 223 89999998 99999776433 35665543 36789998876 44 589998754
No 84
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=92.18 E-value=0.14 Score=54.48 Aligned_cols=106 Identities=16% Similarity=0.280 Sum_probs=67.4
Q ss_pred cccceEEEeCcchH--HHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc---ccCCCCCH
Q 009982 329 LAEHRFLFLGAGEA--GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH---EHEPVNNL 403 (521)
Q Consensus 329 L~d~riv~~GAGsA--g~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~---~~~~~~~L 403 (521)
++..||.|+|||+. |.|++..|+.. ..+ . ..|+|+|.+- ++-+.+....+.+.+ .-....++
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~----~~~----~-geV~L~Di~~----e~le~~~~~~~~l~~~~~~I~~TtD~ 69 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSID----ERM----S-GTVALYDLDF----EAAQKNEVIGNHSGNGRWRYEAVSTL 69 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHC----SSC----C-EEEEEECSSH----HHHHHHHHHHTTSTTSCEEEEEESSH
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhc----ccc----C-CeEEEEeCCH----HHHHHHHHHHHHHhccCCeEEEECCH
Confidence 35679999999995 78999888752 122 2 3899999752 110000000001111 01112589
Q ss_pred HHHhcccCCcEEEEccCCC---------------CC---------------------CCHHHHHHHHcCCCCcEEEEcCC
Q 009982 404 LDAVKVIKPTILIGSSGVG---------------RT---------------------FTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~---------------g~---------------------Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.||+++ +|++|=.-.+| |. .-.++++.|.+++.+-+++-.||
T Consensus 70 ~eAl~d--ADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tN 147 (450)
T 3fef_A 70 KKALSA--ADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTN 147 (450)
T ss_dssp HHHHTT--CSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHhcC--CCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998 89888544322 22 13577888889999999999999
Q ss_pred CC
Q 009982 448 PT 449 (521)
Q Consensus 448 Pt 449 (521)
|.
T Consensus 148 Pv 149 (450)
T 3fef_A 148 PM 149 (450)
T ss_dssp SH
T ss_pred ch
Confidence 97
No 85
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.14 E-value=0.08 Score=44.54 Aligned_cols=103 Identities=13% Similarity=0.173 Sum_probs=53.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH-
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA- 406 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea- 406 (521)
++..+|+|+|+|..|..+++.+... | .+++++|++- .+.+.+......+.. +......|.++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~-----g-------~~v~~~d~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 67 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRM-----G-------HEVLAVDINE----EKVNAYASYATHAVIANATEENELLSLG 67 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHT-----T-------CCCEEEESCH----HHHHTTTTTCSEEEECCTTCHHHHHTTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCH----HHHHHHHHhCCEEEEeCCCCHHHHHhcC
Confidence 4567899999999999999888652 4 2578888742 111111111011111 11111223333
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
++ ++|++|=+.+..-..+..+++...+.+...||...+||.
T Consensus 68 ~~--~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~ 108 (144)
T 2hmt_A 68 IR--NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYY 108 (144)
T ss_dssp GG--GCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHH
T ss_pred CC--CCCEEEECCCCchHHHHHHHHHHHHcCCCeEEEEeCCHH
Confidence 33 489999665532012233444444455566777677765
No 86
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=92.07 E-value=1.2 Score=44.73 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=78.4
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHHh---------------------CCCcccceEEEeCcchHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQG---TASVVLAGVVAALKLI---------------------GGTLAEHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~~---------------------g~~L~d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
..++|.|----. +|=-+++.+|+..|-. |..|.+.+|.|+|+|..|..+|+.+..
T Consensus 98 ~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~- 176 (330)
T 2gcg_A 98 RGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKP- 176 (330)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHHHHHHHHHHGG-
T ss_pred CCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHHHHHHHHHHHH-
Confidence 567777764333 3444788888876622 356889999999999999999998754
Q ss_pred HHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHH
Q 009982 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (521)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (521)
.|. +++.+|+.. .+ ....+ .+ .... .+|.|+++. .|++|=.-. ..+.++++.
T Consensus 177 ----~G~-------~V~~~d~~~----~~---~~~~~-~~--g~~~-~~l~e~l~~--aDvVi~~vp~~~~t~~~i~~~~ 232 (330)
T 2gcg_A 177 ----FGV-------QRFLYTGRQ----PR---PEEAA-EF--QAEF-VSTPELAAQ--SDFIVVACSLTPATEGLCNKDF 232 (330)
T ss_dssp ----GTC-------CEEEEESSS----CC---HHHHH-TT--TCEE-CCHHHHHHH--CSEEEECCCCCTTTTTCBSHHH
T ss_pred ----CCC-------EEEEECCCC----cc---hhHHH-hc--Ccee-CCHHHHHhh--CCEEEEeCCCChHHHHhhCHHH
Confidence 253 588888642 11 11111 11 0011 278898887 898875432 135778888
Q ss_pred HHHHHcCCCCcEEEEcCC
Q 009982 430 IEAMASFNEKPLILALSN 447 (521)
Q Consensus 430 v~~Ma~~~erPIIFaLSN 447 (521)
++.|. +..++.-.|+
T Consensus 233 ~~~mk---~gailIn~sr 247 (330)
T 2gcg_A 233 FQKMK---ETAVFINISR 247 (330)
T ss_dssp HHHSC---TTCEEEECSC
T ss_pred HhcCC---CCcEEEECCC
Confidence 88885 4567766665
No 87
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.88 E-value=0.22 Score=49.69 Aligned_cols=101 Identities=16% Similarity=0.366 Sum_probs=61.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc---hhchhhccccC-CCCCHHHHhc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---HFKKPWAHEHE-PVNNLLDAVK 408 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~---~~k~~fa~~~~-~~~~L~eav~ 408 (521)
||.|+|||+.|.++|..++.. |. ...++++|.+- ++.+.+. .+-.++..... ...+ .++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-----g~-----~~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~ 66 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-----GF-----AREMVLIDVDK----KRAEGDALDLIHGTPFTRRANIYAGD-YADLK 66 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSSH----HHHHHHHHHHHHHGGGSCCCEEEECC-GGGGT
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCCh----HHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhC
Confidence 799999999999999988664 53 24799999851 1101010 00001110000 0124 35666
Q ss_pred ccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 409 VIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
. +|++|=+...+.. .-+++++.|.++++.-+|+-.|||..
T Consensus 67 ~--aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 67 G--SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120 (319)
T ss_dssp T--CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHH
T ss_pred C--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHH
Confidence 5 8988855444331 12788899988888888888999974
No 88
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.87 E-value=0.2 Score=50.23 Aligned_cols=122 Identities=22% Similarity=0.351 Sum_probs=72.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhccccCCCCCHHHHh
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~~~~~~L~eav 407 (521)
.||.|+|||..|..+|-+++.. |+ ...++++|.+ .++.+ +|.+.. +|.++..-..+-.+++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~ev~L~Di~----~~~~~g~~~dl~~~~-~~~~~~~i~~~~~~a~ 72 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-----QT-----ANELVLIDVF----KEKAIGEAMDINHGL-PFMGQMSLYAGDYSDV 72 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-----SSEEEEECCC-------CCHHHHHHTTSC-CCTTCEEEC--CGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCC----hHHHHHHHHHHHHhH-HhcCCeEEEECCHHHh
Confidence 5899999999999988887552 44 2579999975 22211 111111 1221110001226678
Q ss_pred cccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEec
Q 009982 408 KVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFAS 471 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAs 471 (521)
++ +|++|=+.+.+..- -+++++.|.+++..-+|+-.|||. -.+.+-+++.+ .-.-+|.+
T Consensus 73 ~~--aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv---~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 73 KD--CDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPV---DIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp TT--CSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSH---HHHHHHHHHHHTCCTTTEEEC
T ss_pred CC--CCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcH---HHHHHHHHHHcCCCHHHEecc
Confidence 77 99998655544211 268889999999999999999995 33444454543 12246666
Q ss_pred CC
Q 009982 472 GS 473 (521)
Q Consensus 472 GS 473 (521)
|.
T Consensus 148 gt 149 (318)
T 1y6j_A 148 GT 149 (318)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 89
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=91.85 E-value=1.9 Score=43.33 Aligned_cols=93 Identities=12% Similarity=0.173 Sum_probs=61.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.+|.|+|+|..|..+|+.+... |. +++.+|+.. .. + .. ..+ .-...+|.+
T Consensus 145 ~~~l~g~~vgIIG~G~iG~~iA~~l~~~-----G~-------~V~~~d~~~----~~-~---~~-~~~---g~~~~~l~~ 200 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGRIGQAIAKRAKGF-----NM-------RILYYSRTR----KE-E---VE-REL---NAEFKPLED 200 (334)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSC----CH-H---HH-HHH---CCEECCHHH
T ss_pred ccCCCCCEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEECCCc----ch-h---hH-hhc---CcccCCHHH
Confidence 4578899999999999999999988642 53 688888742 11 0 00 011 001247888
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+++. +|+++=.-. ..+.++++.++.|. +..+|.-.|.
T Consensus 201 ~l~~--aDvVil~vp~~~~t~~~i~~~~~~~mk---~~ailIn~sr 241 (334)
T 2dbq_A 201 LLRE--SDFVVLAVPLTRETYHLINEERLKLMK---KTAILINIAR 241 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred HHhh--CCEEEECCCCChHHHHhhCHHHHhcCC---CCcEEEECCC
Confidence 8887 888874431 12577788888885 5667776664
No 90
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.83 E-value=0.8 Score=43.14 Aligned_cols=92 Identities=11% Similarity=0.203 Sum_probs=54.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
..||.|+|+|..|..+|..+... |.. ...+++++|+.- ++ + ......++.++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~-----g~~---~~~~v~~~~~~~----~~----------~--g~~~~~~~~~~~~~- 58 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA-----NII---KKENLFYYGPSK----KN----------T--TLNYMSSNEELARH- 58 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH-----TSS---CGGGEEEECSSC----CS----------S--SSEECSCHHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----CCC---CCCeEEEEeCCc----cc----------C--ceEEeCCHHHHHhc-
Confidence 35899999999999999988764 420 014688888741 11 0 00012356666665
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
+|++| ++..+ ...+++++.+..+.+..+|+.++|..+
T Consensus 59 -~D~vi-~~v~~-~~~~~v~~~l~~~l~~~~vv~~~~gi~ 95 (262)
T 2rcy_A 59 -CDIIV-CAVKP-DIAGSVLNNIKPYLSSKLLISICGGLN 95 (262)
T ss_dssp -CSEEE-ECSCT-TTHHHHHHHSGGGCTTCEEEECCSSCC
T ss_pred -CCEEE-EEeCH-HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 67665 33323 345666666655444556666666653
No 91
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.78 E-value=0.048 Score=53.13 Aligned_cols=32 Identities=25% Similarity=0.272 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.+||..++.. |. +++++|+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-----G~-------~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-----GF-------AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 6899999999999999998764 53 68888874
No 92
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.72 E-value=0.13 Score=55.20 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=75.3
Q ss_pred cceEEEeCcchHH--HHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-c--ccCC---CCC
Q 009982 331 EHRFLFLGAGEAG--TGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNN 402 (521)
Q Consensus 331 d~riv~~GAGsAg--~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~--~~~~---~~~ 402 (521)
..||.|+|||+.| .++|..|+.. .++ +...++|+|.+- ++-+........+. . .... ..+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~----~~l----~~~eV~L~Di~~----e~l~~~~~~~~~~l~~~~~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKT----PGL----SGSTVTLMDIDE----ERLDAILTIAKKYVEEVGADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTC----GGG----TTCEEEEECSCH----HHHHHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhc----CcC----CCCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCcEEEEECC
Confidence 3589999999965 4456666531 122 236799999853 11111111111111 1 0111 257
Q ss_pred HHHHhcccCCcEEEEccCC---------------CCCCC-------------------------HHHHHHHHcCCCCcEE
Q 009982 403 LLDAVKVIKPTILIGSSGV---------------GRTFT-------------------------KEVIEAMASFNEKPLI 442 (521)
Q Consensus 403 L~eav~~vkptvLIG~S~~---------------~g~Ft-------------------------~evv~~Ma~~~erPII 442 (521)
+.+++++ +|++|=..+. .|.|. +++++.|.++|..-+|
T Consensus 71 ~~eal~d--AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 71 LDDVIID--ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp HHHHHTT--CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHhCC--CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 8899987 9998855532 12332 6899999999999999
Q ss_pred EEcCCCCCCCCCCHHHHhcccCCcEEEecC
Q 009982 443 LALSNPTSQSECTAEEAYTWSKGRAIFASG 472 (521)
Q Consensus 443 FaLSNPt~~~Ectpe~A~~wt~G~aifAsG 472 (521)
+-.|||. -+..+-+.++.. .-+|.+|
T Consensus 149 i~~TNPv---di~t~~~~k~p~-~rviG~c 174 (480)
T 1obb_A 149 LQAANPI---FEGTTLVTRTVP-IKAVGFC 174 (480)
T ss_dssp EECSSCH---HHHHHHHHHHSC-SEEEEEC
T ss_pred EEeCCcH---HHHHHHHHHCCC-CcEEecC
Confidence 9999997 244445555543 4566665
No 93
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.63 E-value=0.29 Score=47.48 Aligned_cols=49 Identities=18% Similarity=0.269 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-.|++.+|+-.|.++++.+++|+|||.+|.++|..+.+. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~-----G-------~~V~v~~R~ 151 (271)
T 1nyt_A 103 GVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSL-----D-------CAVTITNRT 151 (271)
T ss_dssp HHHHHHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred HHHHHHHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHc-----C-------CEEEEEECC
Confidence 567788888888899999999999998888888877653 4 368888874
No 94
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.57 E-value=0.2 Score=50.97 Aligned_cols=127 Identities=15% Similarity=0.256 Sum_probs=76.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
..||.|+|||..|..+|..|+.. |+ ...+.++|..-=..++-.-+|.+. .+|.....-..+..+++++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a~~~- 76 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ-----GI-----AQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSDAKD- 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHHhcC-
Confidence 46899999999999999888764 54 257999998311011000012222 1232211111234567777
Q ss_pred CCcEEEEccCCC---C-----CC------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 009982 411 KPTILIGSSGVG---R-----TF------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (521)
Q Consensus 411 kptvLIG~S~~~---g-----~F------t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (521)
+|++|=+.+.+ | +| -+++++.|.+++.+.+|+-.|||. .+..+-+++++. -+-+|++|.
T Consensus 77 -aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPv---di~t~~~~k~~g~p~~rviG~gt 151 (326)
T 3vku_A 77 -ADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPV---DILTYATWKLSGFPKNRVVGSGT 151 (326)
T ss_dssp -CSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred -CCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCch---HHHHHHHHHhcCCCHHHeeeecc
Confidence 89887554433 2 23 368888999999999999999996 345555555541 134677654
No 95
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.50 E-value=0.061 Score=56.98 Aligned_cols=127 Identities=13% Similarity=0.187 Sum_probs=77.5
Q ss_pred ceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc--c-cCC---CCCHH
Q 009982 332 HRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH--E-HEP---VNNLL 404 (521)
Q Consensus 332 ~riv~~GAGsA-g~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~--~-~~~---~~~L~ 404 (521)
.||.|+|||+. +.+++..|+.. ..++. ...++|+|.+-- +++.+.+......+.. . ... ..++.
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~---~~~l~----~~ev~L~Di~~~--~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~ 78 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKR---YHELP----VGELWLVDIPEG--KEKLEIVGALAKRMVEKAGVPIEIHLTLDRR 78 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHT---TTTCC----EEEEEEECCGGG--HHHHHHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CCCCC----CCEEEEEEcCCC--hHHHHHHHHHHHHHHhhcCCCcEEEEeCCHH
Confidence 58999999997 55555555431 12442 357999998530 0111111111122211 1 111 25788
Q ss_pred HHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 405 DAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
+++++ +|++|=..+.++. .-+++++.|.++|..-+|+-.|||.
T Consensus 79 eal~g--AD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPv- 155 (450)
T 1s6y_A 79 RALDG--ADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPA- 155 (450)
T ss_dssp HHHTT--CSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH-
T ss_pred HHhCC--CCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH-
Confidence 99998 9999866665421 1358889999999999999999997
Q ss_pred CCCCCHHHHhcccCCcEEEecC
Q 009982 451 QSECTAEEAYTWSKGRAIFASG 472 (521)
Q Consensus 451 ~~Ectpe~A~~wt~G~aifAsG 472 (521)
-+..+-+++.+.-.-+|.+|
T Consensus 156 --divT~a~~k~~p~~rViG~c 175 (450)
T 1s6y_A 156 --GMVTEAVLRYTKQEKVVGLC 175 (450)
T ss_dssp --HHHHHHHHHHCCCCCEEECC
T ss_pred --HHHHHHHHHhCCCCCEEEeC
Confidence 24445555666433677765
No 96
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.19 E-value=0.25 Score=48.15 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-.|++.+|+-.|..++..+++|+|||.+|.++|..|++. | .+++++|+.
T Consensus 103 ~~G~~~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~-----G-------~~v~v~~R~ 151 (272)
T 1p77_A 103 GIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQA-----Q-------QNIVLANRT 151 (272)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHT-----T-------CEEEEEESS
T ss_pred HHHHHHHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 467888888888889999999999999999888887653 4 468888874
No 97
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.03 E-value=0.31 Score=49.73 Aligned_cols=115 Identities=16% Similarity=0.162 Sum_probs=71.3
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
++.+++..+. +....++.|+|+|..|..+++.+... .+. ++++++|+. .++ .....+.|..
T Consensus 116 ~s~laa~~la--~~~~~~v~iIGaG~~a~~~a~al~~~----~~~------~~V~V~~r~----~~~---a~~la~~~~~ 176 (350)
T 1x7d_A 116 TSLMAAQALA--RPNARKMALIGNGAQSEFQALAFHKH----LGI------EEIVAYDTD----PLA---TAKLIANLKE 176 (350)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSTTHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHTT
T ss_pred HHHHHHHHhc--cccCCeEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHHHh
Confidence 4455665553 24568999999999999988777543 232 678888873 222 2222223321
Q ss_pred --c--cCCCCCHHHHhcccCCcEEEEccCCC---CCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCHHH
Q 009982 396 --E--HEPVNNLLDAVKVIKPTILIGSSGVG---RTFTKEVIEAMASFNEKPLILALSN--PTSQSECTAEE 458 (521)
Q Consensus 396 --~--~~~~~~L~eav~~vkptvLIG~S~~~---g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectpe~ 458 (521)
. .....++.|+++. +|++|=++..+ .+|+.++++ +.-.|+.++. |. +-|+.++-
T Consensus 177 ~~g~~~~~~~~~~eav~~--aDiVi~aTps~~~~pvl~~~~l~------~G~~V~~vgs~~p~-~~El~~~~ 239 (350)
T 1x7d_A 177 YSGLTIRRASSVAEAVKG--VDIITTVTADKAYATIITPDMLE------PGMHLNAVGGDCPG-KTELHADV 239 (350)
T ss_dssp CTTCEEEECSSHHHHHTT--CSEEEECCCCSSEEEEECGGGCC------TTCEEEECSCCBTT-BEEECHHH
T ss_pred ccCceEEEeCCHHHHHhc--CCEEEEeccCCCCCceecHHHcC------CCCEEEECCCCCCC-ceeeCHHH
Confidence 0 1224689999987 99999776543 234544332 4458888886 65 67887643
No 98
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=90.99 E-value=0.086 Score=56.23 Aligned_cols=126 Identities=17% Similarity=0.253 Sum_probs=77.5
Q ss_pred cceEEEeCcchH-HHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-c--ccCC---CCCH
Q 009982 331 EHRFLFLGAGEA-GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-H--EHEP---VNNL 403 (521)
Q Consensus 331 d~riv~~GAGsA-g~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~--~~~~---~~~L 403 (521)
..||.|+|||+. +.++|..|+.. ..++. ...++|+|.+- ++.+.+......+. . .... ..++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~---~~~l~----~~eV~L~Di~~----e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDH---LEEFP----IRKLKLYDNDK----ERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHT---TTTSC----EEEEEEECSCH----HHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhC---CCCCC----CCEEEEEeCCH----HHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 469999999996 55566665441 01431 35799999853 22111111111221 1 1111 2589
Q ss_pred HHHhcccCCcEEEEccCCCCC----------------------------------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 404 LDAVKVIKPTILIGSSGVGRT----------------------------------FTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~----------------------------------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.+++++ +|++|=+.+.++. .=+++++.|.++|+..+|+-.|||.
T Consensus 97 ~eal~~--AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPv 174 (472)
T 1u8x_X 97 EEAFTD--VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPA 174 (472)
T ss_dssp HHHHSS--CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCH
T ss_pred HHHHcC--CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcH
Confidence 999998 9999866554321 1358899999999999999999997
Q ss_pred CCCCCCHHHHhcccCCcEEEecC
Q 009982 450 SQSECTAEEAYTWSKGRAIFASG 472 (521)
Q Consensus 450 ~~~Ectpe~A~~wt~G~aifAsG 472 (521)
-+..+-+++.+.-.-+|.+|
T Consensus 175 ---di~T~~~~k~~p~~rViG~c 194 (472)
T 1u8x_X 175 ---AIVAEATRRLRPNSKILNIC 194 (472)
T ss_dssp ---HHHHHHHHHHSTTCCEEECC
T ss_pred ---HHHHHHHHHhCCCCCEEEeC
Confidence 24445555655443577665
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.91 E-value=0.23 Score=47.27 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=61.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
.++...||.|+|+|..|..+|..+... |. +.++++|+.. +.+....+.+ ......++.|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l~~~-----g~------~~v~~~~~~~-------~~~~~~~~~~--g~~~~~~~~~~ 65 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKALYRK-----GF------RIVQVYSRTE-------ESARELAQKV--EAEYTTDLAEV 65 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHHHHH-----TC------CEEEEECSSH-------HHHHHHHHHT--TCEEESCGGGS
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHHHHC-----CC------eEEEEEeCCH-------HHHHHHHHHc--CCceeCCHHHH
Confidence 345567999999999999999988653 53 2377887631 1111111111 00112467777
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
++. +|++|=+.. ... .+++++.+.+.. +..+|.-+||-.
T Consensus 66 ~~~--~Dvvi~av~-~~~-~~~v~~~l~~~~~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 66 NPY--AKLYIVSLK-DSA-FAELLQGIVEGKREEALMVHTAGSI 105 (266)
T ss_dssp CSC--CSEEEECCC-HHH-HHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred hcC--CCEEEEecC-HHH-HHHHHHHHHhhcCCCcEEEECCCCC
Confidence 764 888884433 333 388888887544 567888888754
No 100
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.81 E-value=0.25 Score=50.62 Aligned_cols=96 Identities=18% Similarity=0.289 Sum_probs=62.8
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc----cCCCCCH
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE----HEPVNNL 403 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~----~~~~~~L 403 (521)
.+...+++|+|+|..|..+|+.+... |. +++.+|+.. .+ +...++.+... .....++
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~-----Ga-------~V~~~d~~~----~~---l~~~~~~~g~~~~~~~~~~~~l 225 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGM-----GA-------TVTVLDINI----DK---LRQLDAEFCGRIHTRYSSAYEL 225 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCH----HH---HHHHHHHTTTSSEEEECCHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCeeEeccCCHHHH
Confidence 47789999999999999999888642 53 588888741 11 11111111110 0112357
Q ss_pred HHHhcccCCcEEEEccCCC-----CCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 404 LDAVKVIKPTILIGSSGVG-----RTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~-----g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.+.++. .|++|.+...+ ..++++.++.|. +.-+|.-+|-
T Consensus 226 ~~~l~~--aDvVi~~~~~p~~~t~~li~~~~l~~mk---~g~~iV~va~ 269 (377)
T 2vhw_A 226 EGAVKR--ADLVIGAVLVPGAKAPKLVSNSLVAHMK---PGAVLVDIAI 269 (377)
T ss_dssp HHHHHH--CSEEEECCCCTTSCCCCCBCHHHHTTSC---TTCEEEEGGG
T ss_pred HHHHcC--CCEEEECCCcCCCCCcceecHHHHhcCC---CCcEEEEEec
Confidence 788876 99999876544 357899999885 4556766763
No 101
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=90.80 E-value=0.21 Score=52.35 Aligned_cols=124 Identities=12% Similarity=0.165 Sum_probs=77.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHH-hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc---CCCCCHHHHh
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISK-QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH---EPVNNLLDAV 407 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~-~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~---~~~~~L~eav 407 (521)
.||.|+|||+. .+..++..+.. ..++. ...++|+|.+- +|.+.........++.. ....++.+++
T Consensus 3 ~KI~IIGaG~v---~~~~l~~~l~~~~~~l~----~~el~L~Di~~----~~~~~~~~~~~~~~~~~~~v~~t~d~~~al 71 (417)
T 1up7_A 3 MRIAVIGGGSS---YTPELVKGLLDISEDVR----IDEVIFYDIDE----EKQKIVVDFVKRLVKDRFKVLISDTFEGAV 71 (417)
T ss_dssp CEEEEETTTCT---THHHHHHHHHHHTTTSC----CCEEEEECSCH----HHHHHHHHHHHHHHTTSSEEEECSSHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHhcccCCC----cCEEEEEeCCH----HHHHHHHHHHHHHhhCCeEEEEeCCHHHHh
Confidence 58999999994 55555444443 23442 36799999753 22110111111111110 1125788999
Q ss_pred cccCCcEEEEccCCCC---------------CC-------------------CHHHHHHHHcCCCCcEEEEcCCCCCCCC
Q 009982 408 KVIKPTILIGSSGVGR---------------TF-------------------TKEVIEAMASFNEKPLILALSNPTSQSE 453 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g---------------~F-------------------t~evv~~Ma~~~erPIIFaLSNPt~~~E 453 (521)
++ +|++|=..++++ ++ =.++++.|.++| ..+|+-.|||. -
T Consensus 72 ~~--AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPv---d 145 (417)
T 1up7_A 72 VD--AKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPS---G 145 (417)
T ss_dssp TT--CSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSH---H
T ss_pred CC--CCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChH---H
Confidence 98 999997776653 22 358999999999 99999999997 2
Q ss_pred CCHHHHhcccCCcEEEecC
Q 009982 454 CTAEEAYTWSKGRAIFASG 472 (521)
Q Consensus 454 ctpe~A~~wt~G~aifAsG 472 (521)
+..+-+++.+.-.-+|.+|
T Consensus 146 i~t~a~~k~~p~~rviG~c 164 (417)
T 1up7_A 146 HITEFVRNYLEYEKFIGLC 164 (417)
T ss_dssp HHHHHHHHTTCCSSEEECC
T ss_pred HHHHHHHHhCCCCCEEEeC
Confidence 4445555666433577765
No 102
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.77 E-value=0.13 Score=51.50 Aligned_cols=126 Identities=19% Similarity=0.311 Sum_probs=73.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|||+.|..++-+|+.. ++ ...++|+|.+-=-.++...+|.+. .+|.++..-..+-.+++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~~a~~~-- 67 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL-----GV-----AREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSYGDLEG-- 67 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCGGGGTT--
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCHHHhCC--
Confidence 3899999999999988876542 43 258999998520000000012111 1222111000123677887
Q ss_pred CcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEEecCC
Q 009982 412 PTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIFASGS 473 (521)
Q Consensus 412 ptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aifAsGS 473 (521)
+|++|=+.+.+ |- .-+++++.|.+++.+.+|+-.|||. -.+.+-+++.+ .-.-+|.+|.
T Consensus 68 aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~s~~p~~rviG~gt 142 (310)
T 2xxj_A 68 ARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPV---DVMTQVAYALSGLPPGRVVGSGT 142 (310)
T ss_dssp EEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHTCCGGGEEECTT
T ss_pred CCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHHcCCCHHHEEecCc
Confidence 89998554443 32 2256777888889999999999996 23344444432 1124667764
No 103
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=90.76 E-value=0.61 Score=47.54 Aligned_cols=101 Identities=19% Similarity=0.292 Sum_probs=62.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCC--------ccCCchhchhhccc--
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSR--------KDSLQHFKKPWAHE-- 396 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R--------~~~l~~~k~~fa~~-- 396 (521)
.+|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=+ ..+. .+++-..|..-+.+
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La~a-----Gv------g~i~lvD~D~V-e~sNL~Rq~l~~~~diG~~Ka~~~~~~l 181 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILATS-----GI------GEIILIDNDQI-ENTNLTRQVLFSEDDVGKNKTEVIKREL 181 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEEECCBC-CGGGGGTCTTCCGGGTTSBHHHHHHHHH
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEECCCcC-cccccccccCCChHHCCChHHHHHHHHH
Confidence 457789999999999999999999886 65 78999998632 1110 00111112111110
Q ss_pred ---c---------CCC--CC-HHHHhcccCCcEEEEccCCCCCC-CHHHHHHHHcCCCCcEEEE
Q 009982 397 ---H---------EPV--NN-LLDAVKVIKPTILIGSSGVGRTF-TKEVIEAMASFNEKPLILA 444 (521)
Q Consensus 397 ---~---------~~~--~~-L~eav~~vkptvLIG~S~~~g~F-t~evv~~Ma~~~erPIIFa 444 (521)
. ... .+ +.+ ++. .|++|-++. ..- +...|...+.....|.|.+
T Consensus 182 ~~~np~v~v~~~~~~i~~~~~~~~-~~~--~DlVvd~~D--n~~~~r~~ln~~c~~~~~p~i~~ 240 (353)
T 3h5n_A 182 LKRNSEISVSEIALNINDYTDLHK-VPE--ADIWVVSAD--HPFNLINWVNKYCVRANQPYINA 240 (353)
T ss_dssp HHHCTTSEEEEEECCCCSGGGGGG-SCC--CSEEEECCC--CSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHCCCCeEEEeecccCchhhhhH-hcc--CCEEEEecC--ChHHHHHHHHHHHHHhCCCEEEE
Confidence 0 111 11 445 554 888887653 223 6777777777778898875
No 104
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=90.74 E-value=1.6 Score=44.58 Aligned_cols=122 Identities=16% Similarity=0.166 Sum_probs=83.0
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDI---QGTASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~---------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
..|+|.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 116 ~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~ 195 (345)
T 4g2n_A 116 LGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRIGRAIATRARGF 195 (345)
T ss_dssp TTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTT
T ss_pred CCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChhHHHHHHHHHHC
Confidence 4566666432 23455677888877763 25678999999999999999999998642
Q ss_pred HHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHH
Q 009982 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEV 429 (521)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~ev 429 (521)
|+ +++.+|+... +.. .+.......+|.|+++. .|+++=.-- .-+.|+++.
T Consensus 196 -----G~-------~V~~~dr~~~---------~~~---~~~g~~~~~~l~ell~~--sDvV~l~~Plt~~T~~li~~~~ 249 (345)
T 4g2n_A 196 -----GL-------AIHYHNRTRL---------SHA---LEEGAIYHDTLDSLLGA--SDIFLIAAPGRPELKGFLDHDR 249 (345)
T ss_dssp -----TC-------EEEEECSSCC---------CHH---HHTTCEECSSHHHHHHT--CSEEEECSCCCGGGTTCBCHHH
T ss_pred -----CC-------EEEEECCCCc---------chh---hhcCCeEeCCHHHHHhh--CCEEEEecCCCHHHHHHhCHHH
Confidence 54 6888887531 000 00111113589999987 899884432 236899999
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 009982 430 IEAMASFNEKPLILALSNP 448 (521)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (521)
++.|. +..|+.=.|+-
T Consensus 250 l~~mk---~gailIN~aRG 265 (345)
T 4g2n_A 250 IAKIP---EGAVVINISRG 265 (345)
T ss_dssp HHHSC---TTEEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 99996 67788878763
No 105
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=90.61 E-value=1.3 Score=44.84 Aligned_cols=91 Identities=15% Similarity=0.248 Sum_probs=63.9
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.+|.|+|+|..|..+|+.+... |+ +++.+|+.. .. .. .+ ....+|.|
T Consensus 159 ~~~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~dr~~----~~---~~----g~----~~~~~l~e 211 (333)
T 3ba1_A 159 TTKFSGKRVGIIGLGRIGLAVAERAEAF-----DC-------PISYFSRSK----KP---NT----NY----TYYGSVVE 211 (333)
T ss_dssp CCCCTTCCEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSC----CT---TC----CS----EEESCHHH
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEECCCc----hh---cc----Cc----eecCCHHH
Confidence 4678999999999999999999988542 53 588888742 11 11 01 11247899
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
+++. .|+++=.-- ..++++++.++.|. +..+|.-.|.-
T Consensus 212 ll~~--aDvVil~vP~~~~t~~li~~~~l~~mk---~gailIn~srG 253 (333)
T 3ba1_A 212 LASN--SDILVVACPLTPETTHIINREVIDALG---PKGVLINIGRG 253 (333)
T ss_dssp HHHT--CSEEEECSCCCGGGTTCBCHHHHHHHC---TTCEEEECSCG
T ss_pred HHhc--CCEEEEecCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 898875421 23688889999885 56788777764
No 106
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.59 E-value=0.21 Score=49.80 Aligned_cols=125 Identities=18% Similarity=0.239 Sum_probs=71.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~~ 409 (521)
.||.|+|||..|.++|-.++.. |+ . + ++++|.+-=-.++...++.+...+..... ....++ +++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~-----g~----~-~-v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK-----EL----G-D-IVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC----S-E-EEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC----C-e-EEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCC
Confidence 4899999999999999987552 53 1 3 99999752000000001211111111110 011456 77887
Q ss_pred cCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 009982 410 IKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (521)
Q Consensus 410 vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (521)
+|++|=+.+.+.. .-+++.+.+.+++++-+|+--|||.. ...+-+++.+. -.-+|++|.
T Consensus 71 --aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~---~~t~~~~~~~~~~~~rviG~gt 145 (309)
T 1ur5_A 71 --SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLD---AMTYLAAEVSGFPKERVIGQAG 145 (309)
T ss_dssp --CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHH---HHHHHHHHHHCCCGGGEEECCH
T ss_pred --CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchH---HHHHHHHHHcCCCHHHEEECCc
Confidence 8999866544421 22478888888898888888899972 23344444321 124677763
No 107
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.59 E-value=1.1 Score=43.53 Aligned_cols=81 Identities=21% Similarity=0.208 Sum_probs=56.4
Q ss_pred eecCCCccHHHHHHHHcC------CCceeccCCCchHHHHHHHHHHHHHHh-CCCcccceEEEeC-cchHHHHHHHHHHH
Q 009982 281 FEDFANHNAFELLAKYGT------THLVFNDDIQGTASVVLAGVVAALKLI-GGTLAEHRFLFLG-AGEAGTGIAELIAL 352 (521)
Q Consensus 281 ~EDf~~~~af~iL~ryr~------~~~~FnDDiQGTaaV~LAgll~Alk~~-g~~L~d~riv~~G-AGsAg~Gia~ll~~ 352 (521)
++-+.-..+.+++++-+. +..+| .|..|.- .--.|++.+++-. +.++++.+++|.| +|.+|.+++..+++
T Consensus 64 ~~G~~~~~~~~~~~~~~~~~~gavnt~~~-~~~~G~n-Td~~g~~~~l~~~~~~~l~gk~vlVtGaaGGiG~aia~~L~~ 141 (287)
T 1lu9_A 64 VGGGDMAAGERVFEAVKKRFFGPFRVSCM-LDSNGSN-TTAAAGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAG 141 (287)
T ss_dssp EECSCHHHHHHHHHHHHHHCBTTBCCEEE-ECSTTHH-HHHHHHHHHHHHHTTSCCTTCEEEEETCSSHHHHHHHHHHHH
T ss_pred EccchHHHHHHHHHHHHHhcCCCeEEEEe-cCCCcCC-chHHHHHHHHHHhhccCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 454445577777777652 23344 4455542 3456777888776 7889999999999 89999999988875
Q ss_pred HHHHhcCCChhhhcCcEEEEecC
Q 009982 353 EISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 353 ~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
. |. +++++|++
T Consensus 142 ~-----G~-------~V~i~~R~ 152 (287)
T 1lu9_A 142 E-----GA-------EVVLCGRK 152 (287)
T ss_dssp T-----TC-------EEEEEESS
T ss_pred C-----cC-------EEEEEECC
Confidence 3 53 38888874
No 108
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=90.39 E-value=0.24 Score=42.87 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.|+|+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~-----G~-------~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 499999999999999998764 75 47788864
No 109
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.22 E-value=0.3 Score=48.48 Aligned_cols=100 Identities=21% Similarity=0.324 Sum_probs=61.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccC----Cchhchhhccc--cCCCCCHHHH
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS----LQHFKKPWAHE--HEPVNNLLDA 406 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~----l~~~k~~fa~~--~~~~~~L~ea 406 (521)
||.|+|||..|.++|..++.. ++ -..++++|.+- ++-+. +.+....+... -....++.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~-----~~-----g~~V~l~D~~~----~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~- 66 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK-----QL-----ARELVLLDVVE----GIPQGKALDMYESGPVGLFDTKVTGSNDYAD- 66 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSS----SHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCh----hHHHHHHHhHHhhhhcccCCcEEEECCCHHH-
Confidence 799999999999999887652 22 25799999852 11111 11110001001 001145655
Q ss_pred hcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
++. +|++|=+.+.+ |- +-+++.+.|+++++..+|+-.|||.
T Consensus 67 l~~--aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 TAN--SDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPL 121 (310)
T ss_dssp GTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSH
T ss_pred HCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCch
Confidence 766 89887554332 21 1157778888888888988899996
No 110
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.12 E-value=0.23 Score=48.62 Aligned_cols=105 Identities=14% Similarity=0.283 Sum_probs=61.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcccc--CCCCCHHHHh
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAHEH--EPVNNLLDAV 407 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~~~--~~~~~L~eav 407 (521)
..||.|+|||+.|..+|..|... |. ..+++++|+.---.+. ..+. .+..++..+. ....+ .+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-----g~-----~~~V~l~d~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~-~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-----GI-----AREIVLEDIAKERVEA--EVLDMQHGSSFYPTVSIDGSDD-PEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSSHHHHHH--HHHHHHHTGGGSTTCEEEEESC-GGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCChhHHHH--HHHHHHhhhhhcCCeEEEeCCC-HHHh
Confidence 35899999999999999888653 53 1479999986310000 0010 0111121110 00013 3556
Q ss_pred cccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
+. +|++|=+...+.. +-+++++.|+++++..+|+.++||..
T Consensus 74 ~~--aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~ 128 (319)
T 1lld_A 74 RD--ADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD 128 (319)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHH
T ss_pred CC--CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchH
Confidence 65 8988855443321 11178888988788889999999973
No 111
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=90.01 E-value=0.12 Score=51.87 Aligned_cols=104 Identities=21% Similarity=0.290 Sum_probs=65.6
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh-ccccCCCCCHHHHhcc
Q 009982 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW-AHEHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f-a~~~~~~~~L~eav~~ 409 (521)
.||+|.| +|..|..++..|++ .|+ ...++++|.+-- .+...+|.+...+. .+......++.+++++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~-----~g~-----~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~~~al~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKM-----NPL-----VSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQLEAALTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHH-----CTT-----EEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHh-----CCC-----CCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCHHHHcCC
Confidence 5899999 79999999888753 253 246999996421 00000011100000 0000011367889988
Q ss_pred cCCcEEEEccCCCC--------------CCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 410 IKPTILIGSSGVGR--------------TFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 410 vkptvLIG~S~~~g--------------~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.|++|=+.+.+. ..++++++.|.+++.+.+|+--|||.
T Consensus 77 --aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv 128 (326)
T 1smk_A 77 --MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPV 128 (326)
T ss_dssp --CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred --CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCch
Confidence 899986655442 24678888898889899999999997
No 112
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=90.00 E-value=1.6 Score=43.49 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=73.5
Q ss_pred hHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEE
Q 009982 310 TASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL 371 (521)
Q Consensus 310 TaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~l 371 (521)
+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |+ +++.
T Consensus 103 vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-----G~-------~V~~ 170 (307)
T 1wwk_A 103 VAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIANAL-----GM-------NILL 170 (307)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEE
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHHHHC-----CC-------EEEE
Confidence 344467777776652 34678999999999999999999988642 54 5888
Q ss_pred EecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 372 VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 372 vDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+|+.. .. + ..+ .+ .-...+|.|+++. .|+++=.-- ..++++++.++.|. +..++.=.|.
T Consensus 171 ~d~~~----~~-~---~~~-~~---g~~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~~mk---~ga~lin~ar 233 (307)
T 1wwk_A 171 YDPYP----NE-E---RAK-EV---NGKFVDLETLLKE--SDVVTIHVPLVESTYHLINEERLKLMK---KTAILINTSR 233 (307)
T ss_dssp ECSSC----CH-H---HHH-HT---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHHHSC---TTCEEEECSC
T ss_pred ECCCC----Ch-h---hHh-hc---CccccCHHHHHhh--CCEEEEecCCChHHhhhcCHHHHhcCC---CCeEEEECCC
Confidence 88742 10 0 000 11 0011378999986 898885421 23678899999886 5678887777
No 113
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=89.96 E-value=2.3 Score=42.79 Aligned_cols=119 Identities=11% Similarity=0.122 Sum_probs=81.4
Q ss_pred CCCceeccCCCch---HHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (521)
Q Consensus 298 ~~~~~FnDDiQGT---aaV~LAgll~Alk~-------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~ 355 (521)
..|+|.|---..+ |=-+++.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 91 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (331)
T 1xdw_A 91 LGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGM-- 168 (331)
T ss_dssp TTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777543333 44478888877761 23568899999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHH
Q 009982 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIE 431 (521)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~ 431 (521)
|+ +++.+|+.. . ..+ + .++. ..+|.|+++. .|+++=.- ...++++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~~~---~-~~~~----~~~l~ell~~--aDvV~~~~p~t~~t~~li~~~~l~ 222 (331)
T 1xdw_A 169 ---GA-------TVIGEDVFE----I--KGI---E-DYCT----QVSLDEVLEK--SDIITIHAPYIKENGAVVTRDFLK 222 (331)
T ss_dssp ---TC-------EEEEECSSC----C--CSC---T-TTCE----ECCHHHHHHH--CSEEEECCCCCTTTCCSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----c--HHH---H-hccc----cCCHHHHHhh--CCEEEEecCCchHHHHHhCHHHHh
Confidence 54 588888742 1 111 1 1111 2379999987 89988642 224689999999
Q ss_pred HHHcCCCCcEEEEcCC
Q 009982 432 AMASFNEKPLILALSN 447 (521)
Q Consensus 432 ~Ma~~~erPIIFaLSN 447 (521)
.|. +..++.=.|.
T Consensus 223 ~mk---~ga~lin~sr 235 (331)
T 1xdw_A 223 KMK---DGAILVNCAR 235 (331)
T ss_dssp TSC---TTEEEEECSC
T ss_pred hCC---CCcEEEECCC
Confidence 885 5678888885
No 114
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.95 E-value=0.12 Score=52.15 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-.||.|+|+|..|.+||..++.. |. +++++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-----G~-------~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-----CC-------EEEEEeCC
Confidence 36899999999999999998764 64 58888874
No 115
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.86 E-value=0.21 Score=50.35 Aligned_cols=124 Identities=19% Similarity=0.267 Sum_probs=73.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhccc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~v 410 (521)
||.|+|||..|.++|..|+.. |+ .+.+.++|..-=..++-..+|.+. ..+....... .+..+++++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-----~~-----~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~~v~~~~~~~a~~~- 69 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-----DV-----AKEVVMVDIKDGMPQGKALDMRES-SPIHGFDTRVTGTNDYGPTED- 69 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----TC-----SSEEEEECSSTTHHHHHHHHHHHH-HHHHTCCCEEEEESSSGGGTT-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----CC-----CCEEEEEeCchHHHHHHHHHHhcc-ccccCCCcEEEECCCHHHhCC-
Confidence 799999999999999988764 54 257999998531111100012211 1121111111 245678887
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecC
Q 009982 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASG 472 (521)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsG 472 (521)
+|++|=+.+.+ |- +-+++++.+.++++..+|+-.|||. .....-+++.++ -+-+|++|
T Consensus 70 -aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 70 -SDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPL---DVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -CSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSH---HHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCch---hHHHHHHHHhcCCChHHEEeec
Confidence 99887444433 21 2256778888999999999999996 333444544431 13456665
No 116
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=89.82 E-value=0.94 Score=44.94 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
++.+++..+. +....+|.|+|+|..|..+++.+... .|. ++++++|+. .++ .....+.+..
T Consensus 122 ~~~la~~~la--~~~~~~igiIG~G~~g~~~a~~l~~~----~g~------~~V~v~dr~----~~~---~~~l~~~~~~ 182 (312)
T 2i99_A 122 VSAIATKFLK--PPSSEVLCILGAGVQAYSHYEIFTEQ----FSF------KEVRIWNRT----KEN---AEKFADTVQG 182 (312)
T ss_dssp HHHHHHHHHS--CTTCCEEEEECCSHHHHHHHHHHHHH----CCC------SEEEEECSS----HHH---HHHHHHHSSS
T ss_pred HHHHHHHHhC--CCCCcEEEEECCcHHHHHHHHHHHHh----CCC------cEEEEEcCC----HHH---HHHHHHHhhC
Confidence 3445553332 44667999999999999999888653 243 578888863 111 1111111110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCC-CCCCCHHHHHHHHcCCCCcEEEEcCC--CCCCCCCCH
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGV-GRTFTKEVIEAMASFNEKPLILALSN--PTSQSECTA 456 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~-~g~Ft~evv~~Ma~~~erPIIFaLSN--Pt~~~Ectp 456 (521)
......++.|+++. +|++|=+... ..+|.++ ...+..+|+.+|+ |. .-|+.+
T Consensus 183 ~~~~~~~~~e~v~~--aDiVi~atp~~~~v~~~~------~l~~g~~vi~~g~~~p~-~~el~~ 237 (312)
T 2i99_A 183 EVRVCSSVQEAVAG--ADVIITVTLATEPILFGE------WVKPGAHINAVGASRPD-WRELDD 237 (312)
T ss_dssp CCEECSSHHHHHTT--CSEEEECCCCSSCCBCGG------GSCTTCEEEECCCCSTT-CCSBCH
T ss_pred CeEEeCCHHHHHhc--CCEEEEEeCCCCcccCHH------HcCCCcEEEeCCCCCCC-ceeccH
Confidence 01124689999987 8998855432 1234332 1235668888853 54 356654
No 117
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.77 E-value=0.27 Score=49.85 Aligned_cols=126 Identities=15% Similarity=0.285 Sum_probs=74.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC---CCHHH
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV---NNLLD 405 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~---~~L~e 405 (521)
++..||.|+|||..|.++|..|+.. |+ + .+.++|.+-=..++-..+|.+. ..|......+ .+. +
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~-----~~----~--~v~L~Di~~~~~~g~~~dl~~~-~~~~~~~~~v~~t~d~-~ 71 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK-----EL----G--DVVLFDIAEGTPQGKGLDIAES-SPVDGFDAKFTGANDY-A 71 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHHH-HHHHTCCCCEEEESSG-G
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC-----CC----C--eEEEEeCCchhHHHHHHHHhch-hhhcCCCCEEEEeCCH-H
Confidence 4567999999999999999888753 65 2 5999998531111000012211 1122111111 344 7
Q ss_pred HhcccCCcEEEEccCCC---CC-----C------CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEE
Q 009982 406 AVKVIKPTILIGSSGVG---RT-----F------TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIF 469 (521)
Q Consensus 406 av~~vkptvLIG~S~~~---g~-----F------t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aif 469 (521)
++++ +|++|=+.+.+ |. | -+++++.|.+++..-+|+-.|||. .....-+++.++ -+-+|
T Consensus 72 a~~~--aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPv---d~~t~~~~k~sg~p~~rvi 146 (324)
T 3gvi_A 72 AIEG--ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPL---DAMVWALQKFSGLPAHKVV 146 (324)
T ss_dssp GGTT--CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HHCC--CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCc---HHHHHHHHHhcCCCHHHEE
Confidence 8887 89887554433 32 1 256778888899999999999996 233334444431 13467
Q ss_pred ecC
Q 009982 470 ASG 472 (521)
Q Consensus 470 AsG 472 (521)
++|
T Consensus 147 G~~ 149 (324)
T 3gvi_A 147 GMA 149 (324)
T ss_dssp ECC
T ss_pred eec
Confidence 776
No 118
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=89.71 E-value=3.3 Score=41.24 Aligned_cols=117 Identities=19% Similarity=0.239 Sum_probs=78.3
Q ss_pred CCCceeccCCCchHH---HHHHHHHHHHHHh-----------------CCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 009982 298 TTHLVFNDDIQGTAS---VVLAGVVAALKLI-----------------GGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (521)
Q Consensus 298 ~~~~~FnDDiQGTaa---V~LAgll~Alk~~-----------------g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~ 357 (521)
..+++.|----.+.+ -+++.+|+..|-. ...|.+.++.|+|.|..|..+|+.+...
