Query 009987
Match_columns 521
No_of_seqs 461 out of 2500
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 17:23:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qcp_A QSOX from trypanosoma b 100.0 5E-77 1.7E-81 630.9 18.4 381 44-459 21-429 (470)
2 3t58_A Sulfhydryl oxidase 1; o 100.0 1E-75 3.4E-80 634.9 26.8 375 43-451 9-514 (519)
3 3llk_A Sulfhydryl oxidase 1; d 100.0 3E-64 1E-68 490.7 13.2 226 205-451 17-256 (261)
4 1jr8_A ERV2 protein, mitochond 99.9 4.8E-27 1.7E-31 203.2 9.7 87 311-397 10-99 (117)
5 2hj3_A Sulfhydryl oxidase ERV1 99.9 3.1E-27 1.1E-31 206.6 6.4 105 308-413 9-116 (125)
6 3gwn_A Probable FAD-linked sul 99.9 4.7E-25 1.6E-29 190.2 7.9 77 315-391 12-96 (114)
7 3gwl_A P14, FAD-linked sulfhyd 99.9 2.2E-24 7.7E-29 183.4 9.0 82 315-397 10-95 (106)
8 4e0h_A Mitochondrial FAD-linke 99.9 1.1E-22 3.9E-27 173.4 9.6 78 315-392 10-90 (106)
9 3u5s_A FAD-linked sulfhydryl o 99.9 7.9E-22 2.7E-26 172.8 9.6 82 315-396 26-110 (126)
10 3zzx_A Thioredoxin; oxidoreduc 99.8 2.7E-20 9.1E-25 158.8 11.4 98 52-173 7-104 (105)
11 3h79_A Thioredoxin-like protei 99.8 1.4E-19 4.8E-24 158.6 14.7 114 44-173 13-126 (127)
12 4e0i_A Mitochondrial FAD-linke 99.8 2.7E-20 9.2E-25 173.4 9.3 83 312-394 90-175 (189)
13 3ga4_A Dolichyl-diphosphooligo 99.8 6.2E-19 2.1E-23 163.9 14.8 132 45-181 17-159 (178)
14 3gnj_A Thioredoxin domain prot 99.8 4E-18 1.4E-22 144.6 11.7 107 46-175 4-110 (111)
15 3uvt_A Thioredoxin domain-cont 99.8 5.2E-18 1.8E-22 143.8 11.9 107 45-173 4-110 (111)
16 2qsi_A Putative hydrogenase ex 99.7 3.4E-18 1.2E-22 151.8 10.3 106 46-174 15-122 (137)
17 3qfa_C Thioredoxin; protein-pr 99.7 3.3E-18 1.1E-22 147.7 9.8 106 45-174 11-116 (116)
18 2trx_A Thioredoxin; electron t 99.7 8.6E-18 2.9E-22 142.0 12.0 106 46-174 2-107 (108)
19 2voc_A Thioredoxin; electron t 99.7 5.4E-18 1.8E-22 145.1 10.7 104 48-176 3-106 (112)
20 3tco_A Thioredoxin (TRXA-1); d 99.7 1.1E-17 3.7E-22 141.2 12.2 106 45-174 3-108 (109)
21 2av4_A Thioredoxin-like protei 99.7 3.2E-18 1.1E-22 154.6 9.1 113 48-175 23-139 (160)
22 3die_A Thioredoxin, TRX; elect 99.7 9.5E-18 3.2E-22 141.0 11.5 103 47-174 4-106 (106)
23 2dj1_A Protein disulfide-isome 99.7 1.1E-17 3.8E-22 148.4 12.4 113 44-178 15-127 (140)
24 3ed3_A Protein disulfide-isome 99.7 8.4E-18 2.9E-22 169.7 12.6 130 41-178 12-145 (298)
25 2qgv_A Hydrogenase-1 operon pr 99.7 3E-18 1E-22 152.7 8.0 105 47-175 18-125 (140)
26 2dml_A Protein disulfide-isome 99.7 1.7E-17 5.7E-22 145.3 12.1 111 43-175 14-124 (130)
27 3p2a_A Thioredoxin 2, putative 99.7 1.9E-17 6.4E-22 148.9 12.7 110 43-176 35-144 (148)
28 2pu9_C TRX-F, thioredoxin F-ty 99.7 2E-17 6.7E-22 141.0 11.9 107 45-174 4-110 (111)
29 1mek_A Protein disulfide isome 99.7 4.5E-18 1.5E-22 145.9 7.9 116 43-177 4-119 (120)
30 2ppt_A Thioredoxin-2; thiredox 99.7 1.6E-17 5.6E-22 151.3 11.9 109 44-176 45-153 (155)
31 3hxs_A Thioredoxin, TRXP; elec 99.7 1.9E-17 6.6E-22 147.2 11.7 111 43-175 19-139 (141)
32 3q6o_A Sulfhydryl oxidase 1; p 99.7 3E-17 1E-21 160.3 13.9 121 43-177 9-129 (244)
33 2i4a_A Thioredoxin; acidophIle 99.7 3.3E-17 1.1E-21 137.9 12.2 105 46-173 2-106 (107)
34 3qou_A Protein YBBN; thioredox 99.7 1.7E-17 5.8E-22 165.5 12.1 109 45-175 6-114 (287)
35 1gh2_A Thioredoxin-like protei 99.7 3E-17 1E-21 138.8 11.7 104 48-175 3-107 (107)
36 1w4v_A Thioredoxin, mitochondr 99.7 2.8E-17 9.6E-22 142.3 11.6 109 44-175 11-119 (119)
37 1nsw_A Thioredoxin, TRX; therm 99.7 2E-17 7E-22 139.0 10.5 103 48-174 2-104 (105)
38 1thx_A Thioredoxin, thioredoxi 99.7 4E-17 1.4E-21 139.2 12.3 108 45-175 6-113 (115)
39 1x5d_A Protein disulfide-isome 99.7 2.3E-17 7.7E-22 144.8 11.0 114 44-176 5-118 (133)
40 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.7E-17 5.9E-22 148.0 10.1 110 44-176 4-113 (140)
41 2yzu_A Thioredoxin; redox prot 99.7 4.2E-17 1.4E-21 137.3 11.7 106 47-176 2-107 (109)
42 1t00_A Thioredoxin, TRX; redox 99.7 4.2E-17 1.4E-21 138.9 11.7 106 47-175 6-111 (112)
43 1x5e_A Thioredoxin domain cont 99.7 3.4E-17 1.2E-21 142.8 11.5 108 44-177 5-112 (126)
44 1dby_A Chloroplast thioredoxin 99.7 3.9E-17 1.3E-21 137.8 11.2 104 48-174 3-106 (107)
45 3aps_A DNAJ homolog subfamily 99.7 3.8E-17 1.3E-21 141.4 11.4 107 46-175 3-113 (122)
46 2e0q_A Thioredoxin; electron t 99.7 5.3E-17 1.8E-21 135.3 11.8 103 48-175 1-103 (104)
47 2o8v_B Thioredoxin 1; disulfid 99.7 2.6E-17 9E-22 144.8 9.8 106 46-174 22-127 (128)
48 2l5l_A Thioredoxin; structural 99.7 7.7E-17 2.6E-21 143.0 12.7 110 45-177 8-128 (136)
49 2b5e_A Protein disulfide-isome 99.7 6.3E-17 2.2E-21 174.5 14.5 117 41-178 9-125 (504)
50 1fb6_A Thioredoxin M; electron 99.7 8.7E-17 3E-21 134.8 11.9 104 48-174 2-105 (105)
51 2r2j_A Thioredoxin domain-cont 99.7 4.5E-17 1.5E-21 169.8 12.2 116 46-178 5-120 (382)
52 1faa_A Thioredoxin F; electron 99.7 7.8E-17 2.7E-21 140.0 11.6 107 45-174 17-123 (124)
53 1xwb_A Thioredoxin; dimerizati 99.7 8.2E-17 2.8E-21 135.2 11.3 104 48-174 2-106 (106)
54 3d6i_A Monothiol glutaredoxin- 99.7 4.4E-17 1.5E-21 138.9 9.7 106 48-175 2-109 (112)
55 1ep7_A Thioredoxin CH1, H-type 99.7 5.5E-17 1.9E-21 138.0 9.4 106 47-175 3-111 (112)
56 3f3q_A Thioredoxin-1; His TAG, 99.7 1.3E-16 4.5E-21 135.9 11.6 102 47-174 8-109 (109)
57 3m9j_A Thioredoxin; oxidoreduc 99.7 1.1E-16 3.8E-21 134.3 11.0 99 52-174 7-105 (105)
58 4euy_A Uncharacterized protein 99.7 1.7E-17 5.8E-22 140.2 6.0 98 52-174 7-104 (105)
59 2i1u_A Thioredoxin, TRX, MPT46 99.7 8.4E-17 2.9E-21 138.7 10.4 109 44-175 10-118 (121)
60 2dj0_A Thioredoxin-related tra 99.7 9.7E-18 3.3E-22 148.9 4.5 88 45-140 6-99 (137)
61 3us3_A Calsequestrin-1; calciu 99.7 1E-16 3.5E-21 166.3 12.8 112 43-178 10-127 (367)
62 2vlu_A Thioredoxin, thioredoxi 99.7 1.1E-16 3.9E-21 138.4 11.1 108 45-176 12-121 (122)
63 2dj3_A Protein disulfide-isome 99.7 2.7E-17 9.1E-22 144.6 7.1 115 44-177 5-120 (133)
64 1r26_A Thioredoxin; redox-acti 99.7 1.3E-16 4.5E-21 139.9 11.5 105 45-175 18-123 (125)
65 3gix_A Thioredoxin-like protei 99.7 8E-17 2.7E-21 145.8 10.4 112 50-174 8-120 (149)
66 2xc2_A Thioredoxinn; oxidoredu 99.7 1E-16 3.5E-21 137.9 10.5 103 47-174 14-117 (117)
67 3apq_A DNAJ homolog subfamily 99.7 1.5E-16 5.2E-21 151.8 12.6 112 43-178 94-205 (210)
68 1xfl_A Thioredoxin H1; AT3G510 99.7 2.1E-16 7.2E-21 138.1 12.0 109 42-174 12-123 (124)
69 2djj_A PDI, protein disulfide- 99.7 6.6E-17 2.3E-21 139.6 8.3 114 44-176 5-118 (121)
70 2vim_A Thioredoxin, TRX; thior 99.7 2.7E-16 9.4E-21 131.5 11.6 102 49-174 2-104 (104)
71 3idv_A Protein disulfide-isome 99.7 1.8E-16 6.2E-21 153.3 12.0 111 44-176 13-123 (241)
72 1syr_A Thioredoxin; SGPP, stru 99.7 2.8E-16 9.7E-21 134.2 11.0 105 44-174 7-111 (112)
73 1sji_A Calsequestrin 2, calseq 99.7 1.4E-16 4.9E-21 163.9 10.8 110 44-178 9-125 (350)
74 1oaz_A Thioredoxin 1; immune s 99.7 4.1E-17 1.4E-21 142.7 5.5 106 46-174 3-122 (123)
75 3ul3_B Thioredoxin, thioredoxi 99.7 1.2E-16 4.2E-21 140.0 8.5 86 65-172 42-127 (128)
76 3f8u_A Protein disulfide-isome 99.7 1.8E-16 6.2E-21 169.7 11.6 110 47-178 2-112 (481)
77 3dxb_A Thioredoxin N-terminall 99.7 2.1E-16 7.3E-21 152.3 10.8 112 43-177 9-120 (222)
78 3cxg_A Putative thioredoxin; m 99.7 1.7E-16 5.9E-21 140.5 9.2 109 45-176 19-130 (133)
79 2wz9_A Glutaredoxin-3; protein 99.7 3.8E-16 1.3E-20 141.5 11.5 108 46-177 12-120 (153)
80 3td7_A FAD-linked sulfhydryl o 99.7 8.4E-17 2.9E-21 155.8 7.5 77 315-391 46-130 (295)
81 1v98_A Thioredoxin; oxidoreduc 99.7 3.5E-16 1.2E-20 139.2 10.8 106 46-175 33-138 (140)
82 3emx_A Thioredoxin; structural 99.7 1.4E-16 4.9E-21 141.2 8.2 106 45-176 15-127 (135)
83 3idv_A Protein disulfide-isome 99.7 7E-16 2.4E-20 149.2 13.3 112 44-177 128-239 (241)
84 1zma_A Bacterocin transport ac 99.6 3.5E-16 1.2E-20 134.9 9.4 103 47-171 13-117 (118)
85 2l6c_A Thioredoxin; oxidoreduc 99.6 3.6E-16 1.2E-20 133.4 9.1 103 48-176 5-107 (110)
86 2oe3_A Thioredoxin-3; electron 99.6 6E-16 2E-20 133.2 10.5 103 44-172 10-113 (114)
87 2l57_A Uncharacterized protein 99.6 5.2E-16 1.8E-20 135.3 9.5 109 48-176 6-118 (126)
88 1qgv_A Spliceosomal protein U5 99.6 5.1E-16 1.8E-20 139.3 9.4 111 52-175 10-121 (142)
89 3evi_A Phosducin-like protein 99.6 6.1E-16 2.1E-20 134.6 9.4 106 47-172 4-111 (118)
90 2es7_A Q8ZP25_salty, putative 99.6 4.7E-16 1.6E-20 139.8 8.3 107 47-178 18-128 (142)
91 3d22_A TRXH4, thioredoxin H-ty 99.6 1.1E-15 3.6E-20 135.6 9.6 108 45-176 23-133 (139)
92 2c0g_A ERP29 homolog, windbeut 99.6 2.8E-15 9.6E-20 146.8 13.4 115 41-177 11-134 (248)
93 2vm1_A Thioredoxin, thioredoxi 99.6 1.6E-15 5.4E-20 130.0 10.0 107 46-176 6-115 (118)
94 2dbc_A PDCL2, unnamed protein 99.6 2.7E-15 9.2E-20 133.2 11.8 104 45-174 9-120 (135)
95 1ti3_A Thioredoxin H, PTTRXH1; 99.6 1.6E-15 5.5E-20 128.9 9.8 105 47-175 5-112 (113)
96 2kuc_A Putative disulphide-iso 99.6 1.3E-15 4.5E-20 133.1 9.0 109 48-176 8-122 (130)
97 2j23_A Thioredoxin; immune pro 99.6 1.4E-15 4.9E-20 131.9 8.8 104 47-174 16-120 (121)
98 3uem_A Protein disulfide-isome 99.6 2.2E-15 7.5E-20 155.2 11.7 111 44-175 247-357 (361)
99 2fwh_A Thiol:disulfide interch 99.6 3.4E-15 1.2E-19 132.1 11.0 107 50-175 16-128 (134)
100 2f51_A Thioredoxin; electron t 99.6 3.5E-15 1.2E-19 129.0 9.4 109 47-176 4-114 (118)
101 3f8u_A Protein disulfide-isome 99.6 5.9E-15 2E-19 158.0 12.4 125 37-181 342-467 (481)
102 2yj7_A LPBCA thioredoxin; oxid 99.3 2.3E-16 7.8E-21 131.9 0.0 103 48-173 3-105 (106)
103 2qc7_A ERP31, ERP28, endoplasm 99.6 1.8E-14 6E-19 140.6 12.7 108 45-174 4-118 (240)
104 3apo_A DNAJ homolog subfamily 99.6 3.3E-15 1.1E-19 169.4 8.5 112 43-178 113-224 (780)
105 1a8l_A Protein disulfide oxido 99.5 1.5E-14 5.2E-19 138.7 11.1 108 48-174 118-225 (226)
106 1wou_A Thioredoxin -related pr 99.5 2.2E-14 7.5E-19 124.9 8.9 105 47-172 6-122 (123)
107 2b5e_A Protein disulfide-isome 99.5 2.9E-14 9.9E-19 153.6 11.4 114 45-178 357-470 (504)
108 3fk8_A Disulphide isomerase; A 99.5 2.2E-14 7.4E-19 126.1 7.9 100 54-173 16-131 (133)
109 1wmj_A Thioredoxin H-type; str 99.5 3.8E-15 1.3E-19 130.0 2.7 108 45-176 13-123 (130)
110 2trc_P Phosducin, MEKA, PP33; 99.5 9.8E-15 3.4E-19 140.5 5.4 104 46-173 99-211 (217)
111 1a0r_P Phosducin, MEKA, PP33; 99.5 3.2E-14 1.1E-18 139.1 7.9 110 46-173 112-224 (245)
112 1fo5_A Thioredoxin; disulfide 99.5 5.5E-14 1.9E-18 113.1 6.6 83 66-174 3-85 (85)
113 2lst_A Thioredoxin; structural 99.2 5E-15 1.7E-19 129.6 0.0 94 65-176 19-117 (130)
114 2ywm_A Glutaredoxin-like prote 99.5 2.3E-13 7.8E-18 130.9 11.0 102 47-175 119-220 (229)
115 1nho_A Probable thioredoxin; b 99.4 6.3E-14 2.1E-18 112.8 5.8 81 68-174 4-84 (85)
116 3f9u_A Putative exported cytoc 99.4 7.2E-14 2.5E-18 128.5 6.6 106 48-175 28-166 (172)
117 2ju5_A Thioredoxin disulfide i 99.4 3.2E-13 1.1E-17 122.4 10.3 101 54-175 34-152 (154)
118 3kp8_A Vkorc1/thioredoxin doma 99.4 2.6E-14 8.9E-19 121.7 2.8 75 66-171 13-91 (106)
119 2b5x_A YKUV protein, TRXY; thi 99.4 1.1E-12 3.9E-17 116.0 11.7 105 49-175 15-145 (148)
120 2djk_A PDI, protein disulfide- 99.4 5.2E-13 1.8E-17 118.0 8.9 106 47-178 7-118 (133)
121 3apo_A DNAJ homolog subfamily 99.4 8.3E-13 2.8E-17 149.7 12.8 113 46-176 543-657 (780)
122 3iv4_A Putative oxidoreductase 99.4 5.5E-13 1.9E-17 113.8 8.5 98 48-170 8-111 (112)
123 2hls_A Protein disulfide oxido 99.4 1.3E-12 4.3E-17 127.8 12.2 105 51-178 125-229 (243)
124 3dml_A Putative uncharacterize 99.4 6.2E-14 2.1E-18 121.1 2.5 92 66-175 19-110 (116)
125 1zzo_A RV1677; thioredoxin fol 99.4 9.6E-13 3.3E-17 114.6 9.5 104 48-175 10-135 (136)
126 2ywm_A Glutaredoxin-like prote 99.4 7.8E-13 2.7E-17 127.2 9.3 101 54-175 9-115 (229)
127 1lu4_A Soluble secreted antige 99.4 1E-12 3.5E-17 114.7 9.0 89 64-174 23-135 (136)
128 1a8l_A Protein disulfide oxido 99.4 9.8E-13 3.4E-17 126.0 8.9 102 53-174 9-112 (226)
129 3erw_A Sporulation thiol-disul 99.4 1.1E-12 3.9E-17 115.6 8.6 88 64-170 33-144 (145)
130 3raz_A Thioredoxin-related pro 99.4 3.2E-12 1.1E-16 114.5 11.7 97 60-175 19-140 (151)
131 2f9s_A Thiol-disulfide oxidore 99.4 1.8E-12 6.1E-17 115.9 9.7 94 64-176 25-139 (151)
132 2h30_A Thioredoxin, peptide me 99.3 1.6E-12 5.5E-17 117.7 8.6 108 47-175 22-156 (164)
133 3or5_A Thiol:disulfide interch 99.3 3.7E-12 1.3E-16 115.2 10.6 107 47-176 18-152 (165)
134 3lor_A Thiol-disulfide isomera 99.3 4.2E-12 1.4E-16 114.4 10.6 93 64-175 29-155 (160)
135 1ilo_A Conserved hypothetical 99.3 2.6E-12 9E-17 101.5 7.6 74 68-170 2-76 (77)
136 1sen_A Thioredoxin-like protei 99.3 6E-13 2.1E-17 122.0 4.4 108 54-175 37-148 (164)
137 3fkf_A Thiol-disulfide oxidore 99.3 4.1E-12 1.4E-16 112.5 8.9 91 63-175 31-146 (148)