T Consensus 71 ~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~---- 146 (303)
T 1qp8_A 71 PHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAAL---- 146 (303)
T ss_dssp TTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHT----
T ss_pred cCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCCEEEEEccCHHHHHHHHHHHHC----
Confidence 467777743322333 4788888876531 2368899999999999999999988642
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 009982 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (521)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (521)
|+ +++.+|+..- + . .. ....+|.|+++. .|+++=.- ...+.++++.++.|
T Consensus 147 -G~-------~V~~~dr~~~------~---~---~~----~~~~~l~ell~~--aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 147 -GA-------QVRGFSRTPK------E---G---PW----RFTNSLEEALRE--ARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp -TC-------EEEEECSSCC------C---S---SS----CCBSCSHHHHTT--CSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred -CC-------EEEEECCCcc------c---c---Cc----ccCCCHHHHHhh--CCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 54 5888887532 0 0 01 123478888886 88887542 22357888888777
Q ss_pred HcCCCCcEEEEcCC
Q 009982 434 ASFNEKPLILALSN 447 (521)
Q Consensus 434 a~~~erPIIFaLSN 447 (521)
. +..++.=.|.
T Consensus 201 k---~gailin~sr 211 (303)
T 1qp8_A 201 A---EDAVFVNVGR 211 (303)
T ss_dssp C---TTCEEEECSC
T ss_pred C---CCCEEEECCC
Confidence 5 5678887776
No 119
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.70 E-value=0.27 Score=48.09 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 314 ~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...|++.+++..+.++++.+++|.|||.+|.++|..+++. | +++++|++
T Consensus 111 d~~G~~~~L~~~~~~l~~k~vlV~GaGgiG~aia~~L~~~-----G--------~V~v~~r~ 159 (287)
T 1nvt_A 111 DGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKD-----N--------NIIIANRT 159 (287)
T ss_dssp HHHHHHHHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS-----S--------EEEEECSS
T ss_pred CHHHHHHHHHHhCCCcCCCEEEEECchHHHHHHHHHHHHC-----C--------CEEEEECC
Confidence 6789999999888899999999999997777777666432 2 68888874
No 120
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.61 E-value=0.24 Score=50.09 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=74.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHh
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAV 407 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav 407 (521)
+..||.|+|||..|.++|..|+.. |+ + .+.++|.+-=..++-..+|.+. ..+....... .+-.+++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~-----~~----~--~v~l~Di~~~~~~g~a~dL~~~-~~~~~~~~~v~~t~d~~a~ 71 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIK-----QL----G--DVVLFDIAQGMPNGKALDLLQT-CPIEGVDFKVRGTNDYKDL 71 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-----TC----C--EEEEECSSSSHHHHHHHHHHTT-HHHHTCCCCEEEESCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-----CC----c--eEEEEeCChHHHHHHHHHHHhh-hhhcCCCcEEEEcCCHHHH
Confidence 457999999999999999887653 55 2 6999998521110000012211 1111111111 1224788
Q ss_pred cccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEec
Q 009982 408 KVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFAS 471 (521)
Q Consensus 408 ~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAs 471 (521)
++ +|++|=+.+.+ |. .-+++++.+.+++..-+|+-.|||. -...+-+++.++ -+-+|++
T Consensus 72 ~~--aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPv---d~~t~~~~k~sg~p~~rviG~ 146 (321)
T 3p7m_A 72 EN--SDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPL---DIMVNMLQKFSGVPDNKIVGM 146 (321)
T ss_dssp TT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEEEE
T ss_pred CC--CCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCch---HHHHHHHHHhcCCCHHHEEee
Confidence 87 89887555443 31 1257778888999999999999995 333444555442 1457777
Q ss_pred C
Q 009982 472 G 472 (521)
Q Consensus 472 G 472 (521)
|
T Consensus 147 ~ 147 (321)
T 3p7m_A 147 A 147 (321)
T ss_dssp C
T ss_pred c
Confidence 7
No 121
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=89.59 E-value=2.2 Score=43.71 Aligned_cols=175 Identities=15% Similarity=0.071 Sum_probs=102.0
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (521)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~--------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~ 354 (521)
..|.|.|---- .+|=-+++-+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 108 ~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~- 186 (351)
T 3jtm_A 108 AGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF- 186 (351)
T ss_dssp TTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGG-
T ss_pred cCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHC-
Confidence 45666654322 2344577777777652 25679999999999999999999988542
Q ss_pred HHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHH
Q 009982 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (521)
Q Consensus 355 ~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv 430 (521)
|+ +++.+|+... . ....+. . ......+|.|+++. .|+++=.- ..-+.|+++.+
T Consensus 187 ----G~-------~V~~~dr~~~----~---~~~~~~-~--g~~~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 243 (351)
T 3jtm_A 187 ----GC-------NLLYHDRLQM----A---PELEKE-T--GAKFVEDLNEMLPK--CDVIVINMPLTEKTRGMFNKELI 243 (351)
T ss_dssp ----CC-------EEEEECSSCC----C---HHHHHH-H--CCEECSCHHHHGGG--CSEEEECSCCCTTTTTCBSHHHH
T ss_pred ----CC-------EEEEeCCCcc----C---HHHHHh-C--CCeEcCCHHHHHhc--CCEEEECCCCCHHHHHhhcHHHH
Confidence 64 4888887421 0 110100 0 01123589999987 89988432 22368999999
Q ss_pred HHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEecc-ccccceeechhhhHHH
Q 009982 431 EAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVFVP-GQANNAYIFPGFGLGL 503 (521)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~~p-~Q~NN~~iFPGiglG~ 503 (521)
+.|. +..+|.=.|+-..--|-.-.+|++ .|+.--|.--=|++--.. ...| -+..|+.+-|=++-..
T Consensus 244 ~~mk---~gailIN~aRG~~vde~aL~~aL~--~g~i~ga~lDV~~~EP~~--~~~pL~~~~nvilTPHia~~t 310 (351)
T 3jtm_A 244 GKLK---KGVLIVNNARGAIMERQAVVDAVE--SGHIGGYSGDVWDPQPAP--KDHPWRYMPNQAMTPHTSGTT 310 (351)
T ss_dssp HHSC---TTEEEEECSCGGGBCHHHHHHHHH--HTSEEEEEESCCSSSSCC--TTCGGGTSTTBCCCCSCGGGS
T ss_pred hcCC---CCCEEEECcCchhhCHHHHHHHHH--hCCccEEEeCCCCCCCCC--CCChhhcCCCEEECCcCCCCC
Confidence 9996 678888888743222322334443 455433322222111000 0011 2456788888765443
No 122
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.56 E-value=0.38 Score=47.67 Aligned_cols=98 Identities=22% Similarity=0.330 Sum_probs=57.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhcc----ccCCCCCHHH
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH----EHEPVNNLLD 405 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa~----~~~~~~~L~e 405 (521)
+.||.|+|+|+.|..+|..|+++ | .+++++|+..- +.+.+..... .|-. ......++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~-----G-------~~V~~~~r~~~----~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 77 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN-----G-------EEVILWARRKE----IVDLINVSHTSPYVEESKITVRATNDLEE 77 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSHH----HHHHHHHHSCBTTBTTCCCCSEEESCGGG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCCHH----HHHHHHHhCCcccCCCCeeeEEEeCCHHH
Confidence 47999999999999999998764 4 36888887421 1011111000 0000 0011135666
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCC
Q 009982 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQ 451 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~ 451 (521)
++. +|++| ++..+ ...+++++.++. +..+|..++|..+.
T Consensus 78 -~~~--aDvVi-l~vk~-~~~~~v~~~l~~--~~~~vv~~~nGi~~ 116 (335)
T 1z82_A 78 -IKK--EDILV-IAIPV-QYIREHLLRLPV--KPSMVLNLSKGIEI 116 (335)
T ss_dssp -CCT--TEEEE-ECSCG-GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred -hcC--CCEEE-EECCH-HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence 654 78666 33323 567778777654 55678889997654
No 123
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.51 E-value=3.8 Score=43.09 Aligned_cols=122 Identities=14% Similarity=0.195 Sum_probs=84.2
Q ss_pred cCCCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 009982 297 GTTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (521)
Q Consensus 297 r~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~ 355 (521)
+..|+|||---- .+|=-++|.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 101 ~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~vA~~l~~~-- 178 (416)
T 3k5p_A 101 KRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQVGNLAESL-- 178 (416)
T ss_dssp HTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHHHHHHHHT--
T ss_pred hcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHHHHHHHHC--
Confidence 357888886433 3455678888887753 25678999999999999999999987543
Q ss_pred HhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 009982 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (521)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (521)
|+ +++.+|+..- .... -+ ....+|.|+++. .|+++=.-- .-+.|+++.++
T Consensus 179 ---G~-------~V~~yd~~~~--------~~~~---~~---~~~~sl~ell~~--aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 179 ---GM-------TVRYYDTSDK--------LQYG---NV---KPAASLDELLKT--SDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp ---TC-------EEEEECTTCC--------CCBT---TB---EECSSHHHHHHH--CSEEEECCCC-----CCBCHHHHH
T ss_pred ---CC-------EEEEECCcch--------hccc---Cc---EecCCHHHHHhh--CCEEEEeCCCCHHHhhhcCHHHHh
Confidence 64 6888887411 1100 01 123579999987 898874321 23688999998
Q ss_pred HHHcCCCCcEEEEcCCCC
Q 009982 432 AMASFNEKPLILALSNPT 449 (521)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt 449 (521)
.|. +..++.=.|.-.
T Consensus 233 ~mk---~gailIN~aRG~ 247 (416)
T 3k5p_A 233 KMK---KGAFLINNARGS 247 (416)
T ss_dssp HSC---TTEEEEECSCTT
T ss_pred hCC---CCcEEEECCCCh
Confidence 885 677888888744
No 124
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.32 E-value=0.58 Score=46.19 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=59.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC--------ccccCCccCCchhchhhccccCCCCCH
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--------LIVSSRKDSLQHFKKPWAHEHEPVNNL 403 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G--------Li~~~R~~~l~~~k~~fa~~~~~~~~L 403 (521)
.||.|+|+|+-|..+|..|.+. | .++.++|+.- +...++ ....++ + +......++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~~~i~~~Gl~~~~~--~~g~~~--~-~~~~~~~~~ 65 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-----G-------HCVSVVSRSDYETVKAKGIRIRSA--TLGDYT--F-RPAAVVRSA 65 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-----T-------CEEEEECSTTHHHHHHHCEEEEET--TTCCEE--E-CCSCEESCG
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEeCChHHHHHhCCcEEeec--CCCcEE--E-eeeeeECCH
Confidence 4899999999999999988663 4 4688888753 111100 000000 0 000112456
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
.++.+. +|++| ++... ..++++++.++.+- +..+|+.+.|-..
T Consensus 66 ~~~~~~--~DlVi-lavK~-~~~~~~l~~l~~~l~~~t~Iv~~~nGi~ 109 (320)
T 3i83_A 66 AELETK--PDCTL-LCIKV-VEGADRVGLLRDAVAPDTGIVLISNGID 109 (320)
T ss_dssp GGCSSC--CSEEE-ECCCC-CTTCCHHHHHTTSCCTTCEEEEECSSSS
T ss_pred HHcCCC--CCEEE-EecCC-CChHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 665533 88887 55544 45668999987543 4567888999764
No 125
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=89.27 E-value=1.2 Score=44.64 Aligned_cols=112 Identities=20% Similarity=0.181 Sum_probs=68.8
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
++.+++..+.. ....++.|+|+|..|-.+++.+... .++ ++++++|+. .++ .....+.|..
T Consensus 112 ~s~laa~~la~--~~~~~v~iIGaG~~a~~~~~al~~~----~~~------~~V~v~~r~----~~~---a~~la~~~~~ 172 (322)
T 1omo_A 112 AGGIAAKYLAR--KNSSVFGFIGCGTQAYFQLEALRRV----FDI------GEVKAYDVR----EKA---AKKFVSYCED 172 (322)
T ss_dssp HHHHHHHHHSC--TTCCEEEEECCSHHHHHHHHHHHHH----SCC------CEEEEECSS----HHH---HHHHHHHHHH
T ss_pred HHHHHHHhccC--CCCCEEEEEcCcHHHHHHHHHHHHh----CCc------cEEEEECCC----HHH---HHHHHHHHHh
Confidence 34555555432 3567999999999999988877653 232 678888873 222 2222223321
Q ss_pred ---ccCCCCCHHHHhcccCCcEEEEccCCC-CCCCHHHHHHHHcCCCCcEEEEcC--CCCCCCCCCHH
Q 009982 396 ---EHEPVNNLLDAVKVIKPTILIGSSGVG-RTFTKEVIEAMASFNEKPLILALS--NPTSQSECTAE 457 (521)
Q Consensus 396 ---~~~~~~~L~eav~~vkptvLIG~S~~~-g~Ft~evv~~Ma~~~erPIIFaLS--NPt~~~Ectpe 457 (521)
... ..++.|++ . .|++|=++..+ ..|+.+++ .+.-.|+.++ +|. +-|+.++
T Consensus 173 ~~~~~~-~~~~~e~v-~--aDvVi~aTp~~~pv~~~~~l------~~G~~V~~ig~~~p~-~~el~~~ 229 (322)
T 1omo_A 173 RGISAS-VQPAEEAS-R--CDVLVTTTPSRKPVVKAEWV------EEGTHINAIGADGPG-KQELDVE 229 (322)
T ss_dssp TTCCEE-ECCHHHHT-S--SSEEEECCCCSSCCBCGGGC------CTTCEEEECSCCSTT-CCCBCHH
T ss_pred cCceEE-ECCHHHHh-C--CCEEEEeeCCCCceecHHHc------CCCeEEEECCCCCCC-ccccCHH
Confidence 112 46899999 5 99998776533 23443332 2556899883 465 6788764
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.26 E-value=0.41 Score=44.78 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=57.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~l-vDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
.||.|+|+|..|..+|..+.+. |. ++.+ +|++ . +.+....+.+- .....+..++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~-----g~-------~V~~v~~r~----~---~~~~~l~~~~g--~~~~~~~~~~~~~- 81 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAA-----QI-------PAIIANSRG----P---ASLSSVTDRFG--ASVKAVELKDALQ- 81 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHT-----TC-------CEEEECTTC----G---GGGHHHHHHHT--TTEEECCHHHHTT-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------EEEEEECCC----H---HHHHHHHHHhC--CCcccChHHHHhc-
Confidence 5899999999999999988763 53 3554 5552 1 11222222221 0112345566765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
+|++| ++..+ ...+++++.++. .+..+|+-++||..
T Consensus 82 -aDvVi-lavp~-~~~~~v~~~l~~-~~~~ivi~~~~g~~ 117 (220)
T 4huj_A 82 -ADVVI-LAVPY-DSIADIVTQVSD-WGGQIVVDASNAID 117 (220)
T ss_dssp -SSEEE-EESCG-GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred -CCEEE-EeCCh-HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence 88887 33333 466778877765 45669999999874
No 127
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.26 E-value=0.87 Score=42.35 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=26.3
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+...||.|+|+|..|..+|..+... | .+++++|+.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~-----g-------~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIA-----G-------HEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEcCC
Confidence 346677999999999999999988653 4 368888763
No 128
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.25 E-value=0.4 Score=48.15 Aligned_cols=39 Identities=21% Similarity=0.292 Sum_probs=34.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
++|++.||+|+|+|..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La~a-----GV------G~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLTRC-----GI------GKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHHHc-----CC------CEEEEECCCc
Confidence 579999999999999999999999886 65 7899999863
No 129
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.21 E-value=0.44 Score=48.33 Aligned_cols=32 Identities=28% Similarity=0.336 Sum_probs=26.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
-.||.|+|||..|.|||..++.+ |+ ++.++|.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~-----G~-------~V~l~D~ 37 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG-----GF-------RVKLYDI 37 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECS
T ss_pred CCeEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEEC
Confidence 36899999999999999988764 65 5778885
No 130
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=89.21 E-value=0.24 Score=50.28 Aligned_cols=128 Identities=16% Similarity=0.228 Sum_probs=76.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (521)
..||.|+|||..|..+|..|+.. |+ ...+.++|.+-=..++-.-+|.+. .+|.. ...-..+-.+++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~-----~~-----~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~a~~~ 73 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ-----GI-----TDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYEDCKD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGGGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHHHhCC
Confidence 36899999999999999988764 54 258999997310000000013222 23321 10001223467776
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEEecCC
Q 009982 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIFASGS 473 (521)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aifAsGS 473 (521)
+|++|=+.+.+ |- .-+++++.+++++.+.+|+-.|||. .+..+-+++.+. -+-+|++|.
T Consensus 74 --aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPv---d~~t~~~~k~~g~p~~rviG~gt 148 (326)
T 3pqe_A 74 --ADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPV---DILTYATWKFSGLPKERVIGSGT 148 (326)
T ss_dssp --CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSH---HHHHHHHHHHHCCCGGGEEECTT
T ss_pred --CCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChH---HHHHHHHHHhcCCCHHHEEeecc
Confidence 89887554432 31 1257788888999999999999996 344555555532 145677764
Q ss_pred C
Q 009982 474 P 474 (521)
Q Consensus 474 P 474 (521)
-
T Consensus 149 ~ 149 (326)
T 3pqe_A 149 T 149 (326)
T ss_dssp H
T ss_pred c
Confidence 3
No 131
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=89.17 E-value=2.6 Score=42.11 Aligned_cols=117 Identities=18% Similarity=0.165 Sum_probs=79.6
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~---------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
..|.|.|----. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 87 ~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 166 (311)
T 2cuk_A 87 RGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAVAKRALAF 166 (311)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHHHHHHHHC
Confidence 456666643322 344467777777552 14578899999999999999999988642
Q ss_pred HHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHH
Q 009982 354 ISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEV 429 (521)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~ev 429 (521)
|+ +++.+|+.. .. .. + ...+|.|+++. .|+++=.- ...++++++.
T Consensus 167 -----G~-------~V~~~d~~~----~~---~~------~----~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~ 215 (311)
T 2cuk_A 167 -----GM-------RVVYHARTP----KP---LP------Y----PFLSLEELLKE--ADVVSLHTPLTPETHRLLNRER 215 (311)
T ss_dssp -----TC-------EEEEECSSC----CS---SS------S----CBCCHHHHHHH--CSEEEECCCCCTTTTTCBCHHH
T ss_pred -----CC-------EEEEECCCC----cc---cc------c----ccCCHHHHHhh--CCEEEEeCCCChHHHhhcCHHH
Confidence 53 588888742 11 11 1 13579999987 89988652 2236788888
Q ss_pred HHHHHcCCCCcEEEEcCCC
Q 009982 430 IEAMASFNEKPLILALSNP 448 (521)
Q Consensus 430 v~~Ma~~~erPIIFaLSNP 448 (521)
++.|. +..++.=.|.-
T Consensus 216 l~~mk---~ga~lin~srg 231 (311)
T 2cuk_A 216 LFAMK---RGAILLNTARG 231 (311)
T ss_dssp HTTSC---TTCEEEECSCG
T ss_pred HhhCC---CCcEEEECCCC
Confidence 88774 67788888873
No 132
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=88.92 E-value=0.34 Score=48.85 Aligned_cols=127 Identities=14% Similarity=0.248 Sum_probs=76.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC--ccccCCccCCchhchhhccccCCC--CCHH
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG--LIVSSRKDSLQHFKKPWAHEHEPV--NNLL 404 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G--Li~~~R~~~l~~~k~~fa~~~~~~--~~L~ 404 (521)
.+..||.|+|||..|.++|..++.. |+ ..+.++|.+- -..++...++.+ ..++......+ .+-.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~-----g~------~~v~l~D~~~~~~~~~g~a~dl~~-~~~~~~~~~~i~~t~d~ 73 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQK-----EL------ADVVLVDIPQLENPTKGKALDMLE-ASPVQGFDANIIGTSDY 73 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCGGGHHHHHHHHHHHHH-HHHHHTCCCCEEEESCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEeccchHHHHHHhhhhHHH-hhhhccCCCEEEEcCCH
Confidence 3457999999999999999988753 54 3789999861 111111111222 12333211111 1224
Q ss_pred HHhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEE
Q 009982 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAI 468 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~ai 468 (521)
+++++ .|++|=+.+.+ |- .-+++++.+++++..-+|+-.|||. .....-+++.++ -+-+
T Consensus 74 ~a~~~--aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPv---d~~t~~~~k~sg~p~~rv 148 (315)
T 3tl2_A 74 ADTAD--SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPV---DAMTYSVFKEAGFPKERV 148 (315)
T ss_dssp GGGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGE
T ss_pred HHhCC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChH---HHHHHHHHHhcCCChHHE
Confidence 67777 99887554433 21 2357888888999999999999995 334444444431 1346
Q ss_pred EecC
Q 009982 469 FASG 472 (521)
Q Consensus 469 fAsG 472 (521)
|++|
T Consensus 149 iG~g 152 (315)
T 3tl2_A 149 IGQS 152 (315)
T ss_dssp EECC
T ss_pred Eeec
Confidence 6665
No 133
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=88.79 E-value=0.29 Score=48.92 Aligned_cols=119 Identities=15% Similarity=0.328 Sum_probs=71.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCcc----CCchhchhhccccCCC---CCHHH
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKD----SLQHFKKPWAHEHEPV---NNLLD 405 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~----~l~~~k~~fa~~~~~~---~~L~e 405 (521)
||.|+|||..|.++|-.++.. |+ ..++|+|.+ .++.+ ++.+. ..+....... .+. +
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~-----~l------~el~L~Di~----~~~~~g~~~dl~~~-~~~~~~~~~i~~t~d~-~ 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR-----GY------DDLLLIART----PGKPQGEALDLAHA-AAELGVDIRISGSNSY-E 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-----TC------SCEEEECSS----TTHHHHHHHHHHHH-HHHHTCCCCEEEESCG-G
T ss_pred CEEEECcCHHHHHHHHHHHhC-----CC------CEEEEEcCC----hhhHHHHHHHHHHh-hhhcCCCeEEEECCCH-H
Confidence 689999999999999777643 54 369999985 22211 11111 1111101111 355 6
Q ss_pred HhcccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccC--CcEEE
Q 009982 406 AVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSK--GRAIF 469 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~--G~aif 469 (521)
++++ +|++|=+.+.+.. .-+++++.|.++++..+|+-.|||. -...+-+++.+. -.-+|
T Consensus 64 a~~~--aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv---~~~t~~~~k~~~~p~~rvi 138 (308)
T 2d4a_B 64 DMRG--SDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPV---DAMTYVMYKKTGFPRERVI 138 (308)
T ss_dssp GGTT--CSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCch---HHHHHHHHHhcCCChhhEE
Confidence 7887 9999866554431 2457888888889898777789996 233334444321 12467
Q ss_pred ecCC
Q 009982 470 ASGS 473 (521)
Q Consensus 470 AsGS 473 (521)
++|.
T Consensus 139 G~gt 142 (308)
T 2d4a_B 139 GFSG 142 (308)
T ss_dssp ECCH
T ss_pred Eecc
Confidence 7753
No 134
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.68 E-value=1.8 Score=44.30 Aligned_cols=144 Identities=13% Similarity=0.154 Sum_probs=87.6
Q ss_pred eeeecCCCccH-HHHHHHHcCCCceeccCC---CchHHHHHHHHHHHHHH--------------------hCCCcccceE
Q 009982 279 IQFEDFANHNA-FELLAKYGTTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRF 334 (521)
Q Consensus 279 Iq~EDf~~~~a-f~iL~ryr~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~L~d~ri 334 (521)
|+.-..+..|- ...+.+.+..|.|.|--- +.+|=-+++.+|+..|- .+..|.+.+|
T Consensus 88 I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tv 167 (364)
T 2j6i_A 88 VVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTI 167 (364)
T ss_dssp EEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEE
T ss_pred EEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEE
Confidence 55555444442 122223223566666432 23344467887777662 3678999999
Q ss_pred EEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcE
Q 009982 335 LFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTI 414 (521)
Q Consensus 335 v~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptv 414 (521)
.|+|.|..|..+|+.+... |+ ++++.+|+... . .... ..+ ......+|.|+++. .|+
T Consensus 168 gIIG~G~IG~~vA~~l~~~-----G~------~~V~~~d~~~~----~---~~~~-~~~--g~~~~~~l~ell~~--aDv 224 (364)
T 2j6i_A 168 ATIGAGRIGYRVLERLVPF-----NP------KELLYYDYQAL----P---KDAE-EKV--GARRVENIEELVAQ--ADI 224 (364)
T ss_dssp EEECCSHHHHHHHHHHGGG-----CC------SEEEEECSSCC----C---HHHH-HHT--TEEECSSHHHHHHT--CSE
T ss_pred EEECcCHHHHHHHHHHHhC-----CC------cEEEEECCCcc----c---hhHH-Hhc--CcEecCCHHHHHhc--CCE
Confidence 9999999999999988532 53 23888886421 0 1100 011 00112478898886 899
Q ss_pred EEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 415 LIGSSGV----GRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 415 LIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
++=.--. .++++++.++.|. +..+|.-.|+-
T Consensus 225 V~l~~P~t~~t~~li~~~~l~~mk---~ga~lIn~arG 259 (364)
T 2j6i_A 225 VTVNAPLHAGTKGLINKELLSKFK---KGAWLVNTARG 259 (364)
T ss_dssp EEECCCCSTTTTTCBCHHHHTTSC---TTEEEEECSCG
T ss_pred EEECCCCChHHHHHhCHHHHhhCC---CCCEEEECCCC
Confidence 8854321 2688888888885 57788888873
No 135
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.60 E-value=0.84 Score=48.37 Aligned_cols=101 Identities=11% Similarity=0.153 Sum_probs=64.1
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHh
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav 407 (521)
++..+|.|+|+|..|.++|..|++. |. +++++|+. .+ ......+.+.. ......++.|++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~~r~----~~---~~~~l~~~~~~~gi~~~~s~~e~v 73 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR-----GY-------TVSIFNRS----RE---KTEEVIAENPGKKLVPYYTVKEFV 73 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS----HH---HHHHHHHHSTTSCEEECSSHHHHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC-----CC-------eEEEEeCC----HH---HHHHHHhhCCCCCeEEeCCHHHHH
Confidence 5667899999999999999998753 53 57777763 11 11111111100 011235788988
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
+.. ++|++| ++.+.+..++++++.+...- +..||.-+||-.
T Consensus 74 ~~l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 74 ESLETPRRIL-LMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HTBCSSCEEE-ECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred hCCCCCCEEE-EECCCHHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 753 488877 55545567888998887544 456888899865
No 136
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=88.51 E-value=0.28 Score=50.43 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~a-----GV------g~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHc-----CC------CEEEEecCCE
Confidence 57889999999999999999999885 75 7899999863
No 137
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=88.50 E-value=5.6 Score=41.38 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=80.7
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
..|+|||---- .+|=-++|.+|+..|- .|..|.+.++.|+|-|..|..+|+.+...
T Consensus 91 ~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA~~l~~~--- 167 (404)
T 1sc6_A 91 RGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESL--- 167 (404)
T ss_dssp TTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHHHHHHHC---
Confidence 56788886443 3455578888888763 25679999999999999999999988642
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (521)
|+ +++.+|+..- ..+. -+ ....+|.|+++. .|+++=.- ..-+.|+++.++.
T Consensus 168 --G~-------~V~~~d~~~~------~~~~-----~~---~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 222 (404)
T 1sc6_A 168 --GM-------YVYFYDIENK------LPLG-----NA---TQVQHLSDLLNM--SDVVSLHVPENPSTKNMMGAKEISL 222 (404)
T ss_dssp --TC-------EEEEECSSCC------CCCT-----TC---EECSCHHHHHHH--CSEEEECCCSSTTTTTCBCHHHHHH
T ss_pred --CC-------EEEEEcCCch------hccC-----Cc---eecCCHHHHHhc--CCEEEEccCCChHHHHHhhHHHHhh
Confidence 64 5888887421 1010 01 123478888887 88877442 1235788888888
Q ss_pred HHcCCCCcEEEEcCC
Q 009982 433 MASFNEKPLILALSN 447 (521)
Q Consensus 433 Ma~~~erPIIFaLSN 447 (521)
|. +..++.=.|.
T Consensus 223 mk---~ga~lIN~aR 234 (404)
T 1sc6_A 223 MK---PGSLLINASR 234 (404)
T ss_dssp SC---TTEEEEECSC
T ss_pred cC---CCeEEEECCC
Confidence 85 5667777775
No 138
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=88.36 E-value=2.8 Score=42.73 Aligned_cols=104 Identities=13% Similarity=0.196 Sum_probs=62.4
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. . . .+ ....+|.|
T Consensus 166 ~~~l~gktiGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~----~~-~-~-----~~----~~~~sl~e 218 (340)
T 4dgs_A 166 GHSPKGKRIGVLGLGQIGRALASRAEAF-----GM-------SVRYWNRST----LS-G-V-----DW----IAHQSPVD 218 (340)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEECSSC----CT-T-S-----CC----EECSSHHH
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCCc----cc-c-c-----Cc----eecCCHHH
Confidence 4678999999999999999999988542 54 588888642 11 0 1 11 11358999
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009982 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (521)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (521)
+++. .|+++=.-- .-+.++++.++.|. +..++.=.|.-..--|-.-.+|++
T Consensus 219 ll~~--aDvVil~vP~t~~t~~li~~~~l~~mk---~gailIN~aRG~vvde~aL~~aL~ 273 (340)
T 4dgs_A 219 LARD--SDVLAVCVAASAATQNIVDASLLQALG---PEGIVVNVARGNVVDEDALIEALK 273 (340)
T ss_dssp HHHT--CSEEEECC----------CHHHHHHTT---TTCEEEECSCC-------------
T ss_pred HHhc--CCEEEEeCCCCHHHHHHhhHHHHhcCC---CCCEEEECCCCcccCHHHHHHHHH
Confidence 9987 999884421 23678889999886 567888888754333433444443
No 139
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=88.34 E-value=0.55 Score=46.74 Aligned_cols=125 Identities=18% Similarity=0.283 Sum_probs=75.4
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec--CCccccCCccCCchhchhhccccCCC----CCHHH
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSSRKDSLQHFKKPWAHEHEPV----NNLLD 405 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs--~GLi~~~R~~~l~~~k~~fa~~~~~~----~~L~e 405 (521)
||+|.|| |..|..++..|+. .|+ ...++++|. +---.++-..++.+. .++....-.. .++.+
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~-----~~~-----~~el~L~Di~~~~~~~~~~~~dl~~~-~~~~~~~~~i~~~~d~l~~ 70 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAK-----EPF-----MKDLVLIGREHSINKLEGLREDIYDA-LAGTRSDANIYVESDENLR 70 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-----CTT-----CCEEEEEECGGGHHHHHHHHHHHHHH-HTTSCCCCEEEEEETTCGG
T ss_pred EEEEECCCChhHHHHHHHHHh-----CCC-----CCEEEEEcCCCchhhhHHHHHHHHHh-HHhcCCCeEEEeCCcchHH
Confidence 7999999 9999999888754 243 246899996 210000000012221 1222100011 13788
Q ss_pred HhcccCCcEEEEccCCCC---C-----------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhccc--CCcEEE
Q 009982 406 AVKVIKPTILIGSSGVGR---T-----------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWS--KGRAIF 469 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g---~-----------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt--~G~aif 469 (521)
++++ +|++|=+.+.+. . .+++++++|.+++ +.+|+--|||. ....+-+++.+ .-.-+|
T Consensus 71 al~g--aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv---~~~t~~~~k~~~~p~~rvi 144 (313)
T 1hye_A 71 IIDE--SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV---DVMTYKALVDSKFERNQVF 144 (313)
T ss_dssp GGTT--CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH---HHHHHHHHHHHCCCTTSEE
T ss_pred HhCC--CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH---HHHHHHHHHhhCcChhcEE
Confidence 8988 999887766542 1 3668889999999 99999999996 33444455542 123577
Q ss_pred ecCCC
Q 009982 470 ASGSP 474 (521)
Q Consensus 470 AsGSP 474 (521)
++|.-
T Consensus 145 G~gt~ 149 (313)
T 1hye_A 145 GLGTH 149 (313)
T ss_dssp ECTTH
T ss_pred EeCcc
Confidence 77643
No 140
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.31 E-value=0.34 Score=48.86 Aligned_cols=116 Identities=20% Similarity=0.228 Sum_probs=65.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc----ccCCCCCHHHHhc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH----EHEPVNNLLDAVK 408 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~----~~~~~~~L~eav~ 408 (521)
||+|+|||-.|--+|+.|.+ ..++.++|... . .+... ++++. +..+..+|.+.++
T Consensus 18 kilvlGaG~vG~~~~~~L~~-------------~~~v~~~~~~~----~---~~~~~-~~~~~~~~~d~~d~~~l~~~~~ 76 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-------------EFDVYIGDVNN----E---NLEKV-KEFATPLKVDASNFDKLVEVMK 76 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------------TSEEEEEESCH----H---HHHHH-TTTSEEEECCTTCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhc-------------CCCeEEEEcCH----H---HHHHH-hccCCcEEEecCCHHHHHHHHh
Confidence 79999999998888777632 13577777631 1 12111 12221 2233356888888
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcc
Q 009982 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 478 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv 478 (521)
+ .|++|-+. |..+..+++++-.+... . ++-+|--......--++|.+ .|.. +..|.=|+|-
T Consensus 77 ~--~DvVi~~~--p~~~~~~v~~~~~~~g~-~-yvD~s~~~~~~~~l~~~a~~--~g~~-~i~~~G~~PG 137 (365)
T 3abi_A 77 E--FELVIGAL--PGFLGFKSIKAAIKSKV-D-MVDVSFMPENPLELRDEAEK--AQVT-IVFDAGFAPG 137 (365)
T ss_dssp T--CSEEEECC--CGGGHHHHHHHHHHHTC-E-EEECCCCSSCGGGGHHHHHH--TTCE-EECCCBTTTB
T ss_pred C--CCEEEEec--CCcccchHHHHHHhcCc-c-eEeeeccchhhhhhhhhhcc--CCce-eeecCCCCCc
Confidence 6 89998544 55688888888765433 3 55566432222223345544 3433 3233336663
No 141
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=88.29 E-value=0.87 Score=43.03 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=58.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|+|..|..+|..+.+. |.. ..++++++|+. . +.+...++.+ ......++.|+++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-----g~~---~~~~V~~~~r~----~---~~~~~~~~~~--g~~~~~~~~e~~~~-- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-----NIV---SSNQIICSDLN----T---ANLKNASEKY--GLTTTTDNNEVAKN-- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSC----H---HHHHHHHHHH--CCEECSCHHHHHHH--
T ss_pred CeEEEECccHHHHHHHHHHHhC-----CCC---CCCeEEEEeCC----H---HHHHHHHHHh--CCEEeCChHHHHHh--
Confidence 4899999999999999988764 521 12478888873 1 1122221111 11123578888877
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 412 PTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
+|++|= +..+ ...+++++.+..+. +..+|...++-.+
T Consensus 64 aDvVil-av~~-~~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ADILIL-SIKP-DLYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp CSEEEE-CSCT-TTHHHHC---CCSSCTTCEEEECSCCSC
T ss_pred CCEEEE-EeCH-HHHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 888773 3333 45677777776543 4557777776653
No 142
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.29 E-value=0.96 Score=44.64 Aligned_cols=111 Identities=12% Similarity=0.156 Sum_probs=64.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccC-CccCCchhc--hhhccc---cCC---CC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE---HEP---VN 401 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k--~~fa~~---~~~---~~ 401 (521)
..||.|+|+|..|.++|..+.+..... . ....+++++|+..-.... +.+.+.... ..|-.. ... ..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~-~----~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQL-A----QFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVP 82 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHC-T----TEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcc-c----CCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEc
Confidence 358999999999999999998752110 0 001468888875321100 000011000 001000 001 14
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
++.++++. +|++| ++... ...+++++.+..+. +..+|..++|-.+
T Consensus 83 ~~~~~~~~--aD~Vi-lav~~-~~~~~v~~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 83 DVVQAAED--ADILI-FVVPH-QFIGKICDQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp SHHHHHTT--CSEEE-ECCCG-GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred CHHHHHcC--CCEEE-EeCCH-HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence 68888876 89877 44433 57789999887653 4678889999654
No 143
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=88.15 E-value=0.56 Score=48.97 Aligned_cols=97 Identities=18% Similarity=0.281 Sum_probs=52.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChh-hhcCcEEEEecCC-------ccccCCcc--CCchhchhhccccCCCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVE-ETRKKICLVDSKG-------LIVSSRKD--SLQHFKKPWAHEHEPVN 401 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~e-eA~~~i~lvDs~G-------Li~~~R~~--~l~~~k~~fa~~~~~~~ 401 (521)
.||.|+|||+=|+++|..|.+.-.. .+.- +-.=.+|..|..= .|...|.. -|+..+.| ..-....
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~---~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp--~~i~~t~ 109 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKG---YPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLP--DNLVANP 109 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH---CTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCC--SSEEEES
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCC---ccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCC--CCcEEeC
Confidence 3999999999999999999886321 1000 0011467655431 12222211 12222111 0011125
Q ss_pred CHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN 437 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~ 437 (521)
+|.+++++ +|++|= . +|-.|-+++++.+..+-
T Consensus 110 dl~~al~~--ad~ii~-a-vPs~~~r~~l~~l~~~~ 141 (391)
T 4fgw_A 110 DLIDSVKD--VDIIVF-N-IPHQFLPRICSQLKGHV 141 (391)
T ss_dssp CHHHHHTT--CSEEEE-C-SCGGGHHHHHHHHTTTS
T ss_pred CHHHHHhc--CCEEEE-E-CChhhhHHHHHHhcccc
Confidence 78898887 777652 2 23357788888887543
No 144
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.78 E-value=1.6 Score=38.57 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=59.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (521)
.+|+|.|| |-.|..+++.|++. | .++++++++.- +...+......+.. +..+..++.++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 67 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA-----G-------YEVTVLVRDSS----RLPSEGPRPAHVVVGDVLQAADVDKTVAG 67 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEESCGG----GSCSSSCCCSEEEESCTTSHHHHHHHHTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC-----C-------CeEEEEEeChh----hcccccCCceEEEEecCCCHHHHHHHHcC
Confidence 68999998 88888888887652 4 36888887521 10111011111111 22222467788876
Q ss_pred cCCcEEEEccCCCCC---------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGVGRT---------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~~g~---------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+.... .+..++++|.+..-+.|||.=|
T Consensus 68 --~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss 111 (206)
T 1hdo_A 68 --QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (206)
T ss_dssp --CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred --CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence 8999988765431 2567888887766667888544
No 145
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.75 E-value=1.3 Score=43.12 Aligned_cols=100 Identities=12% Similarity=0.119 Sum_probs=58.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec--CCccccC-CccCCch-hchhhccccCCCC--CHHHH
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS--KGLIVSS-RKDSLQH-FKKPWAHEHEPVN--NLLDA 406 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs--~GLi~~~-R~~~l~~-~k~~fa~~~~~~~--~L~ea 406 (521)
||.|+|+|..|..+|..|.+. | .+++++|+ +.--.+. +...... +...+ ....... ++.|+
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 68 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-----G-------NEVRIWGTEFDTEILKSISAGREHPRLGVKL-NGVEIFWPEQLEKC 68 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-----C-------CEEEEECCGGGHHHHHHHHTTCCBTTTTBCC-CSEEEECGGGHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhC-----C-------CeEEEEEccCCHHHHHHHHHhCcCcccCccc-cceEEecHHhHHHH
Confidence 799999999999999988764 4 36888887 3210000 0000000 00000 0000112 67788
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
++. +|++|= +..+ ...+++++.++...+..+|..++|-.
T Consensus 69 ~~~--~D~vi~-~v~~-~~~~~v~~~i~~l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 69 LEN--AEVVLL-GVST-DGVLPVMSRILPYLKDQYIVLISKGL 107 (335)
T ss_dssp HTT--CSEEEE-CSCG-GGHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred Hhc--CCEEEE-cCCh-HHHHHHHHHHhcCCCCCEEEEEcCcC
Confidence 875 888773 3333 36788888886533466888888865
No 146
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.66 E-value=0.39 Score=46.34 Aligned_cols=38 Identities=24% Similarity=0.423 Sum_probs=32.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|++.||+|+|+|..|..+|+.|+.+ |+ ++|.++|.+-
T Consensus 28 ~l~~~~VlVvG~Gg~G~~va~~La~~-----Gv------~~i~lvD~d~ 65 (249)
T 1jw9_B 28 ALKDSRVLIVGLGGLGCAASQYLASA-----GV------GNLTLLDFDT 65 (249)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCCB
T ss_pred HHhCCeEEEEeeCHHHHHHHHHHHHc-----CC------CeEEEEcCCC
Confidence 46678999999999999999999875 65 6899999974
No 147
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=87.62 E-value=3.2 Score=44.61 Aligned_cols=99 Identities=15% Similarity=0.242 Sum_probs=57.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-c--cCCCCC-HH
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-E--HEPVNN-LL 404 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~--~~~~~~-L~ 404 (521)
-+.||||+|||+.|-++|.+|++. .++. ..+|.+.|+.-. +.+ +. .....+.. . ..+... |.
T Consensus 12 ~~~rVlIIGaGgVG~~va~lla~~----~dv~----~~~I~vaD~~~~----~~~-~~~~~g~~~~~~~Vdadnv~~~l~ 78 (480)
T 2ph5_A 12 FKNRFVILGFGCVGQALMPLIFEK----FDIK----PSQVTIIAAEGT----KVD-VAQQYGVSFKLQQITPQNYLEVIG 78 (480)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHH----BCCC----GGGEEEEESSCC----SCC-HHHHHTCEEEECCCCTTTHHHHTG
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC----CCCc----eeEEEEeccchh----hhh-HHhhcCCceeEEeccchhHHHHHH
Confidence 357899999999999999999875 2432 246888887421 111 11 11112221 1 111112 34
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
..|+. +|++|=+| ...++.+++++-.+ ..=-.+-++|
T Consensus 79 aLl~~--~DvVIN~s--~~~~~l~Im~acle--aGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEE--NDFLIDVS--IGISSLALIILCNQ--KGALYINAAT 115 (480)
T ss_dssp GGCCT--TCEEEECC--SSSCHHHHHHHHHH--HTCEEEESSC
T ss_pred HHhcC--CCEEEECC--ccccCHHHHHHHHH--cCCCEEECCC
Confidence 46664 59999655 33577788877653 2334566666
No 148
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=87.61 E-value=3.1 Score=41.93 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=60.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. + .. ..+- . ...+|.++
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~-----G~-------~V~~~d~~~----~~-~---~~-~~~g--~-~~~~l~e~ 197 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPF-----GV-------KLYYWSRHR----KV-N---VE-KELK--A-RYMDIDEL 197 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC----CH-H---HH-HHHT--E-EECCHHHH
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEECCCc----ch-h---hh-hhcC--c-eecCHHHH
Confidence 689999999999999999999987542 53 688888742 10 0 00 1110 0 11378888
Q ss_pred hcccCCcEEEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 407 VKVIKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 407 v~~vkptvLIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
++. +|+++=.-.. .++++++.++.|. +. ++.-.|.
T Consensus 198 l~~--aDiVil~vp~~~~t~~~i~~~~~~~mk---~g-ilin~sr 236 (333)
T 2d0i_A 198 LEK--SDIVILALPLTRDTYHIINEERVKKLE---GK-YLVNIGR 236 (333)
T ss_dssp HHH--CSEEEECCCCCTTTTTSBCHHHHHHTB---TC-EEEECSC
T ss_pred Hhh--CCEEEEcCCCChHHHHHhCHHHHhhCC---CC-EEEECCC
Confidence 886 8988744321 2578888888885 45 7766664
No 149
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=87.48 E-value=4.2 Score=40.99 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=81.7
Q ss_pred CCCceeccCCCch---HHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQGT---ASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (521)
Q Consensus 298 ~~~~~FnDDiQGT---aaV~LAgll~Alk~-------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~ 355 (521)
..|.|.|---..+ |=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 90 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 167 (333)
T 1dxy_A 90 YGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGF-- 167 (333)
T ss_dssp TTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred CCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHHHHHHHHC--
Confidence 4677777543333 44467777877551 34679999999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 009982 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (521)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (521)
|+ +++.+|+.. . .... .++. ..+|.|+++. .|+++=.-- ..++|+++.++
T Consensus 168 ---G~-------~V~~~d~~~----~--~~~~----~~~~----~~~l~ell~~--aDvV~~~~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 168 ---GA-------KVIAYDPYP----M--KGDH----PDFD----YVSLEDLFKQ--SDVIDLHVPGIEQNTHIINEAAFN 221 (333)
T ss_dssp ---TC-------EEEEECSSC----C--SSCC----TTCE----ECCHHHHHHH--CSEEEECCCCCGGGTTSBCHHHHH
T ss_pred ---CC-------EEEEECCCc----c--hhhH----hccc----cCCHHHHHhc--CCEEEEcCCCchhHHHHhCHHHHh
Confidence 54 588888753 1 1111 1121 2379999987 899885431 23578999999
Q ss_pred HHHcCCCCcEEEEcCCC
Q 009982 432 AMASFNEKPLILALSNP 448 (521)
Q Consensus 432 ~Ma~~~erPIIFaLSNP 448 (521)
.|. +..++.=.|.-
T Consensus 222 ~mk---~ga~lIn~srg 235 (333)
T 1dxy_A 222 LMK---PGAIVINTARP 235 (333)
T ss_dssp HSC---TTEEEEECSCT
T ss_pred hCC---CCcEEEECCCC
Confidence 996 56788877764
No 150
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.44 E-value=0.75 Score=46.32 Aligned_cols=110 Identities=9% Similarity=0.142 Sum_probs=61.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccC-CccCCchhc--hhhccc------cCCCCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS-RKDSLQHFK--KPWAHE------HEPVNN 402 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~-R~~~l~~~k--~~fa~~------~~~~~~ 402 (521)
.||.|+|+|..|.++|..|.+..... . .-..+++++|+..-+... +.+.+.... ..|-.. .....+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~----~-~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~ 96 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNN----Y-LFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSD 96 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHC----T-TBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCcc----C-CCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECC
Confidence 47999999999999999998752110 0 000468888875321100 000011100 001000 011246
Q ss_pred HHHHhcccCCcEEEEccCCCCCCCHHHHHHHHc----C-CCCcEEEEcCCCCC
Q 009982 403 LLDAVKVIKPTILIGSSGVGRTFTKEVIEAMAS----F-NEKPLILALSNPTS 450 (521)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~----~-~erPIIFaLSNPt~ 450 (521)
+.|+++. +|++| ++... ...+++++.+.. . .+..+|..++|-.+
T Consensus 97 ~~ea~~~--aDvVi-lav~~-~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~ 145 (375)
T 1yj8_A 97 LASVIND--ADLLI-FIVPC-QYLESVLASIKESESIKIASHAKAISLTKGFI 145 (375)
T ss_dssp THHHHTT--CSEEE-ECCCH-HHHHHHHHHHTC---CCCCTTCEEEECCCSCE
T ss_pred HHHHHcC--CCEEE-EcCCH-HHHHHHHHHHhhhhhccCCCCCEEEEeCCccc
Confidence 7888876 88777 33322 567888888875 3 34668888998654
No 151
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=87.42 E-value=1.3 Score=44.81 Aligned_cols=121 Identities=14% Similarity=0.119 Sum_probs=78.4
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcC
Q 009982 299 THLVFNDDIQ---GTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTK 359 (521)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~----------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G 359 (521)
.|+|.|---- .+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+... |
T Consensus 89 gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G 163 (324)
T 3hg7_A 89 DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHF-----G 163 (324)
T ss_dssp SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHT-----T
T ss_pred CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhC-----C
Confidence 4555554221 2344467777776552 35679999999999999999999998543 6
Q ss_pred CChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHHHc
Q 009982 360 APVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAMAS 435 (521)
Q Consensus 360 ~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~Ma~ 435 (521)
+ +++.+|+.. +. ... +.. .....+|.|+++. .|+++=.- ..-+.|+++.++.|.
T Consensus 164 ~-------~V~~~dr~~---~~----~~~----~~~-~~~~~~l~ell~~--aDvV~l~lPlt~~T~~li~~~~l~~mk- 221 (324)
T 3hg7_A 164 M-------KVLGVSRSG---RE----RAG----FDQ-VYQLPALNKMLAQ--ADVIVSVLPATRETHHLFTASRFEHCK- 221 (324)
T ss_dssp C-------EEEEECSSC---CC----CTT----CSE-EECGGGHHHHHHT--CSEEEECCCCCSSSTTSBCTTTTTCSC-
T ss_pred C-------EEEEEcCCh---HH----hhh----hhc-ccccCCHHHHHhh--CCEEEEeCCCCHHHHHHhHHHHHhcCC-
Confidence 4 688888754 11 111 111 1123578888887 88887532 223578888887775
Q ss_pred CCCCcEEEEcCCC
Q 009982 436 FNEKPLILALSNP 448 (521)
Q Consensus 436 ~~erPIIFaLSNP 448 (521)
+..++.=.|.-
T Consensus 222 --~gailIN~aRG 232 (324)
T 3hg7_A 222 --PGAILFNVGRG 232 (324)
T ss_dssp --TTCEEEECSCG
T ss_pred --CCcEEEECCCc
Confidence 67788877763
No 152
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=87.38 E-value=0.43 Score=47.33 Aligned_cols=110 Identities=18% Similarity=0.150 Sum_probs=66.2
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc---cccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL---i~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
.||+|.|| |..|..++..|+.. |.--..-...++++|...- ...... ++.+...+|..+.....++.+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~-----g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~~~~~~~~~di~~~~~~~~a~ 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG-----EMLGKDQPVILQLLEIPQAMKALEGVVM-ELEDCAFPLLAGLEATDDPKVAF 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT-----TTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCCCCCCCEEEEEeCCCchhhccchhh-hhhcccccccCCeEeccChHHHh
Confidence 48999997 99999999887642 4300000136999997420 000000 12111112322222225688899
Q ss_pred cccCCcEEEEccCCCCC--------------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 408 KVIKPTILIGSSGVGRT--------------FTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
++ +|++|=+.+.+.. .|.++++++.+++ .+.+++-.|||.
T Consensus 79 ~~--~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~ 133 (327)
T 1y7t_A 79 KD--ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA 133 (327)
T ss_dssp TT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred CC--CCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch
Confidence 86 9999977665532 3567788888876 666888899996
No 153
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.21 E-value=0.64 Score=47.36 Aligned_cols=102 Identities=21% Similarity=0.182 Sum_probs=60.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccc----cCCc--cCCchhchhhccccCCCCCHH
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV----SSRK--DSLQHFKKPWAHEHEPVNNLL 404 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~----~~R~--~~l~~~k~~fa~~~~~~~~L~ 404 (521)
..||.|+|+|+-|.++|..|.+. | .+++++|++--.. ..+. ..++..+ +........++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-----G-------~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~--l~~~i~~t~d~~ 94 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-----G-------QKVRLWSYESDHVDEMQAEGVNNRYLPNYP--FPETLKAYCDLK 94 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-----T-------CCEEEECSCHHHHHHHHHHSSBTTTBTTCC--CCTTEEEESCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHC-----C-------CeEEEEeCCHHHHHHHHHcCCCcccCCCCc--cCCCeEEECCHH
Confidence 36899999999999999998763 4 3577787741100 0000 0011110 000001124788
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
|+++. +|++| ++.+. .+.+++++.++.+. +..+|..++|-..
T Consensus 95 ea~~~--aDvVi-laVp~-~~~~~vl~~i~~~l~~~~ivvs~~kGi~ 137 (356)
T 3k96_A 95 ASLEG--VTDIL-IVVPS-FAFHEVITRMKPLIDAKTRIAWGTKGLA 137 (356)
T ss_dssp HHHTT--CCEEE-ECCCH-HHHHHHHHHHGGGCCTTCEEEECCCSCB
T ss_pred HHHhc--CCEEE-ECCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCC
Confidence 88876 78776 33332 46778888877644 4567778888553
No 154
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=87.20 E-value=6.5 Score=39.51 Aligned_cols=123 Identities=17% Similarity=0.137 Sum_probs=83.0
Q ss_pred cCCCceeccCCCch---HHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHH
Q 009982 297 GTTHLVFNDDIQGT---ASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEIS 355 (521)
Q Consensus 297 r~~~~~FnDDiQGT---aaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~ 355 (521)
+..|.|.|----.+ |=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 91 ~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~-- 168 (333)
T 1j4a_A 91 ELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGF-- 168 (333)
T ss_dssp HTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHT--
T ss_pred hCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHHHHHHHHHC--
Confidence 35677777543333 34478888887762 23568899999999999999999988642
Q ss_pred HhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHH
Q 009982 356 KQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIE 431 (521)
Q Consensus 356 ~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~ 431 (521)
|+ +++.+|+.. . ..+ ..++. ...+|.|+++. .|+++=.-. ..++++++.++
T Consensus 169 ---G~-------~V~~~d~~~----~--~~~----~~~~~---~~~~l~ell~~--aDvV~l~~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 169 ---GA-------KVITYDIFR----N--PEL----EKKGY---YVDSLDDLYKQ--ADVISLHVPDVPANVHMINDESIA 223 (333)
T ss_dssp ---TC-------EEEEECSSC----C--HHH----HHTTC---BCSCHHHHHHH--CSEEEECSCCCGGGTTCBSHHHHH
T ss_pred ---CC-------EEEEECCCc----c--hhH----HhhCe---ecCCHHHHHhh--CCEEEEcCCCcHHHHHHHhHHHHh
Confidence 64 588888742 1 101 11221 12379999986 899885432 23578889998
Q ss_pred HHHcCCCCcEEEEcCCCC
Q 009982 432 AMASFNEKPLILALSNPT 449 (521)
Q Consensus 432 ~Ma~~~erPIIFaLSNPt 449 (521)
.|. +..++.-.|.-.
T Consensus 224 ~mk---~ga~lIn~arg~ 238 (333)
T 1j4a_A 224 KMK---QDVVIVNVSRGP 238 (333)
T ss_dssp HSC---TTEEEEECSCGG
T ss_pred hCC---CCcEEEECCCCc
Confidence 886 577888887743
No 155
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=87.17 E-value=6.3 Score=40.19 Aligned_cols=121 Identities=14% Similarity=0.205 Sum_probs=82.5
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH----------h----------CCCcccceEEEeCcchHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQG---TASVVLAGVVAALKL----------I----------GGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (521)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~----------~----------g~~L~d~riv~~GAGsAg~Gia~ll~~~~ 354 (521)
..|+|.|----. +|=-+++-+|+..|- . +..|.+.++.|+|.|..|..+|+.+...
T Consensus 92 ~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~- 170 (343)
T 2yq5_A 92 YNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIGSAVAEIFSAM- 170 (343)
T ss_dssp --CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT-
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHHHHHHHHHhhC-
Confidence 367888864333 444568888877651 2 3468899999999999999999988642
Q ss_pred HHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHH
Q 009982 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVI 430 (521)
Q Consensus 355 ~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv 430 (521)
|+ +++.+|+.. . .... ..+ ...+|.|+++. .|+++=.-- .-+.|+++.+
T Consensus 171 ----G~-------~V~~~d~~~----~--~~~~----~~~----~~~~l~ell~~--aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 171 ----GA-------KVIAYDVAY----N--PEFE----PFL----TYTDFDTVLKE--ADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp ----TC-------EEEEECSSC----C--GGGT----TTC----EECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHH
T ss_pred ----CC-------EEEEECCCh----h--hhhh----ccc----cccCHHHHHhc--CCEEEEcCCCCHHHHHHhhHHHH
Confidence 64 688888753 1 1011 111 11389999987 999885532 2468999999
Q ss_pred HHHHcCCCCcEEEEcCCCC
Q 009982 431 EAMASFNEKPLILALSNPT 449 (521)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt 449 (521)
+.|. +..++.=.|.-.
T Consensus 224 ~~mk---~gailIN~aRg~ 239 (343)
T 2yq5_A 224 KEMK---KSAYLINCARGE 239 (343)
T ss_dssp HHSC---TTCEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCh
Confidence 9996 677888777633
No 156
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.13 E-value=1.8 Score=44.15 Aligned_cols=95 Identities=11% Similarity=0.210 Sum_probs=61.5
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHh
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAV 407 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav 407 (521)
++..||.|+|.|..|..+|..|.+. | .+++++|+. .++ .. .++.. .....++.|++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~-----G-------~~V~v~dr~----~~~---~~----~l~~~g~~~~~s~~e~~ 76 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKG-----G-------HECVVYDLN----VNA---VQ----ALEREGIAGARSIEEFC 76 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC----HHH---HH----HHHTTTCBCCSSHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC----HHH---HH----HHHHCCCEEeCCHHHHH
Confidence 3467999999999999999998763 5 357777763 111 11 12211 12346888888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCC
Q 009982 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNP 448 (521)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNP 448 (521)
+.. +||++| ++...+ -.+++++.+... .+.-||.-+||-
T Consensus 77 ~~a~~~DvVi-~~vp~~-~v~~vl~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 77 AKLVKPRVVW-LMVPAA-VVDSMLQRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HHSCSSCEEE-ECSCGG-GHHHHHHHHGGGCCTTCEEEECSSC
T ss_pred hcCCCCCEEE-EeCCHH-HHHHHHHHHHhhCCCCCEEEeCCCC
Confidence 874 568877 333344 778888887654 356688878774
No 157
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=87.13 E-value=2.1 Score=43.30 Aligned_cols=123 Identities=17% Similarity=0.322 Sum_probs=81.8
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDI---QGTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
..|+|.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 83 ~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~--- 159 (324)
T 3evt_A 83 AGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIYGTGQIGQSLAAKASAL--- 159 (324)
T ss_dssp TTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHT---
T ss_pred CCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEECcCHHHHHHHHHHHhC---
Confidence 4677777543 23344467777776542 26679999999999999999999988643
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (521)
|+ +++.+|+..- . .......+ ...+|.|+++. .|+++=.- ..-+.|+++.++.
T Consensus 160 --G~-------~V~~~dr~~~----~---~~~~~~~~-----~~~~l~ell~~--aDvV~l~lPlt~~t~~li~~~~l~~ 216 (324)
T 3evt_A 160 --GM-------HVIGVNTTGH----P---ADHFHETV-----AFTATADALAT--ANFIVNALPLTPTTHHLFSTELFQQ 216 (324)
T ss_dssp --TC-------EEEEEESSCC----C---CTTCSEEE-----EGGGCHHHHHH--CSEEEECCCCCGGGTTCBSHHHHHT
T ss_pred --CC-------EEEEECCCcc----h---hHhHhhcc-----ccCCHHHHHhh--CCEEEEcCCCchHHHHhcCHHHHhc
Confidence 64 6888887531 1 11111111 12478888887 89888432 1246899999988
Q ss_pred HHcCCCCcEEEEcCCCC
Q 009982 433 MASFNEKPLILALSNPT 449 (521)
Q Consensus 433 Ma~~~erPIIFaLSNPt 449 (521)
|. +..++.=.|.-.
T Consensus 217 mk---~gailIN~aRG~ 230 (324)
T 3evt_A 217 TK---QQPMLINIGRGP 230 (324)
T ss_dssp CC---SCCEEEECSCGG
T ss_pred CC---CCCEEEEcCCCh
Confidence 85 677888777633
No 158
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=87.10 E-value=2 Score=44.32 Aligned_cols=95 Identities=16% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
+..|.+.++.|+|.|..|-.+|+.+.. .|+ +++.+|+.. . .+ ... ...-...+|.|
T Consensus 171 ~~~l~gktvGIIGlG~IG~~vA~~l~~-----fG~-------~V~~~d~~~----~-~~---~~~----~~g~~~~~l~e 226 (365)
T 4hy3_A 171 ARLIAGSEIGIVGFGDLGKALRRVLSG-----FRA-------RIRVFDPWL----P-RS---MLE----ENGVEPASLED 226 (365)
T ss_dssp CCCSSSSEEEEECCSHHHHHHHHHHTT-----SCC-------EEEEECSSS----C-HH---HHH----HTTCEECCHHH
T ss_pred ccccCCCEEEEecCCcccHHHHHhhhh-----CCC-------EEEEECCCC----C-HH---HHh----hcCeeeCCHHH
Confidence 456889999999999999999998743 254 577787641 0 00 000 00111248999
Q ss_pred HhcccCCcEEEEc----cCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 406 AVKVIKPTILIGS----SGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 406 av~~vkptvLIG~----S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
+++. .|+++=. ....+.++++.++.|. +..++.=.|.-.
T Consensus 227 ll~~--aDvV~l~~Plt~~T~~li~~~~l~~mk---~gailIN~aRG~ 269 (365)
T 4hy3_A 227 VLTK--SDFIFVVAAVTSENKRFLGAEAFSSMR---RGAAFILLSRAD 269 (365)
T ss_dssp HHHS--CSEEEECSCSSCC---CCCHHHHHTSC---TTCEEEECSCGG
T ss_pred HHhc--CCEEEEcCcCCHHHHhhcCHHHHhcCC---CCcEEEECcCCc
Confidence 9987 9999843 2234689999999996 677888777643
No 159
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=86.85 E-value=0.75 Score=49.00 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.+||..++.+ |. +++++|.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~a-----G~-------~V~l~D~~ 86 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLA-----GI-------ETFLVVRN 86 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEECc
Confidence 6899999999999999998764 54 57777763
No 160
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.75 E-value=0.76 Score=45.25 Aligned_cols=48 Identities=8% Similarity=0.146 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.|+..+++..|.. .+.+++|+|||.+|.+++..|.+. |. ++|+++++.
T Consensus 105 ~G~~~~l~~~~~~-~~~~vlvlGaGgaarav~~~L~~~-----G~------~~i~v~nRt 152 (271)
T 1npy_A 105 IAIVKLIEKYHLN-KNAKVIVHGSGGMAKAVVAAFKNS-----GF------EKLKIYARN 152 (271)
T ss_dssp HHHHHHHHHTTCC-TTSCEEEECSSTTHHHHHHHHHHT-----TC------CCEEEECSC
T ss_pred HHHHHHHHHhCCC-CCCEEEEECCcHHHHHHHHHHHHC-----CC------CEEEEEeCC
Confidence 5666777665654 568999999999999998887653 64 679988874
No 161
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.58 E-value=0.58 Score=51.71 Aligned_cols=38 Identities=26% Similarity=0.428 Sum_probs=33.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|++.||+|+|||..|..+|+.|+.+ |+ .+|.++|.+=
T Consensus 323 kL~~arVLIVGaGGLGs~vA~~La~a-----GV------G~ItLvD~D~ 360 (615)
T 4gsl_A 323 IIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNGT 360 (615)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHT-----TC------CEEEEECCCB
T ss_pred HHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEcCCC
Confidence 67889999999999999999999886 75 7899999873
No 162
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=86.51 E-value=1.1 Score=42.26 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=56.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhc---hhhccccCCCCCHHHHhcc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK---KPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k---~~fa~~~~~~~~L~eav~~ 409 (521)
||.|+|+|..|..+|..|.+. | .+++++|+.- ++.+.+.... ..+-.. -. .+..++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~~~~-~~-~~~~~~~~~ 63 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-----G-------HEVQGWLRVP----QPYCSVNLVETDGSIFNES-LT-ANDPDFLAT 63 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSC----CSEEEEEEECTTSCEEEEE-EE-ESCHHHHHT
T ss_pred eEEEECcCHHHHHHHHHHHhC-----C-------CCEEEEEcCc----cceeeEEEEcCCCceeeee-ee-ecCccccCC
Confidence 799999999999999998753 4 3688888742 1111121100 000000 00 122466765
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
+|++|= +..+. -.+++++.++.+. +..+|..++|..
T Consensus 64 --~d~vi~-~v~~~-~~~~v~~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 64 --SDLLLV-TLKAW-QVSDAVKSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp --CSEEEE-CSCGG-GHHHHHHHHHTTSCTTSCEEEECSSS
T ss_pred --CCEEEE-EecHH-hHHHHHHHHHhhCCCCCEEEEecCCC
Confidence 898873 33332 3689999887643 456777788865
No 163
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.26 E-value=0.25 Score=44.25 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=54.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (521)
++.+.+|+|+|+|..|..+|+.|... .| .+++++|++- ++.+.+......... +..+...|.++
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~----~g-------~~V~vid~~~----~~~~~~~~~g~~~~~gd~~~~~~l~~~ 100 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRAR----YG-------KISLGIEIRE----EAAQQHRSEGRNVISGDATDPDFWERI 100 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHH----HC-------SCEEEEESCH----HHHHHHHHTTCCEEECCTTCHHHHHTB
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhc----cC-------CeEEEEECCH----HHHHHHHHCCCCEEEcCCCCHHHHHhc
Confidence 35567899999999999999988642 04 3688888741 111111111001110 11111124443
Q ss_pred --hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 407 --VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 407 --v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
++ ++|++|=++.. ..-+..++....+.+....|++.+|
T Consensus 101 ~~~~--~ad~vi~~~~~-~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 101 LDTG--HVKLVLLAMPH-HQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CSCC--CCCEEEECCSS-HHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred cCCC--CCCEEEEeCCC-hHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 43 48999865542 2334455555555554445555544
No 164
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.24 E-value=4.3 Score=40.43 Aligned_cols=90 Identities=10% Similarity=0.085 Sum_probs=64.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
..|.+.+|.|+|.|..|..+|+.+... |+ +++.+|+.. .. ... + ....+|.|+
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~dr~~----~~---~~~-----~---~~~~~l~el 170 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAF-----GM-------RVIAYTRSS----VD---QNV-----D---VISESPADL 170 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEECSSC----CC---TTC-----S---EECSSHHHH
T ss_pred eeeecchheeeccCchhHHHHHHHHhh-----Cc-------EEEEEeccc----cc---ccc-----c---cccCChHHH
Confidence 458899999999999999999998753 64 688888742 11 111 1 123589999
Q ss_pred hcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 407 VKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 407 v~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
++. .|+++=.- ..-+.++++.++.|. +..+|.=.|.-
T Consensus 171 l~~--aDiV~l~~P~t~~t~~li~~~~l~~mk---~gailIN~aRG 211 (290)
T 3gvx_A 171 FRQ--SDFVLIAIPLTDKTRGMVNSRLLANAR---KNLTIVNVARA 211 (290)
T ss_dssp HHH--CSEEEECCCCCTTTTTCBSHHHHTTCC---TTCEEEECSCG
T ss_pred hhc--cCeEEEEeeccccchhhhhHHHHhhhh---cCceEEEeehh
Confidence 987 89887432 123678889888885 67788877763
No 165
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.23 E-value=0.56 Score=49.55 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=63.7
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHc-CCCcee--ccCCCchHHHHHHHHHHHHHHhCC--------Ccc
Q 009982 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYG-TTHLVF--NDDIQGTASVVLAGVVAALKLIGG--------TLA 330 (521)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr-~~~~~F--nDDiQGTaaV~LAgll~Alk~~g~--------~L~ 330 (521)
+..+++.+...+ ++ |.|+-+......++-++|. ..+|++ |+..-+.+.....-|+..+..... .-.
T Consensus 135 ~~~~l~~~a~~~-~~--v~~~~vd~~~~~~~~~~~~i~svPt~~i~g~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~ 211 (521)
T 1hyu_A 135 VVQALNLMAVLN-PR--IKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRD 211 (521)
T ss_dssp HHHHHHHHHHHC-TT--EEEEEEETTTCHHHHHHTTCCSSSEEEETTEEEEESCCCHHHHHHHHCCSSCCHHHHHHHTSC
T ss_pred HHHHHHHHHhHc-Cc--eEEEEEechhhHHHHHHhCCCccCEEEECCEEEecCCCCHHHHHHHHhhcccccccccccccC
Confidence 555666666677 44 5555444445567888886 467754 665566666666667766543210 112
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|+|+|||.||+..|..+.+. |+ ++.++|.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~-----G~-------~v~lie~~ 244 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARK-----GI-------RTGLMGER 244 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cccEEEECCcHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 45799999999999999887652 53 56777753
No 166
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.08 E-value=0.98 Score=45.27 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=65.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCC--CCHHHHhccc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPV--NNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~--~~L~eav~~v 410 (521)
||.|+|||..|..+|-+|+.. |+ ...+.|+|..-=..++-.-+|.+- .+|....... .+--+++++
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~G~a~DL~h~-~~~~~~~~~i~~~~d~~~~~~- 69 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLN-----LD-----VDEIALVDIAEDLAVGEAMDLAHA-AAGIDKYPKIVGGADYSLLKG- 69 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----SC-----CSEEEEECSSHHHHHHHHHHHHHH-HGGGTCCCEEEEESCGGGGTT-
T ss_pred EEEEECcCHHHHHHHHHHHhC-----CC-----CCEEEEEeCCCCcchhhhhhhhcc-cccCCCCCeEecCCCHHHhCC-
Confidence 799999999999999887653 54 257999997421111111113221 1222111111 222356776
Q ss_pred CCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 411 KPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 411 kptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.|++|=+.+.+ |- +-+++++++++++.+.||+-.|||.
T Consensus 70 -aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPv 121 (294)
T 2x0j_A 70 -SEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPM 121 (294)
T ss_dssp -CSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred -CCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 99998666654 31 1246788888999999999999996
No 167
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.07 E-value=1.1 Score=42.98 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=56.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
-.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-.. .....++.++++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~-~~~~~~~~~~~~~- 66 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-----HP-----HYKIVGYNRSD-------RSRDIALERGIV-DEATADFKVFAAL- 66 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSH-------HHHHHHHHTTSC-SEEESCTTTTGGG-
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-----CC-----CcEEEEEcCCH-------HHHHHHHHcCCc-ccccCCHHHhhcC-
Confidence 35899999999999999988653 32 14688888641 111111110000 0012356666765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC--CCCcEEEEcCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASF--NEKPLILALSNP 448 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~--~erPIIFaLSNP 448 (521)
+|++| ++.++... +++++.+..+ .+..||.-+||-
T Consensus 67 -aDvVi-lavp~~~~-~~v~~~l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 67 -ADVII-LAVPIKKT-IDFIKILADLDLKEDVIITDAGST 103 (290)
T ss_dssp -CSEEE-ECSCHHHH-HHHHHHHHTSCCCTTCEEECCCSC
T ss_pred -CCEEE-EcCCHHHH-HHHHHHHHhcCCCCCCEEEECCCC
Confidence 78777 44434333 7888887754 355677666663
No 168
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=85.87 E-value=0.79 Score=44.67 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.+||..++.. |. +++++|+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-----G~-------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-----GH-------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 5899999999999999998763 53 68888874
No 169
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=85.83 E-value=4.4 Score=40.98 Aligned_cols=121 Identities=14% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH-------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 299 THLVFNDDIQ---GTASVVLAGVVAALKL-------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~-------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
.|+|.|---- .+|=-+++-+|+..|- .|..|.+.++.|+|.|..|-.+|+.+...
T Consensus 87 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~--- 163 (334)
T 2pi1_A 87 GILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAF--- 163 (334)
T ss_dssp TCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHT---
T ss_pred CeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHHHHC---
Confidence 4555554222 2444567777776642 35679999999999999999999998643
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (521)
|+ +++.+|+..- . . . ....-...+|.|+++. .|+++=.- ...+.|+++.++.
T Consensus 164 --G~-------~V~~~d~~~~------~-~--~----~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 164 --GM-------KVLCYDVVKR------E-D--L----KEKGCVYTSLDELLKE--SDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp --TC-------EEEEECSSCC------H-H--H----HHTTCEECCHHHHHHH--CSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred --cC-------EEEEECCCcc------h-h--h----HhcCceecCHHHHHhh--CCEEEEeCCCChHHHHhhCHHHHhh
Confidence 54 6888887421 1 1 0 0001112359999987 99888542 2346899999999
Q ss_pred HHcCCCCcEEEEcCCCC
Q 009982 433 MASFNEKPLILALSNPT 449 (521)
Q Consensus 433 Ma~~~erPIIFaLSNPt 449 (521)
|. +..|+.=.|.-.
T Consensus 220 mk---~gailIN~aRg~ 233 (334)
T 2pi1_A 220 MK---DGVYLINTARGK 233 (334)
T ss_dssp SC---TTEEEEECSCGG
T ss_pred CC---CCcEEEECCCCc
Confidence 95 677888787643
No 170
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.43 E-value=1.9 Score=45.92 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=60.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa-~~~~~~~~L~eav~~ 409 (521)
.+|.|+|+|..|.++|..|++. |. +++++|+.- + .+....+ ... .......++.|+++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~-----G~-------~V~v~dr~~----~---~~~~l~~~~~~~~gi~~~~s~~e~v~~ 71 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH-----GF-------TVCAYNRTQ----S---KVDHFLANEAKGKSIIGATSIEDFISK 71 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS----H---HHHHHHHTTTTTSSEECCSSHHHHHHT
T ss_pred CCEEEEeeHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHcccccCCCeEEeCCHHHHHhc
Confidence 4899999999999999998763 53 578887631 1 1111111 000 011123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
. +||++| ++.+.+...+++++.+...- +..||.-+||-.
T Consensus 72 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~ 112 (497)
T 2p4q_A 72 LKRPRKVM-LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSH 112 (497)
T ss_dssp SCSSCEEE-ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred CCCCCEEE-EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 3 478776 44444456778888776543 346888888754
No 171
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.33 E-value=0.44 Score=38.60 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=51.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-cccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~~~~~~~~L~eav~~ 409 (521)
..+|+|+|+|..|..+++.+... |. .+++++|++. .+.+.+......+. -+.....++.++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-----g~------~~v~~~~r~~----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-----SN------YSVTVADHDL----AALAVLNRMGVATKQVDAKDEAGLAKALGG 69 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-----SS------EEEEEEESCH----HHHHHHHTTTCEEEECCTTCHHHHHHHTTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-----CC------ceEEEEeCCH----HHHHHHHhCCCcEEEecCCCHHHHHHHHcC
Confidence 46899999999999999888652 41 3688888741 11111110000111 111122356777764
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMASF 436 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~ 436 (521)
+|++|=+.+ ..++..+++.+.+.
T Consensus 70 --~d~vi~~~~--~~~~~~~~~~~~~~ 92 (118)
T 3ic5_A 70 --FDAVISAAP--FFLTPIIAKAAKAA 92 (118)
T ss_dssp --CSEEEECSC--GGGHHHHHHHHHHT
T ss_pred --CCEEEECCC--chhhHHHHHHHHHh
Confidence 999996663 35677888777653
No 172
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=85.08 E-value=1.1 Score=46.28 Aligned_cols=96 Identities=20% Similarity=0.320 Sum_probs=54.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-----------ccCCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-----------EHEPV 400 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-----------~~~~~ 400 (521)
.||+|+|||-.|..+|+.|++. |- ...++.++|++ .++ +......+.. +..+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~-----g~----~~~~V~v~~r~----~~~---~~~la~~l~~~~~~~~~~~~~D~~d~ 65 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMN-----RE----VFSHITLASRT----LSK---CQEIAQSIKAKGYGEIDITTVDADSI 65 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTC-----TT----TCCEEEEEESC----HHH---HHHHHHHHHHTTCCCCEEEECCTTCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CC----CceEEEEEECC----HHH---HHHHHHHhhhhcCCceEEEEecCCCH
Confidence 3899999997777777766542 31 01368888874 111 2111111211 11122
Q ss_pred CCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 401 NNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 401 ~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.++.++++..++|++|=+++. .+..+++++..+. ...+| -+|+
T Consensus 66 ~~l~~~l~~~~~DvVin~ag~--~~~~~v~~a~l~~-g~~vv-D~a~ 108 (405)
T 4ina_A 66 EELVALINEVKPQIVLNIALP--YQDLTIMEACLRT-GVPYL-DTAN 108 (405)
T ss_dssp HHHHHHHHHHCCSEEEECSCG--GGHHHHHHHHHHH-TCCEE-ESSC
T ss_pred HHHHHHHHhhCCCEEEECCCc--ccChHHHHHHHHh-CCCEE-EecC
Confidence 468888988899999977653 2456676665443 34444 2544
No 173
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=85.06 E-value=6 Score=40.01 Aligned_cols=97 Identities=15% Similarity=0.084 Sum_probs=63.2
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.+|.|+|.|..|..+|+.+... .|+ +++.+|+..- + ....+ .+ ......+|.|
T Consensus 158 ~~~l~g~~vgIIG~G~IG~~vA~~l~~~----~G~-------~V~~~d~~~~----~---~~~~~-~~--g~~~~~~l~e 216 (348)
T 2w2k_A 158 AHNPRGHVLGAVGLGAIQKEIARKAVHG----LGM-------KLVYYDVAPA----D---AETEK-AL--GAERVDSLEE 216 (348)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHT----TCC-------EEEEECSSCC----C---HHHHH-HH--TCEECSSHHH
T ss_pred CcCCCCCEEEEEEECHHHHHHHHHHHHh----cCC-------EEEEECCCCc----c---hhhHh-hc--CcEEeCCHHH
Confidence 5679999999999999999999988622 253 6888887421 1 11111 00 0011247888
Q ss_pred HhcccCCcEEEEccC----CCCCCCHHHHHHHHcCCCCcEEEEcCCC
Q 009982 406 AVKVIKPTILIGSSG----VGRTFTKEVIEAMASFNEKPLILALSNP 448 (521)
Q Consensus 406 av~~vkptvLIG~S~----~~g~Ft~evv~~Ma~~~erPIIFaLSNP 448 (521)
+++. .|+++=.-- ..+.++++.++.|. +..+|.-.|.-
T Consensus 217 ll~~--aDvVil~vp~~~~t~~li~~~~l~~mk---~gailin~srg 258 (348)
T 2w2k_A 217 LARR--SDCVSVSVPYMKLTHHLIDEAFFAAMK---PGSRIVNTARG 258 (348)
T ss_dssp HHHH--CSEEEECCCCSGGGTTCBCHHHHHHSC---TTEEEEECSCG
T ss_pred Hhcc--CCEEEEeCCCChHHHHHhhHHHHhcCC---CCCEEEECCCC
Confidence 8886 898875421 23678888888885 56677766653
No 174
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=84.86 E-value=3.8 Score=42.62 Aligned_cols=95 Identities=12% Similarity=0.038 Sum_probs=63.2
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
+..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. .. .... +.+ ......+|.|
T Consensus 186 ~~~l~gktvGIIGlG~IG~~vA~~l~a~-----G~-------~V~~~d~~~----~~---~~~~-~~~--G~~~~~~l~e 243 (393)
T 2nac_A 186 AYDLEAMHVGTVAAGRIGLAVLRRLAPF-----DV-------HLHYTDRHR----LP---ESVE-KEL--NLTWHATRED 243 (393)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHGGG-----TC-------EEEEECSSC----CC---HHHH-HHH--TCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEEcCCc----cc---hhhH-hhc--CceecCCHHH
Confidence 5679999999999999999999987542 53 578888632 10 1000 001 0011247888
Q ss_pred HhcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+++. .|+++=.- ...++|+++.++.|. +..+|.=.|.
T Consensus 244 ll~~--aDvV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aR 284 (393)
T 2nac_A 244 MYPV--CDVVTLNCPLHPETEHMINDETLKLFK---RGAYIVNTAR 284 (393)
T ss_dssp HGGG--CSEEEECSCCCTTTTTCBSHHHHTTSC---TTEEEEECSC
T ss_pred HHhc--CCEEEEecCCchHHHHHhhHHHHhhCC---CCCEEEECCC
Confidence 8886 89887542 223678888888885 5678887776
No 175
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=84.85 E-value=3.3 Score=43.39 Aligned_cols=82 Identities=23% Similarity=0.341 Sum_probs=53.6
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
--|++|+|+ |-+|.|-++.+... |.. ..++..+|.+= ..+.. +| +.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-----Ga~----~~~V~v~D~~~---~~~g~-------~~-----------~~i~~ 263 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-----GIP----DANILKWDIKE---TSRGG-------PF-----------DEIPQ 263 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-----TCC----GGGEEEECHHH---HTTCS-------CC-----------THHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-----CCC----cCceEEeeccc---cccCC-------ch-----------hhHhh
Confidence 468999999 99999999888653 541 12566666641 11100 01 23544
Q ss_pred cCCcEEEEccCC----CCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGV----GRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~----~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.|++||+--. |-++|+|+|+.|.+ +--+|.=+|
T Consensus 264 --aDivIn~vlig~~aP~Lvt~e~v~~m~k--~gsVIVDVA 300 (394)
T 2qrj_A 264 --ADIFINCIYLSKPIAPFTNMEKLNNPNR--RLRTVVDVS 300 (394)
T ss_dssp --SSEEEECCCCCSSCCCSCCHHHHCCTTC--CCCEEEETT
T ss_pred --CCEEEECcCcCCCCCcccCHHHHhcCcC--CCeEEEEEe
Confidence 8999998764 56899999999931 445665554
No 176
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.72 E-value=1 Score=37.54 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=51.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh----hcc-ccCCCCCHHH
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP----WAH-EHEPVNNLLD 405 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~----fa~-~~~~~~~L~e 405 (521)
+.+|+|+|+|..|..+|+.|... | .+++++|++- ++ +...+.. +.. +......|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~-----g-------~~v~~~d~~~----~~---~~~~~~~~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK-----G-------HDIVLIDIDK----DI---CKKASAEIDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESCH----HH---HHHHHHHCSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCH----HH---HHHHHHhcCcEEEEcCCCCHHHHHH
Confidence 35899999999999999888652 4 3688898741 11 1111111 111 1111112333
Q ss_pred H-hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 406 A-VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 406 a-v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
+ ++ ++|++|=+.... ..+..+.+...+.+...||.-.+||.
T Consensus 65 ~~~~--~~d~vi~~~~~~-~~~~~~~~~~~~~~~~~ii~~~~~~~ 106 (140)
T 1lss_A 65 AGIE--DADMYIAVTGKE-EVNLMSSLLAKSYGINKTIARISEIE 106 (140)
T ss_dssp TTTT--TCSEEEECCSCH-HHHHHHHHHHHHTTCCCEEEECSSTT
T ss_pred cCcc--cCCEEEEeeCCc-hHHHHHHHHHHHcCCCEEEEEecCHh
Confidence 2 33 489988765432 22222333333445566777666664
No 177
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=84.63 E-value=0.48 Score=45.30 Aligned_cols=101 Identities=14% Similarity=0.178 Sum_probs=55.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc------ccCCCCCHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH------EHEPVNNLLD 405 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~------~~~~~~~L~e 405 (521)
.||.|+|+|..|..+|..|.+. | .+++++|++.- +.+.+......... ..-...+..|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~r~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-----G-------NDVTLIDQWPA----HIEAIRKNGLIADFNGEEVVANLPIFSPEE 67 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----HHHHHHHHCEEEEETTEEEEECCCEECGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC-----C-------CcEEEEECCHH----HHHHHHhCCEEEEeCCCeeEecceeecchh
Confidence 4899999999999999988653 4 36888887421 00001100000000 0000112223
Q ss_pred Hhccc-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 406 AVKVI-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 406 av~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
+.+.+ ++|++|= +..+ -..+++++.++.+- +..+|..++|...
T Consensus 68 ~~~~~~~~d~vi~-~v~~-~~~~~v~~~l~~~l~~~~~iv~~~~g~~ 112 (316)
T 2ew2_A 68 IDHQNEQVDLIIA-LTKA-QQLDAMFKAIQPMITEKTYVLCLLNGLG 112 (316)
T ss_dssp CCTTSCCCSEEEE-CSCH-HHHHHHHHHHGGGCCTTCEEEECCSSSC
T ss_pred hcccCCCCCEEEE-Eecc-ccHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 33211 3788773 3333 24688888887643 4678888998653
No 178
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=84.55 E-value=0.66 Score=47.39 Aligned_cols=120 Identities=21% Similarity=0.213 Sum_probs=67.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---cccCCCCCHHHH
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---HEHEPVNNLLDA 406 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~~~~~~~~L~ea 406 (521)
.+.||+|+|||.+|-.+|+.|++. .++.++|+. .++ +......+. -+..+..+|.++
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-------------~~V~V~~R~----~~~---a~~la~~~~~~~~d~~~~~~l~~l 74 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------------FDVYIGDVN----NEN---LEKVKEFATPLKVDASNFDKLVEV 74 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------------SEEEEEESC----HHH---HHHHTTTSEEEECCTTCHHHHHHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-------------CeEEEEECC----HHH---HHHHHhhCCeEEEecCCHHHHHHH
Confidence 357999999999999999887542 357888874 222 211111121 011223568888
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcc
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPF 478 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv 478 (521)
+++ +|++|-+.. . .+..+++++-.+ ..-.++-+|.-....+.-.++|.+ .|. .+..|+-|+|-
T Consensus 75 l~~--~DvVIn~~P-~-~~~~~v~~a~l~--~G~~~vD~s~~~~~~~~l~~~Ak~--aG~-~~l~g~G~dPG 137 (365)
T 2z2v_A 75 MKE--FELVIGALP-G-FLGFKSIKAAIK--SKVDMVDVSFMPENPLELRDEAEK--AQV-TIVFDAGFAPG 137 (365)
T ss_dssp HTT--CSCEEECCC-H-HHHHHHHHHHHH--TTCCEEECCCCSSCGGGGHHHHHH--TTC-EEECSCBTTTB
T ss_pred HhC--CCEEEECCC-h-hhhHHHHHHHHH--hCCeEEEccCCcHHHHHHHHHHHH--cCC-EEEECCCCcch
Confidence 886 899997632 2 356677665443 233456677622112222345543 353 34456557764
No 179
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.47 E-value=0.51 Score=48.03 Aligned_cols=130 Identities=18% Similarity=0.231 Sum_probs=78.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHH
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLD 405 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~e 405 (521)
+....||.|+|||..|.++|-.++.. |+ ...+.++|.+-=..++-.-+|.+. ..|.... ....+..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~-----~~-----~~el~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~~~d~~- 83 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMK-----DL-----ADELALVDVIEDKLKGEMMDLQHG-SLFLKTPKIVSSKDYS- 83 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCHHHHHHHHHHHHHT-GGGCSCCEEEECSSGG-
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhC-----CC-----CceEEEEeCChHHHHHHHHhhhhh-hhccCCCeEEEcCCHH-
Confidence 34567999999999999999888653 54 357999997411001000012221 1232211 1123454
Q ss_pred HhcccCCcEEEEccCCC---C-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC--cEEE
Q 009982 406 AVKVIKPTILIGSSGVG---R-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG--RAIF 469 (521)
Q Consensus 406 av~~vkptvLIG~S~~~---g-----~------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G--~aif 469 (521)
++++ .|++|=+.+.+ | + +-+++.+.|++++..-+|+-.|||. .+..+-+++.+.= +-+|
T Consensus 84 ~~~~--aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv---di~t~~~~k~sg~p~~rvi 158 (331)
T 4aj2_A 84 VTAN--SKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPV---DILTYVAWKISGFPKNRVI 158 (331)
T ss_dssp GGTT--EEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHHCCCGGGEE
T ss_pred HhCC--CCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChH---HHHHHHHHHHhCCCHHHEE
Confidence 5776 89887444333 3 1 2257888889999999999999996 3455556665411 3467
Q ss_pred ecCCC
Q 009982 470 ASGSP 474 (521)
Q Consensus 470 AsGSP 474 (521)
.+|.-
T Consensus 159 G~gt~ 163 (331)
T 4aj2_A 159 GSGCN 163 (331)
T ss_dssp ECTTH
T ss_pred eeccc
Confidence 77643
No 180
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=84.46 E-value=4.6 Score=40.41 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=77.2
Q ss_pred CCCceeccCCCc---hHHHHHHHHHHHHHH---------------------hCCCcccceEEEeCcchHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQG---TASVVLAGVVAALKL---------------------IGGTLAEHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 298 ~~~~~FnDDiQG---TaaV~LAgll~Alk~---------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
..+.|.|----. +|=-+++.+|+..|- .+..|.+.+|.|+|.|..|-.+|+.+...
T Consensus 89 ~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 168 (320)
T 1gdh_A 89 RGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGF 168 (320)
T ss_dssp TTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTT
T ss_pred CCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHHHHHHHHHC
Confidence 356666644322 344467777777653 23568899999999999999999988542
Q ss_pred HHHhcCCChhhhcCcEEEEec-CCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEccC----CCCCCCHH
Q 009982 354 ISKQTKAPVEETRKKICLVDS-KGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKE 428 (521)
Q Consensus 354 ~~~~~G~~~eeA~~~i~lvDs-~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~e 428 (521)
|+ +++.+|+ .. . . . ..+ .+ ......+|.|+++. .|+++=.-- ..++++++
T Consensus 169 -----G~-------~V~~~d~~~~----~--~-~-~~~-~~--g~~~~~~l~ell~~--aDvVil~~p~~~~t~~~i~~~ 223 (320)
T 1gdh_A 169 -----DM-------DIDYFDTHRA----S--S-S-DEA-SY--QATFHDSLDSLLSV--SQFFSLNAPSTPETRYFFNKA 223 (320)
T ss_dssp -----TC-------EEEEECSSCC----C--H-H-HHH-HH--TCEECSSHHHHHHH--CSEEEECCCCCTTTTTCBSHH
T ss_pred -----CC-------EEEEECCCCc----C--h-h-hhh-hc--CcEEcCCHHHHHhh--CCEEEEeccCchHHHhhcCHH
Confidence 53 6888887 42 0 0 0 000 01 00112478898886 898874421 23578888
Q ss_pred HHHHHHcCCCCcEEEEcCC
Q 009982 429 VIEAMASFNEKPLILALSN 447 (521)
Q Consensus 429 vv~~Ma~~~erPIIFaLSN 447 (521)
.++.|. +.-+|.-.|.
T Consensus 224 ~l~~mk---~gailIn~ar 239 (320)
T 1gdh_A 224 TIKSLP---QGAIVVNTAR 239 (320)
T ss_dssp HHTTSC---TTEEEEECSC
T ss_pred HHhhCC---CCcEEEECCC
Confidence 888775 5678887776
No 181
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=84.29 E-value=2.1 Score=43.08 Aligned_cols=123 Identities=14% Similarity=0.117 Sum_probs=80.7
Q ss_pred CCCceeccCC----CchHHHHHHHHHHHHHH----------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 009982 298 TTHLVFNDDI----QGTASVVLAGVVAALKL----------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (521)
Q Consensus 298 ~~~~~FnDDi----QGTaaV~LAgll~Alk~----------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~ 357 (521)
..+++.|--- +.+|=-+++.+|+..|- .+..|.+.++.|+|.|..|..+|+.+...
T Consensus 86 ~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~---- 161 (315)
T 3pp8_A 86 ASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAW---- 161 (315)
T ss_dssp TTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTT----
T ss_pred CCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHC----
Confidence 4566665321 34555677888877763 25678999999999999999999988542
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHHH
Q 009982 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEAM 433 (521)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~M 433 (521)
|+ +++.+|+..- ...... .+ ....+|.|+++. .|+++=.- ..-+.|+++.++.|
T Consensus 162 -G~-------~V~~~dr~~~-------~~~~~~-~~----~~~~~l~ell~~--aDiV~l~~Plt~~t~~li~~~~l~~m 219 (315)
T 3pp8_A 162 -GF-------PLRCWSRSRK-------SWPGVE-SY----VGREELRAFLNQ--TRVLINLLPNTAQTVGIINSELLDQL 219 (315)
T ss_dssp -TC-------CEEEEESSCC-------CCTTCE-EE----ESHHHHHHHHHT--CSEEEECCCCCGGGTTCBSHHHHTTS
T ss_pred -CC-------EEEEEcCCch-------hhhhhh-hh----cccCCHHHHHhh--CCEEEEecCCchhhhhhccHHHHhhC
Confidence 64 5788887421 111111 11 011478898886 89887431 12368889888888
Q ss_pred HcCCCCcEEEEcCCCC
Q 009982 434 ASFNEKPLILALSNPT 449 (521)
Q Consensus 434 a~~~erPIIFaLSNPt 449 (521)
. +..++.=.|.-.
T Consensus 220 k---~gailIN~aRG~ 232 (315)
T 3pp8_A 220 P---DGAYVLNLARGV 232 (315)
T ss_dssp C---TTEEEEECSCGG
T ss_pred C---CCCEEEECCCCh
Confidence 5 677888777643
No 182
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.25 E-value=0.49 Score=43.16 Aligned_cols=94 Identities=15% Similarity=0.166 Sum_probs=59.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc---c--ccCCCCCHHHH
Q 009982 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA---H--EHEPVNNLLDA 406 (521)
Q Consensus 333 riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa---~--~~~~~~~L~ea 406 (521)
||+|+| +|..|..+|+.+.+. | .+++++|++- ++ ....++.+. . +.. ..++.++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-----g-------~~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~~-~~~~~~~ 61 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-----G-------HEIVVGSRRE----EK---AEAKAAEYRRIAGDASIT-GMKNEDA 61 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEEESSH----HH---HHHHHHHHHHHHSSCCEE-EEEHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-----C-------CEEEEEeCCH----HH---HHHHHHHhccccccCCCC-hhhHHHH
Confidence 789999 999999999988642 4 3688888741 11 111111110 0 011 2468888
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
++. +|++|=+.. + -..+++++.+....+..+|.-++|+.+
T Consensus 62 ~~~--~D~Vi~~~~-~-~~~~~~~~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 62 AEA--CDIAVLTIP-W-EHAIDTARDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHH--CSEEEECSC-H-HHHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred Hhc--CCEEEEeCC-h-hhHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 887 899884433 3 235677777654334678999999764
No 183
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.09 E-value=0.57 Score=47.89 Aligned_cols=107 Identities=17% Similarity=0.341 Sum_probs=65.2
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHH
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 406 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~ea 406 (521)
+...||.|+|| |..|..+|-.++. .|+ ...+.++|.+-=..++-.-+|.+. .|... ..-..++.++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~-----~g~-----~~evvLiDi~~~k~~g~a~DL~~~--~~~~~~i~~t~d~~~a 73 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAM-----MRL-----TPNLCLYDPFAVGLEGVAEEIRHC--GFEGLNLTFTSDIKEA 73 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHH-----TTC-----CSCEEEECSCHHHHHHHHHHHHHH--CCTTCCCEEESCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHh-----cCC-----CCEEEEEeCCchhHHHHHHhhhhC--cCCCCceEEcCCHHHH
Confidence 34679999998 9999999966654 365 246999997411001000013222 22110 0112578899
Q ss_pred hcccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCC
Q 009982 407 VKVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPT 449 (521)
Q Consensus 407 v~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt 449 (521)
+++ +|++|=+.+.+ | ..-+++++.+.+++.+-+ |+-.|||.