138 4evm_A Thioredoxin family prot 99.3 4.8E-12 1.6E-16 109.9 9.1 90 63-172 20-136 (138)
139 1z6n_A Hypothetical protein PA 99.3 3.2E-12 1.1E-16 117.8 8.2 79 49-138 39-120 (167)
140 3eyt_A Uncharacterized protein 99.3 8.8E-12 3E-16 112.1 10.9 96 62-176 25-153 (158)
141 2lja_A Putative thiol-disulfid 99.3 5.8E-12 2E-16 112.4 9.5 108 48-176 15-144 (152)
142 3hcz_A Possible thiol-disulfid 99.3 5.1E-12 1.7E-16 111.9 7.4 104 48-174 16-145 (148)
143 2l5o_A Putative thioredoxin; s 99.3 8E-12 2.7E-16 111.7 8.6 94 64-176 27-142 (153)
144 2lrn_A Thiol:disulfide interch 99.3 1.5E-11 5.3E-16 110.2 10.2 91 64-176 28-142 (152)
145 3ph9_A Anterior gradient prote 99.2 5.1E-12 1.7E-16 114.5 6.2 88 65-175 44-145 (151)
146 3ewl_A Uncharacterized conserv 99.2 1.4E-11 4.9E-16 108.7 8.2 103 48-174 12-140 (142)
147 1i5g_A Tryparedoxin II; electr 99.2 2.6E-11 8.8E-16 107.6 9.4 88 47-141 12-123 (144)
148 3ia1_A THIO-disulfide isomeras 99.2 2.7E-11 9.2E-16 108.4 9.1 104 48-176 16-145 (154)
149 3uem_A Protein disulfide-isome 99.2 3.8E-11 1.3E-15 123.4 11.3 112 45-177 116-232 (361)
150 3gl3_A Putative thiol:disulfid 99.2 5.7E-11 1.9E-15 105.9 10.9 98 61-177 24-144 (152)
151 3eur_A Uncharacterized protein 99.2 3.9E-11 1.3E-15 106.3 8.6 101 48-172 16-142 (142)
152 3ira_A Conserved protein; meth 99.2 1.5E-11 5.3E-16 113.8 6.0 80 50-140 26-117 (173)
153 1o8x_A Tryparedoxin, TRYX, TXN 99.2 5.8E-11 2E-15 105.6 9.6 77 60-141 23-123 (146)
154 3hdc_A Thioredoxin family prot 99.2 6.2E-11 2.1E-15 107.0 9.3 106 48-174 26-151 (158)
155 3fw2_A Thiol-disulfide oxidore 99.2 9.9E-11 3.4E-15 104.6 10.3 91 62-174 30-147 (150)
156 3lwa_A Secreted thiol-disulfid 99.2 6.7E-11 2.3E-15 109.4 9.3 112 48-175 42-181 (183)
157 3s9f_A Tryparedoxin; thioredox 99.2 8.7E-11 3E-15 107.4 9.6 76 61-141 44-143 (165)
158 1o73_A Tryparedoxin; electron 99.2 7E-11 2.4E-15 104.5 8.6 76 61-141 24-123 (144)
159 3ha9_A Uncharacterized thiored 99.1 1.3E-10 4.4E-15 105.4 10.2 103 48-175 22-164 (165)
160 2lrt_A Uncharacterized protein 99.1 9.9E-11 3.4E-15 105.3 9.3 87 64-169 34-142 (152)
161 1kng_A Thiol:disulfide interch 99.1 6.3E-11 2.2E-15 106.0 7.3 89 65-175 42-152 (156)
162 3kcm_A Thioredoxin family prot 99.1 9.2E-11 3.2E-15 104.8 8.4 107 48-175 13-143 (154)
163 2b1k_A Thiol:disulfide interch 99.1 7.1E-11 2.4E-15 107.5 6.9 89 64-175 50-160 (168)
164 3kp9_A Vkorc1/thioredoxin doma 99.1 2.9E-11 1E-15 120.7 4.6 83 54-171 190-276 (291)
165 2cvb_A Probable thiol-disulfid 99.1 1.9E-10 6.6E-15 106.8 9.4 105 60-176 28-160 (188)
166 1jfu_A Thiol:disulfide interch 99.1 3.3E-10 1.1E-14 104.9 10.6 108 48-176 45-181 (186)
167 2fgx_A Putative thioredoxin; N 99.1 1.5E-10 5.2E-15 98.4 7.4 77 67-170 30-106 (107)
168 3kh7_A Thiol:disulfide interch 99.1 1.6E-10 5.3E-15 106.8 7.8 92 61-175 54-167 (176)
169 2ywi_A Hypothetical conserved 99.1 9.5E-11 3.2E-15 109.4 6.4 101 65-176 45-175 (196)
170 2hyx_A Protein DIPZ; thioredox 99.1 3E-10 1E-14 116.7 10.0 97 60-175 77-199 (352)
171 4fo5_A Thioredoxin-like protei 99.0 2.7E-10 9.2E-15 100.9 7.6 75 60-140 27-126 (143)
172 2lus_A Thioredoxion; CR-Trp16, 98.6 2.2E-11 7.5E-16 107.4 0.0 74 64-141 24-122 (143)
173 2ggt_A SCO1 protein homolog, m 99.0 4.8E-10 1.6E-14 101.2 8.5 98 63-175 21-161 (164)
174 2dlx_A UBX domain-containing p 99.0 5.3E-10 1.8E-14 101.4 8.7 106 53-177 28-138 (153)
175 1ttz_A Conserved hypothetical 99.0 2.5E-10 8.7E-15 93.4 5.4 74 69-174 3-76 (87)
176 3u5r_E Uncharacterized protein 99.0 7.6E-10 2.6E-14 105.9 9.1 118 47-176 42-188 (218)
177 3cmi_A Peroxiredoxin HYR1; thi 99.0 6.8E-10 2.3E-14 101.6 7.7 106 48-175 17-168 (171)
178 2rli_A SCO2 protein homolog, m 99.0 1.3E-09 4.3E-14 99.2 9.0 100 61-175 22-164 (171)
179 2hls_A Protein disulfide oxido 98.9 2.4E-09 8.3E-14 104.4 10.7 98 54-174 15-116 (243)
180 2p5q_A Glutathione peroxidase 98.9 1.3E-09 4.3E-14 99.0 8.0 95 62-175 29-168 (170)
181 2vup_A Glutathione peroxidase- 98.9 1.3E-09 4.4E-14 101.8 8.1 107 48-175 33-185 (190)
182 3dwv_A Glutathione peroxidase- 98.9 1.1E-09 3.7E-14 102.1 7.3 108 47-175 30-183 (187)
183 2p31_A CL683, glutathione pero 98.9 1.4E-09 4.8E-14 100.7 6.3 58 48-113 34-91 (181)
184 2v1m_A Glutathione peroxidase; 98.9 2.8E-09 9.5E-14 96.6 8.2 47 61-113 27-73 (169)
185 2ls5_A Uncharacterized protein 98.4 1.7E-10 5.8E-15 104.0 0.0 74 62-140 30-127 (159)
186 3drn_A Peroxiredoxin, bacterio 98.9 5E-09 1.7E-13 94.9 9.1 86 48-141 13-124 (161)
187 3kij_A Probable glutathione pe 98.9 3.7E-09 1.3E-13 97.7 8.1 59 47-113 22-80 (180)
188 2k6v_A Putative cytochrome C o 98.9 2.2E-09 7.4E-14 97.6 6.1 98 60-173 30-171 (172)
189 2e7p_A Glutaredoxin; thioredox 98.9 9.8E-10 3.3E-14 93.8 3.5 87 55-173 12-106 (116)
190 2f8a_A Glutathione peroxidase 98.8 5E-09 1.7E-13 99.6 7.9 46 62-113 44-89 (208)
191 2obi_A PHGPX, GPX-4, phospholi 98.8 4.5E-09 1.5E-13 97.3 6.8 58 48-113 32-89 (183)
192 1xvw_A Hypothetical protein RV 98.8 4.9E-09 1.7E-13 94.4 6.5 73 63-141 33-135 (160)
193 2gs3_A PHGPX, GPX-4, phospholi 98.8 7.5E-09 2.5E-13 96.1 7.5 72 48-127 34-114 (185)
194 1we0_A Alkyl hydroperoxide red 98.8 6.6E-09 2.3E-13 96.5 7.0 95 62-175 28-157 (187)
195 2bmx_A Alkyl hydroperoxidase C 98.8 9.2E-09 3.1E-13 96.3 7.6 95 62-175 42-170 (195)
196 2k8s_A Thioredoxin; dimer, str 98.8 5.1E-09 1.7E-13 83.6 5.0 61 69-139 4-64 (80)
197 1zof_A Alkyl hydroperoxide-red 98.7 8.7E-09 3E-13 96.7 6.3 92 64-174 32-160 (198)
198 1eej_A Thiol:disulfide interch 98.7 1.9E-08 6.6E-13 96.1 8.4 86 64-174 85-210 (216)
199 1wjk_A C330018D20RIK protein; 98.7 9.7E-09 3.3E-13 86.0 5.4 81 66-175 16-96 (100)
200 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.3E-08 1.1E-12 106.8 10.6 96 49-172 102-197 (521)
201 1qmv_A Human thioredoxin perox 98.7 3.1E-08 1.1E-12 92.9 8.7 93 63-174 32-162 (197)
202 3gyk_A 27KDA outer membrane pr 98.7 5.5E-08 1.9E-12 89.1 9.8 86 63-174 20-172 (175)
203 2b7k_A SCO1 protein; metalloch 98.7 2.7E-08 9.3E-13 93.6 7.5 111 47-175 25-179 (200)
204 1ego_A Glutaredoxin; electron 98.7 5.8E-08 2E-12 77.8 8.1 77 69-174 3-83 (85)
205 1uul_A Tryparedoxin peroxidase 98.6 4.2E-08 1.4E-12 92.4 7.9 96 64-174 35-164 (202)
206 1zye_A Thioredoxin-dependent p 98.6 4.3E-08 1.5E-12 93.9 7.7 98 62-174 53-184 (220)
207 1xzo_A BSSCO, hypothetical pro 98.6 4.7E-08 1.6E-12 88.9 7.6 48 62-113 30-78 (174)
208 2h01_A 2-Cys peroxiredoxin; th 98.6 5.4E-08 1.8E-12 90.7 6.8 96 64-174 30-158 (192)
209 3gkn_A Bacterioferritin comigr 98.6 7.3E-08 2.5E-12 86.9 7.0 86 48-141 20-138 (163)
210 3ztl_A Thioredoxin peroxidase; 98.6 1.4E-07 4.9E-12 90.3 8.8 75 61-141 65-173 (222)
211 1t3b_A Thiol:disulfide interch 98.5 1.5E-07 5E-12 89.7 8.3 84 64-172 85-208 (211)
212 2i81_A 2-Cys peroxiredoxin; st 98.5 1.5E-07 5E-12 89.8 7.8 96 64-174 51-179 (213)
213 2i3y_A Epididymal secretory gl 98.5 3.3E-07 1.1E-11 87.6 10.1 57 48-113 40-97 (215)
214 2jsy_A Probable thiol peroxida 98.5 1.9E-07 6.6E-12 84.6 7.5 89 64-173 43-165 (167)
215 4g2e_A Peroxiredoxin; redox pr 98.5 3.4E-08 1.1E-12 89.4 1.8 109 48-172 15-155 (157)
216 3ixr_A Bacterioferritin comigr 98.5 2.3E-07 8E-12 85.6 7.4 87 47-141 35-154 (179)
217 4f9z_D Endoplasmic reticulum r 98.4 1.4E-06 4.9E-11 83.5 12.2 111 45-175 112-225 (227)
218 2a4v_A Peroxiredoxin DOT5; yea 98.4 2.6E-07 9.1E-12 83.1 6.7 68 66-141 36-130 (159)
219 3me7_A Putative uncharacterize 98.4 6.5E-07 2.2E-11 81.9 8.4 110 48-176 13-163 (170)
220 2r37_A Glutathione peroxidase 98.4 8.9E-07 3E-11 84.0 9.2 47 60-113 33-79 (207)
221 2pn8_A Peroxiredoxin-4; thiore 98.4 8.6E-07 2.9E-11 84.2 8.5 99 61-174 44-176 (211)
222 1xvq_A Thiol peroxidase; thior 98.3 6.8E-07 2.3E-11 82.0 7.2 71 62-141 41-142 (175)
223 2c0d_A Thioredoxin peroxidase 98.3 8.8E-07 3E-11 84.9 7.3 96 64-174 55-183 (221)
224 1v58_A Thiol:disulfide interch 98.3 1.2E-06 4.2E-11 85.0 8.0 87 65-174 97-232 (241)
225 3hd5_A Thiol:disulfide interch 98.3 1.7E-06 5.7E-11 80.7 8.6 41 65-112 25-65 (195)
226 3qpm_A Peroxiredoxin; oxidored 98.3 1.8E-06 6.1E-11 83.8 9.1 98 60-172 72-203 (240)
227 1n8j_A AHPC, alkyl hydroperoxi 98.3 1.4E-06 4.8E-11 80.9 7.8 92 64-174 29-155 (186)
228 4gqc_A Thiol peroxidase, perox 98.2 9.6E-08 3.3E-12 87.2 -0.7 112 48-175 16-160 (164)
229 1psq_A Probable thiol peroxida 98.2 1.5E-06 5E-11 78.6 6.9 45 61-113 38-83 (163)
230 3h93_A Thiol:disulfide interch 98.2 2.5E-06 8.5E-11 79.3 8.4 31 65-95 25-55 (192)
231 1nm3_A Protein HI0572; hybrid, 98.2 1.8E-06 6.1E-11 83.4 7.6 44 64-113 32-78 (241)
232 2wfc_A Peroxiredoxin 5, PRDX5; 98.2 1.5E-06 5E-11 79.5 5.7 42 65-112 31-75 (167)
233 3a2v_A Probable peroxiredoxin; 98.2 2E-06 6.8E-11 84.0 6.8 95 65-174 33-161 (249)
234 3p7x_A Probable thiol peroxida 98.2 1.4E-06 4.6E-11 79.1 5.1 105 48-171 31-164 (166)
235 1kte_A Thioltransferase; redox 98.1 8E-07 2.7E-11 74.2 2.8 70 55-140 4-78 (105)
236 1h75_A Glutaredoxin-like prote 98.1 1.7E-06 5.9E-11 68.5 4.3 53 69-134 3-56 (81)
237 3tjj_A Peroxiredoxin-4; thiore 98.1 3.9E-06 1.3E-10 82.2 6.9 98 60-172 86-217 (254)
238 1r7h_A NRDH-redoxin; thioredox 98.1 7.9E-06 2.7E-10 63.3 7.1 51 69-134 3-56 (75)
239 3zrd_A Thiol peroxidase; oxido 98.1 5.1E-06 1.7E-10 78.2 7.0 84 48-141 63-178 (200)
240 1tp9_A Peroxiredoxin, PRX D (t 98.0 5.3E-06 1.8E-10 75.0 6.5 43 64-112 34-79 (162)
241 3hz8_A Thiol:disulfide interch 98.0 1.7E-05 5.8E-10 74.1 10.1 31 65-95 24-54 (193)
242 1q98_A Thiol peroxidase, TPX; 98.0 5.2E-06 1.8E-10 75.2 6.2 45 60-112 38-83 (165)
243 3uma_A Hypothetical peroxiredo 98.0 4.9E-06 1.7E-10 77.4 6.0 43 65-113 56-101 (184)
244 2l4c_A Endoplasmic reticulum r 98.0 2.7E-05 9.3E-10 67.6 10.3 95 48-173 23-122 (124)
245 2hze_A Glutaredoxin-1; thiored 98.0 3.9E-06 1.3E-10 71.6 4.7 61 68-140 20-85 (114)
246 3mng_A Peroxiredoxin-5, mitoch 98.0 4.9E-06 1.7E-10 76.6 5.5 34 64-97 42-77 (173)
247 4f9z_D Endoplasmic reticulum r 98.0 1.3E-05 4.6E-10 76.6 8.7 98 48-176 11-113 (227)
248 1un2_A DSBA, thiol-disulfide i 98.0 7.3E-07 2.5E-11 84.0 -0.8 42 65-113 113-157 (197)
249 2znm_A Thiol:disulfide interch 98.0 1.7E-05 5.7E-10 73.7 8.3 32 64-95 21-52 (195)
250 4hde_A SCO1/SENC family lipopr 97.9 2.1E-05 7.1E-10 71.9 8.1 62 46-113 15-77 (170)
251 2cq9_A GLRX2 protein, glutared 97.9 3.5E-06 1.2E-10 73.8 2.3 69 53-140 17-90 (130)
252 2ht9_A Glutaredoxin-2; thiored 97.9 4.9E-06 1.7E-10 74.5 2.8 70 53-141 39-113 (146)
253 1z6m_A Conserved hypothetical 97.9 5.2E-05 1.8E-09 69.1 9.7 31 64-94 26-56 (175)
254 2yzh_A Probable thiol peroxida 97.8 1.8E-05 6.1E-10 71.9 5.6 65 60-132 42-108 (171)
255 1sji_A Calsequestrin 2, calseq 97.8 0.00012 4E-09 74.6 12.3 118 45-177 225-348 (350)
256 2rem_A Disulfide oxidoreductas 97.8 6.4E-05 2.2E-09 69.5 9.2 31 65-95 25-55 (193)
257 1prx_A HORF6; peroxiredoxin, h 97.8 7.6E-05 2.6E-09 71.5 9.8 41 67-113 34-74 (224)
258 1xcc_A 1-Cys peroxiredoxin; un 97.8 2.4E-05 8.2E-10 74.8 6.2 93 67-174 34-165 (220)
259 3gv1_A Disulfide interchange p 97.8 4.2E-05 1.4E-09 68.5 7.3 82 64-174 13-138 (147)
260 3c1r_A Glutaredoxin-1; oxidize 97.8 1E-05 3.4E-10 69.6 2.8 67 54-134 16-88 (118)
261 2v2g_A Peroxiredoxin 6; oxidor 97.7 5.1E-05 1.7E-09 73.2 7.9 42 66-113 30-72 (233)
262 2klx_A Glutaredoxin; thioredox 97.7 3.3E-05 1.1E-09 62.3 5.3 57 69-140 8-65 (89)
263 2pwj_A Mitochondrial peroxired 97.7 1.9E-05 6.4E-10 72.3 4.1 60 66-131 45-108 (171)
264 3l9v_A Putative thiol-disulfid 97.7 4.2E-05 1.4E-09 71.1 6.2 30 66-95 15-47 (189)
265 4dvc_A Thiol:disulfide interch 97.6 0.00024 8.2E-09 64.7 9.9 31 65-95 21-51 (184)
266 2h8l_A Protein disulfide-isome 97.6 0.00023 7.9E-09 69.0 10.2 107 46-176 6-114 (252)
267 3keb_A Probable thiol peroxida 97.6 7E-05 2.4E-09 71.7 6.2 106 48-174 33-175 (224)
268 3us3_A Calsequestrin-1; calciu 97.5 0.00024 8.1E-09 73.0 9.9 102 46-176 125-228 (367)
269 3ic4_A Glutaredoxin (GRX-1); s 97.5 3.6E-05 1.2E-09 62.4 2.6 73 69-171 14-91 (92)
270 2ec4_A FAS-associated factor 1 97.5 0.00066 2.3E-08 62.6 11.1 108 51-174 35-167 (178)
271 3sbc_A Peroxiredoxin TSA1; alp 97.4 0.00027 9.2E-09 67.2 7.9 98 60-172 47-178 (216)
272 3ec3_A Protein disulfide-isome 97.4 0.00045 1.5E-08 66.9 9.7 108 45-176 5-116 (250)
273 3msz_A Glutaredoxin 1; alpha-b 97.4 0.00016 5.3E-09 57.8 5.1 56 68-134 5-67 (89)
274 2yan_A Glutaredoxin-3; oxidore 97.4 0.00018 6.2E-09 60.1 5.7 69 54-141 8-83 (105)
275 3nzn_A Glutaredoxin; structura 97.3 0.00019 6.7E-09 59.6 5.0 74 68-170 23-101 (103)
276 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00012 4.2E-09 61.8 3.0 68 55-141 11-84 (113)
277 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00039 1.3E-08 54.6 5.3 53 69-134 3-57 (82)
278 4eo3_A Bacterioferritin comigr 97.2 0.00043 1.5E-08 70.0 6.7 109 47-177 8-141 (322)