T Consensus 74 l~d--ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 74 LTD--AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPA 129 (343)
T ss_dssp HTT--EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSH
T ss_pred hCC--CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCch
Confidence 998 89988544433 2 123567778888998885 88899995
No 184
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.90 E-value=0.54 Score=48.03 Aligned_cols=124 Identities=15% Similarity=0.154 Sum_probs=75.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVK 408 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~ 408 (521)
..||.|+|||..|.++|-.++.. |+ ...+.++|..-=..++-.-+|.+. ..|.... ....++.+ ++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~-----g~-----~~ev~L~Di~~~~~~g~a~DL~~~-~~~~~~~~i~~t~d~~~-~~ 88 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK-----DL-----ADEVALVDVMEDKLKGEMMDLEHG-SLFLHTAKIVSGKDYSV-SA 88 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH-----CC-----CSEEEEECSCHHHHHHHHHHHHHH-GGGSCCSEEEEESSSCS-CS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----CC-----CCeEEEEECCHHHHHHHHHHhhhh-hhcccCCeEEEcCCHHH-hC
Confidence 47999999999999999988764 55 247999997311000000012221 2332211 11135554 66
Q ss_pred ccCCcEEEEccCC---CC-----C------CCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCC---cEEEec
Q 009982 409 VIKPTILIGSSGV---GR-----T------FTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKG---RAIFAS 471 (521)
Q Consensus 409 ~vkptvLIG~S~~---~g-----~------Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G---~aifAs 471 (521)
+ +|++|=+.+. +| + .-+++++.+.++++..+|+-.|||. .....-+++.+ | +-+|.+
T Consensus 89 d--aDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPv---di~t~~~~k~s-g~p~~rViG~ 162 (330)
T 3ldh_A 89 G--SKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELG---TDKNKQDWKLS-GLPMHRIIGS 162 (330)
T ss_dssp S--CSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSH---HHHHHHHHHHH-CCCGGGEECC
T ss_pred C--CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCcc---HHHHHHHHHHh-CCCHHHeecc
Confidence 6 9998833333 33 1 2356778888999999999999995 34555566654 3 446676
Q ss_pred C
Q 009982 472 G 472 (521)
Q Consensus 472 G 472 (521)
|
T Consensus 163 g 163 (330)
T 3ldh_A 163 G 163 (330)
T ss_dssp T
T ss_pred c
Confidence 5
No 185
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=83.84 E-value=0.82 Score=46.50 Aligned_cols=38 Identities=26% Similarity=0.418 Sum_probs=33.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|++.+|+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 32 ~~L~~~~VlivG~GGlG~~ia~~La~~-----Gv------g~itlvD~d 69 (346)
T 1y8q_A 32 KRLRASRVLLVGLKGLGAEIAKNLILA-----GV------KGLTMLDHE 69 (346)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHHH-----TC------SEEEEECCC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEEECC
Confidence 367789999999999999999999886 75 789999976
No 186
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=83.71 E-value=1.8 Score=42.81 Aligned_cols=99 Identities=9% Similarity=0.122 Sum_probs=58.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc-CCCCCHHHHhcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH-EPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~-~~~~~L~eav~~ 409 (521)
..||.|+|+|..|.++|..|.+. |.. ...+++++|+.- ++ +.+.. +.... .-..+..|+++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~-----G~~---~~~~V~v~~r~~----~~-~~~~~----l~~~G~~~~~~~~e~~~~ 84 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA-----GVL---AAHKIMASSPDM----DL-ATVSA----LRKMGVKLTPHNKETVQH 84 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT-----TSS---CGGGEEEECSCT----TS-HHHHH----HHHHTCEEESCHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-----CCC---CcceEEEECCCc----cH-HHHHH----HHHcCCEEeCChHHHhcc
Confidence 45899999999999999988763 531 114688888641 10 01111 11110 111357777776
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (521)
+|++| ++..+ ...+++++.+... .+..+|.-+||..+
T Consensus 85 --aDvVi-lav~~-~~~~~vl~~l~~~l~~~~ivvs~s~gi~ 122 (322)
T 2izz_A 85 --SDVLF-LAVKP-HIIPFILDEIGADIEDRHIVVSCAAGVT 122 (322)
T ss_dssp --CSEEE-ECSCG-GGHHHHHHHHGGGCCTTCEEEECCTTCC
T ss_pred --CCEEE-EEeCH-HHHHHHHHHHHhhcCCCCEEEEeCCCCC
Confidence 77766 33333 4567777777643 34557777888764
No 187
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=83.47 E-value=0.53 Score=47.83 Aligned_cols=131 Identities=16% Similarity=0.135 Sum_probs=77.9
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC---ccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG---LIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 332 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G---Li~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
.||+|.| ||..|..+|-+|+.. |+-.++-.-.+.|+|... .+.-... +|.+...+|.++.....++.+++
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~-----~~~~e~~~~~l~L~Di~~~~~~~~g~a~-DL~~~~~~~~~~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG-----SVFGKDQPIILVLLDITPMMGVLDGVLM-ELQDCALPLLKDVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT-----TTTCTTCCEEEEEECCGGGHHHHHHHHH-HHHHTCCTTEEEEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCccccCCCEEEEEeCCCccccchhhHh-hhHhhhhcccCCEEEcCCcHHHh
Confidence 5899999 799999999888652 441110011289999853 1111111 13332223433222235788899
Q ss_pred cccCCcEEEEccCCC---C-----------CCCHHHHHHHHcCCCCcE-EEEcCCCCCCCCCCHHHHhcccCC--cEEEe
Q 009982 408 KVIKPTILIGSSGVG---R-----------TFTKEVIEAMASFNEKPL-ILALSNPTSQSECTAEEAYTWSKG--RAIFA 470 (521)
Q Consensus 408 ~~vkptvLIG~S~~~---g-----------~Ft~evv~~Ma~~~erPI-IFaLSNPt~~~Ectpe~A~~wt~G--~aifA 470 (521)
++ .|++|=+.+.+ | ...+++++.+.+++.+-+ |+-.|||. ..+..-+++++.+ +-.|.
T Consensus 78 ~d--aDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv---d~~t~~~~~~~~~~p~~~ig 152 (333)
T 5mdh_A 78 KD--LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA---NTNCLTASKSAPSIPKENFS 152 (333)
T ss_dssp TT--CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH---HHHHHHHHHTCTTSCGGGEE
T ss_pred CC--CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch---HHHHHHHHHHcCCCCcCEEE
Confidence 87 99988554433 2 134678888988888874 88899995 4555555555422 12355
Q ss_pred cCC
Q 009982 471 SGS 473 (521)
Q Consensus 471 sGS 473 (521)
+|.
T Consensus 153 ~~t 155 (333)
T 5mdh_A 153 CLT 155 (333)
T ss_dssp ECC
T ss_pred EEE
Confidence 554
No 188
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.38 E-value=2.5 Score=38.77 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=60.6
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhcc-ccCCCCCH
Q 009982 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWAH-EHEPVNNL 403 (521)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa~-~~~~~~~L 403 (521)
.+|++.+|+|.|| |-.|..+++.|++. | .++++++++. ++.+.+..... .+.. |.. .++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~R~~----~~~~~~~~~~~~~~~~~Dl~--~~~ 78 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK-----G-------HEPVAMVRNE----EQGPELRERGASDIVVANLE--EDF 78 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSG----GGHHHHHHTTCSEEEECCTT--SCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC-----C-------CeEEEEECCh----HHHHHHHhCCCceEEEcccH--HHH
Confidence 4578899999998 88888888888752 5 3688888742 11111111111 1111 211 567
Q ss_pred HHHhcccCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcCC
Q 009982 404 LDAVKVIKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.+++++ +|++|=+.+.... -+..+++++.+..-+-|||.=|-
T Consensus 79 ~~~~~~--~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 79 SHAFAS--IDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp GGGGTT--CSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred HHHHcC--CCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 777875 9999977765421 14567888876666778886553
No 189
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=83.28 E-value=0.61 Score=51.41 Aligned_cols=38 Identities=26% Similarity=0.439 Sum_probs=33.8
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|++.||+|+|||..|..+|+.|+.+ |+ ++|.++|.+
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~a-----GV------G~ItLvD~D 360 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAW-----GV------RKITFVDNG 360 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTT-----TC------CEEEEECCS
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHc-----CC------CEEEEECCC
Confidence 478899999999999999999999875 75 789999976
No 190
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=83.28 E-value=3.5 Score=39.85 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=63.4
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh----chhhcc-ccCCCCC
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNN 402 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~----k~~fa~-~~~~~~~ 402 (521)
+...||+|.|| |-.|..+++.|++. |- .-+++.+|+...- .....+... +..+.. +..+..+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~-----~~~v~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~Dl~d~~~ 89 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS-----YE-----TYKIINFDALTYS--GNLNNVKSIQDHPNYYFVKGEIQNGEL 89 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH-----CT-----TEEEEEEECCCTT--CCGGGGTTTTTCTTEEEEECCTTCHHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh-----CC-----CcEEEEEeccccc--cchhhhhhhccCCCeEEEEcCCCCHHH
Confidence 45678999998 99999999888764 52 2367777775321 111111111 111111 2222346
Q ss_pred HHHHhcccCCcEEEEccCCCCCC----------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 403 LLDAVKVIKPTILIGSSGVGRTF----------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~F----------------t~evv~~Ma~~~erPIIFaLS 446 (521)
+.++++..++|++|=+.+....- |..+++++.+..-+-+||.=|
T Consensus 90 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 90 LEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp HHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 88888888899999887654211 356788887766666888543
No 191
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=82.86 E-value=4.3 Score=41.45 Aligned_cols=108 Identities=12% Similarity=0.068 Sum_probs=72.6
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+.. .. + .... .......+|.|
T Consensus 155 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~-----G~-------~V~~~d~~~--~~---~---~~~~---~g~~~~~~l~e 211 (352)
T 3gg9_A 155 GRVLKGQTLGIFGYGKIGQLVAGYGRAF-----GM-------NVLVWGREN--SK---E---RARA---DGFAVAESKDA 211 (352)
T ss_dssp BCCCTTCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSHH--HH---H---HHHH---TTCEECSSHHH
T ss_pred CccCCCCEEEEEeECHHHHHHHHHHHhC-----CC-------EEEEECCCC--CH---H---HHHh---cCceEeCCHHH
Confidence 5678999999999999999999988542 64 688888642 00 0 0000 00112358999
Q ss_pred HhcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009982 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (521)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (521)
+++. .|+++=.- ...+.++++.++.|. +..++.=.|+-..--|-.-.+|++
T Consensus 212 ll~~--aDiV~l~~Plt~~t~~li~~~~l~~mk---~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 212 LFEQ--SDVLSVHLRLNDETRSIITVADLTRMK---PTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp HHHH--CSEEEECCCCSTTTTTCBCHHHHTTSC---TTCEEEECSCGGGBCTTHHHHHHH
T ss_pred HHhh--CCEEEEeccCcHHHHHhhCHHHHhhCC---CCcEEEECCCchhhcHHHHHHHHH
Confidence 9987 89888532 234689999998886 678998888744334444445554
No 192
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.76 E-value=1.4 Score=45.80 Aligned_cols=120 Identities=24% Similarity=0.264 Sum_probs=66.7
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
.++.+||+|+|.|.+|+++|++|.+. | .++...|.+-.......+.|.....++.... .-.+.+
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~-----G-------~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~----~~~~~~ 69 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKL-----G-------AIVTVNDGKPFDENPTAQSLLEEGIKVVCGS----HPLELL 69 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHT-----T-------CEEEEEESSCGGGCHHHHHHHHTTCEEEESC----CCGGGG
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhC-----C-------CEEEEEeCCcccCChHHHHHHhCCCEEEECC----ChHHhh
Confidence 46789999999999999998888663 6 4688899853110000001111111111010 111112
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEEe
Q 009982 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKVF 485 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~~ 485 (521)
+. .+|.+|=.++.+ .=++++.++... .-||+= | +|-++...+++.|-.||| ||||-
T Consensus 70 ~~-~~d~vv~spgi~-~~~p~~~~a~~~--gi~v~~---------~--~e~~~~~~~~~~IaVTGT-------nGKTT 125 (451)
T 3lk7_A 70 DE-DFCYMIKNPGIP-YNNPMVKKALEK--QIPVLT---------E--VELAYLVSESQLIGITGS-------NGKTT 125 (451)
T ss_dssp GS-CEEEEEECTTSC-TTSHHHHHHHHT--TCCEEC---------H--HHHHHHHCCSEEEEEECS-------SCHHH
T ss_pred cC-CCCEEEECCcCC-CCChhHHHHHHC--CCcEEe---------H--HHHHHHhcCCCEEEEECC-------CCHHH
Confidence 21 168887555554 346777766543 456651 1 233444556788888997 67654
No 193
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=82.53 E-value=1 Score=39.23 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=27.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...+|+|+|+|..|..+++.|... | .++.++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~-----g-------~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQR-----G-------QNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 356899999999999999988652 4 468889885
No 194
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.29 E-value=1.1 Score=41.80 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=54.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
...||.|+|+|..|..+|+.+... |. +++++|++- ++ ... ++...-...++.++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~-----g~-------~V~~~~r~~----~~---~~~----~~~~g~~~~~~~~~~~~ 83 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS-----GF-------KVVVGSRNP----KR---TAR----LFPSAAQVTFQEEAVSS 83 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSH----HH---HHH----HSBTTSEEEEHHHHTTS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHH----HHHcCCceecHHHHHhC
Confidence 446899999999999999988653 42 588888741 11 111 11110001267788775
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS 450 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~ 450 (521)
+|++|=+. .+. ..+++++ ++...+..+|.-+||+.+
T Consensus 84 --~DvVi~av-~~~-~~~~v~~-l~~~~~~~~vv~~s~g~~ 119 (215)
T 2vns_A 84 --PEVIFVAV-FRE-HYSSLCS-LSDQLAGKILVDVSNPTE 119 (215)
T ss_dssp --CSEEEECS-CGG-GSGGGGG-GHHHHTTCEEEECCCCCH
T ss_pred --CCEEEECC-ChH-HHHHHHH-HHHhcCCCEEEEeCCCcc
Confidence 88887433 232 3445553 332225668888888763
No 195
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=82.28 E-value=5.8 Score=40.19 Aligned_cols=120 Identities=13% Similarity=0.061 Sum_probs=78.9
Q ss_pred CCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHHh
Q 009982 299 THLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQ 357 (521)
Q Consensus 299 ~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~ 357 (521)
.|+|.|---- .+|=-+++.+|+..|- .+..|.+.+|.|+|.|..|..+|+.+...
T Consensus 112 gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~---- 187 (335)
T 2g76_A 112 GILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSF---- 187 (335)
T ss_dssp TCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHHHHHTT----
T ss_pred CeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHHHHHHC----
Confidence 5666664322 2344567777777664 25679999999999999999999988532
Q ss_pred cCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhcccCCcEEEEccC----CCCCCCHHHHHH
Q 009982 358 TKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVIKPTILIGSSG----VGRTFTKEVIEA 432 (521)
Q Consensus 358 ~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~vkptvLIG~S~----~~g~Ft~evv~~ 432 (521)
|+ +++.+|+.. . . . .+.. .-...+|.|+++. .|+++=.-- ..++|+++.++.
T Consensus 188 -G~-------~V~~~d~~~----~--~---~----~~~~~g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l~~ 244 (335)
T 2g76_A 188 -GM-------KTIGYDPII----S--P---E----VSASFGVQQLPLEEIWPL--CDFITVHTPLLPSTTGLLNDNTFAQ 244 (335)
T ss_dssp -TC-------EEEEECSSS----C--H---H----HHHHTTCEECCHHHHGGG--CSEEEECCCCCTTTTTSBCHHHHTT
T ss_pred -CC-------EEEEECCCc----c--h---h----hhhhcCceeCCHHHHHhc--CCEEEEecCCCHHHHHhhCHHHHhh
Confidence 53 588888641 1 0 0 1111 0011479999987 899885421 235788888888
Q ss_pred HHcCCCCcEEEEcCCC
Q 009982 433 MASFNEKPLILALSNP 448 (521)
Q Consensus 433 Ma~~~erPIIFaLSNP 448 (521)
|. +..++.=.|.-
T Consensus 245 mk---~gailIN~arg 257 (335)
T 2g76_A 245 CK---KGVRVVNCARG 257 (335)
T ss_dssp SC---TTEEEEECSCT
T ss_pred CC---CCcEEEECCCc
Confidence 85 57788878873
No 196
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.12 E-value=1.4 Score=43.17 Aligned_cols=93 Identities=19% Similarity=0.270 Sum_probs=54.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-----------ccc-CC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----------HEH-EP 399 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-----------~~~-~~ 399 (521)
.||.|+|+|..|..+|..|... | .+++++|+..- + +...++... ... ..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-----g-------~~V~~~~r~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-----G-------QSVLAWDIDAQ----R---IKEIQDRGAIIAEGPGLAGTAHPDLL 65 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSCHH----H---HHHHHHHTSEEEESSSCCEEECCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhC-----C-------CEEEEEeCCHH----H---HHHHHhcCCeEEecccccccccccee
Confidence 5899999999999999988653 4 35888887421 0 111110000 000 01
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCC
Q 009982 400 VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSN 447 (521)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSN 447 (521)
..++.++++. +|++|=+.. . ...+++++.++.. .+..+|+.+.|
T Consensus 66 ~~~~~~~~~~--~D~vi~~v~-~-~~~~~~~~~l~~~l~~~~~vv~~~~ 110 (359)
T 1bg6_A 66 TSDIGLAVKD--ADVILIVVP-A-IHHASIAANIASYISEGQLIILNPG 110 (359)
T ss_dssp ESCHHHHHTT--CSEEEECSC-G-GGHHHHHHHHGGGCCTTCEEEESSC
T ss_pred cCCHHHHHhc--CCEEEEeCC-c-hHHHHHHHHHHHhCCCCCEEEEcCC
Confidence 2478888875 887773332 2 3458888888654 33556666644
No 197
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.06 E-value=1.8 Score=42.13 Aligned_cols=91 Identities=13% Similarity=0.174 Sum_probs=52.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|+|..|..+|..+... |. +++++|+.. ++ +...++. ......++.|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-----g~-------~V~~~~~~~----~~---~~~~~~~---g~~~~~~~~~~~~~-- 86 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-----GH-------TVTVWNRTA----EK---CDLFIQE---GARLGRTPAEVVST-- 86 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSG----GG---GHHHHHT---TCEECSCHHHHHHH--
T ss_pred CeEEEEcccHHHHHHHHHHHhC-----CC-------EEEEEeCCH----HH---HHHHHHc---CCEEcCCHHHHHhc--
Confidence 6899999999999999988653 53 578888641 11 1111110 00112467777775
Q ss_pred CcEEEEccCCCCCCCHHHHHHH----HcCCCCcEEEEcCC
Q 009982 412 PTILIGSSGVGRTFTKEVIEAM----ASFNEKPLILALSN 447 (521)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~M----a~~~erPIIFaLSN 447 (521)
+|++|=+.. ...-.++++... ....+..+|+-+||
T Consensus 87 ~DvVi~av~-~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~ 125 (316)
T 2uyy_A 87 CDITFACVS-DPKAAKDLVLGPSGVLQGIRPGKCYVDMST 125 (316)
T ss_dssp CSEEEECCS-SHHHHHHHHHSTTCGGGGCCTTCEEEECSC
T ss_pred CCEEEEeCC-CHHHHHHHHcCchhHhhcCCCCCEEEECCC
Confidence 787763322 112344555432 12335567777777
No 198
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=81.94 E-value=1.5 Score=43.72 Aligned_cols=35 Identities=20% Similarity=0.479 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..||||+|+|.||+..|..|.+. |- .-+|.++|++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~-----~~-----~~~Vtlie~~ 36 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLA-----DP-----SIEVTLIEPN 36 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhc-----Cc-----CCeEEEEeCC
Confidence 46899999999999999998654 31 1268888875
No 199
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.83 E-value=1.3 Score=41.81 Aligned_cols=96 Identities=13% Similarity=0.208 Sum_probs=57.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
..||+|.|||-.|..+++.|++. | .+++.+++.- ..+.+.-..+.-+..+..++.+++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~-----g-------~~V~~~~r~~-------~~~~~~~~~~~~Dl~d~~~~~~~~~~- 62 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ-----G-------HEVTGLRRSA-------QPMPAGVQTLIADVTRPDTLASIVHL- 62 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECTT-------SCCCTTCCEEECCTTCGGGCTTGGGG-
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCCc-------cccccCCceEEccCCChHHHHHhhcC-
Confidence 46899999999999998888663 5 3678887641 11221111111122223456666664
Q ss_pred CCcEEEEccCCCC-----------CCCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGR-----------TFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g-----------~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++|++|=+.+... ..|..+++++.+..-+.+||.=|
T Consensus 63 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 6999997654311 12567778777655566887544
No 200
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=81.66 E-value=1.1 Score=44.44 Aligned_cols=100 Identities=19% Similarity=0.206 Sum_probs=60.0
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH 395 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~ 395 (521)
.|++.+++-.| +.+++|+|||.+|.+++..|.+. | .+|+++++. .++.+.+. .+.-
T Consensus 107 ~Gf~~~L~~~~----~k~vlvlGaGGaaraia~~L~~~-----G-------~~v~V~nRt----~~ka~~la----~~~~ 162 (269)
T 3phh_A 107 LGFYLSLKQKN----YQNALILGAGGSAKALACELKKQ-----G-------LQVSVLNRS----SRGLDFFQ----RLGC 162 (269)
T ss_dssp HHHHHHCC-------CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS----CTTHHHHH----HHTC
T ss_pred HHHHHHHHHcC----CCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC----HHHHHHHH----HCCC
Confidence 45666665433 78999999999999999888763 3 478888874 33322222 1110
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCC----CCCCHHHHH-HHHcCCCCcEEEEcC-CC
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGVG----RTFTKEVIE-AMASFNEKPLILALS-NP 448 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~----g~Ft~evv~-~Ma~~~erPIIFaLS-NP 448 (521)
......+| . ++|++|-++..+ -.+.++.+. .+. +..+|+=++ ||
T Consensus 163 ~~~~~~~l----~--~~DiVInaTp~Gm~~~~~l~~~~l~~~l~---~~~~v~D~vY~P 212 (269)
T 3phh_A 163 DCFMEPPK----S--AFDLIINATSASLHNELPLNKEVLKGYFK---EGKLAYDLAYGF 212 (269)
T ss_dssp EEESSCCS----S--CCSEEEECCTTCCCCSCSSCHHHHHHHHH---HCSEEEESCCSS
T ss_pred eEecHHHh----c--cCCEEEEcccCCCCCCCCCChHHHHhhCC---CCCEEEEeCCCC
Confidence 10111222 2 599999776544 147888665 454 466888665 44
No 201
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=81.36 E-value=1.2 Score=44.09 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-----G~-------~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-----GY-------ALQVWNRT 63 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 456999999999999999998763 53 57777763
No 202
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=81.33 E-value=1.6 Score=42.90 Aligned_cols=94 Identities=14% Similarity=0.144 Sum_probs=52.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHH
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDA 406 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~ea 406 (521)
.+...||.|+|+|..|.++|..|... |. +++++|+.- + .+. .++.. .....++.|+
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~~----~---~~~----~~~~~g~~~~~~~~e~ 62 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQ-----GK-------RVAIWNRSP----G---KAA----ALVAAGAHLCESVKAA 62 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----H---HHH----HHHHHTCEECSSHHHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHH----HHHHCCCeecCCHHHH
Confidence 34567899999999999999998763 53 577777631 1 111 11111 1123567777
Q ss_pred hcccCCcEEEEccCCCCCCCHHHHH--HHHcCCCCcEEEEcCC
Q 009982 407 VKVIKPTILIGSSGVGRTFTKEVIE--AMASFNEKPLILALSN 447 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~Ft~evv~--~Ma~~~erPIIFaLSN 447 (521)
++. +|++|=+ .....-.++++. .+....+..||.-+|+
T Consensus 63 ~~~--aDvVi~~-vp~~~~~~~v~~~~~l~~~~~g~ivid~st 102 (306)
T 3l6d_A 63 LSA--SPATIFV-LLDNHATHEVLGMPGVARALAHRTIVDYTT 102 (306)
T ss_dssp HHH--SSEEEEC-CSSHHHHHHHHTSTTHHHHTTTCEEEECCC
T ss_pred Hhc--CCEEEEE-eCCHHHHHHHhcccchhhccCCCEEEECCC
Confidence 776 6766632 211122333333 2222335566666664
No 203
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=81.21 E-value=2.2 Score=44.97 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=60.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-----cccCCCCCHHHHh
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-----HEHEPVNNLLDAV 407 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-----~~~~~~~~L~eav 407 (521)
||.|+|+|..|..+|..|.+. |. +++++|+.. ++ .....+.+- .......++.|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~g~~~~~~~i~~~~~~~e~v 63 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-----GF-------KVAVFNRTY----SK---SEEFMKANASAPFAGNLKAFETMEAFA 63 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSH----HH---HHHHHHHTTTSTTGGGEEECSCHHHHH
T ss_pred EEEEEChHHHHHHHHHHHHHC-----CC-------EEEEEeCCH----HH---HHHHHHhcCCCCCCCCeEEECCHHHHH
Confidence 699999999999999988753 53 578888741 11 111111100 0011235788888
Q ss_pred ccc-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009982 408 KVI-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (521)
Q Consensus 408 ~~v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (521)
+.. ++|++| ++...+...+++++.+... .+..||.-+||-.
T Consensus 64 ~~l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~ 106 (478)
T 1pgj_A 64 ASLKKPRKAL-ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAH 106 (478)
T ss_dssp HHBCSSCEEE-ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCC
T ss_pred hcccCCCEEE-EecCChHHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 743 488887 4444444567788777543 3456888888864
No 204
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=81.05 E-value=1.2 Score=40.62 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=58.9
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh-----chhhcc-ccCCCCCHH
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-----KKPWAH-EHEPVNNLL 404 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~-----k~~fa~-~~~~~~~L~ 404 (521)
++|+|.|| |-.|..+++.|++. .| -++++++++. + ..+... +..+.. +..+..++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~----~g-------~~V~~~~r~~----~--~~~~~~~~~~~~~~~~~~D~~d~~~~~ 68 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTY----TD-------MHITLYGRQL----K--TRIPPEIIDHERVTVIEGSFQNPGXLE 68 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHH----CC-------CEEEEEESSH----H--HHSCHHHHTSTTEEEEECCTTCHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhc----CC-------ceEEEEecCc----c--ccchhhccCCCceEEEECCCCCHHHHH
Confidence 35999996 88888888888732 35 3688887751 1 012111 111111 222224677
Q ss_pred HHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 405 DAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++++. +|++|=+.+..+.-++.+++.|.+..-+-|||.=|
T Consensus 69 ~~~~~--~d~vv~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs 108 (221)
T 3r6d_A 69 QAVTN--AEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSM 108 (221)
T ss_dssp HHHTT--CSEEEESCCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHcC--CCEEEEcCCCCChhHHHHHHHHHhcCCCeEEEEee
Confidence 88875 89999777643323788999998766667887543
No 205
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.01 E-value=2.4 Score=40.83 Aligned_cols=91 Identities=13% Similarity=0.202 Sum_probs=57.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
.||.|+|+ |..|..+|+.+... | .+++++|+.- +.+...+. + .-...++.++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-----g-------~~V~~~~r~~-------~~~~~~~~-~---g~~~~~~~~~~~~- 67 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-----A-------HHLAAIEIAP-------EGRDRLQG-M---GIPLTDGDGWIDE- 67 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-----S-------SEEEEECCSH-------HHHHHHHH-T---TCCCCCSSGGGGT-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----C-------CEEEEEECCH-------HHHHHHHh-c---CCCcCCHHHHhcC-
Confidence 48999999 99999999988653 5 2688888631 11111111 1 0111356777775
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (521)
+|++|= +..+.. .+++++.+... .+..||.-+|+..
T Consensus 68 -aDvVi~-av~~~~-~~~v~~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 68 -ADVVVL-ALPDNI-IEKVAEDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp -CSEEEE-CSCHHH-HHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred -CCEEEE-cCCchH-HHHHHHHHHHhCCCCCEEEECCCCc
Confidence 898883 333333 68888888654 3456777788854
No 206
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=80.80 E-value=7.6 Score=39.51 Aligned_cols=169 Identities=16% Similarity=0.130 Sum_probs=99.9
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHHh------------------------C-CCcccceEEEeCcchHHHHHHHH
Q 009982 298 TTHLVFNDDIQ---GTASVVLAGVVAALKLI------------------------G-GTLAEHRFLFLGAGEAGTGIAEL 349 (521)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~~------------------------g-~~L~d~riv~~GAGsAg~Gia~l 349 (521)
..|.|.|---- .+|=-+++.+|+..|-. | ..|.+.++.|+|.|..|..+|+.
T Consensus 107 ~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~ 186 (347)
T 1mx3_A 107 LGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALR 186 (347)
T ss_dssp TTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHH
Confidence 45666664332 33444777788776621 2 46889999999999999999998
Q ss_pred HHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCC
Q 009982 350 IALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTF 425 (521)
Q Consensus 350 l~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~F 425 (521)
+... |+ +++.+|++- . +.. .+.+ ......+|.|+++. .|+++=.- ...+++
T Consensus 187 l~~~-----G~-------~V~~~d~~~----~--~~~---~~~~--g~~~~~~l~ell~~--aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 187 AKAF-----GF-------NVLFYDPYL----S--DGV---ERAL--GLQRVSTLQDLLFH--SDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp HHTT-----TC-------EEEEECTTS----C--TTH---HHHH--TCEECSSHHHHHHH--CSEEEECCCCCTTCTTSB
T ss_pred HHHC-----CC-------EEEEECCCc----c--hhh---Hhhc--CCeecCCHHHHHhc--CCEEEEcCCCCHHHHHHh
Confidence 8542 54 588888641 1 101 0111 01123479999987 89887542 223578
Q ss_pred CHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEe-----cCCCCCcceeCCEEeccccccceeechhhh
Q 009982 426 TKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFA-----SGSPFDPFEYNGKVFVPGQANNAYIFPGFG 500 (521)
Q Consensus 426 t~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifA-----sGSPf~pv~~~Gr~~~p~Q~NN~~iFPGig 500 (521)
+++.++.|. +..++.=.|+=..--|..-.+|++ +|+.--| ..-|+++ .+.. --..+|+.+-|=++
T Consensus 242 ~~~~l~~mk---~gailIN~arg~~vd~~aL~~aL~--~g~i~gA~lDV~~~EP~~~---~~~~--L~~~~nvi~tPHia 311 (347)
T 1mx3_A 242 NDFTVKQMR---QGAFLVNTARGGLVDEKALAQALK--EGRIRGAALDVHESEPFSF---SQGP--LKDAPNLICTPHAA 311 (347)
T ss_dssp SHHHHTTSC---TTEEEEECSCTTSBCHHHHHHHHH--HTSEEEEEESCCSSSSCCT---TSST--TTTCSSEEECSSCT
T ss_pred HHHHHhcCC---CCCEEEECCCChHHhHHHHHHHHH--hCCCcEEEEeecccCCCCC---CCch--HHhCCCEEEEchHH
Confidence 888888885 567888888743223322334443 3543322 2333221 0100 12478999999776
Q ss_pred H
Q 009982 501 L 501 (521)
Q Consensus 501 l 501 (521)
-
T Consensus 312 ~ 312 (347)
T 1mx3_A 312 W 312 (347)
T ss_dssp T
T ss_pred H
Confidence 3
No 207
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=80.79 E-value=6.2 Score=38.82 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=27.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.++|..|.+. |. ++++++|+.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-----G~------~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-----GA------IDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SC------CEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC------CeEEEEcCC
Confidence 6899999999999999999775 52 478888874
No 208
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=80.66 E-value=1.6 Score=43.20 Aligned_cols=102 Identities=13% Similarity=0.155 Sum_probs=58.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh--chhhccccCCCCCHHHHhc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAHEHEPVNNLLDAVK 408 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~--k~~fa~~~~~~~~L~eav~ 408 (521)
..||.|+|+|+.|..+|..|.+. | .++.++|+.--+..-+...+... ...+........++.+ ++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~-----g-------~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA-----G-------EAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT-----T-------CCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-----C-------CEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cC
Confidence 46899999999999999998763 4 35888887311100000001000 0000000011235665 44
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009982 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (521)
. +|++| ++... ...+++++.++.. .+..+|..++|..
T Consensus 70 ~--~D~Vi-lavk~-~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 70 E--QDVVI-VAVKA-PALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp C--CSEEE-ECCCH-HHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred C--CCEEE-EeCCc-hhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 4 88887 44433 4577888888754 3567888999984
No 209
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.61 E-value=1.4 Score=42.62 Aligned_cols=32 Identities=19% Similarity=0.300 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-----G~-------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-----GY-------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhC-----CC-------eEEEEcCC
Confidence 5899999999999999998763 53 68888874
No 210
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=80.49 E-value=4 Score=41.20 Aligned_cols=124 Identities=14% Similarity=0.067 Sum_probs=80.1
Q ss_pred CCCceeccCC---CchHHHHHHHHHHHHHH--------------------hCCCcccceEEEeCcchHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDI---QGTASVVLAGVVAALKL--------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEI 354 (521)
Q Consensus 298 ~~~~~FnDDi---QGTaaV~LAgll~Alk~--------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~ 354 (521)
..|+|.|--- +.+|=-+++-+|+..|- .|..|.+.++.|+|.|..|..+|+.+..
T Consensus 89 ~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~-- 166 (330)
T 4e5n_A 89 RGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQG-- 166 (330)
T ss_dssp TTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTT--
T ss_pred cCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHHHHHHHH--
Confidence 3555555422 23344567777766542 2456889999999999999999998743
Q ss_pred HHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHH
Q 009982 355 SKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVI 430 (521)
Q Consensus 355 ~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv 430 (521)
.|+ +++.+|+... . ....+ .+ .-...+|.|+++. .|+++=.- ...+.++++.+
T Consensus 167 ---~G~-------~V~~~d~~~~----~---~~~~~-~~---g~~~~~l~ell~~--aDvV~l~~P~t~~t~~li~~~~l 223 (330)
T 4e5n_A 167 ---WGA-------TLQYHEAKAL----D---TQTEQ-RL---GLRQVACSELFAS--SDFILLALPLNADTLHLVNAELL 223 (330)
T ss_dssp ---SCC-------EEEEECSSCC----C---HHHHH-HH---TEEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHH
T ss_pred ---CCC-------EEEEECCCCC----c---HhHHH-hc---CceeCCHHHHHhh--CCEEEEcCCCCHHHHHHhCHHHH
Confidence 254 5888887531 1 10111 11 0012379999987 89888542 12468999999
Q ss_pred HHHHcCCCCcEEEEcCCCC
Q 009982 431 EAMASFNEKPLILALSNPT 449 (521)
Q Consensus 431 ~~Ma~~~erPIIFaLSNPt 449 (521)
+.|. +..+|.=.|+-.
T Consensus 224 ~~mk---~gailIN~arg~ 239 (330)
T 4e5n_A 224 ALVR---PGALLVNPCRGS 239 (330)
T ss_dssp TTSC---TTEEEEECSCGG
T ss_pred hhCC---CCcEEEECCCCc
Confidence 8885 677888888743
No 211
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=80.47 E-value=3.3 Score=43.50 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=61.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (521)
..||.|+|+|..|..+|..|... |. ++.++|+. .+ .+....+.+.. ......++.|+++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~-----G~-------~V~v~dr~----~~---~~~~l~~~~~~~gi~~~~s~~e~v~~ 65 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR-----GY-------TVAIYNRT----TS---KTEEVFKEHQDKNLVFTKTLEEFVGS 65 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS----HH---HHHHHHHHTTTSCEEECSSHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC-----CC-------EEEEEcCC----HH---HHHHHHHhCcCCCeEEeCCHHHHHhh
Confidence 35899999999999999988753 53 57778763 11 12121111100 01123578888875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
. ++|++| ++.+.+...+++++.+...- +..||.-+||-.
T Consensus 66 l~~aDvVi-lavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~ 106 (474)
T 2iz1_A 66 LEKPRRIM-LMVQAGAATDATIKSLLPLLDIGDILIDGGNTH 106 (474)
T ss_dssp BCSSCEEE-ECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EEccCchHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence 3 588877 44444456778888776543 456888888864
No 212
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.46 E-value=1.8 Score=41.68 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|..+|..+... | .+++++|+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-----G-------CSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 4899999999999999998763 5 367777774
No 213
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.21 E-value=2.2 Score=42.37 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.++|..++.. |. .+++++|+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-----G~------~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-----NA------ARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 5899999999999999998763 51 368888875
No 214
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=79.96 E-value=4.6 Score=40.15 Aligned_cols=93 Identities=16% Similarity=0.170 Sum_probs=53.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH-Hhccc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD-AVKVI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e-av~~v 410 (521)
.||.|+|+|..|..+|..+... |. ..+++++|++- +.+...++.-+. .....++.| +++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-----G~-----~~~V~~~dr~~-------~~~~~a~~~G~~-~~~~~~~~~~~~~~- 94 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGII-DEGTTSIAKVEDFS- 94 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSC-SEEESCTTGGGGGC-
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-----CC-----CCEEEEEECCH-------HHHHHHHHCCCc-chhcCCHHHHhhcc-
Confidence 7999999999999999988764 64 14788888741 111111100000 001245666 6765
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLS 446 (521)
+|++| ++.+.. -.+++++.+..+ .+.-||.-.+
T Consensus 95 -aDvVi-lavp~~-~~~~vl~~l~~~l~~~~iv~d~~ 128 (314)
T 3ggo_A 95 -PDFVM-LSSPVR-TFREIAKKLSYILSEDATVTDQG 128 (314)
T ss_dssp -CSEEE-ECSCGG-GHHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCEEE-EeCCHH-HHHHHHHHHhhccCCCcEEEECC
Confidence 77777 444443 346677766543 3455665444
No 215
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=79.92 E-value=1.5 Score=42.84 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=25.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-||+|+|||.||+..|-.|.+. |+ ++.++|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~-----G~-------~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH-----GI-------KVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEecC
Confidence 4899999999999999888663 75 46677653
No 216
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.86 E-value=3.9 Score=38.95 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=56.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc-cc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK-VI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~-~v 410 (521)
.||.|+|+|..|..+|..+... |. ..+++++|++. +.+...++.-... ....++.++++ .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~-----g~-----~~~V~~~d~~~-------~~~~~~~~~g~~~-~~~~~~~~~~~~~- 62 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRS-----GF-----KGKIYGYDINP-------ESISKAVDLGIID-EGTTSIAKVEDFS- 62 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCH-------HHHHHHHHTTSCS-EEESCGGGGGGTC-
T ss_pred cEEEEEecCHHHHHHHHHHHhc-----CC-----CcEEEEEeCCH-------HHHHHHHHCCCcc-cccCCHHHHhcCC-
Confidence 3799999999999999988653 53 13688888741 1111111000000 01246777776 5
Q ss_pred CCcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSNPT 449 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSNPt 449 (521)
+|++| ++..+ ..+.++++.+.. ..+..+|.-+||-.
T Consensus 63 -aDvVi-lavp~-~~~~~v~~~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 63 -PDFVM-LSSPV-RTFREIAKKLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp -CSEEE-ECSCH-HHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred -CCEEE-EcCCH-HHHHHHHHHHHhhCCCCcEEEECCCCc
Confidence 88887 44433 356677777654 23556777777743
No 217
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.67 E-value=2.5 Score=38.19 Aligned_cols=97 Identities=10% Similarity=0.141 Sum_probs=58.3
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v 410 (521)
.||+|.|| |-.|..+++.|++. | .++++++++. ++.+.+...-..+.-+..+..++.+++++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 67 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNR-----G-------FEVTAVVRHP----EKIKIENEHLKVKKADVSSLDEVCEVCKG- 67 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTT-----T-------CEEEEECSCG----GGCCCCCTTEEEECCCTTCHHHHHHHHTT-
T ss_pred CEEEEEcCCchHHHHHHHHHHHC-----C-------CEEEEEEcCc----ccchhccCceEEEEecCCCHHHHHHHhcC-
Confidence 58999996 77888888777652 4 4688888852 11111211111111122233467888886
Q ss_pred CCcEEEEccCCCC----------CCCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGR----------TFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g----------~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+... ..+..+++++.+..-+.+||.=|
T Consensus 68 -~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 68 -ADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp -CSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred -CCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999998765431 12556888888776667888544
No 218
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.53 E-value=3.7 Score=43.81 Aligned_cols=98 Identities=15% Similarity=0.198 Sum_probs=62.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc--CCCCCHHHHhcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH--EPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~--~~~~~L~eav~~ 409 (521)
.+|.|+|+|..|.++|..|... |. +++++|+.- + ......+.-+... ....++.|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~-----G~-------~V~v~dr~~----~---~~~~l~~~g~~g~~i~~~~s~~e~v~~ 65 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----S---KVDDFLANEAKGTKVVGAQSLKEMVSK 65 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----H---HHHHHHHTTTTTSSCEECSSHHHHHHT
T ss_pred CEEEEEChhHHHHHHHHHHHHC-----CC-------EEEEEeCCH----H---HHHHHHhcccCCCceeccCCHHHHHhh
Confidence 5799999999999999998763 53 578888631 1 1111111111110 113688898875
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009982 410 I-KPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPT 449 (521)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (521)
+ +||++| ++.+.+..++++++.+..+ .+..||.-.||-.
T Consensus 66 l~~aDvVi-l~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 66 LKKPRRII-LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp BCSSCEEE-ECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EecCChHHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence 4 488777 4444445677888887654 4567888888854
No 219
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=79.50 E-value=2.2 Score=42.95 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=65.4
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCC--CCCHHHHhcc
Q 009982 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEP--VNNLLDAVKV 409 (521)
Q Consensus 333 riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~--~~~L~eav~~ 409 (521)
||.|+| +|..|..+|-+|... .++ ...+.++|..-. .++..-+|.+. ++-..... ..+..+++++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~----~~~-----~~el~L~Di~~~-~~G~a~Dl~~~--~~~~~v~~~~~~~~~~~~~~ 69 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQ----LPS-----GSELSLYDIAPV-TPGVAVDLSHI--PTAVKIKGFSGEDATPALEG 69 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH----SCT-----TEEEEEECSSTT-HHHHHHHHHTS--CSSEEEEEECSSCCHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHHHhC----CCC-----CceEEEEecCCC-chhHHHHhhCC--CCCceEEEecCCCcHHHhCC
Confidence 799999 899999999877542 133 257999999741 11111112221 11000010 1256788887
Q ss_pred cCCcEEEEccCCC---CC-----------CCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 410 IKPTILIGSSGVG---RT-----------FTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 410 vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
.|+.|=+.+.+ |- +-+++++.+++++.+-+|+-.|||.
T Consensus 70 --aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPv 121 (312)
T 3hhp_A 70 --ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPV 121 (312)
T ss_dssp --CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCH
T ss_pred --CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcc
Confidence 99988665543 21 2256777888899999999999996
No 220
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=79.41 E-value=0.92 Score=44.32 Aligned_cols=101 Identities=14% Similarity=0.095 Sum_probs=60.1
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc---h---hchhhcc-ccCC
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ---H---FKKPWAH-EHEP 399 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~---~---~k~~fa~-~~~~ 399 (521)
+++..+|+|.|| |-.|..|++.|++. | .+++.+++..- ...+.+. . ....+.. +..+
T Consensus 7 ~M~~~~IlVtGatG~iG~~l~~~L~~~-----g-------~~V~~l~R~~~---~~~~~~~~~~~l~~~~v~~~~~Dl~d 71 (346)
T 3i6i_A 7 PSPKGRVLIAGATGFIGQFVATASLDA-----H-------RPTYILARPGP---RSPSKAKIFKALEDKGAIIVYGLINE 71 (346)
T ss_dssp ----CCEEEECTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSC---CCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC---CChhHHHHHHHHHhCCcEEEEeecCC
Confidence 344578999999 99999998888653 4 36888887530 0000010 0 0011111 1122
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCC-CCHHHHHHHHcCC-CCcEEE
Q 009982 400 VNNLLDAVKVIKPTILIGSSGVGRT-FTKEVIEAMASFN-EKPLIL 443 (521)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~-Ft~evv~~Ma~~~-erPIIF 443 (521)
..+|.++++..++|++|=+.+..++ -+..+++++.+.. -+-+|+
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred HHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 3468889986679999988775432 3678899888765 445554
No 221
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=79.03 E-value=6.1 Score=38.23 Aligned_cols=104 Identities=14% Similarity=0.222 Sum_probs=60.0
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh-chhhcc-ccCCCCCHH
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLL 404 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~-k~~fa~-~~~~~~~L~ 404 (521)
.++..+|+|.|| |-.|..+++.|++. | .+++++|+.. ....+.+... +..+.. +..+..++.
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~l~~~~~~~~~~~Dl~d~~~~~ 82 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLER-----G-------DKVVGIDNFA---TGRREHLKDHPNLTFVEGSIADHALVN 82 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCCCTTEEEEECCTTCHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHC-----C-------CEEEEEECCC---ccchhhHhhcCCceEEEEeCCCHHHHH
Confidence 355678999985 88888888877652 4 3688888752 1111112110 111111 222223577
Q ss_pred HHhcccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 405 DAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++++..++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 83 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 137 (333)
T 2q1w_A 83 QLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQT 137 (333)
T ss_dssp HHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 88887789999988775432 1345677776655567888543
No 222
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=78.52 E-value=2.4 Score=40.87 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=26.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.++|..+... | .+++++|+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-----G-------~~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-----G-------FDVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHC-----C-------CeEEEEcCC
Confidence 3799999999999999999775 5 357888874
No 223
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=78.13 E-value=1.4 Score=46.49 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=33.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.|++.||+++|||..|..+|+.|+.+ |+ .+|.++|.+
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~a-----Gv------g~i~ivD~D 73 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMD 73 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHT-----TC------CCEEEEECC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHc-----CC------CEEEEEcCC
Confidence 345789999999999999999999875 75 789999976
No 224
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=77.71 E-value=2.9 Score=39.93 Aligned_cols=30 Identities=20% Similarity=0.324 Sum_probs=24.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEe
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (521)
.||.|+|+|..|..+|..+... |. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARA-----GH-------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHT-----TC-------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhC-----CC-------EEEEEc
Confidence 4899999999999999988653 42 577776
No 225
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=77.65 E-value=1.8 Score=41.60 Aligned_cols=92 Identities=15% Similarity=0.213 Sum_probs=51.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHHHhccc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLDAVKVI 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~eav~~v 410 (521)
.||.|+|+|..|..+|..+... |. +++++|+.. ++ .. .++.. .....++.|+++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~~----~~---~~----~~~~~g~~~~~~~~~~~~~- 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE-----GV-------TVYAFDLME----AN---VA----AVVAQGAQACENNQKVAAA- 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT-----TC-------EEEEECSSH----HH---HH----HHHTTTCEECSSHHHHHHH-
T ss_pred CEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HH----HHHHCCCeecCCHHHHHhC-
Confidence 5899999999999999988652 43 577887631 11 11 11111 0112467777765
Q ss_pred CCcEEEEccCCCCCCCHHHHH---HHHc-CCCCcEEEEcCCCC
Q 009982 411 KPTILIGSSGVGRTFTKEVIE---AMAS-FNEKPLILALSNPT 449 (521)
Q Consensus 411 kptvLIG~S~~~g~Ft~evv~---~Ma~-~~erPIIFaLSNPt 449 (521)
+|++|=+.. ...-.++++. .+.. ..+..+|.-+||-.
T Consensus 61 -~D~vi~~vp-~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 61 -SDIIFTSLP-NAGIVETVMNGPGGVLSACKAGTVIVDMSSVS 101 (301)
T ss_dssp -CSEEEECCS-SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCC
T ss_pred -CCEEEEECC-CHHHHHHHHcCcchHhhcCCCCCEEEECCCCC
Confidence 777774332 1123445553 2222 23455777777643
No 226
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=77.58 E-value=4.6 Score=39.06 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=61.5
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCc---cCCchhchhhcc-ccCCCC
Q 009982 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK---DSLQHFKKPWAH-EHEPVN 401 (521)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~---~~l~~~k~~fa~-~~~~~~ 401 (521)
+++++.+|+|.|| |-.|..+++.|++. | .+++++|+.. .... +.+. ...+.. +..+..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~l~--~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQ-----G-------HEILVIDNFA---TGKREVLPPVA--GLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGG-----T-------CEEEEEECCS---SSCGGGSCSCT--TEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHC-----C-------CEEEEEECCC---ccchhhhhccC--CceEEEeeCCCHH
Confidence 4577889999998 88888888877542 4 3688888741 1110 1110 111111 212223
Q ss_pred CHHHHhcccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++.++++.+++|++|=+.+.... -+..+++++.+..-+.|||.=|
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS 136 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQT 136 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 57778875579999988775432 0345667776555567888544
No 227
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=77.52 E-value=5.2 Score=38.59 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=58.6
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
++++..+|+|.|| |-.|..+++.|++. | -+++.+|+.- .. ..+. .+.-+..+..++.+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~----~~-~~~~----~~~~Dl~d~~~~~~ 73 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQ-----G-------RTVRGFDLRP----SG-TGGE----EVVGSLEDGQALSD 73 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHT-----T-------CCEEEEESSC----CS-SCCS----EEESCTTCHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCC----CC-CCcc----EEecCcCCHHHHHH
Confidence 4577889999998 88999998888753 5 3578887752 11 1111 11112222345778
Q ss_pred HhcccCCcEEEEccCCCCCC--------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 406 AVKVIKPTILIGSSGVGRTF--------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~F--------------t~evv~~Ma~~~erPIIFaLS 446 (521)
+++ ++|++|=+.+....- |..+++++.+..-+.|||.=|
T Consensus 74 ~~~--~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 74 AIM--GVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp HHT--TCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHh--CCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 888 499999877654211 345788888777678998655
No 228
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.29 E-value=1.8 Score=41.17 Aligned_cols=34 Identities=12% Similarity=0.328 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~vie~~~ 36 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-----GL-------SYVILDAEA 36 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-----SC-------CEEEECCSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECCC
Confidence 46899999999999999988652 53 688999864
No 229
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.27 E-value=2 Score=41.68 Aligned_cols=35 Identities=23% Similarity=0.417 Sum_probs=28.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|+|+|||.||+..|..+.+. |. .++.++|+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-----g~------~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-----GI------TDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-----CC------CcEEEEecCC
Confidence 46899999999999999998652 53 2799999875
No 230
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=77.12 E-value=1.3 Score=38.26 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=26.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|+|..|..+|+.|... | .+++++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-----D-------IPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEECC
Confidence 5799999999999999988653 5 368999984
No 231
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.06 E-value=4.1 Score=42.94 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=60.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhch-hhc-cccCCCCCHHHHhcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKK-PWA-HEHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~-~fa-~~~~~~~~L~eav~~ 409 (521)
.||.|+|+|..|..+|..|... |. +++++|+.. ++ +...++ ... .......++.|+++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-----G~-------~V~v~dr~~----~~---~~~l~~~~~~g~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-----GF-------VVCAFNRTV----SK---VDDFLANEAKGTKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSST----HH---HHHHHHTTTTTSSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHC-----CC-------eEEEEeCCH----HH---HHHHHhccccCCCeEEeCCHHHHHhh
Confidence 4799999999999999988763 53 578888631 11 111111 000 001123578888863
Q ss_pred c-CCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 410 I-KPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 410 v-kptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
+ ++|++| ++.+.+...+++++.+..+- +..||+-+||-.
T Consensus 64 l~~aDvVi-laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~ 104 (482)
T 2pgd_A 64 LKKPRRII-LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSE 104 (482)
T ss_dssp BCSSCEEE-ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCC
T ss_pred ccCCCEEE-EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence 2 488877 44444446778887776433 356888888864
No 232
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=76.82 E-value=9.3 Score=38.68 Aligned_cols=83 Identities=18% Similarity=0.338 Sum_probs=47.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-------cCCC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-------HEPV 400 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-------~~~~ 400 (521)
--.+++|+|+|||..|...+.+... .|. ++++.+|+. . .+..+++. ....
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~----~--------~~~~~~~~lGa~~vi~~~~ 267 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKH-----AGA------SKVILSEPS----E--------VRRNLAKELGADHVIDPTK 267 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----H--------HHHHHHHHHTCSEEECTTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----H--------HHHHHHHHcCCCEEEcCCC
Confidence 3457899999999887766555432 364 578877752 1 12222221 0111
Q ss_pred CCHHHHhcc----cCCcEEEEccCCCCCCCHHHHHHH
Q 009982 401 NNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAM 433 (521)
Q Consensus 401 ~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~M 433 (521)
.++.+.|+. -++|++|-+++......+..++.+
T Consensus 268 ~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l 304 (404)
T 3ip1_A 268 ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVI 304 (404)
T ss_dssp SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHH
Confidence 345555543 369999988764322334555555
No 233
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=76.81 E-value=4 Score=40.03 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.5
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+-.||.|+|+|..|.++|..|... |. +++++|+.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN-----GF-------KVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 34446899999999999999999764 53 67888874
No 234
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=76.79 E-value=6.1 Score=40.15 Aligned_cols=92 Identities=22% Similarity=0.352 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHHhCCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch
Q 009982 310 TASVVLAGVVAALKLIGGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH 388 (521)
Q Consensus 310 TaaV~LAgll~Alk~~g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~ 388 (521)
-.-+|-.|++--|+-.+.+|+..++|++|.+. .|.-+|.||.. .|. .+.+|.|+
T Consensus 158 ~~PcTp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~-----~~A-------TVTi~Hs~------------- 212 (303)
T 4b4u_A 158 YGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ-----ANA-------TVTICHSR------------- 212 (303)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHH-----TTC-------EEEEECTT-------------
T ss_pred ccCccHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHh-----cCC-------EEEEecCC-------------
Confidence 34567789999999999999999999999764 57777777654 243 34555432
Q ss_pred hchhhccccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEc
Q 009982 389 FKKPWAHEHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILAL 445 (521)
Q Consensus 389 ~k~~fa~~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaL 445 (521)
..+|.+.++. +|++|...+.++.++.|||+ +.-+|.=.
T Consensus 213 -----------T~dl~~~~~~--ADIvV~A~G~p~~i~~d~vk------~GavVIDV 250 (303)
T 4b4u_A 213 -----------TQNLPELVKQ--ADIIVGAVGKAELIQKDWIK------QGAVVVDA 250 (303)
T ss_dssp -----------CSSHHHHHHT--CSEEEECSCSTTCBCGGGSC------TTCEEEEC
T ss_pred -----------CCCHHHHhhc--CCeEEeccCCCCcccccccc------CCCEEEEe
Confidence 1368888887 99999999999999999996 44466543
No 235
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=76.67 E-value=1.7 Score=48.26 Aligned_cols=37 Identities=30% Similarity=0.429 Sum_probs=33.3
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.||+++|+|..|.-+|+.|+.+ |+ .+|.++|.+
T Consensus 14 kL~~s~VlVVGaGGLGsevak~La~a-----GV------G~ItlvD~D 50 (640)
T 1y8q_B 14 AVAGGRVLVVGAGGIGCELLKNLVLT-----GF------SHIDLIDLD 50 (640)
T ss_dssp HHHHCEEEEECCSHHHHHHHHHHHHH-----TC------CEEEEEECC
T ss_pred HHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 57789999999999999999999876 76 689999987
No 236
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=76.43 E-value=1.2 Score=41.04 Aligned_cols=95 Identities=14% Similarity=0.140 Sum_probs=53.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh-chhhcc-ccCCCCCHHHH-hcc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF-KKPWAH-EHEPVNNLLDA-VKV 409 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~-k~~fa~-~~~~~~~L~ea-v~~ 409 (521)
||+|+|+|..|..+|+.|.+. | .++.++|++ .++-+.+... ...+.. +......|.++ ++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-----g-------~~v~vid~~----~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~- 64 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-----K-------YGVVIINKD----RELCEEFAKKLKATIIHGDGSHKEILRDAEVS- 64 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-----T-------CCEEEEESC----HHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC-
T ss_pred EEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC----HHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc-
Confidence 699999999999999988653 4 368899974 1111111110 001111 11112345555 44
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHc-CCCCcEEEEcCC
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMAS-FNEKPLILALSN 447 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~-~~erPIIFaLSN 447 (521)
++|++|-++... .....+..+++ .+..+-|++.+|
T Consensus 65 -~ad~vi~~~~~d--~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 65 -KNDVVVILTPRD--EVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp -TTCEEEECCSCH--HHHHHHHHHHHHTSCCCEEEECCC
T ss_pred -cCCEEEEecCCc--HHHHHHHHHHHHHcCCCeEEEEEe
Confidence 499999766532 23334444454 356666777665
No 237
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=76.42 E-value=7.6 Score=35.36 Aligned_cols=102 Identities=18% Similarity=0.151 Sum_probs=58.9
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-cccCCCCCHHHH
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-HEHEPVNNLLDA 406 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-~~~~~~~~L~ea 406 (521)
++..+++|.|| |-.|..+++.|++. |. ..+++++|++. ++.+.+......+. -+..+..++.++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~-----G~-----~~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~ 81 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQ-----GL-----FSKVTLIGRRK----LTFDEEAYKNVNQEVVDFEKLDDYASA 81 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHH-----TC-----CSEEEEEESSC----CCCCSGGGGGCEEEECCGGGGGGGGGG
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcC-----CC-----CCEEEEEEcCC----CCccccccCCceEEecCcCCHHHHHHH
Confidence 44578999995 77888888887663 42 12788888752 11111111111111 122223456677
Q ss_pred hcccCCcEEEEccCCCCC-------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 407 VKVIKPTILIGSSGVGRT-------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~-------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++. +|++|=+.+.... -+..+++.|.+...+-|||.=|
T Consensus 82 ~~~--~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 82 FQG--HDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp GSS--CSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 774 9999988764310 1456777887665567887544
No 238
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=76.38 E-value=2.1 Score=41.35 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=24.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-|+|+|||.||+..|..|.+. |+ ++.++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~-----G~-------~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 389999999999999888763 65 46677764
No 239
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=76.11 E-value=6.7 Score=38.25 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=25.8
Q ss_pred ceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+| +|..|..+|..+... |. +++++|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-----G~-------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-----GY-------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-----TC-------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-----CC-------eEEEEECC
Confidence 4899999 999999999988653 53 58888864
No 240
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=75.79 E-value=2.2 Score=41.88 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=58.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhc--hhhc-cccCCCCCHHHHhc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK--KPWA-HEHEPVNNLLDAVK 408 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k--~~fa-~~~~~~~~L~eav~ 408 (521)
.||.|+|||+-|..+|..|.+. | .++.++|+.-+ ..=+...+.-.. ..+. +......++.+ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-----g-------~~V~~~~r~~~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~ 68 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-----G-------EDVHFLLRRDY-EAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IG 68 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-----S-------CCEEEECSTTH-HHHHHTCEEEEETTCCEEESCCCEESCHHH-HC
T ss_pred CEEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEEcCcH-HHHHhCCCEEEcCCCeEEEeeceeecCHHH-cC
Confidence 4899999999999999988663 4 36888887531 000000010000 0000 00011134544 54
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcC-CCCcEEEEcCCCCC
Q 009982 409 VIKPTILIGSSGVGRTFTKEVIEAMASF-NEKPLILALSNPTS 450 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~-~erPIIFaLSNPt~ 450 (521)
.+|++| ++..+ ..++++++.++.+ .+..+|+.+.|--.
T Consensus 69 --~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~l~nGi~ 107 (312)
T 3hn2_A 69 --PMDLVL-VGLKT-FANSRYEELIRPLVEEGTQILTLQNGLG 107 (312)
T ss_dssp --CCSEEE-ECCCG-GGGGGHHHHHGGGCCTTCEEEECCSSSS
T ss_pred --CCCEEE-EecCC-CCcHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 378877 55544 4567899998754 35678888999763
No 241
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=75.23 E-value=2.6 Score=39.23 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.||+..|..|.+. | .++.++|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 34 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA-----R-------KNILLVDAG 34 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECC
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CCEEEEeCC
Confidence 5899999999999999988653 5 368899974
No 242
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.14 E-value=5.2 Score=37.92 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
||.|+|+|..|..+|..+... |. +++++|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-----g~-------~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-----GH-------YLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 799999999999999988653 42 58888864
No 243
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=75.03 E-value=2.7 Score=39.50 Aligned_cols=33 Identities=21% Similarity=0.243 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARY-----ML-------KTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHC-----CC-------cEEEEecc
Confidence 46899999999999999888653 53 58999997
No 244
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=74.77 E-value=2 Score=41.25 Aligned_cols=32 Identities=16% Similarity=0.290 Sum_probs=25.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|..+|..+... | .+++++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-----g-------~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-----G-------YSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 3899999999999999988653 4 257888864
No 245
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=74.39 E-value=8.4 Score=38.48 Aligned_cols=121 Identities=14% Similarity=0.114 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh-
Q 009982 315 LAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW- 393 (521)
Q Consensus 315 LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f- 393 (521)
....+.|++..+....+++++|.|||..|..++.++.. .|. +++.+|+. .++ +...++.+
T Consensus 172 ~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~~lG 232 (366)
T 1yqd_A 172 GITVYSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKA-----FGS-------KVTVISTS----PSK---KEEALKNFG 232 (366)
T ss_dssp HHHHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHH-----TTC-------EEEEEESC----GGG---HHHHHHTSC
T ss_pred HHHHHHHHHhcCcCCCCCEEEEECCCHHHHHHHHHHHH-----CCC-------EEEEEeCC----HHH---HHHHHHhcC
Confidence 33445667666555478999999999888877766543 252 57777753 111 11111111
Q ss_pred cc---ccCCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHh
Q 009982 394 AH---EHEPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAY 460 (521)
Q Consensus 394 a~---~~~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~ 460 (521)
|. +......+.+... ++|++|=+++.+ ...++.++.|+.. =.|.-++.+....+..+...+
T Consensus 233 a~~v~~~~~~~~~~~~~~--~~D~vid~~g~~-~~~~~~~~~l~~~---G~iv~~g~~~~~~~~~~~~~~ 296 (366)
T 1yqd_A 233 ADSFLVSRDQEQMQAAAG--TLDGIIDTVSAV-HPLLPLFGLLKSH---GKLILVGAPEKPLELPAFSLI 296 (366)
T ss_dssp CSEEEETTCHHHHHHTTT--CEEEEEECCSSC-CCSHHHHHHEEEE---EEEEECCCCSSCEEECHHHHH
T ss_pred CceEEeccCHHHHHHhhC--CCCEEEECCCcH-HHHHHHHHHHhcC---CEEEEEccCCCCCCcCHHHHH
Confidence 10 1011011223222 589998877643 3457788888642 234445554432344444443
No 246
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=74.37 E-value=2.7 Score=39.71 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|..|.+. |. ++.++|+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-----QA-------SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEEcCC
Confidence 35899999999999999888652 53 688999863
No 247
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=74.23 E-value=13 Score=36.22 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=62.1
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch-hchhhcc-ccC-CCCCH
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-FKKPWAH-EHE-PVNNL 403 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-~k~~fa~-~~~-~~~~L 403 (521)
++...+|+|.|| |-.|..+++.|++. .| .+++.+|+.. ++...+.. .+..+.. +.. +..++
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~r~~----~~~~~~~~~~~v~~~~~Dl~~d~~~~ 85 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILET----TD-------WEVFGMDMQT----DRLGDLVKHERMHFFEGDITINKEWV 85 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHH----SS-------CEEEEEESCC----TTTGGGGGSTTEEEEECCTTTCHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhC----CC-------CEEEEEeCCh----hhhhhhccCCCeEEEeCccCCCHHHH
Confidence 366789999995 89999998888763 13 3688888742 11111111 1112221 222 23457
Q ss_pred HHHhcccCCcEEEEccCCCC----------------CCCHHHHHHHHcCCCCcEEEEcC
Q 009982 404 LDAVKVIKPTILIGSSGVGR----------------TFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g----------------~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.+++++ +|++|=+.+... .-|..+++++.+.. +.+||.=|
T Consensus 86 ~~~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS 141 (372)
T 3slg_A 86 EYHVKK--CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPST 141 (372)
T ss_dssp HHHHHH--CSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECC
T ss_pred HHHhcc--CCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCc
Confidence 778885 999997665432 23467888888777 78998655
No 248
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=74.10 E-value=8.8 Score=36.53 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=58.8
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (521)
.||+|.|| |-.|..+++.|++. | .+++.+++. .+... +. ...+.. +.. ..++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~----~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~- 61 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND-----G-------NTPIILTRS----IGNKA-IN--DYEYRVSDYT-LEDLINQLN- 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESC----CC--------CCEEEECCCC-HHHHHHHTT-
T ss_pred CEEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCC----CCccc-CC--ceEEEEcccc-HHHHHHhhc-
Confidence 58999995 88999998888763 4 368888886 22211 22 111211 222 345777887
Q ss_pred cCCcEEEEccCCCCC------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGVGRT------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~~g~------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 62 -~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 62 -DVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp -TCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 59999988775432 1467888887766666888543
No 249
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=74.07 E-value=17 Score=36.76 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=70.5
Q ss_pred CCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 326 GGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 326 g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
|..|.+.++.|+|.|..|..+|+.+... |+ +++.+|+. .+ + ...... ....+|.|
T Consensus 136 ~~~l~g~tvGIiG~G~IG~~va~~~~~f-----g~-------~v~~~d~~-----~~-~---~~~~~~----~~~~~l~e 190 (334)
T 3kb6_A 136 ARELNRLTLGVIGTGRIGSRVAMYGLAF-----GM-------KVLCYDVV-----KR-E---DLKEKG----CVYTSLDE 190 (334)
T ss_dssp BCCGGGSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSS-----CC-H---HHHHTT----CEECCHHH
T ss_pred cceecCcEEEEECcchHHHHHHHhhccc-----Cc-------eeeecCCc-----cc-h---hhhhcC----ceecCHHH
Confidence 4678899999999999999999888543 54 57777753 11 1 111111 11257999
Q ss_pred HhcccCCcEEEEcc----CCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc-c-cCCcEE
Q 009982 406 AVKVIKPTILIGSS----GVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT-W-SKGRAI 468 (521)
Q Consensus 406 av~~vkptvLIG~S----~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~-w-t~G~ai 468 (521)
.++. .|+++=.- ..-+.|+++.++.|. +..++.=.|. -++-=|+|+- + ..|+.-
T Consensus 191 ll~~--sDivslh~Plt~~T~~li~~~~l~~mk---~~a~lIN~aR----G~iVde~aL~~aL~~g~i~ 250 (334)
T 3kb6_A 191 LLKE--SDVISLHVPYTKETHHMINEERISLMK---DGVYLINTAR----GKVVDTDALYRAYQRGKFS 250 (334)
T ss_dssp HHHH--CSEEEECCCCCTTTTTCBCHHHHHHSC---TTEEEEECSC----GGGBCHHHHHHHHHTTCEE
T ss_pred HHhh--CCEEEEcCCCChhhccCcCHHHHhhcC---CCeEEEecCc----cccccHHHHHHHHHhCCce
Confidence 9987 89887431 224799999999996 5667775554 4444444432 2 345543
No 250
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=74.03 E-value=2.8 Score=41.41 Aligned_cols=38 Identities=18% Similarity=0.084 Sum_probs=28.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+.+..+|+|+|||.||+..|..|.+. |+ ++.++|+.-.
T Consensus 8 ~m~~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~v~viE~~~~ 45 (379)
T 3alj_A 8 PGKTRRAEVAGGGFAGLTAAIALKQN-----GW-------DVRLHEKSSE 45 (379)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecCCC
Confidence 34567899999999999999888653 53 6888887543
No 251
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.01 E-value=5.3 Score=37.57 Aligned_cols=30 Identities=20% Similarity=0.281 Sum_probs=24.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
||.|+|+|..|..+|..|... |. +++++|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-----g~-------~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-----GV-------EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----TC-------EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHC-----CC-------eEEEeCC
Confidence 789999999999999998753 53 5776665
No 252
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=73.92 E-value=2.9 Score=39.69 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=23.6
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
||.|+|+|..|..+|..+.. |. +++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~------g~-------~V~~~~~~ 32 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR------RF-------PTLVWNRT 32 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT------TS-------CEEEECSS
T ss_pred eEEEEcccHHHHHHHHHHhC------CC-------eEEEEeCC
Confidence 79999999999999988743 32 47778763
No 253
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=73.92 E-value=13 Score=38.34 Aligned_cols=114 Identities=13% Similarity=0.146 Sum_probs=63.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (521)
++.+||+|+|.|.+|++.|+.+.+ .|. ++...|++-..... ..|. .-.++-.. ..-.++++
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l~~-----~G~-------~v~~~D~~~~~~~~--~~l~-~G~~~~~g----~~~~~~~~ 63 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFFLA-----RGV-------TPRVMDTRMTPPGL--DKLP-EAVERHTG----SLNDEWLM 63 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHHHT-----TTC-------CCEEEESSSSCTTG--GGSC-TTSCEEES----SCCHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHh-----CCC-------EEEEEECCCCcchh--HHhh-CCCEEEEC----CCcHHHhc
Confidence 567899999999999999876643 363 57788886431100 1121 11111000 11256676
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhcccCCcEEEecCCCCCcceeCCEE
Q 009982 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPFEYNGKV 484 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~wt~G~aifAsGSPf~pv~~~Gr~ 484 (521)
.+|.+|=.++.+- -.+++..+... ..|++ +. .|-++...+.+.|--||| ||||
T Consensus 64 --~~d~vV~s~gi~~-~~p~~~~a~~~--~~~v~---~~--------~~~~~~~~~~~vI~VTGT-------nGKT 116 (439)
T 2x5o_A 64 --AADLIVASPGIAL-AHPSLSAAADA--GIEIV---GD--------IELFCREAQAPIVAITGS-------NGKS 116 (439)
T ss_dssp --TCSEEEECTTSCT-TCHHHHHHHHT--TCEEE---CH--------HHHHHHHCCSCEEEEECS-------SSHH
T ss_pred --cCCEEEeCCCCCC-CCHHHHHHHHC--CCcEE---EH--------HHHHHHhcCCCEEEEECC-------CCHH
Confidence 4888775555442 34666655431 33443 21 233334445678888887 7774
No 254
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=73.62 E-value=2.8 Score=42.16 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
++|||+|||.||+..|..|.+. |.+ .+|.++|+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-----KYP-----GRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhh-----CcC-----CCEEEEeCCC
Confidence 5899999999999999998653 541 3799999865
No 255
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=73.54 E-value=2.9 Score=39.99 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|+|+|||.||+..|..+.+ .| .++.++|++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGM-----RG-------LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEeCCC
Confidence 4689999999999999988854 25 3689999864
No 256
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=73.15 E-value=5.2 Score=40.44 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=29.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
.+|||+|||.||+..|..|.+. |. ..+|.++|+..-.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-----g~-----~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-----GF-----EGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHcc-----Cc-----CCeEEEEECCCCC
Confidence 4899999999999999988653 54 2469999886543
No 257
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=73.05 E-value=6.4 Score=37.55 Aligned_cols=103 Identities=15% Similarity=0.213 Sum_probs=58.1
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh----chhhcc-ccCCCCCH
Q 009982 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----KKPWAH-EHEPVNNL 403 (521)
Q Consensus 330 ~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~----k~~fa~-~~~~~~~L 403 (521)
++.+|+|.|| |-.|..+++.|++. | .+++++|+..--.. .+.+... +..+.. +..+..++
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~~ 67 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEK-----G-------YEVYGADRRSGEFA--SWRLKELGIENDVKIIHMDLLEFSNI 67 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECSCCSTTT--THHHHHTTCTTTEEECCCCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC-----C-------CEEEEEECCCcccc--cccHhhccccCceeEEECCCCCHHHH
Confidence 4578999998 88888888887652 5 36888887421000 0001000 011111 11222357
Q ss_pred HHHhcccCCcEEEEccCCCCC------C----------CHHHHHHHHcCCC-CcEEEEcC
Q 009982 404 LDAVKVIKPTILIGSSGVGRT------F----------TKEVIEAMASFNE-KPLILALS 446 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~------F----------t~evv~~Ma~~~e-rPIIFaLS 446 (521)
.++++.+++|++|=+.+.... + |..+++++.+... +.|||.=|
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (345)
T 2z1m_A 68 IRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQAST 127 (345)
T ss_dssp HHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence 788888889999988875421 0 3345555554443 67888644
No 258
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=72.66 E-value=2.4 Score=41.84 Aligned_cols=98 Identities=19% Similarity=0.257 Sum_probs=55.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC----------CccccCCccCCchhchhhcccc
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK----------GLIVSSRKDSLQHFKKPWAHEH 397 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~----------GLi~~~R~~~l~~~k~~fa~~~ 397 (521)
.....||.|+|||+-|..+|..|.+. |. +++++ ++ |+.... ...+ +....
T Consensus 16 ~~~~~kI~IiGaGa~G~~~a~~L~~~-----G~-------~V~l~-~~~~~~~~i~~~g~~~~~-----~~~~--~~~~~ 75 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVGCYYGGMLARA-----GH-------EVILI-ARPQHVQAIEATGLRLET-----QSFD--EQVKV 75 (318)
T ss_dssp ----CEEEEESCSHHHHHHHHHHHHT-----TC-------EEEEE-CCHHHHHHHHHHCEEEEC-----SSCE--EEECC
T ss_pred hccCCcEEEECcCHHHHHHHHHHHHC-----CC-------eEEEE-EcHhHHHHHHhCCeEEEc-----CCCc--EEEee
Confidence 34568999999999999999998763 42 45544 32 111110 0000 00000
Q ss_pred CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCC-CCcEEEEcCCCCC
Q 009982 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFN-EKPLILALSNPTS 450 (521)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~-erPIIFaLSNPt~ 450 (521)
....++.+ ++ .+|++| ++... ...+++++.++.+. +..+|..++|...
T Consensus 76 ~~~~~~~~-~~--~~D~vi-lavk~-~~~~~~l~~l~~~l~~~~~iv~~~nGi~ 124 (318)
T 3hwr_A 76 SASSDPSA-VQ--GADLVL-FCVKS-TDTQSAALAMKPALAKSALVLSLQNGVE 124 (318)
T ss_dssp EEESCGGG-GT--TCSEEE-ECCCG-GGHHHHHHHHTTTSCTTCEEEEECSSSS
T ss_pred eeeCCHHH-cC--CCCEEE-EEccc-ccHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 01134433 44 378777 44433 36789999987643 4568888999875
No 259
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=72.60 E-value=3.1 Score=40.57 Aligned_cols=32 Identities=16% Similarity=0.318 Sum_probs=26.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|.++|..+... |. +++++|+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-----G~-------~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-----PG-------GVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-----TT-------CEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEeCC
Confidence 5899999999999999988653 53 57888874
No 260
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=72.36 E-value=2.5 Score=40.05 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|||+|||.||+..|..|.+. |+ ++.++|+.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARA-----EI-------KPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 46899999999999999988763 53 58888884
No 261
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=72.27 E-value=3.3 Score=41.70 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=29.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
...+|||+|||.||+..|..|.+. |.+ .+|.++|+..-
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~-----g~~-----~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQN-----GFE-----GRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----TCC-----SCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-----CcC-----CCEEEEecCCC
Confidence 357899999999999999998663 542 36888888643
No 262
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=71.91 E-value=12 Score=35.45 Aligned_cols=95 Identities=13% Similarity=0.204 Sum_probs=54.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
+|+|.|| |-.|..+++.|++. | .++.+++.. ..+.+.+...-..+.-+..+ .++.++++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~-----g--------~~v~~~~~~---~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~-- 63 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSES-----N--------EIVVIDNLS---SGNEEFVNEAARLVKADLAA-DDIKDYLKG-- 63 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT-----S--------CEEEECCCS---SCCGGGSCTTEEEECCCTTT-SCCHHHHTT--
T ss_pred EEEEECCCchHHHHHHHHHHhC-----C--------CEEEEEcCC---CCChhhcCCCcEEEECcCCh-HHHHHHhcC--
Confidence 7889997 77888888877542 3 344444321 11111111111111123334 678888884
Q ss_pred CcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 412 PTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 412 ptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|-+.+.... . |..++++|.+..-+.|||.=|
T Consensus 64 ~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS 114 (313)
T 3ehe_A 64 AEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTST 114 (313)
T ss_dssp CSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCc
Confidence 9999988775421 1 234777887766678998655
No 263
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=71.77 E-value=2.3 Score=39.90 Aligned_cols=36 Identities=28% Similarity=0.319 Sum_probs=27.9
Q ss_pred CcccceEEEeCc-ch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGA-GE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GA-Gs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.++++++||.|| |+ .|..+|+.+++. |. +++++|++
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~-----G~-------~V~~~~r~ 56 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLE-----GA-------DVVISDYH 56 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHC-----CC-------EEEEecCC
Confidence 478899999999 74 888888888653 53 58888874
No 264
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=71.67 E-value=3 Score=40.75 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
++-.|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~-----G~-------~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKY-----GL-------KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 346799999999999999888763 54 577888765
No 265
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=71.55 E-value=3.3 Score=41.25 Aligned_cols=32 Identities=38% Similarity=0.563 Sum_probs=26.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|.|+|+|..|.+||..++ + |. +++++|+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-----G~-------~V~v~d~~ 43 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-----KH-------EVVLQDVS 43 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-----TS-------EEEEECSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-----CC-------EEEEEECC
Confidence 468999999999999999987 6 53 57777763
No 266
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=71.47 E-value=8.5 Score=34.23 Aligned_cols=91 Identities=11% Similarity=0.169 Sum_probs=54.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh--chhhcc-ccCCCCCHHHHhc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF--KKPWAH-EHEPVNNLLDAVK 408 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~--k~~fa~-~~~~~~~L~eav~ 408 (521)
||+|.|| |-.|..+++.|++. | .++++++++. +.+... ...+.. +..+..+ ++++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~R~~-------~~~~~~~~~~~~~~~D~~d~~~--~~~~ 60 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-----G-------HEVTAIVRNA-------GKITQTHKDINILQKDIFDLTL--SDLS 60 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESCS-------HHHHHHCSSSEEEECCGGGCCH--HHHT
T ss_pred eEEEEcCCchhHHHHHHHHHhC-----C-------CEEEEEEcCc-------hhhhhccCCCeEEeccccChhh--hhhc
Confidence 7999996 88888888888653 5 3688887741 111110 111111 1111112 6776
Q ss_pred ccCCcEEEEccCCCCC-------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 409 VIKPTILIGSSGVGRT-------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~-------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
. +|++|=+.+.... .++.++++|.+...+.+||.-|
T Consensus 61 ~--~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 61 D--QNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp T--CSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred C--CCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 5 8999988765422 2367888888765567777654
No 267
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=71.46 E-value=5.9 Score=37.73 Aligned_cols=78 Identities=13% Similarity=0.156 Sum_probs=44.4
Q ss_pred CcccceEEEeCcc-h--HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc------cccC
Q 009982 328 TLAEHRFLFLGAG-E--AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA------HEHE 398 (521)
Q Consensus 328 ~L~d~riv~~GAG-s--Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa------~~~~ 398 (521)
.+++.++||.||. . .|.+||+.+++ .| -+++++|+.-+ . +.+...++.+. -|..
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~-----~G-------~~V~~~~r~~~--~---~~~~~l~~~~~~~~~~~~Dl~ 85 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHR-----EG-------AELAFTYVGQF--K---DRVEKLCAEFNPAAVLPCDVI 85 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHH-----TT-------CEEEEEECTTC--H---HHHHHHHGGGCCSEEEECCTT
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHH-----cC-------CEEEEeeCchH--H---HHHHHHHHhcCCceEEEeecC
Confidence 4778899999973 4 56667777655 25 35888888641 0 11111111111 1212
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 009982 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
...++.++++.+ ++|+||=..+..
T Consensus 86 ~~~~v~~~~~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 86 SDQEIKDLFVELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp CHHHHHHHHHHHHHHCSSCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccC
Confidence 223455555554 789999877754
No 268
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=71.45 E-value=6.4 Score=39.39 Aligned_cols=37 Identities=22% Similarity=0.243 Sum_probs=26.2
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
.--.+++|+|+|||..|...+.+... .|. ++++.+|+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~-----~Ga------~~Vi~~~~ 226 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKT-----AGA------SRIIGIDI 226 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHH-----HTC------SCEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC------CeEEEEcC
Confidence 33457899999999888777655543 264 57888875
No 269
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=71.43 E-value=3.6 Score=40.97 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=27.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
-+.-+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-----G~-------~V~v~E~~~ 56 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-----GI-------DCDVYEAVK 56 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 3457899999999999999988763 64 577888754
No 270
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=71.40 E-value=5.9 Score=36.97 Aligned_cols=92 Identities=14% Similarity=0.176 Sum_probs=56.2
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHH
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLD 405 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~e 405 (521)
.++..+|+|.|| |-.|..+++.|++. |. +.. .......+.. +..+..++.+
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~-----g~---------------------~~~-~~~~~~~~~~~D~~d~~~~~~ 55 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADG-----AG---------------------LPG-EDWVFVSSKDADLTDTAQTRA 55 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTT-----TC---------------------CTT-CEEEECCTTTCCTTSHHHHHH
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhc-----CC---------------------ccc-ccccccCceecccCCHHHHHH
Confidence 356789999996 88888888887653 43 000 0000000100 1112245888
Q ss_pred HhcccCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 406 AVKVIKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+++..++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 56 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS 113 (319)
T 4b8w_A 56 LFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLS 113 (319)
T ss_dssp HHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcc
Confidence 8888899999988776431 1234688887766667888544
No 271
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=71.39 E-value=3.3 Score=43.63 Aligned_cols=88 Identities=18% Similarity=0.199 Sum_probs=50.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc-cCCCCCHHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE-HEPVNNLLD 405 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~-~~~~~~L~e 405 (521)
..|...|++|+|-+.-..++++.|.+ .|+.. +.++-.. ..+.+... +...- ..+...|++
T Consensus 309 ~~l~Gkrv~i~~~~~~~~~l~~~L~e-----lGm~v------v~~~~~~------~~~~~~~~--~~~~v~~~D~~~le~ 369 (458)
T 3pdi_B 309 FMLSSARTAIAADPDLLLGFDALLRS-----MGAHT------VAAVVPA------RAAALVDS--PLPSVRVGDLEDLEH 369 (458)
T ss_dssp HHHTTCEEEEECCHHHHHHHHHHHHT-----TTCEE------EEEEESS------CCSCCTTT--TSSCEEESHHHHHHH
T ss_pred HhcCCCEEEEECCcHHHHHHHHHHHH-----CCCEE------EEEEECC------CChhhhhC--ccCcEEeCCHHHHHH
Confidence 45778999999999999999998843 37632 2222111 11111110 00000 012234778
Q ss_pred HhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 009982 406 AVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (521)
Q Consensus 406 av~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (521)
.++..+||.+||-|- .+.+.+.+ .-|.|
T Consensus 370 ~i~~~~pDllig~~~-----~~~~a~k~----gip~~ 397 (458)
T 3pdi_B 370 AARAGQAQLVIGNSH-----ALASARRL----GVPLL 397 (458)
T ss_dssp HHHHHTCSEEEECTT-----HHHHHHHT----TCCEE
T ss_pred HHHhcCCCEEEEChh-----HHHHHHHc----CCCEE
Confidence 888999999999654 23444444 46765
No 272
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=71.36 E-value=4.6 Score=40.01 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~-----~G~-------~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNK-----SGF-------KVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 4689999999999999988865 364 688999874
No 273
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.27 E-value=2.6 Score=42.96 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+||||+|+|.||+..|..|.+. +- .-+|.++|++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~VtlI~~~ 36 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-----MP-----DLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CT-----TCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-----Cc-----CCeEEEEcCC
Confidence 4799999999999999998653 21 1368888875
No 274
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=71.18 E-value=3.6 Score=41.18 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=27.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|||+|||.||+..|..|.+... .| .++.++|++-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~--~g-------~~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG--SK-------ADVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG--GG-------SEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC--CC-------CeEEEEeCCC
Confidence 479999999999999999876211 12 4788888765
No 275
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=71.10 E-value=3.7 Score=39.30 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+..|+|+|||.+|+.+|-.|.+. |. ++.++|+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-----G~-------~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-----GH-------EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 45799999999999999988763 53 68899987
No 276
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=71.09 E-value=3.3 Score=39.59 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-----Q-------LSTLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-----C-------CcEEEEeCC
Confidence 46899999999999999888653 5 368999987
No 277
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.96 E-value=4.9 Score=40.06 Aligned_cols=40 Identities=25% Similarity=0.364 Sum_probs=25.6
Q ss_pred HHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 404 LDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
...++..|||++||..+.. .+ .....|+....|+|.=-+|
T Consensus 85 ~~~l~~~~PDvVi~~g~~~-s~---p~~laA~~~~iP~vihe~n 124 (365)
T 3s2u_A 85 LRVIRQLRPVCVLGLGGYV-TG---PGGLAARLNGVPLVIHEQN 124 (365)
T ss_dssp HHHHHHHCCSEEEECSSST-HH---HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHhcCCCEEEEcCCcc-hH---HHHHHHHHcCCCEEEEecc
Confidence 4567888999999986633 11 1222344557899975555
No 278
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=70.92 E-value=4.1 Score=41.15 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=29.1
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
..+.+..|||+|||.+|+.+|-.|.+. | ..++.++|+
T Consensus 19 ~~m~~~dVvIIGgGiaGls~A~~La~~-----G------~~~V~vlE~ 55 (448)
T 3axb_A 19 SHMPRFDYVVVGAGVVGLAAAYYLKVW-----S------GGSVLVVDA 55 (448)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHH-----H------CSCEEEEES
T ss_pred ccCCcCCEEEECcCHHHHHHHHHHHhC-----C------CCcEEEEcc
Confidence 335667899999999999999988764 3 147999998
No 279
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=70.89 E-value=3.5 Score=41.12 Aligned_cols=36 Identities=17% Similarity=0.434 Sum_probs=28.7
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 59 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQN-----GI-------DVSVYERDN 59 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT-----TC-------EEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 3457899999999999999988653 54 688888764
No 280
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=70.77 E-value=3.8 Score=39.98 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+..|||+|||.+|+.+|..|.+. |+ ++.++|+..+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~-----G~-------~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKE-----NK-------NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCCC
Confidence 46899999999999999998763 53 6899998643
No 281
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=70.70 E-value=3.5 Score=40.85 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~-----G~-------~V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQ-----GH-------RVVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCCC
Confidence 46899999999999999988763 64 578888754
No 282
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=70.67 E-value=4.1 Score=35.66 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-+++|+|+|.+|+..|..+.+. | .++.++|+.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-----g-------~~v~lie~~ 33 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-----G-------LKVLVLDGG 33 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCC
Confidence 3799999999999999888653 4 468889875
No 283
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=73.41 E-value=0.87 Score=42.47 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=54.0
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhc
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVK 408 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~ 408 (521)
+.+.||.|+|+|..|..+|+.+... | .+++++|+.-- . +.+ +...-...++.++++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~-----G-------~~V~~~~r~~~----~-~~~-------~~~g~~~~~~~~~~~ 72 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQC-----G-------YSVVFGSRNPQ----V-SSL-------LPRGAEVLCYSEAAS 72 (201)
Confidence 4567899999999999999988653 4 24667776421 1 111 111111125666666
Q ss_pred ccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCC
Q 009982 409 VIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPT 449 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt 449 (521)
. +|++| ++..+. -+++++ .++...+..+|.-++|..
T Consensus 73 ~--aDvVi-lav~~~-~~~~v~-~l~~~~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 73 R--SDVIV-LAVHRE-HYDFLA-ELADSLKGRVLIDVSNNQ 108 (201)
Confidence 5 77766 333332 345555 233233456888899976
No 284
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=70.61 E-value=4.1 Score=40.58 Aligned_cols=35 Identities=11% Similarity=0.176 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
...+|+|+|||.||+..|..|.+. |+ ++.++|+.-
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-----GV-------DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-----CC-------CEEEEecCC
Confidence 456899999999999999988763 64 577777653
No 285
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=70.47 E-value=7 Score=36.74 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=58.6
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
||+|.|| |-.|..+++.|.+. .| .++..++++.- +...+......+.. +-.+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~----~g-------~~V~~~~R~~~----~~~~~~~~~v~~~~~D~~d~~~l~~~~~~- 65 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIAN----HI-------DHFHIGVRNVE----KVPDDWRGKVSVRQLDYFNQESMVEAFKG- 65 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHT----TC-------TTEEEEESSGG----GSCGGGBTTBEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEEcCCchHHHHHHHHHhhC----CC-------CcEEEEECCHH----HHHHhhhCCCEEEEcCCCCHHHHHHHHhC-
Confidence 6899996 88998888886441 13 46777776421 11112111112221 22223468888886
Q ss_pred CCcEEEEccCCCCC------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRT------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.|++|=+++.... .++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 66 -MDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp -CSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -CCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8999988765321 2467888888766677888533
No 286
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.44 E-value=3.8 Score=39.03 Aligned_cols=33 Identities=24% Similarity=0.389 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-----GF-------SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-----CC-------cEEEEeCC
Confidence 46899999999999999888653 53 58899985
No 287
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=69.97 E-value=3.5 Score=42.13 Aligned_cols=42 Identities=26% Similarity=0.371 Sum_probs=30.8
Q ss_pred HhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 324 LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 324 ~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+.++.-+..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~~~~~~~~v~IIGaG~aGl~aA~~L~~~-----g-------~~v~v~E~~~~ 45 (489)
T 2jae_A 4 LIGKVKGSHSVVVLGGGPAGLCSAFELQKA-----G-------YKVTVLEARTR 45 (489)
T ss_dssp CCCCCCSCCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSSS
T ss_pred hhhcccCCCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeccCC
Confidence 334444567999999999999999888653 5 35777777643
No 288
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=69.88 E-value=2.7 Score=42.55 Aligned_cols=36 Identities=28% Similarity=0.450 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
.-||||+|||.||+..|+.|. ..| .+|.++|+.--+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~-----~~~-------~~itlie~~~~~ 44 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAAL-----GKC-------DDITMINSEKYL 44 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHT-----TTC-------SCEEEECSSSSC
T ss_pred CCCEEEEcCcHHHHHHHHHHh-----CCC-------CEEEEEECCCCC
Confidence 458999999999999999981 112 479999886543
No 289
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=69.87 E-value=3.6 Score=39.25 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|+|+|||.+|+..|..|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~-----G~-------~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA-----GH-------QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 4799999999999999988763 64 588888763
No 290
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=69.85 E-value=4.2 Score=40.66 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|..|.+. |+ +++.++|+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-----G~------~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-----GI------GKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC------SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-----CC------CeEEEEECCC
Confidence 46899999999999999988763 64 2377777653
No 291
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=69.67 E-value=4.1 Score=39.65 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|..+.+ .| .++.++|+..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~-----~g-------~~v~lie~~~ 47 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGM-----NN-------ISCRIIESMP 47 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CCEEEEecCC
Confidence 5689999999999999988764 25 3688999864
No 292
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=69.52 E-value=4.7 Score=38.11 Aligned_cols=98 Identities=16% Similarity=0.177 Sum_probs=58.0
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhcc
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKV 409 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~ 409 (521)
.+|+|.|| |-.|..+++.|++.- .| .+++++|+.. .... +.+ +..+.. +..+..++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~---~g-------~~V~~~~r~~----~~~~-~~~-~~~~~~~D~~d~~~~~~~~~~ 66 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLY---GT-------ENVIASDIRK----LNTD-VVN-SGPFEVVNALDFNQIEHLVEV 66 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHH---CG-------GGEEEEESCC----CSCH-HHH-SSCEEECCTTCHHHHHHHHHH
T ss_pred ceEEEECCccHHHHHHHHHHHHhC---CC-------CEEEEEcCCC----cccc-ccC-CCceEEecCCCHHHHHHHHhh
Confidence 57999998 888998988886530 12 3688888641 1110 111 111111 22222457788886
Q ss_pred cCCcEEEEccCCCCC---------------CCHHHHHHHHcCCCCcEEEEc
Q 009982 410 IKPTILIGSSGVGRT---------------FTKEVIEAMASFNEKPLILAL 445 (521)
Q Consensus 410 vkptvLIG~S~~~g~---------------Ft~evv~~Ma~~~erPIIFaL 445 (521)
.++|++|=+.+.... -|..+++++.+..-+.+||.=
T Consensus 67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~S 117 (312)
T 2yy7_A 67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPS 117 (312)
T ss_dssp TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCE
T ss_pred cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 679999988775321 133567777665556788743
No 293
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=69.03 E-value=4.3 Score=40.43 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.9
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~-----G~-------~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA-----GK-------KVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc-----CC-------eEEEEecCC
Confidence 699999999999999998764 53 577787643
No 294
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=68.94 E-value=4 Score=39.91 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..|+|+|||.+|+.+|..|.+. |. ++.++|+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-----G~-------~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-----GE-------EVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCC
Confidence 46799999999999999998763 53 599999874
No 295
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=68.93 E-value=4.8 Score=39.44 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHH-HHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIAL-EISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~-~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..|+|+|||.+|+.+|-.|.+ . |. .++.++|+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~-----G~------~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNH-----GI------TNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-----CC------CCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhc-----CC------CcEEEEeCCC
Confidence 4689999999999999999876 3 51 3699999875
No 296
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=68.84 E-value=10 Score=36.16 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=57.2
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
+|+|.|| |-.|..+++.|++. | .+++.+|+.- ....+.+.. ...+.. +..+..++.++++..