279 3l9s_A Thiol:disulfide interch 97.1 0.00071 2.4E-08 62.9 6.7 30 66-95 22-54 (191)
280 3tue_A Tryparedoxin peroxidase 97.1 0.00098 3.3E-08 63.5 7.3 98 60-172 51-182 (219)
281 2lqo_A Putative glutaredoxin R 97.0 0.0012 4.2E-08 53.9 6.7 76 69-175 6-84 (92)
282 3gha_A Disulfide bond formatio 97.0 0.0033 1.1E-07 58.9 10.5 44 63-111 27-71 (202)
283 3ctg_A Glutaredoxin-2; reduced 97.0 0.0003 1E-08 61.3 2.9 68 53-134 27-100 (129)
284 2khp_A Glutaredoxin; thioredox 97.0 0.00062 2.1E-08 54.9 4.6 53 69-134 8-62 (92)
285 3h8q_A Thioredoxin reductase 3 97.0 0.00092 3.2E-08 56.7 5.5 69 54-141 8-81 (114)
286 3qmx_A Glutaredoxin A, glutare 96.9 0.00088 3E-08 55.4 4.8 54 68-134 17-73 (99)
287 3bj5_A Protein disulfide-isome 96.8 0.011 3.6E-07 52.6 11.7 114 45-178 13-130 (147)
288 3f4s_A Alpha-DSBA1, putative u 96.6 0.011 3.7E-07 56.4 10.9 32 64-95 38-70 (226)
289 2r2j_A Thioredoxin domain-cont 96.5 0.0088 3E-07 61.4 10.1 111 46-178 219-332 (382)
290 1wik_A Thioredoxin-like protei 96.5 0.004 1.4E-07 52.2 6.1 64 53-133 5-75 (109)
291 4f82_A Thioredoxin reductase; 96.3 0.0072 2.5E-07 55.5 7.1 69 55-131 40-112 (176)
292 3feu_A Putative lipoprotein; a 96.2 0.0021 7.3E-08 59.3 3.0 29 66-94 23-51 (185)
293 3bci_A Disulfide bond protein 95.7 0.034 1.2E-06 50.7 8.8 31 65-95 11-42 (186)
294 3l4n_A Monothiol glutaredoxin- 95.1 0.017 5.7E-07 50.0 4.2 69 54-134 5-76 (127)
295 2h8l_A Protein disulfide-isome 95.1 0.063 2.1E-06 51.6 8.7 110 46-178 114-233 (252)
296 2axo_A Hypothetical protein AT 94.3 0.16 5.5E-06 49.6 9.3 81 67-174 44-142 (270)
297 3q6o_A Sulfhydryl oxidase 1; p 94.1 0.24 8.1E-06 47.0 10.1 76 47-137 139-214 (244)
298 3ed3_A Protein disulfide-isome 93.3 0.19 6.5E-06 49.7 8.0 104 45-175 142-267 (298)
299 3tdg_A DSBG, putative uncharac 93.2 0.13 4.5E-06 50.2 6.6 29 65-93 147-175 (273)
300 2wci_A Glutaredoxin-4; redox-a 92.7 0.056 1.9E-06 47.2 2.9 64 54-134 26-96 (135)
301 1aba_A Glutaredoxin; electron 92.6 0.063 2.1E-06 42.6 2.7 53 69-134 2-70 (87)
302 3t58_A Sulfhydryl oxidase 1; o 92.4 0.21 7.1E-06 53.5 7.4 77 46-137 138-214 (519)
303 3c7m_A Thiol:disulfide interch 92.2 0.14 4.9E-06 46.4 5.1 41 65-112 17-58 (195)
304 1xiy_A Peroxiredoxin, pfaop; a 92.2 0.29 1E-05 44.8 7.1 61 65-131 43-108 (182)
305 3zyw_A Glutaredoxin-3; metal b 92.0 0.12 4.3E-06 43.2 4.1 62 56-134 9-77 (111)
306 3gx8_A Monothiol glutaredoxin- 92.0 0.21 7.1E-06 42.5 5.5 66 55-134 8-80 (121)
307 1nm3_A Protein HI0572; hybrid, 91.7 0.17 5.7E-06 48.1 5.1 54 68-134 171-225 (241)
308 2ct6_A SH3 domain-binding glut 91.1 0.33 1.1E-05 40.5 5.7 53 69-134 10-78 (111)
309 3ec3_A Protein disulfide-isome 91.0 1.2 4.2E-05 42.4 10.5 107 46-178 116-231 (250)
310 3ipz_A Monothiol glutaredoxin- 90.6 0.21 7.1E-06 41.5 4.0 63 55-134 10-79 (109)
311 1t1v_A SH3BGRL3, SH3 domain-bi 89.4 0.22 7.4E-06 39.9 3.1 53 69-134 4-66 (93)
312 2wem_A Glutaredoxin-related pr 89.0 0.31 1.1E-05 41.3 3.9 63 55-134 12-82 (118)
313 2jwa_A Receptor tyrosine-prote 87.3 0.33 1.1E-05 33.6 2.3 28 483-510 16-44 (44)
314 2xhf_A Peroxiredoxin 5; oxidor 87.1 0.48 1.7E-05 42.9 4.1 57 65-127 42-101 (171)
315 3gn3_A Putative protein-disulf 83.3 1.5 5.2E-05 39.8 5.6 41 65-111 14-54 (182)
316 3gmf_A Protein-disulfide isome 81.3 2.4 8.3E-05 39.2 6.3 43 65-112 15-58 (205)
317 2jad_A Yellow fluorescent prot 81.2 1.1 3.6E-05 45.6 4.0 67 56-134 254-324 (362)
318 2in3_A Hypothetical protein; D 80.6 1.4 4.7E-05 40.6 4.4 47 116-175 164-210 (216)
319 1u6t_A SH3 domain-binding glut 75.5 3.8 0.00013 34.8 5.2 58 68-134 1-70 (121)
320 2x8g_A Thioredoxin glutathione 71.7 4.2 0.00014 43.8 5.7 64 54-134 9-77 (598)
321 2ks1_B Epidermal growth factor 71.6 2.4 8.1E-05 29.3 2.4 27 483-509 16-42 (44)
322 3kzq_A Putative uncharacterize 70.6 2.9 9.9E-05 38.3 3.6 46 117-175 158-203 (208)
323 2l2t_A Receptor tyrosine-prote 69.3 1.9 6.6E-05 29.8 1.5 21 487-507 19-39 (44)
324 3gmf_A Protein-disulfide isome 62.7 5.9 0.0002 36.5 4.0 41 117-175 156-197 (205)
325 3feu_A Putative lipoprotein; a 61.6 6 0.00021 35.6 3.8 44 116-174 140-183 (185)
326 2wul_A Glutaredoxin related pr 61.3 6.7 0.00023 33.0 3.7 66 53-134 10-82 (118)
327 3gn3_A Putative protein-disulf 56.4 7.9 0.00027 34.9 3.6 38 118-170 144-181 (182)
328 1t4y_A Adaptive-response senso 55.3 85 0.0029 25.7 9.2 84 68-172 13-96 (105)
329 2imf_A HCCA isomerase, 2-hydro 54.1 9.4 0.00032 34.6 3.8 41 117-175 156-196 (203)
330 2kw0_A CCMH protein; oxidoredu 45.3 12 0.0004 30.0 2.5 18 432-449 57-74 (90)
331 2hl7_A Cytochrome C-type bioge 45.1 12 0.00041 29.6 2.4 17 432-448 60-76 (84)
332 1rw1_A Conserved hypothetical 45.0 15 0.00051 30.3 3.2 21 69-89 2-22 (114)
333 1z3e_A Regulatory protein SPX; 43.6 16 0.00054 31.0 3.3 21 69-89 3-23 (132)
334 2l9u_A Receptor tyrosine-prote 43.5 16 0.00053 23.6 2.3 24 479-506 11-34 (40)
335 3gl5_A Putative DSBA oxidoredu 43.5 21 0.0007 33.6 4.4 43 117-176 172-214 (239)
336 3c7m_A Thiol:disulfide interch 42.9 8.3 0.00028 34.3 1.4 43 117-174 151-193 (195)
337 2kok_A Arsenate reductase; bru 40.5 19 0.00065 29.9 3.2 21 69-89 7-27 (120)
338 3l78_A Regulatory protein SPX; 35.2 26 0.00088 29.2 3.2 21 69-89 2-22 (120)
339 3fz5_A Possible 2-hydroxychrom 35.0 28 0.00094 31.5 3.7 38 117-172 162-199 (202)
340 2lvu_A Zinc finger and BTB dom 36.4 11 0.00037 21.0 0.0 13 347-359 3-15 (26)
341 2knc_B Integrin beta-3; transm 29.5 50 0.0017 25.6 3.7 8 506-513 39-46 (79)
342 3fz4_A Putative arsenate reduc 29.1 38 0.0013 28.2 3.2 21 69-89 5-25 (120)
343 2g2q_A Glutaredoxin-2; thiored 28.8 32 0.0011 28.8 2.6 36 66-112 2-37 (124)
344 1un2_A DSBA, thiol-disulfide i 28.6 33 0.0011 31.1 3.0 19 116-134 38-56 (197)
345 3gkx_A Putative ARSC family re 24.9 41 0.0014 28.0 2.7 21 69-89 6-26 (120)
346 2in3_A Hypothetical protein; D 24.6 66 0.0022 28.8 4.4 27 67-93 8-34 (216)
347 3kzq_A Putative uncharacterize 24.3 83 0.0028 28.2 5.0 28 68-95 4-31 (208)
348 2k9y_A Ephrin type-A receptor 24.2 13 0.00043 24.9 -0.6 18 475-492 10-27 (41)
349 3irb_A Uncharacterized protein 23.3 13 0.00043 32.5 -0.9 17 404-420 55-71 (145)
350 1zza_A Stannin, AG8_1; helix, 23.0 48 0.0016 25.1 2.4 28 468-500 5-32 (90)
351 2rdd_B UPF0092 membrane protei 22.6 82 0.0028 20.5 3.3 15 502-516 21-35 (37)
352 2lvt_A Zinc finger and BTB dom 28.3 18 0.00062 20.5 0.0 13 347-359 3-15 (29)
353 3j1r_A Archaeal adhesion filam 21.7 1E+02 0.0036 18.4 3.1 23 480-502 2-24 (26)
354 2lvr_A Zinc finger and BTB dom 26.6 20 0.0007 20.3 0.0 13 347-359 4-16 (30)
355 1r4w_A Glutathione S-transfera 20.5 71 0.0024 29.2 3.7 40 115-170 169-210 (226)
356 1s3c_A Arsenate reductase; ARS 20.3 51 0.0017 28.3 2.4 21 69-89 4-24 (141)
No 1
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=100.00 E-value=5e-77 Score=630.86 Aligned_cols=381 Identities=26% Similarity=0.425 Sum_probs=279.9
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCC-CCCCeEEEEEeeccccccHHHHH
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNA-AHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~-~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
....|+.|+.++|++.+...+++++||+|||+||++|+.+.|.|+++++.+.+... ...+.+.|+.|||+ ++.++|+
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~ 98 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCR 98 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHH
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHH
Confidence 45679999999999988766567899999999999999999999999999863210 00025999999994 6899999
Q ss_pred hCCCCcCceEEEecCCcccCC-CCCCCccchhhhhccccCCHHHHHHHH----HHhc-----------ccCcCCCccccc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAG-SWEPNQEKKEIRALEDWQTADGLLTWI----NKQT-----------SRSYGLDDEKFE 186 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~-~~~~~~~~~~v~~~~G~~~~~~L~~~i----~~~l-----------~~~~~l~~~~~~ 186 (521)
+|+|+++||+++|.+|..... ..........+..+....+.++|...+ ++++ +..+.|++++.+
T Consensus 99 ~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link~~~~~~~~~e~c~~~~~~l~~~k~e 178 (470)
T 3qcp_A 99 KYDINFVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNKHMVVDDSLKERCIDMHFKLYTSKEE 178 (470)
T ss_dssp HTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhhccccCCccccchhhceecccccchh
Confidence 999999999999965532110 000000111112223334555554443 4444 333445555544
Q ss_pred cc--cCCCCCCCc----cchhHhHhHhhhhhhhHHHH-HHhhcccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhh
Q 009987 187 NE--QLPSNISDP----GQIARAVYDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNF 259 (521)
Q Consensus 187 ~~--~~~~~~~~~----~~~~~~~~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P~~~~r~~~~~lL~~l 259 (521)
++ .+.. +.+. +.......|+|.|+.+.|+. +..+++++|+++.||++|+.+|+++||++. ...+|..+
T Consensus 179 ~~~~~~~~-~~~~~~~~~~s~~y~~Dle~al~~~L~~ev~~~~~~~g~~l~al~~fl~~l~~~~P~~~----~~~~~~~l 253 (470)
T 3qcp_A 179 LVKRSVSS-TDESGRFVETTELYATDIAGAFFSAMHYDVSLVGTEPRERLTALEDFVLLVKDSLPSIG----ADGVVSAL 253 (470)
T ss_dssp HHHTTC--------CCCCCCSCCHHHHHHHHHHHHHTHHHHHCSCSHHHHHHHHHHHHHHHHHSTTSS----HHHHHHHH
T ss_pred hhhhhccc-ccccccccchhhehHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCCCcc----HHHHHHHH
Confidence 32 1111 1111 11111235999999888885 456788999999999999999999999852 12345555
Q ss_pred hhcCCCCccch-hhHHHhhccCCCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHHHHHhhcCCCCCCHHHHH
Q 009987 260 DDFSPSHMQSA-DKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDGESQFTFT 337 (521)
Q Consensus 260 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lfH~ltv~~~~~~~~~~~~ 337 (521)
..++....+.. .|... +.+..+++..+|++ +|++|+||+|++||||||||+|||+|||++|+ .+.++.
T Consensus 254 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~w~~C~gs~~~~rg~~CslW~l~Htlt~~~~~--~~~~~~ 323 (470)
T 3qcp_A 254 ESITAERPFTVASWQDA--------VVKSGIPFDGSPRNVRWRTCRGSSPQYRGFPCGMWLLLHALTVNTPA--DRNVLE 323 (470)
T ss_dssp HTCCSSSCCCHHHHHHH--------HHHTCCCCSEETTEECCSTTCCSSTTSSSHHHHHHHHHHHHHHHCCT--TCCHHH
T ss_pred HHHhhcCCCCHHHHHHH--------HHhccCCcCCCCCCCcccccCCCCCccCCcCchHHHHHHHHHhhCCC--ChHHHH
Confidence 54333333321 12221 11224555556776 89999999999999999999999999999998 477999
Q ss_pred HHHHHHHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhccccccccCCCCCCCCCCCCCCCCCChhhh
Q 009987 338 AVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCY 417 (521)
Q Consensus 338 ~~~~~v~~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~~pk~~~P~~~~Cp~C~ 417 (521)
+|++||++||||++|++||++|+ +++++++++|||++||+||+||+|++ .||||+|||+|||++++||+||
T Consensus 324 ~~~~~~~~ffpC~~Ca~hF~~~~------~~s~~~~~lWlw~~HN~VN~rL~~~~---~~~dp~fpk~~~P~~~~C~~C~ 394 (470)
T 3qcp_A 324 VIQNYIRYFFSCKECRDHFIQFN------FSPNEDPVLQLWRAHNNVNARLANVK---DGADPLVPKRQFPTLEACTECY 394 (470)
T ss_dssp HHHHHHHHHCSCHHHHHHHTTCC------CCSSSCHHHHHHHHHHHHHHHHTTCC---TTSCTTSCCCCSSCTTTCSSSS
T ss_pred HHHHHHHHccCcHHHHHHHHHHh------ccCHHHHHHHHHHHhCHHHHhcCCCC---CCCCCCCCccCCCCchhChhhh
Confidence 99999999999999999999986 67899999999999999999999963 7999999999999999999999
Q ss_pred ccCCCCCCcccCCCCChHHHHHHHHHHhCCC--ccccccccccc
Q 009987 418 RSHHHGDMKFRQIDWDQDEVFKFLTNYYGNT--LVSLYKDREFL 459 (521)
Q Consensus 418 ~~~~~~~~~~~~~~w~e~~V~~fL~~~Y~~~--~~s~~~~~~~~ 459 (521)
... +.|||++||+||++||+.+ +++.+++.+.+
T Consensus 395 ~~~---------~~w~~~~v~~~l~~~y~~~~~~~~~~~~~~~~ 429 (470)
T 3qcp_A 395 DGA---------GNFIEAHVTGFLKQRYLWDPKAVGLMESNDDL 429 (470)
T ss_dssp CSS---------SSCCTTHHHHHHHHHTCCCHHHHSSCCCGGGG
T ss_pred cCC---------CCCCHHHHHHHHHHHhCCCcchhhhhcccCCc
Confidence 742 4799999999999999965 67788877764
No 2
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=100.00 E-value=1e-75 Score=634.89 Aligned_cols=375 Identities=23% Similarity=0.455 Sum_probs=288.1
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.+.+.|.++++++|+..+.+. +++++|+|||+|||+|++++|.|+++++++.+++ ..+.|++|||+.+++.++|+
T Consensus 9 ~~~~~V~~Lt~~~f~~~v~~~-~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~----~~v~~~~VD~d~d~~~~l~~ 83 (519)
T 3t58_A 9 SSSDPLTLLDADSVRPTVLGS-SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWR----PALNLAVLDCAEETNSAVCR 83 (519)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGT----TTEEEEEEETTSGGGHHHHH
T ss_pred CCCCCcEECChHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcC----CcEEEEEEECCccccHHHHH
Confidence 456679999999999988664 4789999999999999999999999999997532 36999999998778999999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCcC-----------CCc---------
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYG-----------LDD--------- 182 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~~-----------l~~--------- 182 (521)
+|+|+++||+++|.+|+..+ ..+..+.|+++.+.|.++|.+.+..... ++.