T Consensus 3 ~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~ 66 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLVDE-----G-------LSVVVVDNLQ---TGHEDAITE-GAKFYNGDLRDKAFLRDVFTQE 66 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCGGGSCT-TSEEEECCTTCHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHhC-----C-------CEEEEEeCCC---cCchhhcCC-CcEEEECCCCCHHHHHHHHhhc
Confidence 7899986 88888888887652 4 3688887641 111111211 111211 212223577788755
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 67 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 118 (330)
T 2c20_A 67 NIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSST 118 (330)
T ss_dssp CEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCC
Confidence 69999988775421 1345677776655567888544
No 297
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=68.72 E-value=4 Score=38.23 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=25.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEE-EecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICL-VDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~l-vDs~ 375 (521)
..+|||+|||.||+..|..|.+. |. ++.+ +|+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~e~~ 37 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-----GL-------KNVVMFEKG 37 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-----TC-------SCEEEECSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----CC-------CeEEEEeCC
Confidence 35899999999999999988763 53 4556 8873
No 298
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=68.68 E-value=3.5 Score=38.76 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|..+|+.+... | .+++++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~-----g-------~~v~~~~~~ 35 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQT-----P-------HELIISGSS 35 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS-----S-------CEEEEECSS
T ss_pred cEEEEECCCHHHHHHHHHHHhC-----C-------CeEEEECCC
Confidence 4899999999999998887542 3 367888863
No 299
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=68.53 E-value=2.5 Score=45.63 Aligned_cols=38 Identities=18% Similarity=0.305 Sum_probs=33.4
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 28 ~~L~~~~VlvvG~GGlGseiak~La~a-----GV------g~itlvD~D 65 (531)
T 1tt5_A 28 EALESAHVCLINATATGTEILKNLVLP-----GI------GSFTIIDGN 65 (531)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHHTT-----TC------SEEEEECCC
T ss_pred HHHhcCeEEEECcCHHHHHHHHHHHHc-----CC------CeEEEEeCC
Confidence 457789999999999999999999875 75 789999976
No 300
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=68.52 E-value=16 Score=39.02 Aligned_cols=120 Identities=19% Similarity=0.122 Sum_probs=72.4
Q ss_pred CCCceeccCCC---chHHHHHHHHHHHHHH------------------hCCCcccceEEEeCcchHHHHHHHHHHHHHHH
Q 009982 298 TTHLVFNDDIQ---GTASVVLAGVVAALKL------------------IGGTLAEHRFLFLGAGEAGTGIAELIALEISK 356 (521)
Q Consensus 298 ~~~~~FnDDiQ---GTaaV~LAgll~Alk~------------------~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~ 356 (521)
..+.|.|---- .+|=-++|.+|+..|- .|..|.+.++.|+|.|..|..+|+.+...
T Consensus 88 ~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~--- 164 (529)
T 1ygy_A 88 RGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF--- 164 (529)
T ss_dssp TTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTT---
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHHHHhC---
Confidence 35566664332 2344577777776653 24678999999999999999999988542
Q ss_pred hcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEcc----CCCCCCCHHHHHH
Q 009982 357 QTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGSS----GVGRTFTKEVIEA 432 (521)
Q Consensus 357 ~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~S----~~~g~Ft~evv~~ 432 (521)
|+ +++.+|+.- .+ + ..+ .+ .-...+|.|+++. +|+++=+. ...++++++.+..
T Consensus 165 --G~-------~V~~~d~~~----~~-~---~a~-~~---g~~~~~l~e~~~~--aDvV~l~~P~~~~t~~~i~~~~~~~ 221 (529)
T 1ygy_A 165 --GA-------YVVAYDPYV----SP-A---RAA-QL---GIELLSLDDLLAR--ADFISVHLPKTPETAGLIDKEALAK 221 (529)
T ss_dssp --TC-------EEEEECTTS----CH-H---HHH-HH---TCEECCHHHHHHH--CSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred --CC-------EEEEECCCC----Ch-h---HHH-hc---CcEEcCHHHHHhc--CCEEEECCCCchHHHHHhCHHHHhC
Confidence 53 588888642 11 0 000 00 0001267777776 77776442 2234666666665
Q ss_pred HHcCCCCcEEEEcC
Q 009982 433 MASFNEKPLILALS 446 (521)
Q Consensus 433 Ma~~~erPIIFaLS 446 (521)
|. +..+|.=.|
T Consensus 222 ~k---~g~ilin~a 232 (529)
T 1ygy_A 222 TK---PGVIIVNAA 232 (529)
T ss_dssp SC---TTEEEEECS
T ss_pred CC---CCCEEEECC
Confidence 53 456777666
No 301
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=68.36 E-value=4.3 Score=39.55 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=28.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..|+|+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~-----G~-------~V~vie~~~~~ 38 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ-----GV-------KTLLVDAFDPP 38 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988763 53 68999987543
No 302
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=68.23 E-value=6 Score=37.62 Aligned_cols=87 Identities=13% Similarity=0.137 Sum_probs=55.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
..+|+|.|| |-.|..+++.|++ .|. +++++++. ...| +. +..++.++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~-----~g~-------~v~~~~r~-----~~~D-~~-----------d~~~~~~~~~~ 53 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQ-----RGD-------VELVLRTR-----DELN-LL-----------DSRAVHDFFAS 53 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTT-----CTT-------EEEECCCT-----TTCC-TT-----------CHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHh-----CCC-------eEEEEecC-----ccCC-cc-----------CHHHHHHHHHh
Confidence 468999996 8888888887754 242 46666543 1111 21 12357777876
Q ss_pred cCCcEEEEccCCCCC-----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGVGRT-----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~~g~-----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+++|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 679999988875531 1345677776655567888544
No 303
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=67.93 E-value=4.9 Score=34.07 Aligned_cols=34 Identities=24% Similarity=0.482 Sum_probs=26.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...+|+|+|+|..|..+|+.|.+. | .+++++|++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~-----g-------~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA-----G-------KKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEECC
Confidence 346899999999999999988653 5 368888874
No 304
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=67.78 E-value=9.2 Score=37.72 Aligned_cols=103 Identities=14% Similarity=0.144 Sum_probs=59.0
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc-hhchhhcc-ccCCCCCHH
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ-HFKKPWAH-EHEPVNNLL 404 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~-~~k~~fa~-~~~~~~~L~ 404 (521)
+++..+|+|.|| |-.|..+++.|++. | ..+++.+|+..- .....+. ..+..+.. +..+..++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~r~~~---~~~~~l~~~~~v~~~~~Dl~d~~~l~ 94 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLEL-----G------VNQVHVVDNLLS---AEKINVPDHPAVRFSETSITDDALLA 94 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHT-----T------CSEEEEECCCTT---CCGGGSCCCTTEEEECSCTTCHHHHH
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHc-----C------CceEEEEECCCC---CchhhccCCCceEEEECCCCCHHHHH
Confidence 466679999997 88888888887652 4 146888877421 1001121 01111111 111223466
Q ss_pred HHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcC-CCCcEEEEcC
Q 009982 405 DAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASF-NEKPLILALS 446 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~-~erPIIFaLS 446 (521)
++++ ++|++|=+.+.... -|..+++++.+. .-+.+||.=|
T Consensus 95 ~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS 151 (377)
T 2q1s_A 95 SLQD--EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAA 151 (377)
T ss_dssp HCCS--CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred HHhh--CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCC
Confidence 6676 59999988775421 145567777665 4467887544
No 305
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=67.71 E-value=4.6 Score=38.17 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=26.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.||+..|..+.+. |. .++.++|+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~------~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-----GV------KNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC------SSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHC-----CC------CcEEEEcCC
Confidence 3799999999999999988653 53 278999985
No 306
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=67.59 E-value=2.5 Score=40.11 Aligned_cols=99 Identities=10% Similarity=0.068 Sum_probs=59.0
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCc--cCCchhchhhcc-ccCCCCCHHHH
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRK--DSLQHFKKPWAH-EHEPVNNLLDA 406 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~--~~l~~~k~~fa~-~~~~~~~L~ea 406 (521)
..+|+|.|| |..|..+++.|++. | ..++..++++. .+. ..+......+.. +..+..+|.++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g------~~~V~~~~R~~----~~~~~~~l~~~~~~~~~~D~~d~~~l~~~ 69 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED-----G------TFKVRVVTRNP----RKKAAKELRLQGAEVVQGDQDDQVIMELA 69 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH-----C------SSEEEEEESCT----TSHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc-----C------CceEEEEEcCC----CCHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 368999998 88999998888763 3 13677777742 110 001111111111 22223468888
Q ss_pred hcccCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcCC
Q 009982 407 VKVIKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
+++ +|++|-+++.... .++.++++|.+..-+-||| .|-
T Consensus 70 ~~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~-~S~ 115 (299)
T 2wm3_A 70 LNG--AYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVY-SGL 115 (299)
T ss_dssp HTT--CSEEEECCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE-CCC
T ss_pred Hhc--CCEEEEeCCCCccccchHHHHHHHHHHHHHHHcCCCEEEE-EcC
Confidence 886 8999987653211 3556778887665567888 664
No 307
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.55 E-value=4.4 Score=39.32 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..|+|+|||.+|+.+|-.|.+. |+ ++.++|+....
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~-----G~-------~V~vle~~~~~ 37 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA-----GL-------NVLMTDAHMPP 37 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT-----TC-------CEEEECSSCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEecCCCC
Confidence 4799999999999999988763 53 68999987543
No 308
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=67.40 E-value=13 Score=35.40 Aligned_cols=78 Identities=14% Similarity=0.226 Sum_probs=42.6
Q ss_pred CCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHH
Q 009982 326 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (521)
Q Consensus 326 g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (521)
..+++++++||-||++ .|.++|+.++ + .|. +++++|++.- .+......+.-|..+..++.
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~----~-~G~-------~V~~~~r~~~-------~~~~~~~~~~~Dv~~~~~v~ 69 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALV----R-YGA-------KVVSVSLDEK-------SDVNVSDHFKIDVTNEEEVK 69 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHH----H-TTC-------EEEEEESCC---------CTTSSEEEECCTTCHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHH----H-CCC-------EEEEEeCCch-------hccCceeEEEecCCCHHHHH
Confidence 4578899999999854 3444555444 3 363 5888886421 11111111212222223455
Q ss_pred HHhccc-----CCcEEEEccCCC
Q 009982 405 DAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 405 eav~~v-----kptvLIG~S~~~ 422 (521)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~iD~lv~nAg~~ 92 (269)
T 3vtz_A 70 EAVEKTTKKYGRIDILVNNAGIE 92 (269)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCcC
Confidence 555554 799999776643
No 309
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=67.38 E-value=5 Score=39.53 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|+|+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~-----G~-------~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA-----GI-------DNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 4799999999999999988764 64 577888654
No 310
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=67.26 E-value=10 Score=35.97 Aligned_cols=98 Identities=16% Similarity=0.296 Sum_probs=55.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
||+|.|| |-.|..+++.|++. | .+++++|+.- ......+.. ...+.. +..+..++.++++..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~---~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~ 65 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLAR-----G-------LEVAVLDNLA---TGKRENVPK-GVPFFRVDLRDKEGVERAFREF 65 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEECCCS---SCCGGGSCT-TCCEECCCTTCHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHC-----C-------CEEEEEECCC---cCchhhccc-CeEEEECCCCCHHHHHHHHHhc
Confidence 6888887 77888888777642 5 3577777621 111111211 111111 112223577788766
Q ss_pred CCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 66 ~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 117 (311)
T 2p5y_A 66 RPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFAST 117 (311)
T ss_dssp CCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 79999988775431 0345667776655567888544
No 311
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=67.17 E-value=4.2 Score=41.74 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=26.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
||||+|||.||+..|..+.+. |. .-+|.++|+..
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-----g~-----~~~V~lie~~~ 35 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-----DK-----ESDIIIFEKDR 35 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-----CS-----SSCEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhC-----CC-----CCcEEEEeCCC
Confidence 799999999999999888653 42 23688998754
No 312
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.08 E-value=5.3 Score=37.21 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=27.7
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 326 g~~L~d~riv~~GAG---sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..++++.++||.||+ -.|.++|+.+++. | -+++++|+.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~-----G-------~~V~~~~r~ 49 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKRE-----G-------AELAFTYVG 49 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHc-----C-------CCEEEEecc
Confidence 356889999999984 4666677777652 5 368888876
No 313
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=67.06 E-value=4.2 Score=37.95 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=55.8
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
||+|.|| |-.|..+++.|++. ..| .+++.++++. ++...+......+.. +..+..++.+++++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~- 65 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKT---VPA-------SQIVAIVRNP----AKAQALAAQGITVRQADYGDEAALTSALQG- 65 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTCHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred CEEEEcCCchHHHHHHHHHHhh---CCC-------ceEEEEEcCh----HhhhhhhcCCCeEEEcCCCCHHHHHHHHhC-
Confidence 5888997 88888888877542 002 3688888741 111111111111111 21222467788876
Q ss_pred CCcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+++... ..++.++++|.+..-+.|||.=|
T Consensus 66 -~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 66 -VEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp -CSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred -CCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998776421 24678888887766567887543
No 314
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=67.04 E-value=5.1 Score=39.52 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=28.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..|||+|||.+|+.+|-.|.+. |. ++.++|+....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~-----G~-------~V~vlE~~~~~ 39 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAER-----GH-------RVLVLERHTFF 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSCTT
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeCCCCC
Confidence 5799999999999999988763 63 68999987654
No 315
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=67.03 E-value=3.4 Score=39.18 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=26.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARA-----NL-------QPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-----TC-------CCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEccC
Confidence 456899999999999999988652 53 46778853
No 316
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=66.97 E-value=13 Score=35.49 Aligned_cols=96 Identities=20% Similarity=0.145 Sum_probs=54.7
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
||+|.|| |-.|..+++.|++. | .+++.+|+.. +..+.+...+..+.. +..+..++.+++++
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAA-----G-------HDLVLIHRPS----SQIQRLAYLEPECRVAEMLDHAGLERALRG- 77 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-----T-------CEEEEEECTT----SCGGGGGGGCCEEEECCTTCHHHHHHHTTT-
T ss_pred EEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEecCh----HhhhhhccCCeEEEEecCCCHHHHHHHHcC-
Confidence 8999996 88888888888652 4 3688888742 111112211111211 21222457788875
Q ss_pred CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+..+. -|..+++++.+..-+.+||.=|
T Consensus 78 -~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 78 -LDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp -CSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred -CCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 9999988765431 1346777776655567888543
No 317
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=66.73 E-value=5 Score=40.27 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=29.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
+..|||+|||.+|+.+|-.|.+. |. +++.++|+....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~-----G~------~~V~vlE~~~~~ 42 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARR-----GY------TNVTVLDPYPVP 42 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEEESSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHc-----CC------CcEEEEeCCCCC
Confidence 45799999999999999888763 64 279999987653
No 318
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=66.47 E-value=9 Score=35.26 Aligned_cols=101 Identities=20% Similarity=0.157 Sum_probs=59.3
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (521)
..-.+|+|.|| |-.|..+++.|++. |- -++++++++. ++...+......+.. +..+..++.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~-----G~------~~V~~~~R~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 85 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADK-----QT------IKQTLFARQP----AKIHKPYPTNSQIIMGDVLNHAALKQA 85 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC-----TT------EEEEEEESSG----GGSCSSCCTTEEEEECCTTCHHHHHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhC-----CC------ceEEEEEcCh----hhhcccccCCcEEEEecCCCHHHHHHH
Confidence 34468999995 77888888877642 41 3677777752 111111111111111 22223467788
Q ss_pred hcccCCcEEEEccCCCCC--CCHHHHHHHHcCCCCcEEEEcC
Q 009982 407 VKVIKPTILIGSSGVGRT--FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 407 v~~vkptvLIG~S~~~g~--Ft~evv~~Ma~~~erPIIFaLS 446 (521)
++. .|++|=+.+.... -++.+++.|.+..-+-|||.=|
T Consensus 86 ~~~--~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 86 MQG--QDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp HTT--CSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred hcC--CCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 886 7999966654332 2677899998766667888555
No 319
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=66.45 E-value=6.1 Score=39.95 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=30.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..+|||+|||.||+..|..+.+. |. ..++.++|+..-+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~~ 44 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQA-----GY-----QGLITVVGDEAER 44 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHH-----TC-----CSCEEEEESSCSC
T ss_pred CCcEEEECChHHHHHHHHHHHcc-----CC-----CCeEEEEECCCCC
Confidence 46799999999999999998764 53 1368999987644
No 320
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=66.37 E-value=5.9 Score=38.64 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..|+|+|||.+|+.+|-.|.+ .| .++.++|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~-----~G-------~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR-----KG-------YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-----TT-------CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-----CC-------CEEEEEeccC
Confidence 4589999999999999998865 25 3699999864
No 321
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=66.17 E-value=5.5 Score=41.53 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=28.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
...+|+|+|+|.||+..|..|.+. |. ++.++|+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-----G~-------~V~v~e~~~ 155 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-----GY-------EVHVYDRYD 155 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-----TC-------CEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-----CC-------eEEEEeccC
Confidence 357899999999999999998764 53 588998753
No 322
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=66.13 E-value=4.5 Score=41.54 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..+|||+|||.||+..|..|.+.. .| .+|.++|+..-
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~---~g-------~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD---PE-------AHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC---TT-------SEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC---cC-------CCEEEEECCCc
Confidence 468999999999999999887641 12 46888888654
No 323
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=66.03 E-value=4.2 Score=38.84 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=27.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
...+|+|+|||.||+..|..|.+. |+ ++.++|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~-----g~-------~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARA-----EL-------KPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------eEEEEec
Confidence 456899999999999999988653 53 5788887
No 324
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=65.95 E-value=6.9 Score=36.76 Aligned_cols=86 Identities=10% Similarity=0.231 Sum_probs=55.0
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
||+|.|| |-.|..+++.|+ . | .+++.+|+..-.. .-+..+..++.++++..+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~-----g-------~~V~~~~r~~~~~--------------~~D~~d~~~~~~~~~~~~ 54 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-P-----V-------GNLIALDVHSKEF--------------CGDFSNPKGVAETVRKLR 54 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-T-----T-------SEEEEECTTCSSS--------------CCCTTCHHHHHHHHHHHC
T ss_pred eEEEECCCCHHHHHHHHHhh-c-----C-------CeEEEeccccccc--------------cccCCCHHHHHHHHHhcC
Confidence 6899998 888888888775 3 3 3688887753111 011112235778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+.... -|..+++++.+..- .+||.=|
T Consensus 55 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 104 (299)
T 1n2s_A 55 PDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYST 104 (299)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEE
T ss_pred CCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEec
Confidence 9999988875431 14566777765443 5888544
No 325
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=65.78 E-value=5.3 Score=40.92 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-----G-------AQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEeCC
Confidence 46899999999999999887652 5 379999986
No 326
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=65.63 E-value=16 Score=32.65 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 314 VLAGVVAALKLIGGTLAEHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 314 ~LAgll~Alk~~g~~L~d~riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.++.-+.++.....--.+++++|.| +|..|..+++++... |. +++.+|+.
T Consensus 22 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-----G~-------~V~~~~~~ 72 (198)
T 1pqw_A 22 AYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMI-----GA-------RIYTTAGS 72 (198)
T ss_dssp HHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHH-----TC-------EEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHc-----CC-------EEEEEeCC
Confidence 3344444554333334568999999 588888888776543 52 57878763
No 327
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=65.60 E-value=16 Score=36.53 Aligned_cols=136 Identities=18% Similarity=0.236 Sum_probs=72.2
Q ss_pred CCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccC
Q 009982 306 DIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDS 385 (521)
Q Consensus 306 DiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~ 385 (521)
+.++.....++..+.|++..+.+ .+++++|.|||..|...+.+... .|. ++++.+|+.
T Consensus 159 ~~~aal~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~~---------- 216 (370)
T 4ej6_A 159 PVHGAFCEPLACCLHGVDLSGIK-AGSTVAILGGGVIGLLTVQLARL-----AGA------TTVILSTRQ---------- 216 (370)
T ss_dssp TTGGGGHHHHHHHHHHHHHHTCC-TTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEECSC----------
T ss_pred HHHHhhhhHHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----------
Confidence 34554444556666677665543 46899999999877766554432 364 478877753
Q ss_pred Cchhchhhccc-------cCCCCCHHHHhcc---c---CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCC--
Q 009982 386 LQHFKKPWAHE-------HEPVNNLLDAVKV---I---KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTS-- 450 (521)
Q Consensus 386 l~~~k~~fa~~-------~~~~~~L~eav~~---v---kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~-- 450 (521)
+.+..+++. .....++.+.++. . +.|++|=+++.+ ..-++.++.++. .=-|.-+..+..
T Consensus 217 --~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~G~~-~~~~~~~~~l~~---~G~vv~~G~~~~~~ 290 (370)
T 4ej6_A 217 --ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVA-ETVKQSTRLAKA---GGTVVILGVLPQGE 290 (370)
T ss_dssp --HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECSCCCTTC
T ss_pred --HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECCCCH-HHHHHHHHHhcc---CCEEEEEeccCCCC
Confidence 112223221 0112456666654 1 578988877633 233455555543 222333443332
Q ss_pred CCCCCHHHHhcccCCcEEEec
Q 009982 451 QSECTAEEAYTWSKGRAIFAS 471 (521)
Q Consensus 451 ~~Ectpe~A~~wt~G~aifAs 471 (521)
..+..+.+.+. ++.-|..+
T Consensus 291 ~~~~~~~~~~~--~~~~i~g~ 309 (370)
T 4ej6_A 291 KVEIEPFDILF--RELRVLGS 309 (370)
T ss_dssp CCCCCHHHHHH--TTCEEEEC
T ss_pred ccccCHHHHHh--CCcEEEEe
Confidence 34566655542 34445443
No 328
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=65.33 E-value=5 Score=41.51 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=28.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|+|+|||.||+..|..+.+.. ..|++ ..++.++|+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~--~~G~~----~~~V~v~E~~~ 41 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ--EKGAE----IPELVCFEKQA 41 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH--HTTCC----CCEEEEECSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhh--hcCCC----CCcEEEEEcCC
Confidence 48999999999999999997632 12542 01388999863
No 329
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=64.86 E-value=23 Score=34.90 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=57.6
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhc
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVK 408 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~ 408 (521)
..+|+|.|| |-.|..+++.|++. | .+++.+|+.- .....+...+..+.. +..+..++.++++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~ 92 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHE-----G-------HYVIASDWKK----NEHMTEDMFCDEFHLVDLRVMENCLKVTE 92 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----CSSSCGGGTCSEEEECCTTSHHHHHHHHT
T ss_pred CCeEEEECCccHHHHHHHHHHHHC-----C-------CeEEEEECCC----ccchhhccCCceEEECCCCCHHHHHHHhC
Confidence 468999998 88888888887652 4 3688888752 111111111111211 2122235777887
Q ss_pred ccCCcEEEEccCCCCC--C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 409 VIKPTILIGSSGVGRT--F---------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 409 ~vkptvLIG~S~~~g~--F---------------t~evv~~Ma~~~erPIIFaLS 446 (521)
. +|++|=+.+.... + |..+++++.+..-+.|||.=|
T Consensus 93 ~--~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS 145 (379)
T 2c5a_A 93 G--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 145 (379)
T ss_dssp T--CSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--CCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 4 9999988775432 1 235667776655567888544
No 330
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=64.76 E-value=5.1 Score=40.81 Aligned_cols=37 Identities=27% Similarity=0.461 Sum_probs=29.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
...+|+|+|||.||+..|..|.+. |.. .++.++|+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-----G~~-----~~V~v~E~~~ 41 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-----KAF-----DQVTLFERRG 41 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-----TCC-----SEEEEECSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-----CCC-----CCeEEEecCC
Confidence 346899999999999999988753 531 3789999873
No 331
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=64.70 E-value=6.9 Score=37.18 Aligned_cols=77 Identities=12% Similarity=0.128 Sum_probs=42.9
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-------cccC
Q 009982 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (521)
Q Consensus 327 ~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-------~~~~ 398 (521)
.+|+++++||-||+. .|.++|+.+++ .| -+++++|++- + .+....+.+. -|..
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~-----~G-------~~V~~~~r~~----~---~~~~~~~~~~~~~~~~~~Dv~ 67 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLAR-----AG-------ARVVLADLPE----T---DLAGAAASVGRGAVHHVVDLT 67 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEECTT----S---CHHHHHHHHCTTCEEEECCTT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEcCCH----H---HHHHHHHHhCCCeEEEECCCC
Confidence 367888999999743 44455555544 35 3688888741 1 1222221111 1112
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 009982 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
+..++.++++.+ +.|+||=..+..
T Consensus 68 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 68 NEVSVRALIDFTIDTFGRLDIVDNNAAHS 96 (271)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 223455556544 799999877654
No 332
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=64.67 E-value=11 Score=37.01 Aligned_cols=86 Identities=19% Similarity=0.089 Sum_probs=54.8
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
+.||+++|+ |..|--+++.+.+. |. +-++.+|.+.. + .+ .+ ..+-..++.|+.+.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~-----g~------~~V~~V~p~~~---g-~~-------~~--G~~vy~sl~el~~~ 62 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAY-----GT------KMVGGVTPGKG---G-TT-------HL--GLPVFNTVREAVAA 62 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-----TC------EEEEEECTTCT---T-CE-------ET--TEEEESSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC-----CC------eEEEEeCCCcc---c-ce-------eC--CeeccCCHHHHhhc
Confidence 469999999 99887777766542 53 35667776411 0 01 01 11123679998875
Q ss_pred cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEE
Q 009982 410 IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLI 442 (521)
Q Consensus 410 vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPII 442 (521)
.++|+.|=++ ++ .+..+++++..+..-+.+|
T Consensus 63 ~~~D~viI~t-P~-~~~~~~~~ea~~~Gi~~iV 93 (288)
T 2nu8_A 63 TGATASVIYV-PA-PFCKDSILEAIDAGIKLII 93 (288)
T ss_dssp HCCCEEEECC-CG-GGHHHHHHHHHHTTCSEEE
T ss_pred CCCCEEEEec-CH-HHHHHHHHHHHHCCCCEEE
Confidence 5699988443 23 6888999988876655533
No 333
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=64.65 E-value=6 Score=41.49 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=26.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||.|+|+|..|..+|..+++. | .+++++|++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-----G-------~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-----G-------ANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhc-----C-------CEEEEEECC
Confidence 4899999999999999998763 4 367888874
No 334
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=64.56 E-value=5.1 Score=40.57 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
...|||+|||.||+..|..|.+..... + .-++.++|+..-
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~-~------~~~v~liE~~~~ 69 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQ-G------ALEVLFLDKQGD 69 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHH-C------CCCEEEEESCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhccccc-C------cccEEEEecCCC
Confidence 347999999999999999997752110 0 046889998753
No 335
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=64.53 E-value=7.7 Score=41.94 Aligned_cols=37 Identities=11% Similarity=0.273 Sum_probs=30.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+++.+|||+|||.||+..|-.|.+. |+ ++.++|+.-.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-----G~-------~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-----GH-------DVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-----CC-------CEEEEcCCCC
Confidence 5578999999999999999888653 53 6899998843
No 336
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=64.31 E-value=12 Score=33.70 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=57.2
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCC-CCCHHHHhcc
Q 009982 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEP-VNNLLDAVKV 409 (521)
Q Consensus 333 riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~-~~~L~eav~~ 409 (521)
||+|.| +|-.|..+++.|++ .| .+++++++..- +...+ .+..+.. +..+ ..++.+++++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~-----~g-------~~V~~~~R~~~----~~~~~--~~~~~~~~D~~d~~~~~~~~~~~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLST-----TD-------YQIYAGARKVE----QVPQY--NNVKAVHFDVDWTPEEMAKQLHG 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTT-----SS-------CEEEEEESSGG----GSCCC--TTEEEEECCTTSCHHHHHTTTTT
T ss_pred eEEEECCCCHHHHHHHHHHHH-----CC-------CEEEEEECCcc----chhhc--CCceEEEecccCCHHHHHHHHcC
Confidence 688998 57777777777754 24 36888887531 11111 1111211 2222 3457777775
Q ss_pred cCCcEEEEccCCCCC--------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGVGRT--------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~~g~--------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+.... -+..++++|.+..-+.|||.=|
T Consensus 64 --~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 64 --MDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp --CSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred --CCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999987765421 1567889988776677888554
No 337
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=64.21 E-value=6.5 Score=36.76 Aligned_cols=35 Identities=31% Similarity=0.365 Sum_probs=23.1
Q ss_pred cccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 329 LAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 329 L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
|++.++||.||+ -.|..+|+.|++ .|. +++++|+.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 37 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLAR-----AGA-------NIVLNGFG 37 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHH-----TTC-------EEEEECSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 667889999984 445556555544 253 58888764
No 338
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=63.92 E-value=7.2 Score=36.60 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=23.8
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.++||.||+ -.|..+|+.+++ .| -+++++|++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 38 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVA-----AG-------ARVVLADVL 38 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH-----CC-------CEEEEEeCC
Confidence 4678899999974 445555555544 25 358888874
No 339
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=63.91 E-value=20 Score=36.59 Aligned_cols=137 Identities=7% Similarity=0.018 Sum_probs=86.8
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhC------CCcccce
Q 009982 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIG------GTLAEHR 333 (521)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g------~~L~d~r 333 (521)
+.+.+. +-.+| .++ |-+-.++ +.+.+.+.+|- ++||.| || +-=-+=+||=++.-.+..| ++|++.|
T Consensus 90 l~DTar-vls~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~g~~~~~~~~l~gl~ 163 (328)
T 3grf_A 90 VQDTAE-VFSRM-VDI-CTARLAT-KEMMREMAQHA-SVPCINALDD-FGHPLQMVCDFMTIKEKFTAAGEFSNGFKGIK 163 (328)
T ss_dssp HHHHHH-HHTTT-CSE-EEEECSS-HHHHHHHHHHC-SSCEEESSCS-SCCHHHHHHHHHHHHHHHHHTTCCTTTGGGCC
T ss_pred HHHHHH-HHHhh-CCE-EEEecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhCCccccccccCCcE
Confidence 334444 34456 554 3355554 45556666764 689998 55 4444567777777766666 3799999
Q ss_pred EEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc---c---CCCCCHHHHh
Q 009982 334 FLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE---H---EPVNNLLDAV 407 (521)
Q Consensus 334 iv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~---~---~~~~~L~eav 407 (521)
|.++|-+. + .+|+-++.++.+ .|+ +|.++-.+|+..+-..+ +.+.-+.++.. . ....++.|||
T Consensus 164 va~vGD~~-~-~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~p~~~-~~~~~~~~~~~~~~g~~v~~~~d~~eav 232 (328)
T 3grf_A 164 FAYCGDSM-N-NVTYDLMRGCAL-LGM-------ECHVCCPDHKDFKPIKE-VIDECEEIIAKHGTGGSIKIFHDCKKGC 232 (328)
T ss_dssp EEEESCCS-S-HHHHHHHHHHHH-HTC-------EEEEECCSSGGGSCCHH-HHHHHHHHHHHHTCCCEEEEESSHHHHH
T ss_pred EEEeCCCC-c-chHHHHHHHHHH-cCC-------EEEEECChHhhhCCCHH-HHHHHHHHHhhccCCCeEEEEcCHHHHh
Confidence 99999985 2 478888777766 364 68888888885311111 22222233322 1 1236899999
Q ss_pred cccCCcEEEE
Q 009982 408 KVIKPTILIG 417 (521)
Q Consensus 408 ~~vkptvLIG 417 (521)
++ +||+.-
T Consensus 233 ~~--aDvvyt 240 (328)
T 3grf_A 233 EG--VDVVYT 240 (328)
T ss_dssp TT--CSEEEE
T ss_pred cC--CCEEEe
Confidence 98 999974
No 340
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=63.84 E-value=8.7 Score=34.76 Aligned_cols=100 Identities=14% Similarity=0.074 Sum_probs=57.4
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHh
Q 009982 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAV 407 (521)
Q Consensus 330 ~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav 407 (521)
...+|+|.|| |-.|..+++.|++. |- ..++++++++. ++.+.+.. ...+.. +..+..++.+++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~-----~~-----g~~V~~~~r~~----~~~~~~~~-~~~~~~~D~~d~~~~~~~~ 67 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEG-----SD-----KFVAKGLVRSA----QGKEKIGG-EADVFIGDITDADSINPAF 67 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-----TT-----TCEEEEEESCH----HHHHHTTC-CTTEEECCTTSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhc-----CC-----CcEEEEEEcCC----CchhhcCC-CeeEEEecCCCHHHHHHHH
Confidence 4578999995 77788888877652 20 14688887742 11001100 111111 212224577888
Q ss_pred cccCCcEEEEccCCCCC----------------C-------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 408 KVIKPTILIGSSGVGRT----------------F-------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~----------------F-------------t~evv~~Ma~~~erPIIFaLS 446 (521)
+. +|++|=+.+.... | +..++++|.+..-+.|||.=|
T Consensus 68 ~~--~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 68 QG--IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp TT--CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred cC--CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 75 8999977664321 1 467788887665567888543
No 341
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=63.82 E-value=6.3 Score=39.05 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=25.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|+|+|||.+|+..|..|.+. | .++.++++..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA-----G-------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC-----C-------CceEEEeCCC
Confidence 699999999999999988763 5 3577777753
No 342
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=63.69 E-value=5.8 Score=40.98 Aligned_cols=34 Identities=21% Similarity=0.296 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+++|+|||.||+..|..+.+. | .++.++|++.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~~ 58 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQL-----G-------MKVAVVEKRS 58 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999888653 5 3689999754
No 343
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=63.51 E-value=6.2 Score=42.09 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=28.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~-----~g~-------~v~iiE~~~ 42 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ-----AGM-------KVLGIEAGE 42 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 45789999999999999999865 253 589999874
No 344
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=63.46 E-value=4.9 Score=37.62 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=23.2
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.++||.||+ -.|..+|+.+++ .|. +++++|++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G~-------~V~~~~r~ 39 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLG-----EGA-------KVAFSDIN 39 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 5778899999974 344445555543 252 58888764
No 345
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=63.33 E-value=6.5 Score=36.47 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+-+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-----g-------~~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-----G-------VRVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 45799999999999999888653 5 368888875
No 346
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=63.32 E-value=8.5 Score=40.93 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=22.2
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
++++.++||.|||.+|.++|..+++. |. +++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~-----G~-------~V~i~~R~ 396 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEK-----GA-------KVVIANRT 396 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHH-----CC--------CEEEESS
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHC-----CC-------EEEEEECC
Confidence 57788999999997777776666543 52 58888874
No 347
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=63.27 E-value=6 Score=37.64 Aligned_cols=32 Identities=22% Similarity=0.335 Sum_probs=25.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
--|+|+|||+||+..|..+.+. | .++.++|+.
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~-----g-------~~V~liE~~ 38 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRA-----N-------LKTVMIERG 38 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEecC
Confidence 3579999999999999777553 5 368888864
No 348
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=63.23 E-value=5.6 Score=40.93 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
++.++||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~~-----g-------~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQL-----G-------LKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 357899999999999999988652 4 3799999864
No 349
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.19 E-value=6.9 Score=39.96 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-----G-------FKTTCIEKRG 39 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 45799999999999999888663 5 3689999873
No 350
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=63.12 E-value=10 Score=34.51 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=40.1
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc-
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v- 410 (521)
++||.|| |-.|..+++.|++ .| .+++++|++. + .+.. .+.-+.....++.++++.+
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~-----~g-------~~V~~~~r~~----~---~~~~---~~~~D~~~~~~~~~~~~~~~ 60 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR-----AG-------HTVIGIDRGQ----A---DIEA---DLSTPGGRETAVAAVLDRCG 60 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESSS----S---SEEC---CTTSHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcHHHHHHHHHHHh-----CC-------CEEEEEeCCh----h---Hccc---cccCCcccHHHHHHHHHHcC
Confidence 6888887 6667777777654 25 3688888742 1 1211 1111111123466666654
Q ss_pred -CCcEEEEccCCC
Q 009982 411 -KPTILIGSSGVG 422 (521)
Q Consensus 411 -kptvLIG~S~~~ 422 (521)
++|++|=+.+..
T Consensus 61 ~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 61 GVLDGLVCCAGVG 73 (255)
T ss_dssp TCCSEEEECCCCC
T ss_pred CCccEEEECCCCC
Confidence 799999887754
No 351
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=63.06 E-value=3.8 Score=45.69 Aligned_cols=37 Identities=27% Similarity=0.462 Sum_probs=32.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
|++.||+|+|+|..|.-+|+.|+.+ |+ .+|.++|.+=
T Consensus 409 l~~~~vlvvG~GglG~~~~~~L~~~-----Gv------g~i~l~D~d~ 445 (805)
T 2nvu_B 409 LDTCKVLVIGAGGLGCELLKNLALS-----GF------RQIHVIDMDT 445 (805)
T ss_dssp HHTCCEEEECCSSHHHHHHHHHHTT-----TC------CEEEEEECCB
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHc-----CC------CcEEEECCCe
Confidence 3788999999999999999999875 75 7899999873
No 352
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=63.05 E-value=5.7 Score=46.26 Aligned_cols=38 Identities=24% Similarity=0.351 Sum_probs=34.0
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
++|++.||+++|+|..|.-||+.|+.+ |+ ++|.++|.+
T Consensus 23 ~rL~~s~VlIvG~GGlGseiak~La~a-----GV------g~itlvD~D 60 (1015)
T 3cmm_A 23 LKMQTSNVLILGLKGLGVEIAKNVVLA-----GV------KSMTVFDPE 60 (1015)
T ss_dssp HHHTTCEEEEECCSHHHHHHHHHHHHH-----CC------SEEEEECCS
T ss_pred HHHhcCEEEEECCChHHHHHHHHHHHc-----CC------CeEEEecCC
Confidence 357899999999999999999999986 75 789999986
No 353
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=62.96 E-value=6.2 Score=40.68 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~ 36 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-----G-------KRVALIESK 36 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-----C-------CcEEEEcCC
Confidence 46899999999999999988652 5 469999986
No 354
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=62.92 E-value=7.5 Score=38.24 Aligned_cols=99 Identities=21% Similarity=0.222 Sum_probs=55.4
Q ss_pred HHHHHHHHHH-HhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh
Q 009982 314 VLAGVVAALK-LIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP 392 (521)
Q Consensus 314 ~LAgll~Alk-~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~ 392 (521)
.++.-+.+++ ..+ - .+++++|.|||..|...+.+... .|. ++++.+|+. ..| +...++.
T Consensus 149 ~~~ta~~~l~~~~~-~-~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~l 208 (343)
T 2dq4_A 149 PFGNAVHTVYAGSG-V-SGKSVLITGAGPIGLMAAMVVRA-----SGA------GPILVSDPN----PYR---LAFARPY 208 (343)
T ss_dssp HHHHHHHHHHSTTC-C-TTSCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HGGGTTT
T ss_pred HHHHHHHHHHHhCC-C-CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHh
Confidence 3444456665 433 3 88999999999888877665533 353 468888763 111 1111221
Q ss_pred hcccc--CCCCCHHHHhcc---cCCcEEEEccCCCCCCCHHHHHHHH
Q 009982 393 WAHEH--EPVNNLLDAVKV---IKPTILIGSSGVGRTFTKEVIEAMA 434 (521)
Q Consensus 393 fa~~~--~~~~~L~eav~~---vkptvLIG~S~~~g~Ft~evv~~Ma 434 (521)
|... ....++.+.++. -+.|++|=+++.+ ...++.++.|+
T Consensus 209 -a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~~l~ 253 (343)
T 2dq4_A 209 -ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE-AAIHQGLMALI 253 (343)
T ss_dssp -CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH-HHHHHHHHHEE
T ss_pred -HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH-HHHHHHHHHHh
Confidence 2210 112356666653 2689998877632 23455666665
No 355
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=62.78 E-value=21 Score=37.51 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=31.8
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCHHHHhc
Q 009982 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTAEEAYT 461 (521)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectpe~A~~ 461 (521)
-+++|=.|+.+--.|+++.+... ++-++| ||.+.-|-.+..-..
T Consensus 146 g~iVV~~STv~pgtt~~l~~~l~---~~~v~~---sPe~~~~G~A~~~~l 189 (432)
T 3pid_A 146 NAVMIIKSTIPVGFTRDIKERLG---IDNVIF---SPEFLREGRALYDNL 189 (432)
T ss_dssp TSEEEECSCCCTTHHHHHHHHHT---CCCEEE---CCCCCCTTSHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHh---hccEee---cCccCCcchhhhccc
Confidence 45777788887667888887765 455665 999888888865543
No 356
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=62.43 E-value=18 Score=33.61 Aligned_cols=77 Identities=13% Similarity=0.207 Sum_probs=41.6
Q ss_pred CCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHH
Q 009982 326 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (521)
Q Consensus 326 g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (521)
..++++.++||.||+. .|..+|+.++ + .| -+++++|++- ++ +.... .+.-|..+..++.
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~----~-~G-------~~V~~~~r~~----~~---~~~~~-~~~~D~~~~~~~~ 69 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLA----A-DG-------HKVAVTHRGS----GA---PKGLF-GVEVDVTDSDAVD 69 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHH----H-TT-------CEEEEEESSS----CC---CTTSE-EEECCTTCHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHH----H-CC-------CEEEEEeCCh----HH---HHHhc-CeeccCCCHHHHH
Confidence 3467888999999743 3444555444 3 25 3588888742 11 21111 1211222223455
Q ss_pred HHhccc-----CCcEEEEccCCC
Q 009982 405 DAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 405 eav~~v-----kptvLIG~S~~~ 422 (521)
++++.+ ++|+||=..+..
T Consensus 70 ~~~~~~~~~~g~id~lv~~Ag~~ 92 (247)
T 1uzm_A 70 RAFTAVEEHQGPVEVLVSNAGLS 92 (247)
T ss_dssp HHHHHHHHHHSSCSEEEEECSCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 555544 689999877654
No 357
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=62.34 E-value=6.1 Score=42.17 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=28.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|||+|||.||+..|..|.+ .|+ ++.++|+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~-----~G~-------~v~iiE~~~ 54 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRS-----QGL-------TVRAFEAAS 54 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-----TTC-------CEEEECSSS
T ss_pred CCCCEEEECchHHHHHHHHHHHh-----CCC-------CEEEEeCCC
Confidence 35789999999999999999865 253 689999864
No 358
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=62.32 E-value=6.9 Score=39.08 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|+|+|||.+|+..|-.|.+. | .++.++|+..
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-----G-------~~V~vlE~~~ 33 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-----G-------HEIIVLEKSA 33 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 699999999999999988763 5 3577777753
No 359
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=61.98 E-value=4.4 Score=41.63 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=24.2
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
||.|+|+|..|..+|..+++ | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~La~------G-------~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL------Q-------NEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT------T-------SEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC------C-------CEEEEEECC
Confidence 79999999999999988753 3 358888874
No 360
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=61.97 E-value=6.9 Score=40.11 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=27.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-----G-------MKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 35799999999999999877653 5 3689999873
No 361
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=61.92 E-value=6.2 Score=38.13 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=61.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhc----------hhhcc-c
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 396 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k----------~~fa~-~ 396 (521)
+...+|+|.|| |-.|..+++.|++. | .+++.+|+..- .....+...+ ..+.. +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~D 87 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKL-----N-------QVVIGLDNFST---GHQYNLDEVKTLVSTEQWSRFCFIEGD 87 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCSS---CCHHHHHHHHHTSCHHHHTTEEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCCC---CchhhhhhhhhccccccCCceEEEEcc
Confidence 45679999996 88898888888653 5 36888887421 1101111111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
..+..++.++++ ++|++|=+.+.... -|..+++++.+..-+.+||.=|
T Consensus 88 l~d~~~~~~~~~--~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 88 IRDLTTCEQVMK--GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp TTCHHHHHHHTT--TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 122245778887 59999988875321 1334788888776678998633
No 362
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=61.83 E-value=6 Score=40.74 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..-
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~-----G~-------~V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKR-----GR-------RVLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCCCC
Confidence 46899999999999999888653 53 6889998654
No 363
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=61.74 E-value=6.4 Score=40.71 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=28.7
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.-
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-----G-------AKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-----S-------CCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 356899999999999999988763 5 4699999863
No 364
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=61.73 E-value=6.4 Score=40.11 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=26.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.||+..|-.|.+. |+ ++.++|++
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~-----G~-------~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH-----DV-------DVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT-----TC-------EEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----CC-------eEEEEcCC
Confidence 5799999999999999888763 64 68888875
No 365
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=61.67 E-value=5.6 Score=38.34 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=26.9
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...+|+|+|||.||+..|..+.+. |+ ++.++|+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-----g~-------~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-----QL-------APLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEecC
Confidence 346899999999999999988653 53 57788854
No 366
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=61.61 E-value=8.7 Score=36.81 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=59.3
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh------chhhcc-ccCCCCC
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF------KKPWAH-EHEPVNN 402 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~------k~~fa~-~~~~~~~ 402 (521)
..+|+|.|| |-.|..+++.|++. | .+++++|+..- ...+.+... +..+.. +..+..+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~-----G-------~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 69 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH-----G-------YDVVIADNLVN---SKREAIARIEKITGKTPAFHETDVSDERA 69 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCSS---SCTHHHHHHHHHHSCCCEEECCCTTCHHH
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC-----C-------CcEEEEecCCc---chHHHHHHHHhhcCCCceEEEeecCCHHH
Confidence 468999985 77788888777652 5 36888876421 000001100 001111 1122245
Q ss_pred HHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 403 LLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 403 L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+.++++..++|++|=+.+.... -|..+++.|.+..-+.|||.=|
T Consensus 70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 70 LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 7788886689999987765421 1346778888776678998544
No 367
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=61.55 E-value=6.2 Score=37.22 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=24.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.||+..|..+.+. |. ++.+++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g~-------~v~li~~~ 33 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARK-----GI-------RTGLMGER 33 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCC
Confidence 4799999999999999887652 53 56677653
No 368
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=61.54 E-value=7.2 Score=40.51 Aligned_cols=109 Identities=13% Similarity=0.044 Sum_probs=62.7
Q ss_pred cceEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEe--cCCc---cccCCccCCchhchhhccccCCCCCHH
Q 009982 331 EHRFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVD--SKGL---IVSSRKDSLQHFKKPWAHEHEPVNNLL 404 (521)
Q Consensus 331 d~riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvD--s~GL---i~~~R~~~l~~~k~~fa~~~~~~~~L~ 404 (521)
..||.|+| ||..|..+|-.|+.. ++-- |. ..+.|+| .... +.-...| |.+-..+|.+...-..+..
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~-----~l~~-e~-~~l~L~d~d~~~~~~~~~G~amD-L~h~~~p~~~~v~i~~~~y 103 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASG-----EVFG-QD-QPIALKLLGSERSFQALEGVAME-LEDSLYPLLREVSIGIDPY 103 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT-----TTTC-TT-CCEEEEEECCGGGHHHHHHHHHH-HHTTTCTTEEEEEEESCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcC-----CcCC-CC-ceeEEEecCccchhhhhHHHHHh-HHhhhhhhcCCcEEecCCH
Confidence 36999999 799999998887653 4411 11 1255544 3210 0000011 3333334443222224678
Q ss_pred HHhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcC-CCCcEEEEcCCCC
Q 009982 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASF-NEKPLILALSNPT 449 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~-~erPIIFaLSNPt 449 (521)
+++++ .|++|=+.+.+ |- +=+++++.++++ +..-||+-.|||.
T Consensus 104 ~~~~d--aDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 104 EVFED--VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 88888 99887554433 31 123555667776 7899999999995
No 369
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=61.51 E-value=5.5 Score=41.15 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=26.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
.+|||+|||.||...|-.|.+... .| -++.++|+.-.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~--~G-------~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFD--DR-------IDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHG--GG-------SEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEEecCCC
Confidence 479999999999999999977431 14 36888988643
No 370
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=61.46 E-value=3.5 Score=43.48 Aligned_cols=32 Identities=19% Similarity=0.369 Sum_probs=25.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.||||+|+|.||+..|+.|.. .+ -+|.|+|++
T Consensus 43 prVVIIGgG~AGl~~A~~L~~-----~~-------~~VtLId~~ 74 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDT-----KK-------YNVSIISPR 74 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCT-----TT-------CEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHhhh-----CC-------CcEEEECCC
Confidence 489999999999999877632 12 369999985
No 371
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=61.40 E-value=6.9 Score=41.01 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=27.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+.+|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 44 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG-----GV-------DVMVLEQL 44 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEECC
Confidence 567899999999999999988763 65 46677764
No 372
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=61.07 E-value=7.1 Score=41.27 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..+|||+|||.||...|..|.+... .| -+|.++|+.-.