T Consensus 84 ~~~V~~~PTl~~f~~g~~~G---------~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~ 154 (519)
T 3t58_A 84 EFNIAGFPTVRFFQAFTKNG---------SGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTR 154 (519)
T ss_dssp HTTCCSBSEEEEECTTCCSC---------CCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGS
T ss_pred HcCCcccCEEEEEcCcccCC---------CceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhcc
Confidence 99999999999998764321 2233456778888888888877653221 000
Q ss_pred --ccc-----c--------------------------c-----------ccCCC-------------C--CCC-------
Q 009987 183 --EKF-----E--------------------------N-----------EQLPS-------------N--ISD------- 196 (521)
Q Consensus 183 --~~~-----~--------------------------~-----------~~~~~-------------~--~~~------- 196 (521)
.++ + + ...|. + ...
T Consensus 155 ~~~~~vallF~~~~s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~ 234 (519)
T 3t58_A 155 NKADYLALVFEREDSYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSY 234 (519)
T ss_dssp CCCSEEEEEEECTTCCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHH
T ss_pred CCCCeEEEEecCCchHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHH
Confidence 000 0 0 00000 0 000
Q ss_pred -----------------c---cch---h------HhH--hHhhhhhhhHHHH-HHhhcccchhhHHHHHHHHHHHHHhcC
Q 009987 197 -----------------P---GQI---A------RAV--YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHP 244 (521)
Q Consensus 197 -----------------~---~~~---~------~~~--~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P 244 (521)
+ ..+ + ..+ .|||+|+.++|+. +..+++|+|+++.||++|+.+++++||
T Consensus 235 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~Dle~al~~~l~~ev~~~~~~~g~~l~al~~~~~~l~~~~P 314 (519)
T 3t58_A 235 LRGLPGLTRDAPPTTATPVTADKIAPTVWKFADRSKIYMADLESALHYILRVEVGKFSVLEGQRLVALKKFVAVLAKYFP 314 (519)
T ss_dssp HTTSTTCCCCCCC----------CCCCHHHHSCTTCEEHHHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCC
T ss_pred HHHccCCCCCCCCCCCCCCccccccchhhhhccccceeHHHHHHHHHHHHHHHhcccccccCchHHHHHHHHHHHHHHCC
Confidence 0 000 0 012 3999988888874 456789999999999999999999999
Q ss_pred CccccchhHHHHHhhhhcCCC---CccchhhHHHhhccCCCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHH
Q 009987 245 SRRCRKGSAKVLVNFDDFSPS---HMQSADKQEVVNNNGKGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLL 320 (521)
Q Consensus 245 ~~~~r~~~~~lL~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lf 320 (521)
++. ....+|..+.+++.. ..... +++... +++. ..|.++|.+ +|++|+||+|++||||||||+||
T Consensus 315 ~~~---~~~~~l~~l~~~l~~~~~~~~~~--~~~~~~-----~~~~-~~~~~~~~~~~w~~C~gs~~~~rg~~C~lW~l~ 383 (519)
T 3t58_A 315 GQP---LVQNFLHSINDWLQKQQKKRIPY--SFFKAA-----LDSR-KEDAVLTEKVNWVGCQGSEPHFRGFPCSLWVLF 383 (519)
T ss_dssp CCH---HHHHHHHHHHHHHHHCCCSEEEH--HHHHHH-----HHHT-THHHHTCSSCCCSTTBCSSTTSBSHHHHHHHHH
T ss_pred Cch---HHHHHHHHHHHHHHhcccccCCH--HHHHHH-----HHhc-ccCCcCCCCCCcccCCCCCcccCCcCcHHHHHH
Confidence 964 344555555443321 22211 111111 1111 125556766 99999999999999999999999
Q ss_pred HHHhhcCCCC---------CCHHHHHHHHHHHHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 009987 321 HSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (521)
Q Consensus 321 H~ltv~~~~~---------~~~~~~~~~~~~v~~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (521)
|+|||++|+. +++.++.+|++||++||||++|++||++|+.+.+++++|++++++|||++||+||+||+|+
T Consensus 384 Htltv~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ff~C~~Ca~hF~~~~~~~~~~v~s~~~~~~Wlw~~HN~VN~rL~~~ 463 (519)
T 3t58_A 384 HFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFFFGCRDSADHFEQMAAASMHQVRSPSNAILWLWTSHNRVNARLSGA 463 (519)
T ss_dssp HHHHHHHHHHHHTSTTSCCCSCHHHHHHHHHHHHHCSBHHHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHccCccCCccccccccchHHHHHHHHHHHHHCCCchHHHHHHHHHHhhCCCcCCCHHHHHHHHHHhhCHHHhhcCCC
Confidence 9999999753 4568999999999999999999999999999989999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCChhhhccCCCCCCcccCCCCChHHHHHHHHHHhCCCccc
Q 009987 392 EASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQIDWDQDEVFKFLTNYYGNTLVS 451 (521)
Q Consensus 392 ~~~~~~~dp~~pk~~~P~~~~Cp~C~~~~~~~~~~~~~~~w~e~~V~~fL~~~Y~~~~~s 451 (521)
++|||+|||+|||++++||.||.+++++ .++||+++||+||++|||+++++
T Consensus 464 ----~~~dp~f~k~q~P~~~~C~~C~~~~~~~-----~~~w~~~~v~~fl~~~y~~~n~~ 514 (519)
T 3t58_A 464 ----LSEDPHFPKVQWPPRELCSACHNELNGQ-----VPLWDLGATLNFLKAHFSPANIV 514 (519)
T ss_dssp ----TTCCTTSCCCSSSCTTTCSTTBCSCTTS-----CCCBCHHHHHHHHHHHTSGGGEE
T ss_pred ----CCCCCCCCccCCCCchhChhhhhcccCC-----cccCCHHHHHHHHHHHcCccccc
Confidence 8999999999999999999999876322 46899999999999999999875
No 3
>3llk_A Sulfhydryl oxidase 1; disulfide, flavin adenine dinucleotide, alternative splicing, FAD, flavoprotein, glycoprotein, GOLG apparatus, membrane; HET: FAD FLC; 2.00A {Homo sapiens} PDB: 3lli_A*
Probab=100.00 E-value=3e-64 Score=490.68 Aligned_cols=226 Identities=29% Similarity=0.601 Sum_probs=185.1
Q ss_pred hHhhhhhhhHHHH-HHhhcccchhhHHHHHHHHHHHHHhcCCccccchhHHHHHhhhhcCC---CCccchhhHHHhhccC
Q 009987 205 YDVEEATTTAFDI-ILDHKMIKSETRASLIRFLQVLVAHHPSRRCRKGSAKVLVNFDDFSP---SHMQSADKQEVVNNNG 280 (521)
Q Consensus 205 ~Dle~a~~~a~~~-~l~~~~l~ge~l~aL~~Fl~vl~~~~P~~~~r~~~~~lL~~l~~~~~---~~~~~~~~~~~~~~~~ 280 (521)
.|+|+|+.+++.. +..+++|+|+++.||++|+++|+++||++. ...++|..+.+... ..+... +++.+
T Consensus 17 aDLe~al~~~L~~Ev~~~~~i~g~~l~AL~~fl~vl~~~~P~~~---~~~~~l~~l~~~l~~~~~~~i~~--~~~~~--- 88 (261)
T 3llk_A 17 ADLESALHYILRIEVGRFPVLEGQRLVALKKFVAVLAKYFPGRP---LVQNFLHSVNEWLKRQKRNKIPY--SFFKT--- 88 (261)
T ss_dssp HHHHHHHHHHHHTTGGGCSEEEHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHCCSSEEEH--HHHHH---
T ss_pred HHHHHHHHHHHHHHhcCcCcCCCchhHHHHHHHHHHHHHCCCcH---HHHHHHHHHHHHHHhCcccCCCH--HHHHH---
Confidence 4999998888874 456789999999999999999999999863 34455555544322 122211 11111
Q ss_pred CCCCCCcCccCCCCCCC-CcccccCCCCCcCcccccHHHHHHHHhhcCCCC---------CCHHHHHHHHHHHHhccCCh
Q 009987 281 KGGLGNFPICGKEVPRG-YWIFCRGSKNDTRGFSCGLWVLLHSLSVRIDDG---------ESQFTFTAVCDFIHNFFVCE 350 (521)
Q Consensus 281 ~~~~~~~~~~g~~~p~~-~w~~C~gS~~~~Rgy~CglW~lfH~ltv~~~~~---------~~~~~~~~~~~~v~~Ff~C~ 350 (521)
.+++. ..|..++.+ +|++|+||+|++||||||||+|||+|||++++. ++++++++|++||++||||+
T Consensus 89 --~l~~~-~~~~~~~~~~~WvgC~GS~p~~RGy~CgLW~LFH~LTV~a~~~~~~~~~~~~~~~~vl~ai~~fv~~FypC~ 165 (261)
T 3llk_A 89 --ALDDR-KEGAVLAKKVNWIGCQGSEPHFRGFPCSLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYFFGCR 165 (261)
T ss_dssp --HHHHT-THHHHTCSSCCCSTTCCSSTTSSSHHHHHHHHHHHHHHHHHCC---------CGGGHHHHHHHHHHHHCSCH
T ss_pred --HHHhh-hccCccCCCCcccccCCCCCccCCcCcHHHHHHHHHHhhhhcccccccccccCHHHHHHHHHHHHHHcCCcH
Confidence 11111 123344554 999999999999999999999999999998654 35689999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhccccccccCCCCCCCCCCCCCCCCCChhhhccCCCCCCcccCC
Q 009987 351 ECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKLEASLKTGDPKFPKIIWPPKQLCSSCYRSHHHGDMKFRQI 430 (521)
Q Consensus 351 ~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~~~~~~~~dp~~pk~~~P~~~~Cp~C~~~~~~~~~~~~~~ 430 (521)
+|++||++|+.+.++++++++++++|||++||+||+||+|+ +||||+|||+||||+++||+||.++++ .+
T Consensus 166 ~Ca~hF~~~~~~~~~~v~sr~~~~lWLw~~HN~VN~rLag~----~seDP~fpK~qwP~~~~Cp~C~~~~~~------~~ 235 (261)
T 3llk_A 166 DCASHFEQMAAASMHRVGSPNAAVLWLWSSHNRVNARLAGA----PSEDPQFPKVQWPPRELCSACHNERLD------VP 235 (261)
T ss_dssp HHHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHHTTC----TTSCTTSCCCSSSCTTTCSTTBCCCSS------SC
T ss_pred HHHHHHHHHHhhCCCccCCHHHHHHHHHHhcCHHhhhcCCC----CCCCCCCCccCCCCchhChHHHhccCC------CC
Confidence 99999999999888999999999999999999999999998 899999999999999999999987642 46
Q ss_pred CCChHHHHHHHHHHhCCCccc
Q 009987 431 DWDQDEVFKFLTNYYGNTLVS 451 (521)
Q Consensus 431 ~w~e~~V~~fL~~~Y~~~~~s 451 (521)
+|||++||+||++|||++++.
T Consensus 236 ~W~~~~Vl~fLk~~y~~~nl~ 256 (261)
T 3llk_A 236 VWDVEATLNFLKAHFSPSNII 256 (261)
T ss_dssp SBCHHHHHHHHHHHTSGGGEE
T ss_pred CCCHHHHHHHHHHHcCccccc
Confidence 899999999999999998753
No 4
>1jr8_A ERV2 protein, mitochondrial; FAD, sulfhydryl oxidase, helical bundle, CXXC, oxidoreductase; HET: FAD; 1.50A {Saccharomyces cerevisiae} SCOP: a.24.15.1 PDB: 1jra_A*
Probab=99.94 E-value=4.8e-27 Score=203.22 Aligned_cols=87 Identities=23% Similarity=0.378 Sum_probs=77.8
Q ss_pred cccccHHHHHHHHhhcCCCCCCHH---HHHHHHHHHHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhh
Q 009987 311 GFSCGLWVLLHSLSVRIDDGESQF---TFTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNER 387 (521)
Q Consensus 311 gy~CglW~lfH~ltv~~~~~~~~~---~~~~~~~~v~~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~r 387 (521)
.+-||+|+|||+|||++|+.|+.. ++..|.+++.+||||.+|++||.+|+.+.+++++|++++++|||++||.||+|
T Consensus 10 ~lG~s~W~llHtlaa~~p~~pt~~~~~~l~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~VN~r 89 (117)
T 1jr8_A 10 EVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNEY 89 (117)
T ss_dssp HHHHHHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456999999999999999998754 66677777778999999999999999999999999999999999999999999
Q ss_pred ccccccccCC
Q 009987 388 LMKLEASLKT 397 (521)
Q Consensus 388 l~~~~~~~~~ 397 (521)
|+|++++|..
T Consensus 90 L~kp~f~c~~ 99 (117)
T 1jr8_A 90 LKKDIYDCAT 99 (117)
T ss_dssp TTCCCCCCTT
T ss_pred hCCCCcCHHH
Confidence 9997766654
No 5
>2hj3_A Sulfhydryl oxidase ERV1P; four-helix bundle, flavin adenine dinucleotide, oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana}
Probab=99.93 E-value=3.1e-27 Score=206.60 Aligned_cols=105 Identities=22% Similarity=0.472 Sum_probs=81.9
Q ss_pred CcCcccccHHHHHHHHhhcCCCCCCHHH---HHHHHHHHHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhh
Q 009987 308 DTRGFSCGLWVLLHSLSVRIDDGESQFT---FTAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQV 384 (521)
Q Consensus 308 ~~Rgy~CglW~lfH~ltv~~~~~~~~~~---~~~~~~~v~~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~V 384 (521)
....+.||+|+|||+||+++|+.|+... +..+..++.+||||.+||+||.+|+.+.+++|+|++++++|||++||+|
T Consensus 9 ~~~~lG~slW~llHtlaa~yp~~pt~~~~~~~~~f~~~~~~fypC~~Ca~hF~~~~~~~p~~v~sr~~~~lWLw~~HN~V 88 (125)
T 2hj3_A 9 TKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTV 88 (125)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHH
T ss_pred CccccCcchhHHHHHHHhhCcCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 4457889999999999999999988664 4444556678999999999999999999999999999999999999999
Q ss_pred hhhccccccccCCCCCCCCCCCCCCCCCC
Q 009987 385 NERLMKLEASLKTGDPKFPKIIWPPKQLC 413 (521)
Q Consensus 385 N~rl~~~~~~~~~~dp~~pk~~~P~~~~C 413 (521)
|+||+|++++|..-+.++-.- |+....|
T Consensus 89 N~rL~Kp~f~c~~~~~rw~~g-~~d~~~c 116 (125)
T 2hj3_A 89 NRSLGKLVFPCERVDARWGKL-ECEQKSC 116 (125)
T ss_dssp HHHTTCCCCCTTSHHHHCC----------
T ss_pred HHhhCCCCCCHHHHHHHhccC-CCCCCCc
Confidence 999999776665544444333 4444444
No 6
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=99.91 E-value=4.7e-25 Score=190.17 Aligned_cols=77 Identities=14% Similarity=0.367 Sum_probs=73.3
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHHH---hccCChHHHHHHHHHHhcCC----CC-CCChhHHHHHHHHhhhhhhh
Q 009987 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVT----SP-FNKTRDFALWLWSTHNQVNE 386 (521)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~---~Ff~C~~C~~hf~~~~~~~~----~~-~~~~~~~~lWlw~~HN~VN~ 386 (521)
++|+|||+||+++|+.|+....++|++||. +||||.+|++||++++.+.+ ++ ++|++++++|||++||+||+
T Consensus 12 s~W~llHt~aa~~p~~pt~~~~~~~~~fi~~~~~~yPC~~Ca~hf~~~~~~~p~~~~~~~v~sr~~~~~Wlc~~HN~VN~ 91 (114)
T 3gwn_A 12 AGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNN 91 (114)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHTTSGGGCCCGGGGSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCcCCccccCCHHHHHHHHHHHHhHHHH
Confidence 689999999999999999999999999998 56999999999999999888 78 99999999999999999999
Q ss_pred hcccc
Q 009987 387 RLMKL 391 (521)
Q Consensus 387 rl~~~ 391 (521)
||+|+
T Consensus 92 rLgKp 96 (114)
T 3gwn_A 92 KLEVD 96 (114)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 99995
No 7
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=99.90 E-value=2.2e-24 Score=183.39 Aligned_cols=82 Identities=27% Similarity=0.474 Sum_probs=71.1
Q ss_pred cHHHHHHHHhhcCCCCCCHHHH----HHHHHHHHhccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhccc
Q 009987 315 GLWVLLHSLSVRIDDGESQFTF----TAVCDFIHNFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMK 390 (521)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~----~~~~~~v~~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~ 390 (521)
++|+|||+||+++|+.|+.... +.|+.|++ +|||.+|++||.+++.+.++++.+++++++|||++||+||+||+|
T Consensus 10 a~W~llHt~aa~yP~~Pt~~~~~~~~~~i~~f~~-~yPC~~Ca~hf~~~~~~~p~~~~s~~~~~lWlc~~HN~VN~rLgK 88 (106)
T 3gwl_A 10 KYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIE-SLPCTRCQHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNK 88 (106)
T ss_dssp HHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHH-HCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhCCCCccChHHHHHHHHHHHhHHHHhhCC
Confidence 5799999999999999998554 44555553 499999999999999999888889999999999999999999999
Q ss_pred cccccCC
Q 009987 391 LEASLKT 397 (521)
Q Consensus 391 ~~~~~~~ 397 (521)
++++|..
T Consensus 89 p~fdc~~ 95 (106)
T 3gwl_A 89 KIISWSE 95 (106)
T ss_dssp CCCCHHH
T ss_pred CCCCHHH
Confidence 8776643
No 8
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-22 Score=173.38 Aligned_cols=78 Identities=21% Similarity=0.479 Sum_probs=73.3
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHHH---hccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 009987 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIH---NFFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (521)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~---~Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (521)
+.|++||+||+++|+.|+......+++||. +||||++||+||.+++.+.++.++|++++++|||++||.||+||+|+
T Consensus 10 ~~W~~lHtia~~yP~~pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~p~~~~sr~~l~~Wl~~~HN~VN~rLgKp 89 (106)
T 4e0h_A 10 SSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKP 89 (106)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 369999999999999999999999999998 57999999999999999999999999999999999999999999984
Q ss_pred c
Q 009987 392 E 392 (521)
Q Consensus 392 ~ 392 (521)
+
T Consensus 90 ~ 90 (106)
T 4e0h_A 90 K 90 (106)
T ss_dssp C
T ss_pred C
Confidence 3
No 9
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=99.86 E-value=7.9e-22 Score=172.75 Aligned_cols=82 Identities=24% Similarity=0.383 Sum_probs=75.8
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHHHh---ccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhcccc
Q 009987 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERLMKL 391 (521)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl~~~ 391 (521)
+.|+|||+||++||+.|+......|++||.. ||||.+|++||.+++.+.++.++|++++++|||.+||.||+||+|+
T Consensus 26 atW~~LHtia~~yP~~Pt~~~k~~~~~fi~~l~~~lPC~~C~~hf~~~l~~~pp~l~SR~~l~~Wl~~~HN~VN~rLgKp 105 (126)
T 3u5s_A 26 HSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPXEEXAEDLRKRLARNHPDTRTRAAFTQWLXHLHNEVNRKLGKP 105 (126)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 3599999999999999999999999999995 6999999999999999999999999999999999999999999996
Q ss_pred ccccC
Q 009987 392 EASLK 396 (521)
Q Consensus 392 ~~~~~ 396 (521)
++++.
T Consensus 106 ~fd~~ 110 (126)
T 3u5s_A 106 DFDXS 110 (126)
T ss_dssp CCCGG
T ss_pred CCCHH
Confidence 55443
No 10
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.83 E-value=2.7e-20 Score=158.79 Aligned_cols=98 Identities=19% Similarity=0.488 Sum_probs=86.1
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCce
Q 009987 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (521)
Q Consensus 52 ~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPT 131 (521)
+.++|++.|.+..+++++|+|||+|||||+.+.|.++++++.+. .+.++.||+ +++++++++|+|+++||
T Consensus 7 ~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--d~~~~l~~~~~V~~~PT 76 (105)
T 3zzx_A 7 DQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS--------DVVFLKVDV--DECEDIAQDNQIACMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC--------CeEEEEEec--ccCHHHHHHcCCCeecE
Confidence 45899999988777899999999999999999999999999874 388999998 57899999999999999
Q ss_pred EEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHh
Q 009987 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (521)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~ 173 (521)
+++|++|+. +.++.| .+.++|.++|+++
T Consensus 77 ~~~~~~G~~-------------v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 77 FLFMKNGQK-------------LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEEEETTEE-------------EEEEES-CCHHHHHHHHHHH
T ss_pred EEEEECCEE-------------EEEEeC-cCHHHHHHHHHhc
Confidence 999988743 355677 6899999999875
No 11
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=1.4e-19 Score=158.62 Aligned_cols=114 Identities=11% Similarity=0.200 Sum_probs=95.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.++.|..|++++|++.+.+. ++++||+|||+||++|+.+.|.|+++++.+.... ..+.+.++.||| +++.++|++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~--~~~~v~~~~vd~--~~~~~l~~~ 87 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDP-EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKR--NHLTFVAARIDG--EKYPDVIER 87 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTST--TTTTEEEEEEET--TTCHHHHHH
T ss_pred CCCceEECChhhHHHHHhCC-CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcc--cCCCeEEEEEEc--cccHhHHHh
Confidence 45679999999999998753 4789999999999999999999999999875321 125699999999 468999999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHh
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~ 173 (521)
|+|+++||+++|++|... ....|.|.++.+.|.+||.+.
T Consensus 88 ~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDKQ-----------EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSCSS-----------SCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCCCC-----------CceEecCCccHHHHHHHHHhc
Confidence 999999999999876322 114578999999999999874
No 12
>4e0i_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; flavin-linked sulfhydryl oxidase, MIA40, oxidation, mitochon intermembrane space; HET: FAD; 3.00A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.7e-20 Score=173.41 Aligned_cols=83 Identities=18% Similarity=0.382 Sum_probs=76.2
Q ss_pred ccccHHHHHHHHhhcCCCCCCHHHHHHHHHHHHh---ccCChHHHHHHHHHHhcCCCCCCChhHHHHHHHHhhhhhhhhc
Q 009987 312 FSCGLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVTSPFNKTRDFALWLWSTHNQVNERL 388 (521)
Q Consensus 312 y~CglW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---Ff~C~~C~~hf~~~~~~~~~~~~~~~~~~lWlw~~HN~VN~rl 388 (521)
.=-+.|+|||+|+++||+.|+......+++||.. ||||.+|++||.+++.+.++.++|++++++|||.+||.||+||
T Consensus 90 lGp~~W~~LHTiA~~YP~~Pt~~~k~~~~~Fi~~l~~~lPC~~C~~hf~~~lk~~pp~l~SR~~l~~Wl~~~HN~VN~rL 169 (189)
T 4e0i_A 90 LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKL 169 (189)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHCccccCCHHHHHHHHHHHHHHHHHHc
Confidence 3456799999999999999999999999999995 6999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 009987 389 MKLEAS 394 (521)
Q Consensus 389 ~~~~~~ 394 (521)
+|.+++
T Consensus 170 gKp~fd 175 (189)
T 4e0i_A 170 RKPKFD 175 (189)
T ss_dssp TCCCCC
T ss_pred CCCCCC
Confidence 995444
No 13
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.80 E-value=6.2e-19 Score=163.90 Aligned_cols=132 Identities=14% Similarity=0.255 Sum_probs=101.6
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec-------CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA-------NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN 117 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA-------~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~ 117 (521)
.+.++.||+++|++.+...++.++||+||| +|||+|+.+.|+|+++|+++....+ .+.+.|++||+ |++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~--~~~v~f~kvD~--d~~ 92 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAP--QSLNLFFTVDV--NEV 92 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCT--TCCEEEEEEET--TTC
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccC--CCCEEEEEEEC--ccC
Confidence 456999999999998876667789999999 4999999999999999999852110 03699999998 579
Q ss_pred HHHHHhCCCCcCceEEEecCCcccC---CCCCCCccchhhhhccc-cCCHHHHHHHHHHhcccCcCCC
Q 009987 118 TNLCDKFSVGHYPMLLWGSPSKFVA---GSWEPNQEKKEIRALED-WQTADGLLTWINKQTSRSYGLD 181 (521)
Q Consensus 118 ~~l~~~f~I~~yPTl~~f~~g~~~~---~~~~~~~~~~~v~~~~G-~~~~~~L~~~i~~~l~~~~~l~ 181 (521)
++++++|||+++||+++|++|.... ..+.. ..........| +++++.|.+||.++++..+.+.
T Consensus 93 ~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~-~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~ 159 (178)
T 3ga4_A 93 PQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKT-SPFYQYSLVPENAENTLQFGDFLAKILNISITVP 159 (178)
T ss_dssp HHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTT-SCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCCCcccccccc-CCcceeecccCCCcCHHHHHHHHHHhcCCCcccc
Confidence 9999999999999999999885432 01111 00111111135 8999999999999999776654
No 14
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.76 E-value=4e-18 Score=144.65 Aligned_cols=107 Identities=17% Similarity=0.273 Sum_probs=93.2
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
..+..++.++|++.+.+. +++++|.|||+||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+
T Consensus 4 ~~v~~l~~~~~~~~~~~~-~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 73 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDE-GKACLVMFSRKNCHVCQKVTPVLEELRLNYE-------ESFGFYYVDV--EEEKTLFQRFS 73 (111)
T ss_dssp CCSEECCHHHHHHHHTTS-CCCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHTT
T ss_pred CcceecCHHHHHHHHHhc-CCEEEEEEeCCCChhHHHHHHHHHHHHHHcC-------CceEEEEEEC--CcChhHHHhcC
Confidence 458899999999999543 3789999999999999999999999999985 3589999998 46899999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+++||+++|++|+. +..+.|..+.+.|.++|++.++
T Consensus 74 v~~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 74 LKGVPQILYFKDGEY-------------KGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp CCSSCEEEEEETTEE-------------EEEEESSCCHHHHHHHHHHHHH
T ss_pred CCcCCEEEEEECCEE-------------EEEEeccCCHHHHHHHHHHHhc
Confidence 999999999987743 3567899999999999998764
No 15
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.75 E-value=5.2e-18 Score=143.79 Aligned_cols=107 Identities=25% Similarity=0.496 Sum_probs=92.0
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.+..++.++|++.+. +++++|+||++||++|+.+.|.++++++.+.... +.+.++.||+ +++.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~~~~~~vd~--~~~~~l~~~~ 74 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA---EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGL----AGVKIAEVDC--TAERNICSKY 74 (111)
T ss_dssp -CCSEECCTTTHHHHHH---SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-----CCEEEEEEET--TTCHHHHHHT
T ss_pred CCcceEcChhhHHHHhc---CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccC----CceEEEEEec--cccHhHHHhc
Confidence 34689999999999998 3689999999999999999999999999875432 3599999999 4688999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHh
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~ 173 (521)
+|+++||+++|++|+. +..+.|..+.+.|.+||.++
T Consensus 75 ~v~~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 75 SVRGYPTLLLFRGGKK-------------VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEECSCCSHHHHHHHHHHH
T ss_pred CCCcccEEEEEeCCcE-------------EEeccCCcCHHHHHHHHHhc
Confidence 9999999999987743 35678999999999999875
No 16
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.75 E-value=3.4e-18 Score=151.85 Aligned_cols=106 Identities=15% Similarity=0.244 Sum_probs=93.0
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCC--hhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWC--PACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WC--g~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.....+|+++|++.+.+. ++++||+|||+|| |+|+.++|.++++++++. +.+.|++||. |++++++++
T Consensus 15 ~g~~~vt~~~F~~~v~~~-~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~-------~~v~~~KVdv--De~~~la~~ 84 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHS-GKIVVLFFRGDAVRFPEAADLAVVLPELINAFP-------GRLVAAEVAA--EAERGLMAR 84 (137)
T ss_dssp --CEEECTTTHHHHHHTS-SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST-------TTEEEEEECG--GGHHHHHHH
T ss_pred cCCcccCHhHHHHHHhcC-CCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHH
Confidence 346689999999998764 3589999999999 999999999999999986 5699999997 679999999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+|+++||+++|++|+. +.+..|..+.+.|.++|++++
T Consensus 85 ygV~siPTlilFkdG~~-------------v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 85 FGVAVCPSLAVVQPERT-------------LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HTCCSSSEEEEEECCEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred cCCccCCEEEEEECCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 99999999999999854 456789999999999998877
No 17
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.75 E-value=3.3e-18 Score=147.70 Aligned_cols=106 Identities=17% Similarity=0.292 Sum_probs=90.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.......+.++|++.+.+..+++++|+|||+||++|+.+.|.++++++.+. + +.|+.||+ +++.+++++|
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~-v~~~~vd~--d~~~~l~~~~ 80 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASEC 80 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT-------T-SEEEEEET--TTTHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHHHc
Confidence 445778889999999986556899999999999999999999999998874 3 89999998 5689999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+|+++||+++|++|+. +..+.|. +.+.|.++|++.+
T Consensus 81 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 81 EVKSMPTFQFFKKGQK-------------VGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp TCCSSSEEEEESSSSE-------------EEEEESC-CHHHHHHHHHHHC
T ss_pred CCccccEEEEEeCCeE-------------EEEEcCC-CHHHHHHHHHHhC
Confidence 9999999999987743 3457787 9999999998764
No 18
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.74 E-value=8.6e-18 Score=142.04 Aligned_cols=106 Identities=18% Similarity=0.399 Sum_probs=91.5
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+.++.++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 2 ~~v~~l~~~~f~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKYG 71 (108)
T ss_dssp TTEEECCTTTHHHHTTTC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEETT--TCTTHHHHTT
T ss_pred CcceecchhhHHHHHHhc-CCeEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcC
Confidence 458899999999877543 5789999999999999999999999999985 35999999984 5788999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 72 IRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred CcccCEEEEEeCCEE-------------EEEEecCCCHHHHHHHHHHhh
Confidence 999999999987743 345788899999999998875
No 19
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.74 E-value=5.4e-18 Score=145.10 Aligned_cols=104 Identities=18% Similarity=0.354 Sum_probs=91.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+++++.++|++.+ .+++++|.|||+||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+|+
T Consensus 3 v~~l~~~~~~~~~---~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~~--~~~~l~~~~~v~ 70 (112)
T 2voc_A 3 IVKATDQSFSAET---SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG-------DKLKIVKIDVD--ENQETAGKYGVM 70 (112)
T ss_dssp CEECCTTTHHHHH---SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT-------TTCEEEEEETT--TCCSHHHHTTCC
T ss_pred eEEecHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCcEEEEEECC--CCHHHHHHcCCC
Confidence 6789999999998 35889999999999999999999999999986 34899999984 578899999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
++||+++|++|+. +..+.|..+.++|.+|+.++++.
T Consensus 71 ~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 71 SIPTLLVLKDGEV-------------VETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp SBSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHTTSCS
T ss_pred cccEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHHHh
Confidence 9999999987743 35678999999999999988764
No 20
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.74 E-value=1.1e-17 Score=141.18 Aligned_cols=106 Identities=30% Similarity=0.539 Sum_probs=93.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.+..++.++|++.+.+ +++++|+||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|
T Consensus 3 ~~~v~~l~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~ 71 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRN--NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK-------GKAVFGRLNV--DENQKIADKY 71 (109)
T ss_dssp CCCCEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHHHT
T ss_pred CCeEEEecHHHHHHHHhc--CCeEEEEEECCCCHHHHhhhHHHHHHHHHhC-------CCceEEEEcc--ccCHHHHHhc
Confidence 356889999999999976 4889999999999999999999999999986 3589999998 5689999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+|+++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 ~i~~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 72 SVLNIPTTLIFVNGQL-------------VDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHC
T ss_pred CcccCCEEEEEcCCcE-------------EEeeeccCCHHHHHHHHHHHh
Confidence 9999999999987743 356789999999999998875
No 21
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.74 E-value=3.2e-18 Score=154.63 Aligned_cols=113 Identities=11% Similarity=0.085 Sum_probs=90.2
Q ss_pred ceecC-cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 48 AVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 48 v~~L~-~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
+..|+ .++|++.+.+..++++||+|||+|||||+.+.|.++++|+++. +.+.|++||. |++++++++|+|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~-------~~v~f~kVDV--De~~e~a~~y~V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIK-------NFCVIYLVDI--TEVPDFNTMYEL 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEET--TTCCTTTTTTTC
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHcc-------CCcEEEEEEC--CCCHHHHHHcCC
Confidence 55555 4899998865345899999999999999999999999999996 4589999998 578999999999
Q ss_pred CcCceEEEecCCccc--CCCCCCCccchhhhhccccCC-HHHHHHHHHHhcc
Q 009987 127 GHYPMLLWGSPSKFV--AGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~--~~~~~~~~~~~~v~~~~G~~~-~~~L~~~i~~~l~ 175 (521)
+++||+++|.+|+.. +-+. .....+.|... .++|+++|++.+.
T Consensus 94 ~siPT~~fFk~G~~v~vd~Gt------gd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 94 YDPVSVMFFYRNKHMMIDLGT------GNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp CSSEEEEEEETTEEEEEECSS------SCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEEEEecCC------CCcCeEEeecCCHHHHHHHHHHHHH
Confidence 999999999888653 1000 00124677776 8999999988763
No 22
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.74 E-value=9.5e-18 Score=140.96 Aligned_cols=103 Identities=20% Similarity=0.379 Sum_probs=90.5
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.+.+++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 4 ~v~~l~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 71 (106)
T 3die_A 4 AIVKVTDADFDSKV---ESGVQLVDFWATACGPCKMIAPVLEELAADYE-------GKADILKLDV--DENPSTAAKYEV 71 (106)
T ss_dssp CCEECCTTTHHHHS---CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTTC
T ss_pred ceEECCHHHHHHHh---cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCcEEEEEEC--CcCHHHHHhCCC
Confidence 58899999999999 34889999999999999999999999999986 3489999998 568999999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 72 ~~~Pt~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 72 MSIPTLIVFKDGQP-------------VDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp CSBSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHTTC
T ss_pred cccCEEEEEeCCeE-------------EEEEeCCCCHHHHHHHHHHhC
Confidence 99999999987743 356789999999999998753
No 23
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.1e-17 Score=148.39 Aligned_cols=113 Identities=24% Similarity=0.501 Sum_probs=96.9
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.+..++.++|+..+.+ ++++||+||++||++|+.+.|.|+++++.+.+.+ ..+.++.||| +++.+++++
T Consensus 15 ~~~~v~~l~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~----~~v~~~~vd~--~~~~~~~~~ 86 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFVAD--KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDND----PPIAVAKIDA--TSASMLASK 86 (140)
T ss_dssp EETTEEECCTTTHHHHHTT--CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSS----SCCEEEEECT--TTCHHHHHH
T ss_pred CCCCCEEcChHhHHHHHhc--CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CceEEEEEeC--cccHHHHHH
Confidence 3456999999999998865 4789999999999999999999999999987432 2489999998 467899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|+|+++||+++|++|+ +..+.|.++.++|.+||++.++...
T Consensus 87 ~~v~~~Pt~~~~~~G~--------------~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 87 FDVSGYPTIKILKKGQ--------------AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred CCCCccCeEEEEECCc--------------EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9999999999998764 2457899999999999999987544
No 24
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.74 E-value=8.4e-18 Score=169.66 Aligned_cols=130 Identities=22% Similarity=0.424 Sum_probs=103.4
Q ss_pred CccccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHH
Q 009987 41 KKVEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (521)
Q Consensus 41 ~p~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l 120 (521)
.+.....|++|+.++|++.+.+. ++++||+|||+||++|++++|.|+++++.+. +.+.++.|||+.+++.++
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~~~-~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~-------~~~~~~~v~~d~~~~~~l 83 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIHNT-NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD-------GVVQVAAVNCDLNKNKAL 83 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHTSS-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETTSTTTHHH
T ss_pred CCCCCCCeEEeCHHHHHHHHHhC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCcEEEEEEccCccCHHH
Confidence 44567789999999999999643 4789999999999999999999999999986 348899999976678999
Q ss_pred HHhCCCCcCceEEEecCCcccCCCCC--C--CccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 121 CDKFSVGHYPMLLWGSPSKFVAGSWE--P--NQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 121 ~~~f~I~~yPTl~~f~~g~~~~~~~~--~--~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|++|+|+++||+++|.+|++...... + ...+.....|.|.++.+.|++|+.++++..+
T Consensus 84 ~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v 145 (298)
T 3ed3_A 84 CAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYV 145 (298)
T ss_dssp HHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCE
T ss_pred HHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhccccc
Confidence 99999999999999998864221000 0 0001234678999999999999999987544
No 25
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.73 E-value=3e-18 Score=152.74 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=93.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--ChhHhhhhHHHHHHHHHhCCCCCCCCCe-EEEEEeeccccccHHHHHh
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI-ILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~W--Cg~C~~~~P~~~~lA~~~~~~~~~~~~~-v~~~~VDc~~d~~~~l~~~ 123 (521)
.+..+|+++|++.+.. ++++||+|||+| ||+|+.++|.++++++++. ++ +.|++||. |++++++.+
T Consensus 18 g~~~~t~~~F~~~v~~--~~~vlVdF~a~~crCgpCk~iaPvleela~e~~-------g~~v~~~KVdv--De~~~lA~~ 86 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQ--APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP-------DYTWQVAIADL--EQSEAIGDR 86 (140)
T ss_dssp TCEECCHHHHHHHHHT--CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT-------TSCCEEEECCH--HHHHHHHHH
T ss_pred CCccCCHHHHHHHHhC--CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC-------CCeEEEEEEEC--CCCHHHHHH
Confidence 4779999999999853 367899999999 9999999999999999986 56 99999997 679999999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|+++||+++|++|+. +.+..|..+.+.|.++|++.+.