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQ--GT-------ADITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTT--TS-------SEEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcC--CC-------CcEEEEeCCCC
Confidence 4689999999999999999877420 14 36899998643
No 373
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=61.03 E-value=9.5 Score=36.99 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=58.8
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhc----------hhhcc-c
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFK----------KPWAH-E 396 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k----------~~fa~-~ 396 (521)
++..+|+|.|| |-.|..+++.|++. | .+++.+|+.- ....+.+...+ ..+.. +
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~D 89 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKL-----D-------QKVVGLDNFA---TGHQRNLDEVRSLVSEKQWSNFKFIQGD 89 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCS---SCCHHHHHHHHHHSCHHHHTTEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHC-----C-------CEEEEEeCCC---ccchhhHHHHhhhcccccCCceEEEECC
Confidence 45678999998 88888888887652 4 3688888742 11101121111 11111 1
Q ss_pred cCCCCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 397 HEPVNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 397 ~~~~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
..+..++.++++ ++|++|=+.+..+. -|..+++++.+..-+.|||.=|
T Consensus 90 l~d~~~~~~~~~--~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 90 IRNLDDCNNACA--GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp TTSHHHHHHHHT--TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCCHHHHHHHhc--CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 112235777787 59999998875431 1345667776655566887543
No 374
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=60.97 E-value=6.6 Score=40.19 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=27.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.+|+|+|||.||+..|..+.+. |. ++.++|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-----G~-------~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-----GL-------STAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCC
Confidence 45799999999999999887653 53 68999986
No 375
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=60.94 E-value=7.6 Score=36.43 Aligned_cols=87 Identities=17% Similarity=0.207 Sum_probs=55.0
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
-...+|+|.|| |-.|..+++.|++ .| .+++.+|+. ..| +. +..++.+++
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~-----~g-------~~V~~~~r~------~~D-l~-----------d~~~~~~~~ 59 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKG-----KN-------VEVIPTDVQ------DLD-IT-----------NVLAVNKFF 59 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTT-----SS-------EEEEEECTT------TCC-TT-----------CHHHHHHHH
T ss_pred cccceEEEECCCChHHHHHHHHHHh-----CC-------CeEEeccCc------cCC-CC-----------CHHHHHHHH
Confidence 34578888887 7888888887754 24 368888774 111 21 113577778
Q ss_pred cccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 408 KVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+.+++|++|=+.+.... -+..+++++.+..- .|||.=|
T Consensus 60 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS 113 (292)
T 1vl0_A 60 NEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQIST 113 (292)
T ss_dssp HHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred HhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEech
Confidence 76679999988875421 03556777765544 7888654
No 376
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=60.93 E-value=8.4 Score=40.24 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=28.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
.+|||+|||.||+..|..|.+. |- ..+|.++|+..-
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~-----~~-----~~~V~lie~~~~ 37 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL-----SE-----TAEIIMFERGEY 37 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-----CS-----SSEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhh-----Cc-----CCCEEEEECCCC
Confidence 4899999999999999988663 21 247889988754
No 377
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=60.93 E-value=6.9 Score=39.64 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=27.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|||+|||.||+..|..|.+. . .| .++.++|+.-
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~--~-~g-------~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL--M-PD-------LKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH--C-TT-------CEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcC--C-CC-------CeEEEECCCC
Confidence 5899999999999999998762 0 12 4688888764
No 378
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=60.90 E-value=7 Score=40.42 Aligned_cols=65 Identities=12% Similarity=0.157 Sum_probs=28.9
Q ss_pred ccCCCchHHHHHHHHHHHHHH---hCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 304 NDDIQGTASVVLAGVVAALKL---IGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 304 nDDiQGTaaV~LAgll~Alk~---~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
|...||-|+++.---+.--.. ...+....+|||+|||.||+..|..+.+.. .| .++.++|+....
T Consensus 6 ~~~~~~~~~~~~np~~g~~~~~~~~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~~ 73 (480)
T 3cgb_A 6 HHHHHGMASMTGGQQMGRTLYDDDDKDRWGSMNYVIIGGDAAGMSAAMQIVRND---EN-------ANVVTLEKGEIY 73 (480)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEECSSSCC
T ss_pred cccccccccccchhhhcccccCCCCcCccccceEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCCC
Confidence 344567776655444432211 111112258999999999999999887631 12 479999987543
No 379
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=60.89 E-value=19 Score=35.09 Aligned_cols=108 Identities=23% Similarity=0.234 Sum_probs=57.6
Q ss_pred CCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccc---cCCccCCch------hchhhcc-
Q 009982 327 GTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIV---SSRKDSLQH------FKKPWAH- 395 (521)
Q Consensus 327 ~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~---~~R~~~l~~------~k~~fa~- 395 (521)
.+++..+|+|.|| |-.|..+++.|++.- .| .+++.+|+..--. ..+.+.+.. .+..+..
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~---~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENH---PK-------AKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAA 75 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHC---TT-------SEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEEC
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhC---CC-------CeEEEEECCCccccccccchhhhhhhhhccccCceEEEC
Confidence 3577889999976 888888888876520 14 4788888743100 000001111 1111111
Q ss_pred ccCCCCCHHHHhcccCCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 396 EHEPVNNLLDAVKVIKPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 396 ~~~~~~~L~eav~~vkptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+..+..++.++ ...++|++|=+.+.... -|..+++++.+..-+ |||.=|
T Consensus 76 Dl~d~~~~~~~-~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS 138 (362)
T 3sxp_A 76 DINNPLDLRRL-EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASS 138 (362)
T ss_dssp CTTCHHHHHHH-TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEE
T ss_pred CCCCHHHHHHh-hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCc
Confidence 11111235554 23479999987764321 124567777665555 888655
No 380
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=60.88 E-value=7 Score=40.97 Aligned_cols=37 Identities=22% Similarity=0.383 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|-.|.+... .| -++.++|+.-
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~--~G-------~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQ--QQ-------ANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCC--SS-------CEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcC--CC-------CEEEEECCCC
Confidence 4689999999999999998876310 24 3689999854
No 381
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=60.87 E-value=9.3 Score=38.88 Aligned_cols=37 Identities=16% Similarity=0.285 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..+|||+|||.||+..|..|.+. +- ..++.++|+..-
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~-----~~-----~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL-----KP-----EWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CT-----TSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh-----Cc-----CCCEEEEECCCc
Confidence 46899999999999999988664 11 136888887653
No 382
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=60.82 E-value=7 Score=38.53 Aligned_cols=119 Identities=14% Similarity=0.050 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh
Q 009982 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW 393 (521)
Q Consensus 314 ~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f 393 (521)
.++.-+.|++..+. ..++|+|.|||..|..++.++.. .|. ++++.+|+. ..| +...++.=
T Consensus 153 ~~~ta~~~l~~~~~--~g~~VlV~GaG~vG~~~~q~a~~-----~Ga------~~Vi~~~~~----~~~---~~~~~~~G 212 (348)
T 2d8a_A 153 PLGNAVDTVLAGPI--SGKSVLITGAGPLGLLGIAVAKA-----SGA------YPVIVSEPS----DFR---RELAKKVG 212 (348)
T ss_dssp HHHHHHHHHTTSCC--TTCCEEEECCSHHHHHHHHHHHH-----TTC------CSEEEECSC----HHH---HHHHHHHT
T ss_pred HHHHHHHHHHhcCC--CCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECCC----HHH---HHHHHHhC
Confidence 33334555643333 88999999999888887766543 353 368877763 111 11111100
Q ss_pred ccc--cCCCCCHHHHhcc----cCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcCCCCCCCCCCH
Q 009982 394 AHE--HEPVNNLLDAVKV----IKPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALSNPTSQSECTA 456 (521)
Q Consensus 394 a~~--~~~~~~L~eav~~----vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLSNPt~~~Ectp 456 (521)
|.. .....++.+.++. -+.|++|=+++.+ ...++.++.|+. .=.|.-++.+....+..+
T Consensus 213 a~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~~l~~---~G~iv~~g~~~~~~~~~~ 277 (348)
T 2d8a_A 213 ADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAP-KALEQGLQAVTP---AGRVSLLGLYPGKVTIDF 277 (348)
T ss_dssp CSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCH-HHHHHHHHHEEE---EEEEEECCCCSSCCCCCH
T ss_pred CCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCH-HHHHHHHHHHhc---CCEEEEEccCCCCcccCc
Confidence 110 0111356655543 2579998777632 234556666653 223444444443344444
No 383
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=60.73 E-value=9.7 Score=42.34 Aligned_cols=33 Identities=33% Similarity=0.336 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
=.||.|+|+|..|.+||..++.+ |. +++++|..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-----G~-------~V~l~D~~ 346 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-----GT-------PILMKDIN 346 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-----TC-------CEEEECSS
T ss_pred CCEEEEECCChhhHHHHHHHHhC-----CC-------EEEEEECC
Confidence 35799999999999999998764 54 57888864
No 384
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=60.50 E-value=38 Score=34.75 Aligned_cols=134 Identities=19% Similarity=0.235 Sum_probs=83.3
Q ss_pred HHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCcchH
Q 009982 265 FMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEA 342 (521)
Q Consensus 265 fv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsA 342 (521)
.++ +-.+| .++++ +--++ +.+.+.|.+|- ++||.| || .-=-+=+||=++.-.+..| +|++.||+++|-+.
T Consensus 118 Tar-vLs~y-~D~Iv-iR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~TI~E~~G-~l~glkva~vGD~~- 189 (340)
T 4ep1_A 118 TAK-VLSHY-IDGIM-IRTFS-HADVEELAKES-SIPVINGLTD-DHHPCQALADLMTIYEETN-TFKGIKLAYVGDGN- 189 (340)
T ss_dssp HHH-HHHHH-CSEEE-EECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHHHS-CCTTCEEEEESCCC-
T ss_pred HHH-HHHHh-CCEEE-EecCC-hhHHHHHHHhC-CCCEEeCCCC-CCCcHHHHHHHHHHHHHhC-CCCCCEEEEECCCc-
Confidence 344 33456 55444 55554 35556666664 689998 54 3334556777776666655 59999999999982
Q ss_pred HHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHHHHhcccCCcEEEEc
Q 009982 343 GTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTILIGS 418 (521)
Q Consensus 343 g~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~eav~~vkptvLIG~ 418 (521)
-+|+-++.++.+ .|+ +|.++-.+|+.-.. + +-..-+.+|+.. ....++.|||++ +||+.-.
T Consensus 190 --nva~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~G~~v~~~~d~~eav~~--aDVvyt~ 254 (340)
T 4ep1_A 190 --NVCHSLLLASAK-VGM-------HMTVATPVGYRPNE--E-IVKKALAIAKETGAEIEILHNPELAVNE--ADFIYTD 254 (340)
T ss_dssp --HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHCCCEEEESCHHHHHTT--CSEEEEC
T ss_pred --hhHHHHHHHHHH-cCC-------EEEEECCcccCCCH--H-HHHHHHHHHHHcCCeEEEECCHHHHhCC--CCEEEec
Confidence 378888777766 364 68888888774321 1 111122233221 123689999998 9999876
Q ss_pred cCC
Q 009982 419 SGV 421 (521)
Q Consensus 419 S~~ 421 (521)
.=+
T Consensus 255 ~w~ 257 (340)
T 4ep1_A 255 VWM 257 (340)
T ss_dssp CC-
T ss_pred Ccc
Confidence 543
No 385
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=60.40 E-value=8.4 Score=39.13 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHH
Q 009982 331 EHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
+.-|||+|||-||+..|..|.++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~ 32 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQI 32 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhh
Confidence 35699999999999999988764
No 386
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=60.35 E-value=4.8 Score=39.07 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=26.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.+|+.+|..|.+.. ..| .++.++|+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~--~~G-------~~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT--SGP-------LYLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC---CC-------EEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc--cCC-------ceEEEEECC
Confidence 37999999999999999886510 024 368888875
No 387
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=60.34 E-value=6.1 Score=40.83 Aligned_cols=31 Identities=23% Similarity=0.297 Sum_probs=25.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
||.|+|+|..|..+|..+++. | .+++++|++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-----G-------~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-----G-------HEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-----T-------CEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEECC
Confidence 799999999999999988763 5 358888874
No 388
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=60.17 E-value=6.8 Score=36.51 Aligned_cols=77 Identities=25% Similarity=0.344 Sum_probs=44.0
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhc-------cccC
Q 009982 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWA-------HEHE 398 (521)
Q Consensus 327 ~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa-------~~~~ 398 (521)
.++++.++||.||+. .|..+|+.+++ .| -+++++|++- +.+...++.+. -+..
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~D~~ 65 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAK-----GG-------AKVVIVDRDK-------AGAERVAGEIGDAALAVAADIS 65 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TT-------CEEEEEESCH-------HHHHHHHHHHCTTEEEEECCTT
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHH-----CC-------CEEEEEcCCH-------HHHHHHHHHhCCceEEEEecCC
Confidence 467889999999864 35556665554 25 3688888741 11222211111 1112
Q ss_pred CCCCHHHHhccc-----CCcEEEEccCCC
Q 009982 399 PVNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 399 ~~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
+..++.++++.+ ++|+||=..+..
T Consensus 66 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 94 (261)
T 3n74_A 66 KEADVDAAVEAALSKFGKVDILVNNAGIG 94 (261)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 223456666655 799999877653
No 389
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=60.14 E-value=4.2 Score=40.68 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=54.0
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
+....||.|+|+|..|...++.+... ..|. +-+.++|++ .++ .....+.|-.......++.|++
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~---~~~~------~lvav~d~~----~~~---~~~~a~~~g~~~~~~~~~~~ll 83 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANT---VSGV------EVVAVCDIV----AGR---AQAALDKYAIEAKDYNDYHDLI 83 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHT---CTTE------EEEEEECSS----TTH---HHHHHHHHTCCCEEESSHHHHH
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhh---CCCc------EEEEEEeCC----HHH---HHHHHHHhCCCCeeeCCHHHHh
Confidence 34457999999999887766655421 1121 224467763 111 2222223311112247899999
Q ss_pred cccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009982 408 KVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (521)
Q Consensus 408 ~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (521)
+.-++|+++ ++++. .+..++++...+. .++|+.
T Consensus 84 ~~~~~D~V~-i~tp~-~~h~~~~~~al~a-Gk~Vl~ 116 (357)
T 3ec7_A 84 NDKDVEVVI-ITASN-EAHADVAVAALNA-NKYVFC 116 (357)
T ss_dssp HCTTCCEEE-ECSCG-GGHHHHHHHHHHT-TCEEEE
T ss_pred cCCCCCEEE-EcCCc-HHHHHHHHHHHHC-CCCEEe
Confidence 987899988 55544 5666666655443 356654
No 390
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=60.14 E-value=7.2 Score=41.13 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=28.6
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|||+|||.||+..|..|.+. |+ ++.++|+..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-----G~-------~v~iiE~~~ 49 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-----GR-------SVHVIETAG 49 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-----CC-------CEEEEeCCC
Confidence 356899999999999999988763 54 688998864
No 391
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=60.12 E-value=14 Score=36.36 Aligned_cols=89 Identities=24% Similarity=0.375 Sum_probs=48.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
+||-|+|-|..|.++|+.|++. |. +++++|+. .++.+.+.. .-+ ....++.|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~-----G~-------~V~v~dr~----~~~~~~l~~---~G~---~~~~s~~e~~~~-- 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA-----GY-------ELVVWNRT----ASKAEPLTK---LGA---TVVENAIDAITP-- 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-----TC-------EEEEC-----------CTTTT---TTC---EECSSGGGGCCT--
T ss_pred CcEEEEecHHHHHHHHHHHHHC-----CC-------eEEEEeCC----HHHHHHHHH---cCC---eEeCCHHHHHhc--
Confidence 5899999999999999999764 53 57777762 332222211 111 123567777765
Q ss_pred CcEEEEccCCCC----CCCHHHHHHHHcCCCCcEEEEcCC
Q 009982 412 PTILIGSSGVGR----TFTKEVIEAMASFNEKPLILALSN 447 (521)
Q Consensus 412 ptvLIG~S~~~g----~Ft~evv~~Ma~~~erPIIFaLSN 447 (521)
.|++|=+-..+. ++..+++..+. +.-||.=+|+
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~---~~~iiid~sT 98 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLG---KDGVHVSMST 98 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHC---TTCEEEECSC
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcC---CCeEEEECCC
Confidence 666664322111 22333444442 3446666665
No 392
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.90 E-value=8.9 Score=39.98 Aligned_cols=38 Identities=21% Similarity=0.338 Sum_probs=29.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
...+|||+|||.||+..|..|.+. +. ..+|.++|+..-
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~-----~~-----g~~V~lie~~~~ 47 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRAR-----DP-----GARVLIVSEDPE 47 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHH-----ST-----TCEEEEEESSSS
T ss_pred CcCCEEEECChHHHHHHHHHHHhc-----CC-----CCeEEEEeCCCC
Confidence 346899999999999999988653 21 257999998753
No 393
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=59.89 E-value=7.1 Score=40.65 Aligned_cols=34 Identities=21% Similarity=0.411 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.-.|||+|||.+|+++|..+.+. |+ ++.++|+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-----G~-------~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-----GL-------SVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----CC-------CEEEEECCC
Confidence 45799999999999999988763 64 588999864
No 394
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=59.89 E-value=7 Score=39.72 Aligned_cols=36 Identities=19% Similarity=0.360 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|||+|||.||+..|..|.+.+.. | .+|.++|+.-
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~--g-------~~Vtlie~~~ 40 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGS--G-------HEVTLISAND 40 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGG--G-------SEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCC--c-------CEEEEEeCCC
Confidence 5899999999999999999774311 2 3677777654
No 395
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=59.82 E-value=6.9 Score=41.07 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 76 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAM-----G-------GRQLIVDRWP 76 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCC
Confidence 46899999999999999988763 5 3689999875
No 396
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=59.80 E-value=5.6 Score=37.25 Aligned_cols=83 Identities=23% Similarity=0.347 Sum_probs=54.5
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
||+|.|| |-.|..+++.|++. | .+++.+|+. ..| +. +..++.++++..+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~------~~D-~~-----------d~~~~~~~~~~~~ 56 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPE-----E-------YDIYPFDKK------LLD-IT-----------NISQVQQVVQEIR 56 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTT-----T-------EEEEEECTT------TSC-TT-----------CHHHHHHHHHHHC
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----C-------CEEEEeccc------ccC-CC-----------CHHHHHHHHHhcC
Confidence 7999996 88888888877542 4 368888871 111 21 1235778888778
Q ss_pred CcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 412 PTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 412 ptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+.+.... -+..+++++.+..- .+||.=|
T Consensus 57 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS 106 (287)
T 3sc6_A 57 PHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYIST 106 (287)
T ss_dssp CSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred CCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 9999988765431 03457777766554 4887544
No 397
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=59.68 E-value=6.8 Score=37.73 Aligned_cols=36 Identities=22% Similarity=0.246 Sum_probs=29.9
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.++||+|+|..|..-++.|+++ | -++.++|.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~-----G-------A~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQE-----G-------AAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGG-----C-------CCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHC-----C-------CEEEEECCC
Confidence 57889999999999999999988764 4 368888864
No 398
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=59.62 E-value=20 Score=33.39 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=39.9
Q ss_pred CcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh------hcc-ccCC
Q 009982 328 TLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP------WAH-EHEP 399 (521)
Q Consensus 328 ~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~------fa~-~~~~ 399 (521)
+|++.++||-||+. .|.++|+.+++ .|. +++++|++- .+ +....+. +.. |..+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~~----~~---~~~~~~~~~~~~~~~~~Dv~~ 64 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQ-----EGA-------TVLGLDLKP----PA---GEEPAAELGAAVRFRNADVTN 64 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TTC-------EEEEEESSC----C---------------CEEEECCTTC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHH-----CCC-------EEEEEeCCh----HH---HHHHHHHhCCceEEEEccCCC
Confidence 57788999999853 34445555543 353 588888742 11 1111111 111 2122
Q ss_pred CCCHHHHhccc-----CCcEEEEccCCC
Q 009982 400 VNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 400 ~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
..++.++++.+ +.|+||=..+..
T Consensus 65 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 65 EADATAALAFAKQEFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 23455566544 799999776543
No 399
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=59.61 E-value=7.2 Score=40.90 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=27.2
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
-.+..|+|+|||.+|+..|-.|.+. |+ ++.++|++
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-----G~-------~v~vlE~~ 43 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-----GV-------EVVVLERL 43 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESC
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCC
Confidence 3457899999999999999988763 65 46667654
No 400
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=59.59 E-value=6.2 Score=37.22 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=24.3
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.|+|+|||+||+..|..+.+. |+ ++.++|+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~-----g~-------~v~liE~~ 36 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRS-----SL-------KPVMYEGF 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-----TC-------CCEEECCS
T ss_pred cEEEECCCHHHHHHHHHHHHC-----CC-------CEEEEecC
Confidence 589999999999998776542 53 57788864
No 401
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=59.58 E-value=7.6 Score=39.62 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
-+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~~ 34 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQL-----G-------MKVGVVEKEK 34 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred CCEEEECCChhHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 4799999999999999887653 5 3689999873
No 402
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=59.57 E-value=8.3 Score=39.97 Aligned_cols=37 Identities=19% Similarity=0.352 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|..+.+. |. ...++.++|+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~-----g~----~~~~V~lie~~~ 71 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTN-----YG----DANEIVVFDQNS 71 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----HG----GGSEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-----CC----CCCeEEEEECCC
Confidence 46899999999999999999764 20 124789999864
No 403
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=59.39 E-value=10 Score=39.57 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEe
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (521)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 38 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATL----YG-------KRVAVVD 38 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred ccCEEEECCChhHHHHHHHHHHh----cC-------CeEEEEe
Confidence 46899999999999999998761 15 4689999
No 404
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=59.34 E-value=8.1 Score=40.45 Aligned_cols=36 Identities=31% Similarity=0.427 Sum_probs=28.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..+|+|+|||.||+..|..+.+. |+ ++.++|+..-+
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~-----G~-------~V~liEk~~~~ 127 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALL-----GA-------RVVLVEKRIKF 127 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-----TC-------EEEEEESCSSC
T ss_pred CCCEEEECccHHHHHHHHHHHHC-----CC-------eEEEEEecccc
Confidence 56899999999999999888653 63 68889886443
No 405
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=59.27 E-value=8.9 Score=41.82 Aligned_cols=34 Identities=24% Similarity=0.450 Sum_probs=28.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~-----G-------~~V~liE~~~ 424 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVR-----G-------YDVVLAEAGR 424 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----T-------CEEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 46899999999999999998764 5 3699999863
No 406
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=59.24 E-value=8.6 Score=39.24 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=28.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..+|||+|||.||+..|..+.+. |. ..+|.++|+..-
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-----g~-----~~~V~lie~~~~ 40 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-----GW-----EGNIRLVGDATV 40 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-----TC-----CSEEEEECSCCS
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-----Cc-----CCCEEEEECCCC
Confidence 36899999999999999988653 54 137899987643
No 407
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=59.12 E-value=7.7 Score=39.82 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.++||+|||.||+..|..+.+. | .++.++|+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 39 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-----G-------FKTVCIEKNE 39 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEeCCC
Confidence 35799999999999999988653 5 3699999874
No 408
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=59.07 E-value=6.9 Score=38.89 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=26.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.++||+|||.||+..|..+.+. |. .-++.++|+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-----DG-----ETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-----CS-----SSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhh-----CC-----CCCEEEEECC
Confidence 36799999999999999888653 53 2357777764
No 409
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=58.92 E-value=8.2 Score=38.25 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=24.7
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|+|+|||.||+..|-.|.+. ..| .++.++|+.
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~---~~G-------~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQA---RPL-------WAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHH---CTT-------SEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhc---CCC-------CCEEEEECC
Confidence 699999999999999888763 014 256677764
No 410
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=58.90 E-value=11 Score=36.26 Aligned_cols=81 Identities=12% Similarity=0.202 Sum_probs=45.8
Q ss_pred CCCcccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh-----hc-cc
Q 009982 326 GGTLAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-----WA-HE 396 (521)
Q Consensus 326 g~~L~d~riv~~GAG---sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~-----fa-~~ 396 (521)
..+|+++++||.||+ -.|.+||+.+++. |. +++++|+.. ...+.+....+. +. -|
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~-----G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~D 88 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQ-----GA-------EVALTYLSE----TFKKRVDPLAESLGVKLTVPCD 88 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHT-----TC-------EEEEEESSG----GGHHHHHHHHHHHTCCEEEECC
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHC-----CC-------EEEEEeCCh----HHHHHHHHHHHhcCCeEEEEcC
Confidence 346888999999996 4555577777653 53 588888752 111111111111 11 12
Q ss_pred cCCCCCHHHHhccc-----CCcEEEEccCCC
Q 009982 397 HEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 397 ~~~~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
..+..++.++++.+ +.|+||=..+..
T Consensus 89 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 89 VSDAESVDNMFKVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 12223455566554 799999777654
No 411
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=58.88 E-value=7.9 Score=36.90 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=24.6
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.--++|+|||+||+..|-.+.+ .| .++.++|+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar-----~g-------~~v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGR-----AR-------KQIALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-----TT-------CCEEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHH-----CC-------CCEEEEeCC
Confidence 3458999999999988865543 25 468889874
No 412
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=58.85 E-value=6.6 Score=40.26 Aligned_cols=33 Identities=21% Similarity=0.426 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-----G-------QKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-----T-------CCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEcCC
Confidence 46899999999999999988652 4 479999986
No 413
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=58.75 E-value=9.3 Score=40.44 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=30.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
...+|||+|||.||+..|..|.+.. .| .+|.++|+..-+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~~ 73 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLS---EE-------DEIIMVERGEYI 73 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSCS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhC---cC-------CCEEEEECCCCc
Confidence 3478999999999999999887641 12 478899987643
No 414
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=58.63 E-value=8.7 Score=38.54 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=27.0
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..|||+|||.+|+.+|-.|.+.. -| .++.++|+.
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~---pG-------~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLA---PG-------RSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC---TT-------SCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcC---CC-------CeEEEEeCC
Confidence 57999999999999999887530 04 368899975
No 415
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=58.47 E-value=14 Score=36.44 Aligned_cols=49 Identities=22% Similarity=0.195 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 314 VLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 314 ~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
.++.-+.|++..+. -..++|+|+|||+.|...+.+... .|. ++++.+|+
T Consensus 156 ~~~ta~~al~~~~~-~~g~~VlV~GaG~vG~~aiqlak~-----~Ga------~~Vi~~~~ 204 (356)
T 1pl8_A 156 PLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKA-----MGA------AQVVVTDL 204 (356)
T ss_dssp HHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHH-----TTC------SEEEEEES
T ss_pred hHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHH-----cCC------CEEEEECC
Confidence 33444555654443 246899999999888776655432 363 47888875
No 416
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=58.35 E-value=8.9 Score=39.15 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=28.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
.+|||+|||.||+..|..|.+.. .| .++.++|+.--
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~---~g-------~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY---PQ-------AEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC---SS-------SEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCCC
Confidence 48999999999999999987641 12 47888887653
No 417
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=58.28 E-value=6.7 Score=41.78 Aligned_cols=36 Identities=14% Similarity=0.085 Sum_probs=28.5
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|||+|||.||+..|..|.+ +.|+ ++.++|+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~----~~G~-------~v~viE~~~ 42 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHH----ELGL-------TTVGFDKAD 42 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH----TTCC-------CEEEEESSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHH----cCCC-------CEEEEECCC
Confidence 35689999999999999988862 1353 689999864
No 418
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=58.27 E-value=9.5 Score=36.99 Aligned_cols=37 Identities=24% Similarity=0.210 Sum_probs=27.1
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhh-cCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEET-RKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA-~~~i~lvDs~G 376 (521)
.|+|+|||.+|+.+|-.|.+. |.+. . ..++.++|+.-
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-----G~~~--~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-----YHSV--LQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-----HTTT--SSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHh-----cccc--CCCceEEEEECCC
Confidence 589999999999999888764 3100 0 14789999873
No 419
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=58.14 E-value=8.9 Score=37.81 Aligned_cols=105 Identities=18% Similarity=0.226 Sum_probs=61.1
Q ss_pred CCCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCC----chhchhhc-cccCC
Q 009982 326 GGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSL----QHFKKPWA-HEHEP 399 (521)
Q Consensus 326 g~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l----~~~k~~fa-~~~~~ 399 (521)
...+++.+|+|.|| |..|..+++.|++. .|. .+++++|++-- +...+ ...+..+. -+..+
T Consensus 16 ~~~~~~k~vlVTGatG~iG~~l~~~L~~~----~g~------~~V~~~~r~~~----~~~~~~~~~~~~~v~~~~~Dl~d 81 (344)
T 2gn4_A 16 QNMLDNQTILITGGTGSFGKCFVRKVLDT----TNA------KKIIVYSRDEL----KQSEMAMEFNDPRMRFFIGDVRD 81 (344)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHH----CCC------SEEEEEESCHH----HHHHHHHHHCCTTEEEEECCTTC
T ss_pred HHhhCCCEEEEECCCcHHHHHHHHHHHhh----CCC------CEEEEEECChh----hHHHHHHHhcCCCEEEEECCCCC
Confidence 34577889999996 88999998888653 142 47888887411 00001 00011111 12122
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCC----C------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 400 VNNLLDAVKVIKPTILIGSSGVGRT----F------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~----F------------t~evv~~Ma~~~erPIIFaLS 446 (521)
..++.++++. +|++|=+.+.... . |..+++++.+..-+-|||.=|
T Consensus 82 ~~~l~~~~~~--~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS 142 (344)
T 2gn4_A 82 LERLNYALEG--VDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALST 142 (344)
T ss_dssp HHHHHHHTTT--CSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHhc--CCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC
Confidence 2457777874 9999988876531 0 234666666655567888544
No 420
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.10 E-value=7.3 Score=39.77 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=26.7
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|||+|||.||+..|..+.+. | .++.++|+.
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~-----g-------~~V~lie~~ 35 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQL-----G-------QKVTIVEKG 35 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 4799999999999999887653 5 369999986
No 421
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=58.09 E-value=8.7 Score=39.46 Aligned_cols=35 Identities=31% Similarity=0.358 Sum_probs=28.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+..++|+|||.||+..|..+.+. | .++.++|++.-
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-----G-------~~V~liEk~~~ 38 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-----K-------YNVLMADPKGE 38 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECTTSS
T ss_pred cceEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECCCC
Confidence 35799999999999999888653 5 36899996553
No 422
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=58.01 E-value=7.2 Score=40.69 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=27.7
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..|+|+|||.||+..|-.|.+. |+ ++.++|++-
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~-----G~-------~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQ-----GV-------RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTT-----TC-------CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 46899999999999999888653 64 588888764
No 423
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=57.87 E-value=32 Score=32.33 Aligned_cols=94 Identities=15% Similarity=0.187 Sum_probs=53.9
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
||+|.|| |-.|..+++.|++. | .+++.+|+.. ........ ....+.. +..+.. +.++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~---~~~~~~~~-~~~~~~~~Dl~d~~-~~~~~~~- 63 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVEL-----G-------YEVVVVDNLS---SGRREFVN-PSAELHVRDLKDYS-WGAGIKG- 63 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEECCCS---SCCGGGSC-TTSEEECCCTTSTT-TTTTCCC-
T ss_pred EEEEECCCChHHHHHHHHHHhC-----C-------CEEEEEeCCC---CCchhhcC-CCceEEECccccHH-HHhhcCC-
Confidence 7899998 88888888888753 5 3688887642 11111011 1111211 222222 5566654
Q ss_pred CCcEEEEccCCCCC-C---------------CHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGRT-F---------------TKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g~-F---------------t~evv~~Ma~~~erPIIFaLS 446 (521)
|++|=+.+.... . |..+++++.+..-+.|||.=|
T Consensus 64 --d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 113 (312)
T 3ko8_A 64 --DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASS 113 (312)
T ss_dssp --SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred --CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 999987764321 1 235677776666678888654
No 424
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=57.75 E-value=9.3 Score=39.15 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=27.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|..+.+. | .++.++|+..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-----G-------~~V~liE~~~ 38 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-----G-------FNTACVEKRG 38 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEecCC
Confidence 35799999999999999988653 5 3699999854
No 425
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=57.74 E-value=4.9 Score=37.60 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=56.3
Q ss_pred eEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHHhccc
Q 009982 333 RFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDAVKVI 410 (521)
Q Consensus 333 riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~eav~~v 410 (521)
+|+|.|| |-.|..+++.|++. ..| .+++.++++. .+...+......+.. +..+..+|.+++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~---~~g-------~~V~~~~r~~----~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~- 66 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKK---VPA-------SQIIAIVRNV----EKASTLADQGVEVRHGDYNQPESLQKAFAG- 66 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTT---SCG-------GGEEEEESCT----TTTHHHHHTTCEEEECCTTCHHHHHHHTTT-
T ss_pred eEEEEcCCchHHHHHHHHHHHh---CCC-------CeEEEEEcCH----HHHhHHhhcCCeEEEeccCCHHHHHHHHhc-
Confidence 6899998 88888888877542 002 3688888742 111111111111211 21222467788886
Q ss_pred CCcEEEEccCCCC------CCCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 KPTILIGSSGVGR------TFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 kptvLIG~S~~~g------~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+|++|=+++..- .-+..+++++.+..-+.|||.=|
T Consensus 67 -~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 67 -VSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp -CSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred -CCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 899998876421 02356777777665567887543
No 426
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.68 E-value=7.7 Score=40.38 Aligned_cols=33 Identities=24% Similarity=0.427 Sum_probs=27.5
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|||+|||.||+..|..+.+. | .++.++|+.-
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~-----g-------~~V~liE~~~ 35 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARH-----N-------AKVALVEKSR 35 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEeCCC
Confidence 5799999999999999988663 4 4699999863
No 427
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=57.40 E-value=8 Score=39.72 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=27.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+.++||+|||.||+..|..+.+. | .++.++|+.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-----g-------~~V~lie~~ 37 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-----G-------IPTVLVEGQ 37 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-----C-------CEEEEEccC
Confidence 45799999999999999887653 4 379999983
No 428
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=57.17 E-value=8.4 Score=37.37 Aligned_cols=37 Identities=30% Similarity=0.593 Sum_probs=28.3
Q ss_pred cccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+.-|+|+|||+||+..|..|.+. +.|+ ++.++|+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~---r~G~-------~V~viEk~ 99 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKN---RPDL-------KVCIIESS 99 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHH---CTTS-------CEEEECSS
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHh---CCCC-------eEEEEECC
Confidence 3466799999999999999988653 1243 68888875
No 429
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=57.16 E-value=9.7 Score=39.33 Aligned_cols=33 Identities=18% Similarity=0.441 Sum_probs=27.5
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+..|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGAL-----G-------KRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-----c-------CEEEEEeCC
Confidence 46899999999999999888663 5 368999984
No 430
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=57.12 E-value=9 Score=39.02 Aligned_cols=34 Identities=12% Similarity=0.200 Sum_probs=27.5
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+|||+|||.||+..|..+.+.. .| .++.++|+..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~---~g-------~~V~lie~~~ 35 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADH---PD-------ADVTAYEMND 35 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC---TT-------CEEEEEESSS
T ss_pred eEEEECCCHHHHHHHHHHHhhC---cC-------CcEEEEECCC
Confidence 6999999999999999997641 13 4799999875
No 431
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=57.04 E-value=25 Score=34.27 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=32.2
Q ss_pred CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
++...-.++..+.+.+..+ .-.+++++|.|||..|...+.++ .+ .|. +.++.+|+
T Consensus 139 ~aa~l~~~~~~~~~~~~~~-~~~g~~VlV~GaG~vG~~aiq~a-k~----~G~------~~vi~~~~ 193 (346)
T 4a2c_A 139 DGAFIEPITVGLHAFHLAQ-GCENKNVIIIGAGTIGLLAIQCA-VA----LGA------KSVTAIDI 193 (346)
T ss_dssp GGGGHHHHHHHHHHHHHTT-CCTTSEEEEECCSHHHHHHHHHH-HH----TTC------SEEEEEES
T ss_pred HHHhchHHHHHHHHHHHhc-cCCCCEEEEECCCCcchHHHHHH-HH----cCC------cEEEEEec
Confidence 4433333444444444443 34678999999998887655444 32 363 46677765
No 432
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=57.04 E-value=19 Score=34.08 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=49.8
Q ss_pred cceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcc
Q 009982 331 EHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKV 409 (521)
Q Consensus 331 d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~ 409 (521)
+.+|+|.|| |-.|..+++.|++. | .+++.+|+. +.. + . .+.-+..+..++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~------~~~---~-~-~~~~Dl~d~~~~~~~~~~ 58 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN-----N-------WHAVGCGFR------RAR---P-K-FEQVNLLDSNAVHHIIHD 58 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT-----T-------CEEEEEC-----------------------------CHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC-----C-------CeEEEEccC------CCC---C-C-eEEecCCCHHHHHHHHHh
Confidence 358999998 88888888887652 4 367777753 111 0 1 111122233567888887
Q ss_pred cCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 410 IKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 410 vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 59 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS 110 (315)
T 2ydy_A 59 FQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISS 110 (315)
T ss_dssp HCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEE
T ss_pred hCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEch
Confidence 789999988764321 13456677665443 6777544
No 433
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=56.76 E-value=8.7 Score=35.25 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=23.5
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.++++.++||.||.. ||...++..+.+ .| -+++++|++
T Consensus 2 ~~~~~k~vlVtGasg---giG~~~a~~l~~-~G-------~~V~~~~r~ 39 (251)
T 1zk4_A 2 NRLDGKVAIITGGTL---GIGLAIATKFVE-EG-------AKVMITGRH 39 (251)
T ss_dssp CTTTTCEEEETTTTS---HHHHHHHHHHHH-TT-------CEEEEEESC
T ss_pred CCCCCcEEEEeCCCC---hHHHHHHHHHHH-CC-------CEEEEEeCC
Confidence 357788999999743 333444444443 25 358888874
No 434
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=56.67 E-value=16 Score=37.39 Aligned_cols=115 Identities=18% Similarity=0.176 Sum_probs=64.9
Q ss_pred CcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcccc--CCccCCchhchhhccccCCCCCHH
Q 009982 328 TLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVS--SRKDSLQHFKKPWAHEHEPVNNLL 404 (521)
Q Consensus 328 ~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~--~R~~~l~~~k~~fa~~~~~~~~L~ 404 (521)
.++-.||.|+|| |..|-.++-+|.+.- =+..... ..+.|+|...-... +-.-+|.+---+.........+..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~----l~~~~~~-~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~ 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGA----LLGPTTP-VELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPR 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTT----TTCTTCC-EEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhcc----ccCCCCc-cEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChH
Confidence 456679999997 999988888776531 1111111 26889996321110 000012221111111111225688
Q ss_pred HHhcccCCcEEEEccCCC---CC-----------CCHHHHHHHHcCC-CCcEEEEcCCCC
Q 009982 405 DAVKVIKPTILIGSSGVG---RT-----------FTKEVIEAMASFN-EKPLILALSNPT 449 (521)
Q Consensus 405 eav~~vkptvLIG~S~~~---g~-----------Ft~evv~~Ma~~~-erPIIFaLSNPt 449 (521)
+++++ .|+.|=+.+.+ |- +=+++.+.+++++ +.-+|+-.|||.
T Consensus 96 ~a~~~--advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 VAFDG--VAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp HHTTT--CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCC--CCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCc
Confidence 99998 99998665543 31 1235566677765 566888899995
No 435
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=56.62 E-value=9.4 Score=38.84 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=27.8
Q ss_pred eEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 333 RFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+|||+|||.||+..|..+.+.. .| .++.++|+...
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~---~g-------~~V~lie~~~~ 36 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLH---PD-------AEIQWYEKGDF 36 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHC---TT-------SEEEEEESSSS
T ss_pred eEEEECCCHHHHHHHHHHHHhC---cC-------CeEEEEECCCc
Confidence 6999999999999999987641 12 47999998653
No 436
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=56.58 E-value=7 Score=40.75 Aligned_cols=35 Identities=17% Similarity=0.515 Sum_probs=28.0
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|+|+|||.||+..|-.|.+ .|+ ++.++|+.-
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~-----~G~-------~V~liE~~~ 40 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM-----RGH-------RVLLLEREA 40 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-----TTC-------CEEEECSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh-----CCC-------CEEEEccCC
Confidence 34689999999999999988764 354 688888874
No 437
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=56.56 E-value=10 Score=38.82 Aligned_cols=33 Identities=24% Similarity=0.247 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+-.++|+|||.||+..|..+.+. | .++.++|+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-----G-------~~V~liEk~ 35 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-----G-------LKTALIEKY 35 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-----T-------CCEEEEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-----C-------CEEEEEeCC
Confidence 35699999999999999988764 5 468999986
No 438
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=56.37 E-value=17 Score=33.90 Aligned_cols=80 Identities=10% Similarity=0.074 Sum_probs=44.6
Q ss_pred CCcccceEEEeCcch---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchh-------h-cc
Q 009982 327 GTLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKP-------W-AH 395 (521)
Q Consensus 327 ~~L~d~riv~~GAGs---Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~-------f-a~ 395 (521)
.++++.++||.||+. .|.++|+.+++. |. +++++|+..- ..+.+.+.... + .-
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~-----G~-------~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~ 66 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEA-----GA-------RLIFTYAGER----LEKSVHELAGTLDRNDSIILPC 66 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHT-----TC-------EEEEEESSGG----GHHHHHHHHHTSSSCCCEEEEC
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHC-----CC-------EEEEecCchH----HHHHHHHHHHhcCCCCceEEeC
Confidence 357889999999853 566677777652 53 5888887521 00111111111 1 11
Q ss_pred ccCCCCCHHHHhccc-----CCcEEEEccCCC
Q 009982 396 EHEPVNNLLDAVKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 396 ~~~~~~~L~eav~~v-----kptvLIG~S~~~ 422 (521)
|..+..++.++++.+ +.|+||=..+..
T Consensus 67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFA 98 (266)
T ss_dssp CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCeeEEEEccccc
Confidence 222233456666554 789999877653
No 439
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=56.36 E-value=20 Score=34.65 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=59.4
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCch-----hchhhcc-ccCCCC
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQH-----FKKPWAH-EHEPVN 401 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~-----~k~~fa~-~~~~~~ 401 (521)
+++.+|+|.|| |-.|..+++.|++. | .+++.+|+.. .+...+.. .+..+.. +..+..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 70 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTM-----G-------ATVKGYSLTA----PTVPSLFETARVADGMQSEIGDIRDQN 70 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEESSC----SSSSCHHHHTTTTTTSEEEECCTTCHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhC-----C-------CeEEEEeCCC----cccchhhHhhccCCceEEEEccccCHH
Confidence 45678999996 88888888887652 5 3688888742 11111110 0111111 112224
Q ss_pred CHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 009982 402 NLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (521)
Q Consensus 402 ~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (521)
++.++++.+++|++|=+.+.... -|..+++++.+.. -+.|||.=|
T Consensus 71 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 132 (357)
T 1rkx_A 71 KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITS 132 (357)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECC
T ss_pred HHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 57788887789999988875321 0233566665543 467888655
No 440
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=56.19 E-value=9.5 Score=39.57 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=21.4
Q ss_pred cccceEEEeCcchHHHHHHHHHHHH
Q 009982 329 LAEHRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 329 L~d~riv~~GAGsAg~Gia~ll~~~ 353 (521)
....+|+|+|||.||+..|..|.+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~ 30 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQN 30 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhc
Confidence 3457899999999999999998763
No 441
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=56.14 E-value=8.6 Score=40.24 Aligned_cols=39 Identities=31% Similarity=0.397 Sum_probs=29.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHH-------hcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISK-------QTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~-------~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||...|-.|.+.... ..|+ ++.++++.-
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~-------~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL-------NITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC-------EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC-------eEEEEeCCC
Confidence 46899999999999999999875310 0243 688898764
No 442
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=56.06 E-value=12 Score=35.58 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=39.2
Q ss_pred CCCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCH
Q 009982 326 GGTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNL 403 (521)
Q Consensus 326 g~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L 403 (521)
+.++.++++||-||++ .|.++|+.+++ .|. +++++|++- ++.+.+...+..+.. |..+..++
T Consensus 11 ~~~~~~k~vlVTGas~gIG~aia~~l~~-----~G~-------~V~~~~r~~----~~~~~~~~~~~~~~~~Dv~d~~~v 74 (266)
T 3p19_A 11 GRGSMKKLVVITGASSGIGEAIARRFSE-----EGH-------PLLLLARRV----ERLKALNLPNTLCAQVDVTDKYTF 74 (266)
T ss_dssp ----CCCEEEEESTTSHHHHHHHHHHHH-----TTC-------CEEEEESCH----HHHHTTCCTTEEEEECCTTCHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEECCH----HHHHHhhcCCceEEEecCCCHHHH
Confidence 3457788999999753 34445554443 363 688888741 110111111111111 22222345
Q ss_pred HHHhccc-----CCcEEEEccCC
Q 009982 404 LDAVKVI-----KPTILIGSSGV 421 (521)
Q Consensus 404 ~eav~~v-----kptvLIG~S~~ 421 (521)
.++++.+ ++|+||=..+.
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~ 97 (266)
T 3p19_A 75 DTAITRAEKIYGPADAIVNNAGM 97 (266)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCC
T ss_pred HHHHHHHHHHCCCCCEEEECCCc
Confidence 5555544 68999977664
No 443
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=55.99 E-value=11 Score=37.51 Aligned_cols=87 Identities=15% Similarity=0.105 Sum_probs=46.7
Q ss_pred CCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccc--cCCCCCHH
Q 009982 327 GTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHE--HEPVNNLL 404 (521)
Q Consensus 327 ~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~--~~~~~~L~ 404 (521)
.--.+++|+|.|+|..|...+.++.. .|. +++.+|+. ..| +...++.-|.. .....++.
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~-----~Ga-------~Vi~~~~~----~~~---~~~~~~lGa~~vi~~~~~~~~ 246 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKA-----TGA-------EVIVTSSS----REK---LDRAFALGADHGINRLEEDWV 246 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHH-----TTC-------EEEEEESC----HHH---HHHHHHHTCSEEEETTTSCHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-----cCC-------EEEEEecC----chh---HHHHHHcCCCEEEcCCcccHH
Confidence 33457899999999888777655532 362 57777752 111 11111111110 11123455
Q ss_pred HHhc----ccCCcEEEEccCCCCCCCHHHHHHHH
Q 009982 405 DAVK----VIKPTILIGSSGVGRTFTKEVIEAMA 434 (521)
Q Consensus 405 eav~----~vkptvLIG~S~~~g~Ft~evv~~Ma 434 (521)
+.++ +.++|++|=+++ +..-++.++.++
T Consensus 247 ~~v~~~~~g~g~D~vid~~g--~~~~~~~~~~l~ 278 (363)
T 3uog_A 247 ERVYALTGDRGADHILEIAG--GAGLGQSLKAVA 278 (363)
T ss_dssp HHHHHHHTTCCEEEEEEETT--SSCHHHHHHHEE
T ss_pred HHHHHHhCCCCceEEEECCC--hHHHHHHHHHhh
Confidence 5444 336888888776 334455666665
No 444
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=55.95 E-value=23 Score=32.41 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=24.1
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..|+++++||.||+ -.|.++|+.+++ .| -+++++|++
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~-----~G-------~~V~~~~r~ 47 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAA-----HG-------ASVVLLGRT 47 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHH-----TT-------CEEEEEESC
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHH-----CC-------CEEEEEecC
Confidence 35788999999984 334445555543 25 358888875
No 445
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=55.70 E-value=36 Score=31.74 Aligned_cols=76 Identities=13% Similarity=0.151 Sum_probs=42.0
Q ss_pred CCcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHH
Q 009982 327 GTLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLD 405 (521)
Q Consensus 327 ~~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~e 405 (521)
..+++.++||.||+ -.|..+|+.+++ .|. +++++|++- ...+.+. +..+.-|. ..++.+
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~-----~G~-------~V~~~~r~~----~~~~~~~--~~~~~~D~--~~~~~~ 74 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQ-----EGA-------EVTICARNE----ELLKRSG--HRYVVCDL--RKDLDL 74 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHH-----TTC-------EEEEEESCH----HHHHHTC--SEEEECCT--TTCHHH
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEcCCH----HHHHhhC--CeEEEeeH--HHHHHH
Confidence 45788999999984 345555555543 352 588888753 0000111 11111111 235666
Q ss_pred Hhccc-CCcEEEEccCCC
Q 009982 406 AVKVI-KPTILIGSSGVG 422 (521)
Q Consensus 406 av~~v-kptvLIG~S~~~ 422 (521)
+++.+ ++|+||=..+..