T Consensus 87 ygV~sIPTlilFk~G~~-------------v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 87 FGAFRFPATLVFTGGNY-------------RGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp HTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCccCCEEEEEECCEE-------------EEEEecCCCHHHHHHHHHHHhc
Confidence 99999999999999854 4567899999999999998874
No 26
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=1.7e-17 Score=145.35 Aligned_cols=111 Identities=19% Similarity=0.399 Sum_probs=94.8
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
...+.++.++.++|+..+.+. ++++||+||++||++|+.+.|.++++++.+. +.+.++.||+ +++.++++
T Consensus 14 ~~~~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 83 (130)
T 2dml_A 14 SSSDDVIELTPSNFNREVIQS-DGLWLVEFYAPWCGHCQRLTPEWKKAATALK-------DVVKVGAVNA--DKHQSLGG 83 (130)
T ss_dssp CTTSSSEECCTTTHHHHTTTC-SSCEEEEEECTTCSTTGGGHHHHHHHHHHTT-------TTSEEEEEET--TTCHHHHH
T ss_pred CCCCCcEECCHHHHHHHHhcC-CCeEEEEEECCCCHHHHhhCHHHHHHHHHhc-------CceEEEEEeC--CCCHHHHH
Confidence 345679999999999977654 5789999999999999999999999999986 3488999998 46889999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|+|+++||+++|.+|.. .+..+.|.++.++|.+|+.+.+.
T Consensus 84 ~~~v~~~Pt~~~~~~~~~------------~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKN------------KPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHTCCSSSEEEEESSCTT------------SCEECCSCCSHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCC------------eEEEeecCCCHHHHHHHHHHHHh
Confidence 999999999999987532 13567899999999999998874
No 27
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.73 E-value=1.9e-17 Score=148.87 Aligned_cols=110 Identities=22% Similarity=0.470 Sum_probs=96.0
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.....+..++.++|+..+. .+++++|+|||+||++|+.+.|.|+++++.+. +.+.|+.||+ +++.++++
T Consensus 35 ~~~~~v~~l~~~~~~~~~~--~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~--~~~~~l~~ 103 (148)
T 3p2a_A 35 LFDGEVINATAETLDKLLQ--DDLPMVIDFWAPWCGPCRSFAPIFAETAAERA-------GKVRFVKVNT--EAEPALST 103 (148)
T ss_dssp TTCCCCEECCTTTHHHHTT--CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHH
T ss_pred cccCCceecCHHHHHHHHh--cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CceEEEEEEC--cCCHHHHH
Confidence 3456799999999999983 35889999999999999999999999999986 3489999998 56899999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+|+++||+++|++|+. +..+.|..+.+.|.+||++.++.
T Consensus 104 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 104 RFRIRSIPTIMLYRNGKM-------------IDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp HTTCCSSSEEEEEETTEE-------------EEEESSCCCHHHHHHHHHHHHHS
T ss_pred HCCCCccCEEEEEECCeE-------------EEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999999999987743 35678999999999999998764
No 28
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=2e-17 Score=140.96 Aligned_cols=107 Identities=21% Similarity=0.423 Sum_probs=90.8
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
...+..++.++|++.+.+..+++++|.|||+||++|+.+.|.++++++.+. .+.++.||++ +++.+++++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~~-~~~~~~~~~~ 74 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 74 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--------CeEEEEEecC-cchHHHHHHc
Confidence 456899999999999987567899999999999999999999999999874 2889999994 3678999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+|+++||++++++|+. +..+.|. +.++|.++|++.+
T Consensus 75 ~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 75 GIRVVPTFKILKENSV-------------VGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp CCSBSSEEEEESSSSE-------------EEEEESS-CHHHHHHHHHHHH
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCC-CHHHHHHHHHHhh
Confidence 9999999999888743 2345676 4889999998764
No 29
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.73 E-value=4.5e-18 Score=145.89 Aligned_cols=116 Identities=27% Similarity=0.564 Sum_probs=96.7
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
...+.+..++.++|+..+.+. ++++|.||++||++|+.+.|.++++++.+.+.+ ..+.++.|||+ ++.++++
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~~--~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~----~~v~~~~vd~~--~~~~~~~ 75 (120)
T 1mek_A 4 EEEDHVLVLRKSNFAEALAAH--KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEG----SEIRLAKVDAT--EESDLAQ 75 (120)
T ss_dssp CEETTEEECCTTTHHHHHHHC--SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTC----CCCBCEEEETT--TCCSSHH
T ss_pred cCCCCcEEechhhHHHHHccC--CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccC----CcEEEEEEcCC--CCHHHHH
Confidence 345678999999999988753 789999999999999999999999999986532 35889999994 5678999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+|+|+++||+++|++|+... ...+.|..+.+.|.+||++.++..
T Consensus 76 ~~~v~~~Pt~~~~~~g~~~~-----------~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 76 QYGVRGYPTIKFFRNGDTAS-----------PKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp HHTCCSSSEEEEEESSCSSS-----------CEECCCCSSHHHHHHHHHTTSCCC
T ss_pred HCCCCcccEEEEEeCCCcCC-----------cccccCccCHHHHHHHHHhccCCC
Confidence 99999999999998774321 145778899999999999887643
No 30
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.73 E-value=1.6e-17 Score=151.26 Aligned_cols=109 Identities=15% Similarity=0.361 Sum_probs=94.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
....+++++.++|++.+. .++++||+|||+||++|+.+.|.++++++.+. +.+.|+.||+ +++++++++
T Consensus 45 ~~~~~~~l~~~~f~~~~~--~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~-------~~v~~~~vd~--~~~~~l~~~ 113 (155)
T 2ppt_A 45 ITGKVAGIDPAILARAER--DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA-------GQVRLAKIDT--QAHPAVAGR 113 (155)
T ss_dssp CCSSEEECCHHHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--TTSTHHHHH
T ss_pred cCCCCccCCHHHHHHHHh--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CCEEEEEEeC--CccHHHHHH
Confidence 345688999999999983 35789999999999999999999999999986 3489999998 467899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|+++||+++|++|+. +..+.|..+.++|.+||++.++.
T Consensus 114 ~~i~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 114 HRIQGIPAFILFHKGRE-------------LARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC-
T ss_pred cCCCcCCEEEEEeCCeE-------------EEEecCCCCHHHHHHHHHHHhcc
Confidence 99999999999987743 35678999999999999998764
No 31
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.72 E-value=1.9e-17 Score=147.17 Aligned_cols=111 Identities=19% Similarity=0.382 Sum_probs=92.1
Q ss_pred cccCcceecCcccHHHHHhcC----------CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeec
Q 009987 43 VEVDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~----------~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (521)
.....++.++.++|+..+.+. +++++||+|||+||++|+.+.|.++++++.+. +.+.++.||+
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~ 91 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA-------GKIYIYKVNV 91 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEET
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CceEEEEEEC
Confidence 345579999999999988763 25889999999999999999999999999986 3589999998
Q ss_pred cccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 113 ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 113 ~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++.+++++|+|+++||+++|.++. . +..+.|..+.+.|.++|++.+.
T Consensus 92 --~~~~~~~~~~~v~~~Pt~~~~~~~g------------~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 92 --DKEPELARDFGIQSIPTIWFVPMKG------------E-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp --TTCHHHHHHTTCCSSSEEEEECSSS------------C-CEEEESCCCHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHcCCCCcCEEEEEeCCC------------C-EEEEeCCCCHHHHHHHHHHHHc
Confidence 5689999999999999999985331 1 2357899999999999998765
No 32
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.72 E-value=3e-17 Score=160.33 Aligned_cols=121 Identities=17% Similarity=0.347 Sum_probs=100.5
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
...+++.+|++++|+..+.+. +++++|+|||+||++|+++.|.|+++++.+.+++ ..+.++.|||+.+++.++|+
T Consensus 9 ~~~~~v~~l~~~~f~~~i~~~-~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~~~~~~l~~ 83 (244)
T 3q6o_A 9 SPSDPLTLLQADTVRGAVLGS-RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWR----PALYLAALDCAEETNSAVCR 83 (244)
T ss_dssp CTTSSSEEECTTTHHHHHSSC-SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGT----TTEEEEEEETTSTTTHHHHH
T ss_pred CCCCCceeCChhhHHHHHhhC-CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhcc----CcEEEEEEeCCchhhHHHHH
Confidence 456789999999999988765 4789999999999999999999999999997532 36999999998778999999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+|+|+++||+++|.+|+..+. +..+ .+.| ++.+.|.++|.+.+...
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~-------g~~~-~~~g-~~~~~l~~~i~~~l~~~ 129 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGS-------GAVF-PVAG-ADVQTLRERLIDALESH 129 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSS-------CEEC-CCTT-CCHHHHHHHHHHHHHTC
T ss_pred HcCCCccCEEEEEeCCCcCCC-------CeeE-ecCC-CCHHHHHHHHHHHHHhc
Confidence 999999999999987643321 1122 4555 79999999999988754
No 33
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=3.3e-17 Score=137.87 Aligned_cols=105 Identities=20% Similarity=0.466 Sum_probs=90.7
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+.++.++.++|+..+.. .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 2 ~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~~--~~~~~~~~~~ 71 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLK-ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA-------GKVTVAKVNID--DNPETPNAYQ 71 (107)
T ss_dssp CCEEECCTTTHHHHTTT-CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TSEEEEEEETT--TCCHHHHHTT
T ss_pred CceeecchhhhhHHHHh-CCCEEEEEEECCCChhHHHHhHHHHHHHHHhC-------CcEEEEEEECC--CCHHHHHhcC
Confidence 45889999999988754 35789999999999999999999999999986 35999999984 5788999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHh
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~ 173 (521)
|.++||+++|++|+. +..+.|..+.+.|.++|++.
T Consensus 72 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 72 VRSIPTLMLVRDGKV-------------IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCEE-------------EEEecCCCCHHHHHHHHHhc
Confidence 999999999987743 34577889999999999875
No 34
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.72 E-value=1.7e-17 Score=165.54 Aligned_cols=109 Identities=17% Similarity=0.387 Sum_probs=96.2
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.|+++|.++|++.+..+++++++|+|||+|||+|+.+.|.|+++++++. +.+.|+.||| +++++++++|
T Consensus 6 ~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~~ 76 (287)
T 3qou_A 6 VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYN-------GQFILAKLDC--DAEQMIAAQF 76 (287)
T ss_dssp CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT-------SSSEEEEEET--TTCHHHHHTT
T ss_pred CCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcC-------CCeEEEEEeC--ccCHHHHHHc
Confidence 456899999999998877667899999999999999999999999999986 3589999999 4689999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|+++||+++|++|+. +..+.|..+.+.+.+++.+.++
T Consensus 77 ~v~~~Pt~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 77 GLRAIPTVYLFQNGQP-------------VDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHSC
T ss_pred CCCCCCeEEEEECCEE-------------EEEeeCCCCHHHHHHHHHHHcC
Confidence 9999999999987743 3567899999999999988763
No 35
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.72 E-value=3e-17 Score=138.84 Aligned_cols=104 Identities=16% Similarity=0.252 Sum_probs=85.7
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
+.++ +.++|++.+.+..+++++|.|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--------~~~~~~vd~--~~~~~~~~~~~v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--------QAVFLEVDV--HQCQGTAATNNI 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHTTC
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCHHHHHhcCC
Confidence 3444 67899999965456889999999999999999999999999973 389999998 468899999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++||+++|++|+. +.++.| .+.++|.++|++.++
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~lg 107 (107)
T 1gh2_A 73 SATPTFQFFRNKVR-------------IDQYQG-ADAVGLEEKIKQHLE 107 (107)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHC
T ss_pred CcccEEEEEECCeE-------------EEEEeC-CCHHHHHHHHHHhcC
Confidence 99999999987743 345667 455669999988764
No 36
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.72 E-value=2.8e-17 Score=142.28 Aligned_cols=109 Identities=22% Similarity=0.394 Sum_probs=93.7
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.+..+++++|++.+.+. ++++||.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~-~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~vd~--d~~~~l~~~ 80 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNS-ETPVVVDFHAQWCGPCKILGPRLEKMVAKQH-------GKVVMAKVDI--DDHTDLAIE 80 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TSSEEEEEET--TTTHHHHHH
T ss_pred CceEEEecChhhHHHHHHcC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--CCCHHHHHH
Confidence 45679999999999988654 5789999999999999999999999999985 3489999998 467899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|.++||+++|++|+. +..+.|..+.+.|.++|++.++
T Consensus 81 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 119 (119)
T 1w4v_A 81 YEVSAVPTVLAMKNGDV-------------VDKFVGIKDEDQLEAFLKKLIG 119 (119)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEeCCcE-------------EEEEcCCCCHHHHHHHHHHHhC
Confidence 99999999999987743 3457788899999999988763
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.72 E-value=2e-17 Score=138.97 Aligned_cols=103 Identities=19% Similarity=0.413 Sum_probs=88.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
++++++++|+..+.+. ++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|+
T Consensus 2 v~~l~~~~~~~~~~~~--~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--~~~~~~~~~~~v~ 70 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGD--GPVLVDFWAAWCGPCRMMAPVLEEFAEAHA-------DKVTVAKLNV--DENPETTSQFGIM 70 (105)
T ss_dssp CEEECTTTHHHHHSSS--SCEEEEEECTTCHHHHHHHHHHHHHHHHST-------TTCEEEEEET--TTCHHHHHHTTCC
T ss_pred ceeccHHhHHHHHhCC--CcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--cCCHHHHHHcCCc
Confidence 6789999999766543 789999999999999999999999999985 3489999998 4688999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 71 ~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 71 SIPTLILFKGGRP-------------VKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp SSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTTTTT
T ss_pred cccEEEEEeCCeE-------------EEEEecCCCHHHHHHHHHHHh
Confidence 9999999987743 345778899999999987654
No 38
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.72 E-value=4e-17 Score=139.18 Aligned_cols=108 Identities=17% Similarity=0.376 Sum_probs=93.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.+.+++.++|+..+.+ .+++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~--~~~~~~~~~~ 75 (115)
T 1thx_A 6 SKGVITITDAEFESEVLK-AEQPVLVYFWASWCGPCQLMSPLINLAANTYS-------DRLKVVKLEI--DPNPTTVKKY 75 (115)
T ss_dssp CCSEEECCGGGHHHHTTT-CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT-------TTCEEEEEES--TTCHHHHHHT
T ss_pred cCceEEeeccchhhHhhc-CCceEEEEEECCCCHHHHHhHHHHHHHHHHhC-------CcEEEEEEEc--CCCHHHHHHc
Confidence 345899999999988754 35789999999999999999999999999986 3489999998 4678999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|.++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 76 ~v~~~Pt~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 76 KVEGVPALRLVKGEQI-------------LDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHC
T ss_pred CCCceeEEEEEcCCEE-------------EEEecCCCCHHHHHHHHHHHhc
Confidence 9999999999987743 3457788999999999998875
No 39
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=144.78 Aligned_cols=114 Identities=20% Similarity=0.408 Sum_probs=95.6
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
....+..++.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+.... .+.+.++.|||+ ++.+++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~---~~~~~~~~vd~~--~~~~l~~~ 78 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDS-EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQT---KGKVKLAAVDAT--VNQVLASR 78 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTS-SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHT---TTSEEEEEEETT--TCCHHHHH
T ss_pred CCCcCEEcCHhhHHHHHhcC-CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhc---CCcEEEEEEECC--CCHHHHHh
Confidence 45568999999999988654 4789999999999999999999999999985100 024999999994 67899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|+++||+++|.+|+ .+..+.|.++.++|.+||.+.+..
T Consensus 79 ~~v~~~Pt~~~~~~g~-------------~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 79 YGIRGFPTIKIFQKGE-------------SPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp HTCCSSSEEEEEETTE-------------EEEEECSCCSHHHHHHHHHHHHHH
T ss_pred CCCCeeCeEEEEeCCC-------------ceEEecCCCCHHHHHHHHHHHhhc
Confidence 9999999999998774 235678999999999999998764
No 40
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.71 E-value=1.7e-17 Score=148.01 Aligned_cols=110 Identities=15% Similarity=0.281 Sum_probs=94.9
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.+.+++.++|++.+.+. ++++||+|||+||++|+.+.|.++++++.+. +.+.|+.||+ +++.+++++
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~-~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~ 73 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDS-KKPVVVMFYSPACPYCKAMEPYFEEYAKEYG-------SSAVFGRINI--ATNPWTAEK 73 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEET--TTCHHHHHH
T ss_pred CCcceEEcchHhHHHHHHhC-CCcEEEEEECCCChhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CcCHhHHHH
Confidence 34568999999999766554 5889999999999999999999999999986 3489999999 468999999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|+++||+++|++|+. +..+.|..+.+.|.++|++.+..
T Consensus 74 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 74 YGVQGTPTFKFFCHGRP-------------VWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp HTCCEESEEEEEETTEE-------------EEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCEEEEEeCCcE-------------EEEEcCCCCHHHHHHHHHHHhcc
Confidence 99999999999987743 35678999999999999988753
No 41
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.71 E-value=4.2e-17 Score=137.33 Aligned_cols=106 Identities=24% Similarity=0.476 Sum_probs=90.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.+++++.++|+..+... ++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 2 ~v~~l~~~~~~~~~~~~--~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 70 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQH--PLVLVDFWAEWCAPCRMIAPILEEIAKEYE-------GKLLVAKLDV--DENPKTAMRYRV 70 (109)
T ss_dssp CCEECCTTTHHHHHHHC--SEEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--TTCHHHHHHTTC
T ss_pred cceEccHhHHHHHhcCC--CeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CceEEEEEEC--CCCHhHHHhCCC
Confidence 47889999999877653 789999999999999999999999999986 3489999998 468899999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
.++||+++|++|+. +..+.|..+.++|.++|++.++.
T Consensus 71 ~~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 71 MSIPTVILFKDGQP-------------VEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHTTC--
T ss_pred CcCCEEEEEeCCcE-------------eeeEeCCCCHHHHHHHHHHHhhh
Confidence 99999999977743 34577889999999999988754
No 42
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.71 E-value=4.2e-17 Score=138.86 Aligned_cols=106 Identities=16% Similarity=0.328 Sum_probs=91.4
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.+..++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 6 ~v~~l~~~~~~~~~~~~-~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 75 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKN-DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYG-------DKIEIVKLNI--DENPGTAAKYGV 75 (112)
T ss_dssp CCEEECTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTTC
T ss_pred eEEecchhhHHHHHhhC-CCeEEEEEECCCCHhHHhcCHHHHHHHHHhc-------CCeEEEEEEc--CCCHHHHHhCCC
Confidence 47899999999877654 5789999999999999999999999999985 3489999998 468899999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++||+++|++|+. +..+.|..+.+.|.++|++.+.
T Consensus 76 ~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 76 MSIPTLNVYQGGEV-------------AKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTHHHHC
T ss_pred CcccEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhh
Confidence 99999999987743 3457888999999999988764
No 43
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=3.4e-17 Score=142.82 Aligned_cols=108 Identities=21% Similarity=0.462 Sum_probs=92.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.++.++.++|++.+.+ .++|+|||+||++|+.+.|.++++++.+.+ ..+.++.||+ +++.+++++
T Consensus 5 ~~~~v~~l~~~~f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~------~~v~~~~vd~--~~~~~~~~~ 72 (126)
T 1x5e_A 5 SSGNVRVITDENWRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGED------LEVNIAKVDV--TEQPGLSGR 72 (126)
T ss_dssp CCCSEEECCTTTHHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGG------GTCEEEEEET--TTCHHHHHH
T ss_pred CCCccEEecHHHHHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhcc------CCeEEEEEEC--cCCHHHHHH
Confidence 3456999999999987643 289999999999999999999999999863 2489999998 468899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
|+|+++||+++|++|+ +..+.|..+.++|.+||++.++..
T Consensus 73 ~~v~~~Pt~~~~~~G~--------------~~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 73 FIINALPTIYHCKDGE--------------FRRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp TTCCSSSEEEEEETTE--------------EEECCSCCCHHHHHHHHHTCGGGG
T ss_pred cCCcccCEEEEEeCCe--------------EEEeecCCCHHHHHHHHHHHhhcc
Confidence 9999999999997764 245788999999999999887654
No 44
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.71 E-value=3.9e-17 Score=137.75 Aligned_cols=104 Identities=16% Similarity=0.354 Sum_probs=90.1
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+..++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|+
T Consensus 3 v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v~ 72 (107)
T 1dby_A 3 AGAVNDDTFKNVVLES-SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK-------DKLKCVKLNT--DESPNVASEYGIR 72 (107)
T ss_dssp CEEECHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHHTCC
T ss_pred cEeccHHHHHHHHhcC-CCcEEEEEECCCCHhHHHHHHHHHHHHHHhC-------CceEEEEEEC--CCCHHHHHHCCCC
Confidence 6789999999987654 5789999999999999999999999999985 3489999998 4688999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 73 ~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 73 SIPTIMVFKGGKK-------------CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSCEEEEESSSSE-------------EEEEESCCCHHHHHHHHHHHC
T ss_pred cCCEEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 9999999987743 345778899999999998865
No 45
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.71 E-value=3.8e-17 Score=141.43 Aligned_cols=107 Identities=23% Similarity=0.524 Sum_probs=90.1
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+.+..++.++|++.+.+. +++++|.|||+||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+
T Consensus 3 ~~v~~l~~~~f~~~~~~~-~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~~~ 72 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQG-KTHWVVDFYAPWCGPCQNFAPEFELLARMIK-------GKVRAGKVDC--QAYPQTCQKAG 72 (122)
T ss_dssp CCSEECCHHHHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTCEEEEEET--TTCHHHHHHTT
T ss_pred cchhcCCHHHHHHHHhcC-CCeEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEeC--cCCHHHHHHcC
Confidence 458899999998766544 4789999999999999999999999999986 3589999999 46889999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhcccc----CCHHHHHHHHHHhcc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~----~~~~~L~~~i~~~l~ 175 (521)
|+++||+++|.+|. .+..+.|. ++.+.|.++|++.+.
T Consensus 73 v~~~Pt~~~~~~~~-------------~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 73 IKAYPSVKLYQYER-------------AKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp CCSSSEEEEEEEEG-------------GGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CCccceEEEEeCCC-------------ccceeeccccCcCCHHHHHHHHHHHHH
Confidence 99999999996652 23445554 899999999998875
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.71 E-value=5.3e-17 Score=135.35 Aligned_cols=103 Identities=19% Similarity=0.422 Sum_probs=89.9
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
|++++.++|++.+.+ +++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.+++++|+|+
T Consensus 1 V~~l~~~~~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~v~~--~~~~~~~~~~~v~ 68 (104)
T 2e0q_A 1 VIHLDSKNFDSFLAS--HEIAVVDFWAEWCAPCLILAPIIEELAEDYP-------Q-VGFGKLNS--DENPDIAARYGVM 68 (104)
T ss_dssp CEECCTTTHHHHHHH--SSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHHHTTCC
T ss_pred CeecCHHHHHHHHhc--CCcEEEEEECCCChhHHHHhHHHHHHHHHcC-------C-ceEEEEEC--CCCHHHHHhCCcc
Confidence 468899999999965 4789999999999999999999999999885 3 89999998 4688999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
++||+++|++|+. +..+.|..+.++|.++|++.++
T Consensus 69 ~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 69 SLPTVIFFKDGEP-------------VDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp SSCEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccCEEEEEECCeE-------------hhhccCCCCHHHHHHHHHHHhc
Confidence 9999999987743 3457888999999999998764
No 47
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.70 E-value=2.6e-17 Score=144.82 Aligned_cols=106 Identities=17% Similarity=0.364 Sum_probs=91.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+.+++++.++|+..+.+ .+++++|+|||+||++|+.+.|.++++++.+. +.+.++.||++ ++.+++++|+
T Consensus 22 ~~v~~l~~~~f~~~~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~~--~~~~l~~~~~ 91 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLK-ADGAILVDFWAEWCGPAKMIAPILDEIADEYQ-------GKLTVAKLNID--QNPGTAPKYG 91 (128)
T ss_dssp CCSEEECTTTHHHHTTT-CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT-------TTEEEEEEETT--TCCTTSGGGT
T ss_pred cccEecChhhHHHHHHh-cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEECC--CCHHHHHHcC
Confidence 45889999999987754 35889999999999999999999999999985 35999999984 5778999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 92 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 92 IRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred CCccCEEEEEeCCEE-------------EEEEcCCCCHHHHHHHHHHhh
Confidence 999999999977743 345788899999999998875
No 48
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.70 E-value=7.7e-17 Score=142.96 Aligned_cols=110 Identities=20% Similarity=0.392 Sum_probs=93.6
Q ss_pred cCcceecCcccHHHHHhcC----------CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc
Q 009987 45 VDHAVELNATNFDAVLRDT----------PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL 114 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~----------~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~ 114 (521)
...++.++.++|++.+.+. .+++++|+|||+||++|+.+.|.++++++.+. +.+.++.||+
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~-- 78 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYD-------GQIVIYKVDT-- 78 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCEEEEEEeC--
Confidence 3458899999999988752 35789999999999999999999999999986 3489999998
Q ss_pred cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 115 KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 115 d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+++.+++++|+|+++||+++| ++|+. + .+.|..+.++|.++|++.++..
T Consensus 79 ~~~~~l~~~~~v~~~Pt~~~~~~~G~~-------------~-~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 79 EKEQELAGAFGIRSIPSILFIPMEGKP-------------E-MAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TTCHHHHHHTTCCSSCEEEEECSSSCC-------------E-EEESCCCHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHcCCCCCCEEEEECCCCcE-------------E-EEeCCCCHHHHHHHHHHHhhcc
Confidence 467899999999999999999 56532 2 4678899999999999987653
No 49
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.70 E-value=6.3e-17 Score=174.50 Aligned_cols=117 Identities=26% Similarity=0.476 Sum_probs=100.1
Q ss_pred CccccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHH
Q 009987 41 KKVEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (521)
Q Consensus 41 ~p~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l 120 (521)
.....+.|+.|+.++|++.+.+ ++++||+|||||||||+++.|.|+++++.+.+. .+.+++|||+ ++.++
T Consensus 9 ~~~~~~~v~~l~~~~f~~~~~~--~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~------~v~~~~vd~~--~~~~l 78 (504)
T 2b5e_A 9 VAPEDSAVVKLATDSFNEYIQS--HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK------NITLAQIDCT--ENQDL 78 (504)
T ss_dssp SCCTTSSCEECCTTTHHHHHTT--CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------TCEEEEEETT--TCHHH
T ss_pred CCCCCCCcEECCHHHHHHHHhc--CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC------CeEEEEEECC--CCHHH
Confidence 3345677999999999999865 478999999999999999999999999999732 3899999994 67999
Q ss_pred HHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 121 CDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 121 ~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|++|+|++|||+++|++|+.. .+..|.|.++.+.|.+|+.+.++..+
T Consensus 79 ~~~~~v~~~Pt~~~~~~g~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~v 125 (504)
T 2b5e_A 79 CMEHNIPGFPSLKIFKNSDVN-----------NSIDYEGPRTAEAIVQFMIKQSQPAV 125 (504)
T ss_dssp HHHTTCCSSSEEEEEETTCTT-----------CEEECCSCCSHHHHHHHHHHHTSCSE
T ss_pred HHhcCCCcCCEEEEEeCCccc-----------cceeecCCCCHHHHHHHHHHhcCCcc
Confidence 999999999999999887421 13568899999999999999987654
No 50
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.70 E-value=8.7e-17 Score=134.75 Aligned_cols=104 Identities=15% Similarity=0.379 Sum_probs=89.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
|..++.++|+..+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|+
T Consensus 2 v~~~~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v~ 71 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLES-EVPVMVDFWAPWCGPCKLIAPVIDELAKEYS-------GKIAVYKLNT--DEAPGIATQYNIR 71 (105)
T ss_dssp CEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHHTTCC
T ss_pred ceechhhhHHHHHhcC-CCcEEEEEECCCChHHHHHHHHHHHHHHHhc-------CceEEEEEcC--cchHHHHHhCCCC
Confidence 6788999999988654 5789999999999999999999999999985 3489999998 4678999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++||+++|++|+. +..+.|..+.+.|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 72 SIPTVLFFKNGER-------------KESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp SSSEEEEEETTEE-------------EEEEEECCCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCeE-------------EEEEecCCCHHHHHHHHHhhC
Confidence 9999999987743 345778899999999998753
No 51
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.70 E-value=4.5e-17 Score=169.75 Aligned_cols=116 Identities=21% Similarity=0.500 Sum_probs=94.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+.|+.|++++|+..+.+. +++||+|||||||||++++|.|+++|+.+++..+ ..+.+.++.|||+ ++.++|++|+
T Consensus 5 ~~v~~l~~~~f~~~~~~~--~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~-~~~~v~~~~Vd~~--~~~~l~~~~~ 79 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNA--DVALVNFYADWCRFSQMLHPIFEEASDVIKEEFP-NENQVVFARVDCD--QHSDIAQRYR 79 (382)
T ss_dssp ---CBCCTTTHHHHHHHC--SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC----CCEEEEEEETT--TCHHHHHHTT
T ss_pred CceEECCHHHHHHHHhcC--CeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcC-CCCceEEEEEECC--ccHHHHHhcC
Confidence 358899999999988764 7899999999999999999999999999953210 0145999999995 6799999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|++|||+++|++|+... ..|.|.++.+.|.+|+.++++..+
T Consensus 80 v~~~Pt~~~f~~G~~~~------------~~~~G~~~~~~l~~~i~~~~~~~v 120 (382)
T 2r2j_A 80 ISKYPTLKLFRNGMMMK------------REYRGQRSVKALADYIRQQKSDPI 120 (382)
T ss_dssp CCEESEEEEEETTEEEE------------EECCSCCSHHHHHHHHHHHHSCCC
T ss_pred CCcCCEEEEEeCCcEee------------eeecCcchHHHHHHHHHHhccCCc
Confidence 99999999998874320 148899999999999999987644
No 52
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.70 E-value=7.8e-17 Score=140.00 Aligned_cols=107 Identities=21% Similarity=0.463 Sum_probs=90.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
...+..++.++|++.+.+..+++++|.|||+||++|+.+.|.++++++++. .+.++.||++ +++.+++++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~~~~~~vd~~-~~~~~~~~~~ 87 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--------DVIFLKLDCN-QENKTLAKEL 87 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECS-STTHHHHHHH
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--------CCEEEEEecC-cchHHHHHHc
Confidence 345889999999999886566889999999999999999999999999874 2789999984 3578999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+|+++||++++++|+. +..+.|.. .++|.++|++.+
T Consensus 88 ~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 88 GIRVVPTFKILKENSV-------------VGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp CCSSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHT
T ss_pred CCCeeeEEEEEeCCcE-------------EEEEcCCC-HHHHHHHHHHhh
Confidence 9999999999988743 24466765 889999998754
No 53
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.70 E-value=8.2e-17 Score=135.16 Aligned_cols=104 Identities=16% Similarity=0.424 Sum_probs=88.1
Q ss_pred ceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 48 AVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 48 v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
+.+++. ++|++.+.+..+++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++|+|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFA-------DNVVVLKVDV--DECEDIAMEYNI 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTTC
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC-------CCeEEEEEec--cchHHHHHHcCC
Confidence 456777 899999885456899999999999999999999999999985 3499999998 468899999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 73 ~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK-------------VEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp CSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHTC
T ss_pred CcccEEEEEcCCcE-------------EEEEcC-CCHHHHHHHHHHhC
Confidence 99999999987743 345677 78899999998753
No 54
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.4e-17 Score=138.88 Aligned_cols=106 Identities=13% Similarity=0.337 Sum_probs=85.7
Q ss_pred ceecCc-ccHHHHHhc-CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 48 AVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 48 v~~L~~-~~f~~~l~~-~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+..++. ++|++.+.. ..+++++|.|||+||++|+.+.|.++++++.+.. +.+.++.||+ +++.+++++|+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~------~~~~~~~vd~--~~~~~~~~~~~ 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN------SNVSFLSIDA--DENSEISELFE 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG------TTSEEEEEET--TTCHHHHHHTT
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC------CCEEEEEEec--ccCHHHHHHcC
Confidence 667887 999999876 4568899999999999999999999999998642 2489999998 46889999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+++||+++|++|+. +..+.|. ..++|.++|++.++
T Consensus 74 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 74 ISAVPYFIIIHKGTI-------------LKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp CCSSSEEEEEETTEE-------------EEEECSC-CHHHHHHHHHHHHH
T ss_pred CCcccEEEEEECCEE-------------EEEecCC-CHHHHHHHHHHHHh
Confidence 999999999987743 3456675 45679999988764
No 55
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.69 E-value=5.5e-17 Score=137.97 Aligned_cols=106 Identities=19% Similarity=0.359 Sum_probs=89.0
Q ss_pred cceec-CcccHHHHHhcCC--CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 47 HAVEL-NATNFDAVLRDTP--ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 47 ~v~~L-~~~~f~~~l~~~~--~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.++.+ +.++|++.+.+.. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~ 73 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA-------GKVIFLKVDV--DAVAAVAEA 73 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTSEEEEEET--TTTHHHHHH
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-------CCeEEEEEEC--CchHHHHHH
Confidence 36667 5689999887633 4789999999999999999999999999985 3489999998 468899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|+++||+++|++|+. +..+.|. +.++|.++|++.+.
T Consensus 74 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 74 AGITAMPTFHVYKDGVK-------------ADDLVGA-SQDKLKALVAKHAA 111 (112)
T ss_dssp HTCCBSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHC
T ss_pred cCCCcccEEEEEECCeE-------------EEEEcCC-CHHHHHHHHHHHhc
Confidence 99999999999987743 3456777 89999999988763
No 56
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.69 E-value=1.3e-16 Score=135.94 Aligned_cols=102 Identities=21% Similarity=0.337 Sum_probs=86.2
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.....+.++|++.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 8 ~~~~~~~~~f~~~~~~--~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~--------~~~~~~vd~--~~~~~l~~~~~v 75 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQ--DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP--------QADFYKLDV--DELGDVAQKNEV 75 (109)
T ss_dssp CEECCSHHHHHHHTTS--SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTC
T ss_pred ccCCCCHHHHHHHHhc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHHcCC
Confidence 3456678999999876 4889999999999999999999999999984 278999998 568999999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++||+++|.+|+. +.++.|. +.+.|.++|++.+
T Consensus 76 ~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 76 SAMPTLLLFKNGKE-------------VAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp CSSSEEEEEETTEE-------------EEEEESS-CHHHHHHHHHHHC
T ss_pred CccCEEEEEECCEE-------------EEEEeCC-CHHHHHHHHHhhC
Confidence 99999999987743 3456676 7799999998753
No 57
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=1.1e-16 Score=134.29 Aligned_cols=99 Identities=19% Similarity=0.385 Sum_probs=86.0
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCce
Q 009987 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (521)
Q Consensus 52 ~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPT 131 (521)
+.++|++.+.+.++++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.+++++|+|+++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~-~~~~~vd~--~~~~~~~~~~~v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS-------N-VIFLEVDV--DDCQDVASESEVKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST-------T-SEEEEEET--TTCHHHHHHTTCCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc-------C-eEEEEEEh--hhhHHHHHHcCCCcCcE
Confidence 56889999986667899999999999999999999999999884 2 88999998 56899999999999999
Q ss_pred EEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 77 ~~~~~~g~~-------------~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 77 FQFFKKGQK-------------VGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp EEEEETTEE-------------EEEEESS-CHHHHHHHHHHHC
T ss_pred EEEEECCeE-------------EEEEeCC-CHHHHHHHHHHhC
Confidence 999987743 3457787 9999999998764
No 58
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.69 E-value=1.7e-17 Score=140.19 Aligned_cols=98 Identities=11% Similarity=0.101 Sum_probs=72.8
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCce
Q 009987 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (521)
Q Consensus 52 ~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPT 131 (521)
+.++|++.+.+ +++++|+|||+||++|+.+.|.++++++.+. .+.++.||+ +++++++++|+|+++||
T Consensus 7 ~~~~~~~~~~~--~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--------~~~~~~vd~--~~~~~l~~~~~v~~~Pt 74 (105)
T 4euy_A 7 TIEELATYIEE--QQLVLLFIKTENCGVCDVMLRKVNYVLENYN--------YVEKIEILL--QDMQEIAGRYAVFTGPT 74 (105)
T ss_dssp ---CCSSSTTC--SSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--------TEEEEEEEE--CCC---------CCCCE
T ss_pred CHHHHHHHHhc--CCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--------CceEEEEEC--CCCHHHHHhcCCCCCCE
Confidence 45667766643 4889999999999999999999999999873 389999998 46889999999999999
Q ss_pred EEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++|++|+. +.++.|..+.++|.++|++.+
T Consensus 75 ~~~~~~G~~-------------~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 75 VLLFYNGKE-------------ILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEETTEE-------------EEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEeCCeE-------------EEEEeCCcCHHHHHHHHHHhh
Confidence 999987743 356788899999999998764
No 59
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.69 E-value=8.4e-17 Score=138.74 Aligned_cols=109 Identities=17% Similarity=0.346 Sum_probs=92.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
....+..++.++|...+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.||+ +++.+++++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~ 79 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSS-NKPVLVDFWATWCGPCKMVAPVLEEIATERA-------TDLTVAKLDV--DTNPETARN 79 (121)
T ss_dssp --CCSEECCTTTHHHHTTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCHHHHHH
T ss_pred hcccceecCHHHHHHHHHhC-CCcEEEEEECCCCHHHHHHHHHHHHHHHHhc-------CCeEEEEEEC--CCCHHHHHh
Confidence 34568999999999877654 4789999999999999999999999999985 3489999998 468899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|.++||+++|++|+. +..+.|..+.+.|.++|++.++
T Consensus 80 ~~i~~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 80 FQVVSIPTLILFKDGQP-------------VKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHTCSCCC
T ss_pred cCCCcCCEEEEEECCEE-------------EEEecCCCCHHHHHHHHHHHHh
Confidence 99999999999987743 3457888999999999977654
No 60
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=9.7e-18 Score=148.89 Aligned_cols=88 Identities=24% Similarity=0.406 Sum_probs=78.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
++.++.++.++|++.+.+.++++++|+|||+||++|+.+.|.|+++++++.+ ..+.++.||+ +++.+++++|
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~------~~v~~~~vd~--~~~~~~~~~~ 77 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC------TGLNFGKVDV--GRYTDVSTRY 77 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS------SSCEEEECCT--TTCHHHHHHT
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC------CCeEEEEEeC--ccCHHHHHHc
Confidence 4568999999999999887767899999999999999999999999999963 2589999999 4689999999
Q ss_pred CCC------cCceEEEecCCcc
Q 009987 125 SVG------HYPMLLWGSPSKF 140 (521)
Q Consensus 125 ~I~------~yPTl~~f~~g~~ 140 (521)
+|+ ++||+++|++|+.