T Consensus 75 ~~~~~~~iD~lv~~Ag~~ 92 (249)
T 1o5i_A 75 LFEKVKEVDILVLNAGGP 92 (249)
T ss_dssp HHHHSCCCSEEEECCCCC
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 66655 799999877643
No 446
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=55.60 E-value=25 Score=34.41 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=50.7
Q ss_pred eEEEeC-cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 333 RFLFLG-AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 333 riv~~G-AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
||+|.| +|-.|..+++.|++. |. -+++.+|+. .+..+|.+++++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~-----g~------~~v~~~d~~----------------------~d~~~l~~~~~~-- 46 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTST-----TD------HHIFEVHRQ----------------------TKEEELESALLK-- 46 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHH-----CC------CEEEECCTT----------------------CCHHHHHHHHHH--
T ss_pred EEEEECCCCHHHHHHHHHHHhC-----CC------CEEEEECCC----------------------CCHHHHHHHhcc--
Confidence 789999 588898898888764 42 257766664 111346677765
Q ss_pred CcEEEEccCCCC------------CCCHHHHHHHHcCCCC-cEEEEcC
Q 009982 412 PTILIGSSGVGR------------TFTKEVIEAMASFNEK-PLILALS 446 (521)
Q Consensus 412 ptvLIG~S~~~g------------~Ft~evv~~Ma~~~er-PIIFaLS 446 (521)
+|++|=+.+... ..+..+++++.+..-+ .+||.=|
T Consensus 47 ~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss 94 (369)
T 3st7_A 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS 94 (369)
T ss_dssp CSEEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEE
T ss_pred CCEEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCc
Confidence 888886654321 1245688887765544 6777543
No 447
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=55.48 E-value=6 Score=38.22 Aligned_cols=33 Identities=21% Similarity=0.515 Sum_probs=27.2
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
...|+|+|||.+|+.+|-.|. . | .++.++|+..
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~-----G-------~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-A-----H-------GRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-T-----T-------SCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-C-----C-------CCEEEEECCC
Confidence 568999999999999998886 2 5 3688999874
No 448
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=55.37 E-value=8.8 Score=39.80 Aligned_cols=36 Identities=28% Similarity=0.477 Sum_probs=27.9
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+|||+|||.||+..|..+.+.- ..| .++.++|+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~--~~G-------~~V~liE~~~ 38 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSH--PET-------TQVTVIDCDG 38 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC--TTT-------EEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCc-------CEEEEEeCCC
Confidence 57999999999999999887630 003 3799999874
No 449
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=55.29 E-value=7.8 Score=39.21 Aligned_cols=104 Identities=10% Similarity=0.072 Sum_probs=48.2
Q ss_pred HHHHHHhCCCccc-ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc
Q 009982 319 VAALKLIGGTLAE-HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH 397 (521)
Q Consensus 319 l~Alk~~g~~L~d-~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~ 397 (521)
|+.-.+...++++ .||-|+|+|..|-.-++.+.........+ .+-.+=+-+||++ .+ ......+.|-- .
T Consensus 13 ~~~~~~~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~--~~~~elvav~d~~----~~---~a~~~a~~~~~-~ 82 (412)
T 4gqa_A 13 LGTENLYFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDL--PKRPHLYALADQD----QA---MAERHAAKLGA-E 82 (412)
T ss_dssp ------------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTS--SSEEEEEEEECSS----HH---HHHHHHHHHTC-S
T ss_pred cccccCccccccccceEEEEcCcHHHHHHHHHHHhcccccccc--CCCeEEEEEEcCC----HH---HHHHHHHHcCC-C
Confidence 3334444455665 69999999988876665554432110001 0011223456652 11 12222222211 1
Q ss_pred CCCCCHHHHhcccCCcEEEEccCCCCCCCHHHHHH-HH
Q 009982 398 EPVNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEA-MA 434 (521)
Q Consensus 398 ~~~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~-Ma 434 (521)
.-..++.|.++.-++|+++ ++++. .+..+++.+ |.
T Consensus 83 ~~y~d~~~ll~~~~vD~V~-I~tp~-~~H~~~~~~al~ 118 (412)
T 4gqa_A 83 KAYGDWRELVNDPQVDVVD-ITSPN-HLHYTMAMAAIA 118 (412)
T ss_dssp EEESSHHHHHHCTTCCEEE-ECSCG-GGHHHHHHHHHH
T ss_pred eEECCHHHHhcCCCCCEEE-ECCCc-HHHHHHHHHHHH
Confidence 1236899999988889877 56644 455555544 44
No 450
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=55.15 E-value=6.8 Score=41.11 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.0
Q ss_pred eEEEeCcchHHHHHHHHHHHHH
Q 009982 333 RFLFLGAGEAGTGIAELIALEI 354 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~~ 354 (521)
-||++|||.+|+++|-.|.+..
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~ 62 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDAL 62 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHH
T ss_pred cEEEEcccHHHHHHHHHHHhcC
Confidence 4899999999999998887653
No 451
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=55.08 E-value=13 Score=36.84 Aligned_cols=55 Identities=22% Similarity=0.184 Sum_probs=34.4
Q ss_pred CchHHHHHHHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 308 QGTASVVLAGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 308 QGTaaV~LAgll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
++.....++.-+.|++..+.+ .+++|+|+|||..|...+.+.. . .|. ++++.+|+
T Consensus 158 ~aa~~~~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~aiqlak-~----~Ga------~~Vi~~~~ 212 (363)
T 3m6i_A 158 NGAMLEPLSVALAGLQRAGVR-LGDPVLICGAGPIGLITMLCAK-A----AGA------CPLVITDI 212 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCC-TTCCEEEECCSHHHHHHHHHHH-H----TTC------CSEEEEES
T ss_pred HHHhhhHHHHHHHHHHHcCCC-CCCEEEEECCCHHHHHHHHHHH-H----cCC------CEEEEECC
Confidence 343333444555666555433 4679999999988877665443 2 364 56888876
No 452
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=55.03 E-value=9.6 Score=35.63 Aligned_cols=37 Identities=30% Similarity=0.355 Sum_probs=24.4
Q ss_pred CCcccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 327 GTLAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 327 ~~L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+++++||-||+. .|.++|+.+++ .|. +++++|++
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~-----~G~-------~V~~~~r~ 39 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAA-----DGA-------TVIVSDIN 39 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEECSC
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHH-----CCC-------EEEEEeCC
Confidence 357889999999743 45555555544 353 58888764
No 453
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=55.02 E-value=10 Score=39.25 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..+|+|+|||.||+..|..|.+. | .++.++++..-
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-----G-------~~V~vlE~~~~ 38 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-----G-------LNVVVLEARDR 38 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CCEEEEeCCCC
Confidence 35799999999999999998763 5 35777777543
No 454
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=54.90 E-value=11 Score=39.03 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|||+|||.||+..|..+.+. |. ++.++|+..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-----G~-------~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-----GL-------KVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-----CC-------eEEEEeCCC
Confidence 45899999999999999877652 53 599999853
No 455
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=54.89 E-value=26 Score=34.24 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=57.1
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchh----------chhhcc-ccCC
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHF----------KKPWAH-EHEP 399 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~----------k~~fa~-~~~~ 399 (521)
.+|+|.|| |-.|..+++.|++. | .+++++|+..--.. .+.+... +..+.. +..+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK-----G-------YEVHGIVRRSSSFN--TGRIEHLYKNPQAHIEGNMKLHYGDLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCCSSCC--CTTTGGGC---------CEEEEECCTTC
T ss_pred cEEEEECCCchHHHHHHHHHHHC-----C-------CEEEEEECCccccc--hhhHHHHhhhhccccCCCceEEEccCCC
Confidence 47999996 88888888887652 4 36888887521000 0111111 111111 1122
Q ss_pred CCCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCC---CcEEEEcC
Q 009982 400 VNNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNE---KPLILALS 446 (521)
Q Consensus 400 ~~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~e---rPIIFaLS 446 (521)
..++.++++.+++|++|=+.+.... -|..+++++.+..- +.|||.=|
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS 156 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQAST 156 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEE
T ss_pred HHHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecc
Confidence 2357788888889999988775421 12345666655443 57887544
No 456
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=54.80 E-value=8.2 Score=39.30 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
+.+|+|+|||.||+..|..+.+. |. ++.++|+..-
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-----G~-------~V~vlEk~~~ 38 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-----GK-------SVTVFDNGKK 38 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-----CC-------CEEEEeCCCC
Confidence 45799999999999999888653 53 6889998653
No 457
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=54.65 E-value=14 Score=37.31 Aligned_cols=36 Identities=19% Similarity=0.298 Sum_probs=28.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|+|+|||.+|+..|..|.+. |- ..++.++++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-----g~-----~~~v~v~E~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-----FP-----DLNITLLEAGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-----CT-----TSEEEEECSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHh-----CC-----CCCEEEEECCC
Confidence 46899999999999999998774 41 14688888753
No 458
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=54.63 E-value=8.7 Score=39.13 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=19.2
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~ 353 (521)
.+|||+|||-+|+..|-.|.++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~ 23 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA 23 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 4799999999999999888764
No 459
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=54.60 E-value=9.3 Score=36.74 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=57.7
Q ss_pred ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccC---CccCCchhc------hhhcc-ccCCC
Q 009982 332 HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSS---RKDSLQHFK------KPWAH-EHEPV 400 (521)
Q Consensus 332 ~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~---R~~~l~~~k------~~fa~-~~~~~ 400 (521)
.+|+|.|| |-.|..+++.|++. | .+++++|+.---..+ ..+.+...+ ..+.. +..+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 70 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEA-----G-------YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQ 70 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-----T-------CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC-----C-------CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCH
Confidence 57999986 88888888887652 5 358888864210000 000011000 01111 11122
Q ss_pred CCHHHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 401 NNLLDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 401 ~~L~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.++.++++..++|++|=+.+.... -|..++++|.+..-+.|||.=|
T Consensus 71 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 357777876679999988775421 1345677777665567888543
No 460
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=54.59 E-value=11 Score=38.70 Aligned_cols=34 Identities=24% Similarity=0.487 Sum_probs=28.2
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
...+|+|+|||.||+..|..|.+. | .++.++++.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-----G-------~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-----G-------HDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-----S-------CEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-----C-------CcEEEEecc
Confidence 467999999999999999988763 5 368888876
No 461
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=54.52 E-value=9.9 Score=37.93 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=20.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~ 353 (521)
.+|+|+|||.+|+..|..|.+.
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~ 27 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKE 27 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHh
Confidence 5899999999999999999876
No 462
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=54.50 E-value=39 Score=31.36 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=40.2
Q ss_pred CcccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHH
Q 009982 328 TLAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDA 406 (521)
Q Consensus 328 ~L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~ea 406 (521)
+|++.++||.||+ -.|..+|+.+++ .| -+++++|++--+ .... -..+.-|..+..++.++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~-----~G-------~~V~~~~r~~~~-----~~~~--~~~~~~D~~d~~~~~~~ 64 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVE-----AG-------AKVTGFDQAFTQ-----EQYP--FATEVMDVADAAQVAQV 64 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHH-----TT-------CEEEEEESCCCS-----SCCS--SEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHH-----CC-------CEEEEEeCchhh-----hcCC--ceEEEcCCCCHHHHHHH
Confidence 4778899999974 334445555543 25 368888875211 0010 01111122222345555
Q ss_pred hccc-----CCcEEEEccCC
Q 009982 407 VKVI-----KPTILIGSSGV 421 (521)
Q Consensus 407 v~~v-----kptvLIG~S~~ 421 (521)
++.+ ++|+||=..+.
T Consensus 65 ~~~~~~~~g~id~lv~~Ag~ 84 (250)
T 2fwm_X 65 CQRLLAETERLDALVNAAGI 84 (250)
T ss_dssp HHHHHHHCSCCCEEEECCCC
T ss_pred HHHHHHHcCCCCEEEECCCc
Confidence 5544 79999977664
No 463
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=54.38 E-value=33 Score=34.00 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=25.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+++|+|.|||..|..++.++... | | +++.+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-----G-----a--~Vi~~~~~ 213 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-----G-----L--EVWMANRR 213 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-----T-----C--EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-----C-----C--EEEEEeCC
Confidence 89999999988888777766432 5 2 68888864
No 464
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=54.35 E-value=13 Score=37.81 Aligned_cols=91 Identities=8% Similarity=0.087 Sum_probs=52.1
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhccc-
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVI- 410 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~v- 410 (521)
.||.|+|+|..|..+|..|... | .+++++|++- +.+...++. ......++.++++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-----G-------~~V~~~dr~~-------~~~~~a~~~---G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-----N-------HSVFGYNRSR-------SGAKSAVDE---GFDVSADLEATLQRAA 66 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSCH-------HHHHHHHHT---TCCEESCHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-----C-------CEEEEEeCCH-------HHHHHHHHc---CCeeeCCHHHHHHhcc
Confidence 5899999999999999988753 5 3688888641 111111100 001124666666542
Q ss_pred -CCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEEEcC
Q 009982 411 -KPTILIGSSGVGRTFTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 411 -kptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIFaLS 446 (521)
.+|++| ++.+. .-++++++.++.+.+.-||.=++
T Consensus 67 ~~aDlVi-lavP~-~~~~~vl~~l~~~~~~~iv~Dv~ 101 (341)
T 3ktd_A 67 AEDALIV-LAVPM-TAIDSLLDAVHTHAPNNGFTDVV 101 (341)
T ss_dssp HTTCEEE-ECSCH-HHHHHHHHHHHHHCTTCCEEECC
T ss_pred cCCCEEE-EeCCH-HHHHHHHHHHHccCCCCEEEEcC
Confidence 367766 44433 24567777666554444554443
No 465
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=54.11 E-value=9.7 Score=38.94 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=27.4
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
..|+|+|||.||+..|-.+.+. | .++.++|+...
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE-----G-------ANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHC-----C-------CCEEEEECCCC
Confidence 5799999999999999887652 5 36899998653
No 466
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=53.94 E-value=11 Score=37.92 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=27.4
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
.+.+|+|+|||.||+..|..|.+. |. ++.++++..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~-----g~-------~v~v~E~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKA-----GL-------SVAVIEARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-----CC-------cEEEEECCC
Confidence 356899999999999999988763 53 577777753
No 467
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=53.93 E-value=10 Score=40.10 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=27.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..|||+|||.||+..|-.|.+. |+ ++.++|+.-
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~-----G~-------~V~vlEr~~ 59 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHR-----QV-------GHLVVEQTD 59 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------CEEEEeCCC
Confidence 46899999999999999888663 64 478888753
No 468
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=53.86 E-value=5.7 Score=40.52 Aligned_cols=34 Identities=38% Similarity=0.446 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.||+..|..|.+ .|+ ++.++|++-
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-----~G~-------~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-----RGL-------KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-----SSC-------CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHH-----CCC-------CEEEEECCC
Confidence 3579999999999999988864 354 577777754
No 469
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=53.75 E-value=71 Score=32.18 Aligned_cols=135 Identities=13% Similarity=0.155 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCcc-cceEEEeC
Q 009982 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLA-EHRFLFLG 338 (521)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~L~-d~riv~~G 338 (521)
+.+.+..+ .+| .++ |-+-.++ +.+.+.|.+|- ++||.| || +-=-+=+||=++.-.+.. ++|+ +.||+++|
T Consensus 81 l~DTarvl-s~~-~D~-iviR~~~-~~~~~~lA~~~-~vPVINag~~-~~HPtQaLaDl~Ti~e~~-g~l~~gl~va~vG 153 (307)
T 3tpf_A 81 VKDTARVI-GAM-VDF-VMMRVNK-HETLLEFARYS-KAPVINALSE-LYHPTQVLGDLFTIKEWN-KMQNGIAKVAFIG 153 (307)
T ss_dssp HHHHHHHH-HHH-SSE-EEEECSC-HHHHHHHHHHC-SSCEEEEECS-SCCHHHHHHHHHHHHHTT-CCGGGCCEEEEES
T ss_pred HHHHHHHH-HHh-CCE-EEEecCC-hHHHHHHHHhC-CCCEEeCCCC-CcCcHHHHHHHHHHHHHh-CCCCCCCEEEEEc
Confidence 34445444 446 554 3355554 45566667765 689998 54 333455677766655544 4799 99999999
Q ss_pred cchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHHHHhcccCCcE
Q 009982 339 AGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPTI 414 (521)
Q Consensus 339 AGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~eav~~vkptv 414 (521)
-+. -+|+-++.++.+ .|+ +|.++-.+|+.-.. + +-...+.+|+.. ....++.|||++ +||
T Consensus 154 D~~---~va~Sl~~~~~~-~G~-------~v~~~~P~~~~~~~--~-~~~~~~~~a~~~g~~~~~~~d~~eav~~--aDv 217 (307)
T 3tpf_A 154 DSN---NMCNSWLITAAI-LGF-------EISIAMPKNYKISP--E-IWEFAMKQALISGAKISLGYDKFEALKD--KDV 217 (307)
T ss_dssp CSS---HHHHHHHHHHHH-HTC-------EEEEECCTTCCCCH--H-HHHHHHHHHHHHTCEEEEESCHHHHHTT--CSE
T ss_pred CCC---ccHHHHHHHHHH-cCC-------EEEEECCCccCCCH--H-HHHHHHHHHHHcCCeEEEEcCHHHHhcC--CCE
Confidence 974 488888877766 364 68888887774321 1 111112233221 123689999998 999
Q ss_pred EEEcc
Q 009982 415 LIGSS 419 (521)
Q Consensus 415 LIG~S 419 (521)
+.-..
T Consensus 218 vyt~~ 222 (307)
T 3tpf_A 218 VITDT 222 (307)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 97655
No 470
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=53.58 E-value=11 Score=35.98 Aligned_cols=37 Identities=24% Similarity=0.370 Sum_probs=28.3
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCc
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGL 377 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GL 377 (521)
.+..|||+|||.||+..|..+.+. .| .++.++|+..-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~----~G-------~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKN----PN-------VQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTS----TT-------SCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHc----CC-------CeEEEEECCCC
Confidence 346899999999999999887641 14 36889998643
No 471
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=53.47 E-value=10 Score=39.01 Aligned_cols=34 Identities=26% Similarity=0.381 Sum_probs=27.8
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+.+|+|+|||.||+..|..+.+. | .++.++|+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-----G-------~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-----G-------ARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEecC
Confidence 356899999999999999888663 5 368899965
No 472
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=53.34 E-value=22 Score=34.95 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhCCCccc--ceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 312 SVVLAGVVAALKLIGGTLAE--HRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 312 aV~LAgll~Alk~~g~~L~d--~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+.++.-+.|+...++--.+ ++++|.|| |..|..+++++.. .|. ++++.+|+.
T Consensus 140 ~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~-----~Ga------~~Vi~~~~~ 195 (357)
T 2zb4_A 140 GMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHF-----LGC------SRVVGICGT 195 (357)
T ss_dssp SHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHH-----TTC------SEEEEEESC
T ss_pred ccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHH-----CCC------CeEEEEeCC
Confidence 34445555566333333356 89999998 9888888776654 353 478888873
No 473
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=53.28 E-value=11 Score=38.34 Aligned_cols=22 Identities=14% Similarity=0.332 Sum_probs=19.6
Q ss_pred ceEEEeCcchHHHHHHHHHHHH
Q 009982 332 HRFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~ 353 (521)
.+|+|+|||.||+..|..|.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~ 61 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVA 61 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT
T ss_pred CCEEEECCcHHHHHHHHHHHHC
Confidence 5899999999999999988763
No 474
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=53.27 E-value=7.6 Score=38.79 Aligned_cols=35 Identities=14% Similarity=0.383 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
..++||+|+|.||+..|..+.+. | ++.++|+.-..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-----g--------~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-----Y--------EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-----S--------EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-----C--------CEEEEECCCCC
Confidence 45899999999999999888431 2 78999986543
No 475
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=53.16 E-value=21 Score=34.64 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=54.4
Q ss_pred cccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHh
Q 009982 329 LAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAV 407 (521)
Q Consensus 329 L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav 407 (521)
++..+|+|.|| |-.|..+++.|++. |. .+++++|+..--. ....+... .+.-+..+...+.+++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~-----g~------~~V~~~~r~~~~~--~~~~~~~~--~~~~d~~~~~~~~~~~ 108 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDK-----GI------TDILVVDNLKDGT--KFVNLVDL--NIADYMDKEDFLIQIM 108 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHT-----TC------CCEEEEECCSSGG--GGGGTTTS--CCSEEEEHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-----CC------cEEEEEecCCCcc--hhhcccCc--eEeeecCcHHHHHHHH
Confidence 45678999998 88888888887652 41 4678887642100 00011110 0111111112455566
Q ss_pred ccc---CCcEEEEccCCCCC--------------CCHHHHHHHHcCCCCcEEEEcC
Q 009982 408 KVI---KPTILIGSSGVGRT--------------FTKEVIEAMASFNEKPLILALS 446 (521)
Q Consensus 408 ~~v---kptvLIG~S~~~g~--------------Ft~evv~~Ma~~~erPIIFaLS 446 (521)
+.. ++|++|=+.+.... -|..+++++.+..- .|||.=|
T Consensus 109 ~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS 163 (357)
T 2x6t_A 109 AGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASS 163 (357)
T ss_dssp TTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcc
Confidence 532 59999988775432 13456777765444 7887543
No 476
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=52.98 E-value=12 Score=37.85 Aligned_cols=34 Identities=24% Similarity=0.504 Sum_probs=26.9
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+.+|+|+|||.+|+..|..|.+. | .++.++|+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-----g-------~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-----G-------HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-----T-------CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CcEEEEEecC
Confidence 46899999999999999988652 4 4677887753
No 477
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=52.95 E-value=32 Score=33.49 Aligned_cols=47 Identities=21% Similarity=0.176 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 316 AGVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 316 Agll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
...+.+++..+. -..++++|+|||+.|...+.++..+ .| .+++.+|+
T Consensus 150 ~ta~~~l~~~~~-~~g~~VlV~GaG~~g~~a~~~a~~~----~g-------~~Vi~~~~ 196 (348)
T 4eez_A 150 VTTYKAIKVSGV-KPGDWQVIFGAGGLGNLAIQYAKNV----FG-------AKVIAVDI 196 (348)
T ss_dssp HHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHT----SC-------CEEEEEES
T ss_pred eeEEeeecccCC-CCCCEEEEEcCCCccHHHHHHHHHh----CC-------CEEEEEEC
Confidence 344566776654 3568999999999887666555432 23 46888876
No 478
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=52.63 E-value=37 Score=31.97 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=41.4
Q ss_pred cccceEEEeCcch-HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-ccCCCCCHHHH
Q 009982 329 LAEHRFLFLGAGE-AGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH-EHEPVNNLLDA 406 (521)
Q Consensus 329 L~d~riv~~GAGs-Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~-~~~~~~~L~ea 406 (521)
++++++||-||+. .|.++|+.+++ .| -+++++|++- .. ....+..+.. |..+..++.++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~-----~G-------~~V~~~~r~~----~~---~~~~~~~~~~~Dv~d~~~v~~~ 86 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRD-----RN-------YRVVATSRSI----KP---SADPDIHTVAGDISKPETADRI 86 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHH-----TT-------CEEEEEESSC----CC---CSSTTEEEEESCTTSHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHH-----CC-------CEEEEEeCCh----hh---cccCceEEEEccCCCHHHHHHH
Confidence 5678899999753 44455555544 35 3688888752 11 1111111211 22222345555
Q ss_pred hccc-----CCcEEEEccCCC
Q 009982 407 VKVI-----KPTILIGSSGVG 422 (521)
Q Consensus 407 v~~v-----kptvLIG~S~~~ 422 (521)
++.+ ++|+||=..+..
T Consensus 87 ~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 87 VREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp HHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHCCCCCEEEECCCCC
Confidence 6544 799999877643
No 479
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=52.46 E-value=26 Score=33.36 Aligned_cols=103 Identities=16% Similarity=0.169 Sum_probs=57.7
Q ss_pred ccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCc----hhchhhcc-ccCCCCCH
Q 009982 330 AEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQ----HFKKPWAH-EHEPVNNL 403 (521)
Q Consensus 330 ~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~----~~k~~fa~-~~~~~~~L 403 (521)
...||+|.|| |-.|..+++.|++. | .+++.+|+..- ......+. .....+.. +..+..++
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~-----g-------~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 78 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK-----G-------YRVHGLVARRS--SDTRWRLRELGIEGDIQYEDGDMADACSV 78 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT-----T-------CEEEEEECCCS--SCCCHHHHHTTCGGGEEEEECCTTCHHHH
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC-----C-------CeEEEEeCCCc--cccccchhhccccCceEEEECCCCCHHHH
Confidence 4578999987 77888888877652 4 36888887421 00000010 00111111 11222467
Q ss_pred HHHhcccCCcEEEEccCCCCC----------------CCHHHHHHHHcCC-CCcEEEEcC
Q 009982 404 LDAVKVIKPTILIGSSGVGRT----------------FTKEVIEAMASFN-EKPLILALS 446 (521)
Q Consensus 404 ~eav~~vkptvLIG~S~~~g~----------------Ft~evv~~Ma~~~-erPIIFaLS 446 (521)
.++++.+++|++|=+.+.... -|..+++++.+.. .+.+||.=|
T Consensus 79 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS 138 (335)
T 1rpn_A 79 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 138 (335)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 888888889999988775421 1234667776654 367887544
No 480
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=52.38 E-value=9.7 Score=40.62 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=27.3
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+--|||+|||.+|+++|..++.. |+ ++.++++.
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~-----G~-------~V~LlEk~ 50 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVR-----GI-------QTGLVEMN 50 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-----TC-------CEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----CC-------cEEEEECC
Confidence 45799999999999999888653 64 58889886
No 481
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=52.33 E-value=2.1 Score=41.18 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=17.0
Q ss_pred eEEEeCcchHHHHHHHHHHHH
Q 009982 333 RFLFLGAGEAGTGIAELIALE 353 (521)
Q Consensus 333 riv~~GAGsAg~Gia~ll~~~ 353 (521)
||.|+|+|..|.++|+.+...
T Consensus 4 ~I~iIG~G~mG~~la~~l~~~ 24 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLKDR 24 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC--
T ss_pred eEEEEeCCHHHHHHHHHHHHc
Confidence 799999999999998877543
No 482
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=52.25 E-value=15 Score=38.12 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=26.4
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEe
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVD 373 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvD 373 (521)
+.+++|+|||.||+..|..+.+. .| .++.++|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~----~G-------~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASL----HK-------KRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHH----HC-------CCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHH----cC-------CEEEEEe
Confidence 45799999999999999998761 15 3699999
No 483
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=52.12 E-value=14 Score=34.61 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=26.1
Q ss_pred cccceEEEeCcc---hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 329 LAEHRFLFLGAG---EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 329 L~d~riv~~GAG---sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
|+++++||-||+ -.|.++|+.+++ .|. +++++|++.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~-----~G~-------~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHR-----EGA-------ELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH-----TTC-------EEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHH-----CCC-------EEEEEcCcH
Confidence 677899999984 566677777765 253 588888763
No 484
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=52.10 E-value=8.7 Score=38.11 Aligned_cols=36 Identities=28% Similarity=0.415 Sum_probs=30.1
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.+|||+|+|..|..-+++|+.+ | .++.++|.+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~-----G-------a~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPT-----G-------CKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGG-----T-------CEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhC-----C-------CEEEEEcCC
Confidence 57889999999999999999999764 4 358888864
No 485
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=52.07 E-value=11 Score=40.24 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=27.8
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
...|||+|+|.+|+++|..+++. |+ ++.++|+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~r-----G~-------~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAAS-----GI-------KTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-----TC-------CEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-----CC-------cEEEEeCCC
Confidence 45799999999999999988753 64 588999764
No 486
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=52.03 E-value=23 Score=34.78 Aligned_cols=44 Identities=25% Similarity=0.262 Sum_probs=29.6
Q ss_pred HHHHHHHhCCCcccceEEEeCc-chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEec
Q 009982 318 VVAALKLIGGTLAEHRFLFLGA-GEAGTGIAELIALEISKQTKAPVEETRKKICLVDS 374 (521)
Q Consensus 318 ll~Alk~~g~~L~d~riv~~GA-GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs 374 (521)
.+.|++..+ --.+++++|.|| |..|..+++++.. .|. +++.+|+
T Consensus 158 a~~~l~~~~-~~~g~~vlV~Ga~ggiG~~~~~~a~~-----~Ga-------~V~~~~~ 202 (347)
T 2hcy_A 158 VYKALKSAN-LMAGHWVAISGAAGGLGSLAVQYAKA-----MGY-------RVLGIDG 202 (347)
T ss_dssp HHHHHHTTT-CCTTCEEEEETTTSHHHHHHHHHHHH-----TTC-------EEEEEEC
T ss_pred HHHHHHhcC-CCCCCEEEEECCCchHHHHHHHHHHH-----CCC-------cEEEEcC
Confidence 345555442 235689999999 8888888776643 252 6888875
No 487
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=51.92 E-value=1.6e+02 Score=29.37 Aligned_cols=132 Identities=14% Similarity=0.131 Sum_probs=85.0
Q ss_pred HHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceec--cCCCchHHHHHHHHHHHHHHhCCCcccceEEEeCc-
Q 009982 263 DEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--DDIQGTASVVLAGVVAALKLIGGTLAEHRFLFLGA- 339 (521)
Q Consensus 263 defv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--DDiQGTaaV~LAgll~Alk~~g~~L~d~riv~~GA- 339 (521)
...+. +-.+||.++++ +-.++...+..++.+|- ++||.| |-.+-=-+=+||=++.-.+..| +|++.||.++|-
T Consensus 80 ~DTar-vls~~~~D~iv-iR~~~~~~~~~~la~~~-~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g-~l~gl~va~vGDl 155 (291)
T 3d6n_B 80 FDTLK-TFEGLGFDYVV-FRVPFVFFPYKEIVKSL-NLRLVNAGDGTHQHPSQGLIDFFTIKEHFG-EVKDLRVLYVGDI 155 (291)
T ss_dssp HHHHH-HHHHTTCSEEE-EEESSCCCSCHHHHHTC-SSEEEEEEETTTBCHHHHHHHHHHHHHHHS-CCTTCEEEEESCC
T ss_pred HHHHH-HHHHhcCCEEE-EEcCChHHHHHHHHHhC-CCCEEeCccCCCcCcHHHHHHHHHHHHHhC-CcCCcEEEEECCC
Confidence 33444 44568655543 56666555544377774 699999 3333334456777776655554 799999999998
Q ss_pred -chHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccCCcEEEEc
Q 009982 340 -GEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIKPTILIGS 418 (521)
Q Consensus 340 -GsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vkptvLIG~ 418 (521)
|+ -+|+-++.++.+ .|+ +|.++-.+|+.-.. +.. + ...-..++.||+++ +||+.-+
T Consensus 156 ~~~---rva~Sl~~~~~~-~g~-------~v~~~~P~~~~p~~----~~~----~--g~~~~~d~~eav~~--aDvvy~~ 212 (291)
T 3d6n_B 156 KHS---RVFRSGAPLLNM-FGA-------KIGVCGPKTLIPRD----VEV----F--KVDVFDDVDKGIDW--ADVVIWL 212 (291)
T ss_dssp TTC---HHHHHHHHHHHH-TTC-------EEEEESCGGGSCTT----GGG----G--CEEEESSHHHHHHH--CSEEEEC
T ss_pred CCC---chHHHHHHHHHH-CCC-------EEEEECCchhCCch----HHH----C--CCEEEcCHHHHhCC--CCEEEEe
Confidence 63 377777777766 364 68899888884322 211 1 01113689999998 9999985
Q ss_pred cCC
Q 009982 419 SGV 421 (521)
Q Consensus 419 S~~ 421 (521)
-.+
T Consensus 213 ~~q 215 (291)
T 3d6n_B 213 RLQ 215 (291)
T ss_dssp CCC
T ss_pred Ccc
Confidence 543
No 488
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=51.90 E-value=11 Score=38.10 Aligned_cols=34 Identities=26% Similarity=0.465 Sum_probs=26.3
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
.+|+|+|||.||+..|-.|.+. |.+ .++.++++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-----G~~-----~~V~vlEa~ 36 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-----PCP-----PKVVLVESS 36 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-----SSC-----CEEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCC-----CcEEEEeCC
Confidence 5799999999999999998753 531 167778764
No 489
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=51.87 E-value=12 Score=41.33 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
..+|||+|||.||+..|..+.+. | .++.++|+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~-----G-------~~Vtlie~~~ 422 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMES-----G-------YTVHLTDTAE 422 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----T-------CEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHC-----C-------CeEEEEeCCC
Confidence 46899999999999999988753 5 3589999864
No 490
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=51.82 E-value=14 Score=34.95 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=27.1
Q ss_pred CcccceEEEeCcch---HHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGE---AGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGs---Ag~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|+++++||-||++ .|.+||+.+++ +|. +++++|++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~-----~Ga-------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQ-----LGA-------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHH-----TTC-------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHH-----CCC-------EEEEEECC
Confidence 68999999999853 56667777765 363 68999875
No 491
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=51.77 E-value=1.2e+02 Score=30.55 Aligned_cols=136 Identities=15% Similarity=0.175 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhcCCCeeeeeecCCCccHHHHHHHHcCCCceec--c--CCCchHHHHHHHHHHHHHHhCCCcccceEEEe
Q 009982 262 LDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFN--D--DIQGTASVVLAGVVAALKLIGGTLAEHRFLFL 337 (521)
Q Consensus 262 idefv~av~~~fGp~~lIq~EDf~~~~af~iL~ryr~~~~~Fn--D--DiQGTaaV~LAgll~Alk~~g~~L~d~riv~~ 337 (521)
+...+. +-.+| .++ |-+-.++ +.+.+.+.+|-.++||.| | ..|=| =+||=++.-.+..| +|++.||.++
T Consensus 88 l~DTar-vls~~-~D~-iviR~~~-~~~~~~la~~~~~vPVINag~G~~~HPt--QaLaDl~Ti~e~~g-~l~gl~va~v 160 (310)
T 3csu_A 88 LADTIS-VISTY-VDA-IVMRHPQ-EGAARLATEFSGNVPVLNAGDGSNQHPT--QTLLDLFTIQETQG-RLDNLHVAMV 160 (310)
T ss_dssp HHHHHH-HHTTT-CSE-EEEEESS-TTHHHHHHHHCTTCCEEEEEETTSCCHH--HHHHHHHHHHHHHS-CSSSCEEEEE
T ss_pred HHHHHH-HHHHh-CCE-EEEECCC-hhHHHHHHHhcCCCCEEcCccCCCCCch--HHHHHHHHHHHHhC-CcCCcEEEEE
Confidence 333444 34557 444 4466665 456667778865799999 4 34544 45677666555554 7999999999
Q ss_pred CcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcccc----CCCCCHHHHhcccCCc
Q 009982 338 GAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEH----EPVNNLLDAVKVIKPT 413 (521)
Q Consensus 338 GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~----~~~~~L~eav~~vkpt 413 (521)
|-|.= --+|+-++.++.+-.|+ +|.++-.+|+--. +.-..+++.. ....++.||+++ +|
T Consensus 161 GD~~~-~rva~Sl~~~~~~~~g~-------~v~~~~P~~~~~~-------~~~~~~~~~~g~~~~~~~d~~eav~~--aD 223 (310)
T 3csu_A 161 GDLKY-GRTVHSLTQALAKFDGN-------RFYFIAPDALAMP-------QYILDMLDEKGIAWSLHSSIEEVMAE--VD 223 (310)
T ss_dssp SCTTT-CHHHHHHHHHHHTSSSC-------EEEEECCGGGCCC-------HHHHHHHHHTTCCEEECSCGGGTTTT--CS
T ss_pred CCCCC-CchHHHHHHHHHhCCCC-------EEEEECCcccccC-------HHHHHHHHHcCCeEEEEcCHHHHhcC--CC
Confidence 98631 12567777766552264 6888888876332 1112233321 123689999998 99
Q ss_pred EEEEccCC
Q 009982 414 ILIGSSGV 421 (521)
Q Consensus 414 vLIG~S~~ 421 (521)
|+.-..-+
T Consensus 224 vvyt~~~q 231 (310)
T 3csu_A 224 ILYMTRVQ 231 (310)
T ss_dssp EEEECC--
T ss_pred EEEECCcc
Confidence 99976543
No 492
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=51.66 E-value=14 Score=38.32 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=28.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|+|+|+|.||+..|..+.+. |- ..++.++|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-----g~-----~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-----HS-----RAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CS-----SCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhc-----CC-----CCCEEEEeCC
Confidence 35899999999999999998764 41 2478899876
No 493
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=51.44 E-value=11 Score=35.63 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=40.3
Q ss_pred cccceEEEeCcc-hHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhh------cc-ccCCC
Q 009982 329 LAEHRFLFLGAG-EAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPW------AH-EHEPV 400 (521)
Q Consensus 329 L~d~riv~~GAG-sAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~f------a~-~~~~~ 400 (521)
+...++||.||+ -.|..+|+.+++ .| .+++++|++- +.+......+ .. +..+.
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~-----~G-------~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dv~~~ 63 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVA-----AG-------DTVIGTARRT-------EALDDLVAAYPDRAEAISLDVTDG 63 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHH-----TT-------CEEEEEESSG-------GGGHHHHHHCTTTEEEEECCTTCH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHH-----CC-------CEEEEEeCCH-------HHHHHHHHhccCCceEEEeeCCCH
Confidence 456789999874 455556666554 25 3688888741 1122211111 11 11222
Q ss_pred CCHHHHhccc-----CCcEEEEccCC
Q 009982 401 NNLLDAVKVI-----KPTILIGSSGV 421 (521)
Q Consensus 401 ~~L~eav~~v-----kptvLIG~S~~ 421 (521)
.++.++++.+ ++|+||=+.+.
T Consensus 64 ~~~~~~~~~~~~~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 64 ERIDVVAADVLARYGRVDVLVNNAGR 89 (281)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 3466666655 79999977764
No 494
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=51.36 E-value=41 Score=33.17 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhcc-
Q 009982 317 GVVAALKLIGGTLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAH- 395 (521)
Q Consensus 317 gll~Alk~~g~~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~- 395 (521)
..+.|++..+ --.+++|+|+|||..|...+.+.... |. +++.+|+. ..| +...++.=|.
T Consensus 167 ta~~~l~~~~-~~~g~~VlV~GaG~vG~~~~qlak~~-----Ga-------~Vi~~~~~----~~~---~~~~~~lGa~~ 226 (360)
T 1piw_A 167 TVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAM-----GA-------ETYVISRS----SRK---REDAMKMGADH 226 (360)
T ss_dssp HHHHHHHHTT-CSTTCEEEEECCSHHHHHHHHHHHHH-----TC-------EEEEEESS----STT---HHHHHHHTCSE
T ss_pred HHHHHHHHcC-CCCCCEEEEECCCHHHHHHHHHHHHC-----CC-------EEEEEcCC----HHH---HHHHHHcCCCE
Confidence 3355565532 23568999999998888777665432 52 48888752 222 1111110011
Q ss_pred --ccCCCCCHHHHhcccCCcEEEEccCC--CCCCCHHHHHHHH
Q 009982 396 --EHEPVNNLLDAVKVIKPTILIGSSGV--GRTFTKEVIEAMA 434 (521)
Q Consensus 396 --~~~~~~~L~eav~~vkptvLIG~S~~--~g~Ft~evv~~Ma 434 (521)
+.....++.+.++. +.|++|=+++. +..+ ++.++.|+
T Consensus 227 v~~~~~~~~~~~~~~~-~~D~vid~~g~~~~~~~-~~~~~~l~ 267 (360)
T 1piw_A 227 YIATLEEGDWGEKYFD-TFDLIVVCASSLTDIDF-NIMPKAMK 267 (360)
T ss_dssp EEEGGGTSCHHHHSCS-CEEEEEECCSCSTTCCT-TTGGGGEE
T ss_pred EEcCcCchHHHHHhhc-CCCEEEECCCCCcHHHH-HHHHHHhc
Confidence 11111155555552 58888877764 3233 34455554
No 495
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=51.14 E-value=6.8 Score=38.66 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=51.8
Q ss_pred ceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCccccCCccCCchhchhhccccCCCCCHHHHhcccC
Q 009982 332 HRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVNNLLDAVKVIK 411 (521)
Q Consensus 332 ~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi~~~R~~~l~~~k~~fa~~~~~~~~L~eav~~vk 411 (521)
.||.|+|+|..|...++.+... ..+. +-+.++|++ . +......+.|-.......++.|+++.-+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~---~~~~------~l~av~d~~----~---~~~~~~~~~~g~~~~~~~~~~~ll~~~~ 66 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNK---LSGA------EIVAVTDVN----Q---EAAQKVVEQYQLNATVYPNDDSLLADEN 66 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT---CSSE------EEEEEECSS----H---HHHHHHHHHTTCCCEEESSHHHHHHCTT
T ss_pred EEEEEECccHHHHHHHHHHHhh---CCCc------EEEEEEcCC----H---HHHHHHHHHhCCCCeeeCCHHHHhcCCC
Confidence 5899999999888766655421 1121 223466652 1 1122222222101122478999999878
Q ss_pred CcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009982 412 PTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (521)
Q Consensus 412 ptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (521)
+|+++ +++++ ....++++...+.. ++|+.
T Consensus 67 ~D~V~-i~tp~-~~h~~~~~~al~~G-k~vl~ 95 (344)
T 3mz0_A 67 VDAVL-VTSWG-PAHESSVLKAIKAQ-KYVFC 95 (344)
T ss_dssp CCEEE-ECSCG-GGHHHHHHHHHHTT-CEEEE
T ss_pred CCEEE-ECCCc-hhHHHHHHHHHHCC-CcEEE
Confidence 89888 44433 56667766655433 55553
No 496
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=50.95 E-value=9.6 Score=38.06 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=53.0
Q ss_pred cccceEEEeC-cchHHHH-HH----HHHHHHHHHhcCCChhhhcCc----EEEEecCCccccCCccCCchhchhhcccc-
Q 009982 329 LAEHRFLFLG-AGEAGTG-IA----ELIALEISKQTKAPVEETRKK----ICLVDSKGLIVSSRKDSLQHFKKPWAHEH- 397 (521)
Q Consensus 329 L~d~riv~~G-AGsAg~G-ia----~ll~~~~~~~~G~~~eeA~~~----i~lvDs~GLi~~~R~~~l~~~k~~fa~~~- 397 (521)
.+..||.|+| +|..|.. .+ +.+... .++.... ... +.++|++ .+ ..+.+|...
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~----~~~~l~~-~~~~~~~~av~~~~-------~~----~a~~~a~~~~ 67 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQ----GGVRLKN-GDRIMPDPILVGRS-------AE----KVEALAKRFN 67 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHH----TSEECTT-SCEEEEEEEEECSS-------SH----HHHHHHHHTT
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhc----CceeecC-CcccceeeEEEcCC-------HH----HHHHHHHHhC
Confidence 3456999999 9999987 66 444332 2221100 011 1244442 11 122333321
Q ss_pred -CC-CCCHHHHhcccCCcEEEEccCCCCCCCHHHHHHHHcCCCCcEEE
Q 009982 398 -EP-VNNLLDAVKVIKPTILIGSSGVGRTFTKEVIEAMASFNEKPLIL 443 (521)
Q Consensus 398 -~~-~~~L~eav~~vkptvLIG~S~~~g~Ft~evv~~Ma~~~erPIIF 443 (521)
+. ..++.|.++.-++|+++ +.+.. .+..+++++..+. .++|+.
T Consensus 68 ~~~~~~~~~~ll~~~~iD~V~-i~tp~-~~h~~~~~~al~~-Gk~V~~ 112 (383)
T 3oqb_A 68 IARWTTDLDAALADKNDTMFF-DAATT-QARPGLLTQAINA-GKHVYC 112 (383)
T ss_dssp CCCEESCHHHHHHCSSCCEEE-ECSCS-SSSHHHHHHHHTT-TCEEEE
T ss_pred CCcccCCHHHHhcCCCCCEEE-ECCCc-hHHHHHHHHHHHC-CCeEEE
Confidence 12 37899999988899888 55544 5667776554443 356654
No 497
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=50.90 E-value=16 Score=37.28 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=26.1
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
..+|+|+|||.+|+..|..|.+. | .++.++++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~-----g-------~~v~vlE~~ 65 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA-----G-------HQVTVLEAS 65 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH-----T-------CEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-----C-------CeEEEEECC
Confidence 46899999999999999998764 5 356666664
No 498
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=50.83 E-value=11 Score=44.04 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=33.4
Q ss_pred CcccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecC
Q 009982 328 TLAEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSK 375 (521)
Q Consensus 328 ~L~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~ 375 (521)
+|++.||+++|||.-|+-+++.|+.+ |+.-. -..+|.++|.+
T Consensus 422 kL~~~~VlvVGaGGlGsevlk~La~~-----Gv~~g-~~G~i~lvD~D 463 (1015)
T 3cmm_A 422 KIANSKVFLVGSGAIGCEMLKNWALL-----GLGSG-SDGYIVVTDND 463 (1015)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHH-----TTTCS-TTCEEEEECCC
T ss_pred HHhcCeEEEEecCHHHHHHHHHHHHc-----CcCcC-CCCeEEEEeCC
Confidence 46778999999999999999999887 54111 12689999986
No 499
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=50.71 E-value=14 Score=36.78 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=27.1
Q ss_pred ccceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCC
Q 009982 330 AEHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKG 376 (521)
Q Consensus 330 ~d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~G 376 (521)
+..+|+|+|||.||+..|..|.+. |. .++.++++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-----g~------~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-----GF------HDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-----TC------CCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-----CC------CcEEEEECCC
Confidence 456899999999999999988653 41 3567776643
No 500
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=50.23 E-value=12 Score=38.29 Aligned_cols=36 Identities=19% Similarity=0.376 Sum_probs=29.0
Q ss_pred cceEEEeCcchHHHHHHHHHHHHHHHhcCCChhhhcCcEEEEecCCcc
Q 009982 331 EHRFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKICLVDSKGLI 378 (521)
Q Consensus 331 d~riv~~GAGsAg~Gia~ll~~~~~~~~G~~~eeA~~~i~lvDs~GLi 378 (521)
+.+|+|+|||-+|+..|-.|.+. | +++.++|++.-+
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~-----G-------~~V~vlE~~~~~ 46 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVD-----G-------KKVLHIDKQDHY 46 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-----T-------CCEEEECSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-----C-------CeEEEEeCCCCC
Confidence 46799999999999999888763 5 478899987543
Done!