T Consensus 78 ~v~~~~~~~~~Pt~~~~~~G~~ 99 (137)
T 2dj0_A 78 KVSTSPLTKQLPTLILFQGGKE 99 (137)
T ss_dssp TCCCCSSSSCSSEEEEESSSSE
T ss_pred cCcccCCcCCCCEEEEEECCEE
Confidence 999 9999999988753
No 61
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.69 E-value=1e-16 Score=166.32 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=95.1
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhh------HHHHHHHHHhCCCCCCCCCeEEEEEeeccccc
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYK------PQYEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~------P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (521)
...+.|++||.++|++.|.+. +++||+|||||||||+... |.|+++|+.+++ ..|.+++|||+ +
T Consensus 10 ~~~~~v~~lt~~~f~~~i~~~--~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~------~~v~~~~Vd~~--~ 79 (367)
T 3us3_A 10 DGVDRVINVNAKNYKNVFKKY--EVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED------KGVGFGLVDSE--K 79 (367)
T ss_dssp CCCCCCEECCTTTHHHHHHHC--SEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT------TTEEEEEEETT--T
T ss_pred CCCCccEECCHHHHHHHHhhC--CeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc------CCceEEEEeCc--c
Confidence 345679999999999999764 7899999999999974333 799999999963 24999999995 6
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
++++|++|+|++|||+++|++|+. ..|.|.++.+.|++||.++++..+
T Consensus 80 ~~~l~~~~~V~~~PTl~~f~~G~~--------------~~y~G~~~~~~i~~~i~~~~~~~v 127 (367)
T 3us3_A 80 DAAVAKKLGLTEEDSIYVFKEDEV--------------IEYDGEFSADTLVEFLLDVLEDPV 127 (367)
T ss_dssp THHHHHHHTCCSTTEEEEEETTEE--------------EECCSCCSHHHHHHHHHHHHSCSE
T ss_pred cHHHHHHcCCCcCceEEEEECCcE--------------EEeCCCCCHHHHHHHHHHhcCCCc
Confidence 899999999999999999987732 358999999999999999987644
No 62
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.68 E-value=1.1e-16 Score=138.41 Aligned_cols=108 Identities=17% Similarity=0.358 Sum_probs=91.2
Q ss_pred cCcceecCcccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 45 VDHAVELNATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
...+..++.++|+..+.+. .+++++|.||++||++|+.+.|.++++++.+. + +.++.||+ +++.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~-~~~~~vd~--~~~~~~~~ 81 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP-------N-AVFLKVDV--DELKPIAE 81 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHH
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-cEEEEEEC--CCCHHHHH
Confidence 3457788999999988752 35789999999999999999999999999875 3 88999998 46889999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+|+++||+++|++|+. +..+.|.. .++|.++|++.++.
T Consensus 82 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 82 QFSVEAMPTFLFMKEGDV-------------KDRVVGAI-KEELTAKVGLHAAA 121 (122)
T ss_dssp HTTCCSSSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHHHHSC
T ss_pred HcCCCcccEEEEEeCCEE-------------EEEEeCcC-HHHHHHHHHHHhcc
Confidence 999999999999987743 34577878 99999999988753
No 63
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=2.7e-17 Score=144.63 Aligned_cols=115 Identities=19% Similarity=0.486 Sum_probs=94.3
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
....|..++.++|+..+.+ .++++||+|||+||++|+.+.|.|+++++.+.+. +.+.++.|||+ ++..++++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~-----~~~~~~~vd~~--~~~~~~~~ 76 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMD-PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ-----KDLVIAKMDAT--ANDITNDQ 76 (133)
T ss_dssp SSCSSEECCTTTCCCCCTC-TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS-----SSEEEEEECTT--TSCCCCSS
T ss_pred CCCceEEEcCCCHHHHhcc-CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC-----CCEEEEEecCC--cCHHHHhh
Confidence 4567999999999988765 3588999999999999999999999999999642 35999999994 56778899
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhcc-ccCCHHHHHHHHHHhcccC
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~~~L~~~i~~~l~~~ 177 (521)
|+|+++||+++|.+|.... ...+. |.++.++|.+||++.++..
T Consensus 77 ~~v~~~Pt~~~~~~g~~~~-----------~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 77 YKVEGFPTIYFAPSGDKKN-----------PIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp CCCSSSSEEEEECTTCTTS-----------CEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred cCCCcCCEEEEEeCCCccc-----------ceEecCCCcCHHHHHHHHHHhcccc
Confidence 9999999999998763221 12355 5589999999999998754
No 64
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.68 E-value=1.3e-16 Score=139.89 Aligned_cols=105 Identities=19% Similarity=0.361 Sum_probs=89.5
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
...+..++. ++|++.+.. +++++|.|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++
T Consensus 18 ~~mv~~l~~~~~f~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--d~~~~l~~~ 85 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIMSE--DILTVAWFTAVWCGPCKTIERPMEKIAYEFP--------TVKFAKVDA--DNNSEIVSK 85 (125)
T ss_dssp CSCCEEECCHHHHHHHHHS--SSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHH
T ss_pred ccceEECCCHHHHHHHHcc--CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--------CCEEEEEEC--CCCHHHHHH
Confidence 344889998 999999844 4789999999999999999999999999873 389999998 468899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|+++||+++|++|+. +..+.| .+.++|.++|++.++
T Consensus 86 ~~v~~~Pt~~i~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 86 CRVLQLPTFIIARSGKM-------------LGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHHH
T ss_pred cCCCcccEEEEEeCCeE-------------EEEEeC-CCHHHHHHHHHHHhc
Confidence 99999999999987743 345677 688999999988764
No 65
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.68 E-value=8e-17 Score=145.76 Aligned_cols=112 Identities=12% Similarity=0.167 Sum_probs=89.0
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcC
Q 009987 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHY 129 (521)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~y 129 (521)
..+.++|++.+....++++||+|||+||++|+.+.|.++++++++. +.+.++.||+ +++++++++|+|+++
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~-------~~~~~~~vd~--d~~~~l~~~~~v~~~ 78 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS-------KMAAIYLVDV--DQTAVYTQYFDISYI 78 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT-------TTEEEEEEET--TTCCHHHHHTTCCSS
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CcCHHHHHHcCCCcc
Confidence 3467899998874456899999999999999999999999999875 3489999998 568899999999999
Q ss_pred ceEEEecCCcccCCCCCCCccchhhhhccc-cCCHHHHHHHHHHhc
Q 009987 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQT 174 (521)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~~~L~~~i~~~l 174 (521)
||+++|++|+...-.... ..-..+.| ..+.++|.++|++.+
T Consensus 79 Pt~~~~~~G~~v~~~~g~----~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 79 PSTVFFFNGQHMKVDYGS----PDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp SEEEEEETTEEEEEECSS----SCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CeEEEEECCeEEEeecCC----CCCCeEeeecCCHHHHHHHHHHHH
Confidence 999999888644100000 00145678 889999999998765
No 66
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.68 E-value=1e-16 Score=137.90 Aligned_cols=103 Identities=17% Similarity=0.422 Sum_probs=87.9
Q ss_pred cceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 47 HAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 47 ~v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
.+.+++. ++|+..+.+..+++++|.|||+||++|+.+.|.++++++.+ .+.++.||+ +++.+++++|+
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---------~~~~~~vd~--~~~~~~~~~~~ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---------DAIFVKVDV--DKLEETARKYN 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---------SSEEEEEET--TTSHHHHHHTT
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---------CcEEEEEEC--CccHHHHHHcC
Confidence 4788888 99999998655688999999999999999999999998876 178999998 46889999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 83 v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK-------------VGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred CCccceEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHHhC
Confidence 999999999987743 345667 68899999998753
No 67
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.68 E-value=1.5e-16 Score=151.82 Aligned_cols=112 Identities=18% Similarity=0.383 Sum_probs=96.8
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.....+..+++++|+..+.. ++++||+|||+||++|+.+.|.|+++++.+. +.+.|+.||| +++.++++
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~--~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~-------~~v~~~~vd~--~~~~~l~~ 162 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNS--GELWFVNFYSPGCSHCHDLAPTWREFAKEVD-------GLLRIGAVNC--GDDRMLCR 162 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHH--SCCEEEEEECTTCHHHHHHHHHHHHHHHHTB-------TTBEEEEEET--TTCHHHHH
T ss_pred CCCCceEEecHHHHHHHHcc--CCcEEEEEeCCCChhHHHHHHHHHHHHHHhc-------CceEEEEEEC--CccHHHHH
Confidence 34556899999999999855 3789999999999999999999999999986 3589999999 46889999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
+|+|+++||+++|++|+. +..+.|.++.+.|.+||.+.++..+
T Consensus 163 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~~~~ 205 (210)
T 3apq_A 163 MKGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 205 (210)
T ss_dssp HTTCCSSSEEEEECTTSC-------------CEECCSCCCHHHHHHHHHHHHHCCS
T ss_pred HcCCCcCCeEEEEECCCc-------------eeEecCCCCHHHHHHHHHHhCcccc
Confidence 999999999999987743 3567899999999999999987543
No 68
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.68 E-value=2.1e-16 Score=138.11 Aligned_cols=109 Identities=20% Similarity=0.417 Sum_probs=90.4
Q ss_pred ccccCcceec-CcccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccH
Q 009987 42 KVEVDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINT 118 (521)
Q Consensus 42 p~~~~~v~~L-~~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~ 118 (521)
+.....+..+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++++. .+.++.||+ +++.
T Consensus 12 ~~~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--d~~~ 81 (124)
T 1xfl_A 12 ASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--------NVLFLKVDT--DELK 81 (124)
T ss_dssp CCCCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTSH
T ss_pred hcCCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CcEEEEEEC--ccCH
Confidence 3455567777 679999988752 35889999999999999999999999999874 389999998 4688
Q ss_pred HHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 119 NLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 119 ~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++++|+|+++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 82 ~l~~~~~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 82 SVASDWAIQAMPTFMFLKEGKI-------------LDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HHHHHTTCCSSSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHC
T ss_pred HHHHHcCCCccCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHhc
Confidence 9999999999999999987743 344667 58899999998765
No 69
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=6.6e-17 Score=139.55 Aligned_cols=114 Identities=18% Similarity=0.418 Sum_probs=90.1
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.+..|++++|+..+.. .+++++|+|||+||++|+.+.|.|+++++.+.+.+ ....+.++.|||+.. . +++
T Consensus 5 ~~~~v~~l~~~~f~~~v~~-~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~--~~~~v~~~~vd~~~~--~-~~~- 77 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLD-DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSE--FKDRVVIAKVDATAN--D-VPD- 77 (121)
T ss_dssp CSCSSEECCTTTTTTSSSC-TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSS--CTTSSEEEEEETTTS--C-CSS-
T ss_pred CCCCeEEecccCHHHHhhc-CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcc--cCCceEEEEEECccc--c-ccc-
Confidence 4557899999999988744 35789999999999999999999999999997421 012589999999632 2 555
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+++||+++|.+|... .+..+.|.++.++|.+||+++++.
T Consensus 78 -~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 78 -EIQGFPTIKLYPAGAKG-----------QPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp -CCSSSSEEEEECSSCTT-----------SCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred -ccCcCCeEEEEeCcCCC-----------CceEecCCCCHHHHHHHHHhccCc
Confidence 99999999999876210 134578999999999999998764
No 70
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.67 E-value=2.7e-16 Score=131.46 Aligned_cols=102 Identities=24% Similarity=0.471 Sum_probs=86.1
Q ss_pred eecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 49 VELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 49 ~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
..++. ++|++.+.+..+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~~~~v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--------EVEFAKVDV--DQNEEAAAKYSVT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHTTCC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--------CCEEEEEec--cCCHHHHHHcCCc
Confidence 45665 899999986556889999999999999999999999999874 388999998 4678999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++||+++|++|+. +..+.| .+.++|.++|++.+
T Consensus 72 ~~Pt~~~~~~g~~-------------~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 72 AMPTFVFIKDGKE-------------VDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp SSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHC
T ss_pred cccEEEEEeCCcE-------------EEEEeC-CCHHHHHHHHHhhC
Confidence 9999999987743 345667 68899999998753
No 71
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.67 E-value=1.8e-16 Score=153.31 Aligned_cols=111 Identities=24% Similarity=0.539 Sum_probs=96.0
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..+.++.|++++|+..+.+. ++++|+|||+||++|+.+.|.|+++++.+.+.+ ..+.++.||| +++.++|++
T Consensus 13 ~~~~v~~l~~~~~~~~~~~~--~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~----~~~~~~~vd~--~~~~~l~~~ 84 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVADK--DTVLLEFYAPWCGHCKQFAPEYEKIANILKDKD----PPIPVAKIDA--TSASVLASR 84 (241)
T ss_dssp EETTEEEECTTTHHHHHTTC--SEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSS----SCCCEEEEET--TTCHHHHHH
T ss_pred cCCCcEEecccCHHHHHhcC--CeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcC----CceEEEEEec--cCCHHHHHh
Confidence 34579999999999998664 789999999999999999999999999997543 3489999999 468999999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|+++||+++|++|+. + .+.|.++.++|.+++.+.+..
T Consensus 85 ~~v~~~Pt~~~~~~g~~-------------~-~~~g~~~~~~l~~~i~~~~~~ 123 (241)
T 3idv_A 85 FDVSGYPTIKILKKGQA-------------V-DYEGSRTQEEIVAKVREVSQP 123 (241)
T ss_dssp TTCCSSSEEEEEETTEE-------------E-ECCSCSCHHHHHHHHHHHHST
T ss_pred cCCCcCCEEEEEcCCCc-------------c-cccCcccHHHHHHHHhhccCc
Confidence 99999999999987632 2 478999999999999998764
No 72
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.67 E-value=2.8e-16 Score=134.19 Aligned_cols=105 Identities=19% Similarity=0.413 Sum_probs=88.7
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.++....++.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++
T Consensus 7 ~~~~~~~~~~~~f~~~~~~--~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--~~~~~~~~~ 74 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQ--NELVIVDFFAEWCGPCKRIAPFYEECSKTYT--------KMVFIKVDV--DEVSEVTEK 74 (112)
T ss_dssp --CCEEECSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTTHHHHHH
T ss_pred ceeEEEECCHHHHHHHHcc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--------CCEEEEEEC--CCCHHHHHH
Confidence 3455778999999999975 4889999999999999999999999999874 388999998 467899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+|.++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 75 ~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 75 ENITSMPTFKVYKNGSS-------------VDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TTCCSSSEEEEEETTEE-------------EEEEESC-CHHHHHHHHHTTC
T ss_pred cCCCcccEEEEEECCcE-------------EEEEeCC-CHHHHHHHHHHhh
Confidence 99999999999987743 3456787 9999999998754
No 73
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.66 E-value=1.4e-16 Score=163.89 Aligned_cols=110 Identities=18% Similarity=0.169 Sum_probs=95.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHH-------HHHHHHHhCCCCCCCCCeEEEEEeeccccc
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-------YEKVARLFNGPNAAHPGIILMTRVDCALKI 116 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~-------~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~ 116 (521)
..+.|++|+.++|++.+.+ ++++||+||||||| |++++|. |+++|+.+++ ..+.+++|||+ +
T Consensus 9 ~~~~v~~l~~~~f~~~i~~--~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~------~~v~~~~Vd~~--~ 77 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKK--YDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEH------KDIGFVMVDAK--K 77 (350)
T ss_dssp CCCCCEEECHHHHHHHHTT--CSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGG------SSEEEEEEETT--T
T ss_pred CCCccEECCHHHHHHHHhh--CCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhh------cCcEEEEEeCC--C
Confidence 3456999999999999875 37899999999999 9999999 9999999863 24999999994 5
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
+.++|++|+|++|||+++|++|+ +..|.|.++.+.|.+|+.++++..+
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~g~--------------~~~~~G~~~~~~l~~~i~~~~~~~~ 125 (350)
T 1sji_A 78 EAKLAKKLGFDEEGSLYVLKGDR--------------TIEFDGEFAADVLVEFLLDLIEDPV 125 (350)
T ss_dssp THHHHHHHTCCSTTEEEEEETTE--------------EEEECSCCCHHHHHHHHHTTSSCSE
T ss_pred CHHHHHhcCCCccceEEEEECCc--------------EEEecCCCCHHHHHHHHHHhcCCcc
Confidence 78999999999999999998773 2468899999999999999887543
No 74
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.66 E-value=4.1e-17 Score=142.66 Aligned_cols=106 Identities=18% Similarity=0.401 Sum_probs=86.1
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh--------------hHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEee
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP--------------ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD 111 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg--------------~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD 111 (521)
+.+++++.++|+..+.+. +++++|+|||+||+ +|+.+.|.++++++.+. +.+.++.||
T Consensus 3 ~~v~~l~~~~f~~~~~~~-~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~-------~~~~~~~vd 74 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ-------GKLTVAKLN 74 (123)
T ss_dssp CSCEECCSTTHHHHTTSC-SSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------------CEEEEEE
T ss_pred CccEecChhhHHHHHHhC-CCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc-------CCeEEEEEE
Confidence 458899999999877543 58899999999999 99999999999999875 358999999
Q ss_pred ccccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 112 CALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 112 c~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+ +++.+++++|+|+++||+++|++|+. +..+.|..+.++|.++|++.+
T Consensus 75 ~--d~~~~l~~~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 75 I--DQNPGTAPKYGIRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp T--TSCTTTGGGGTCCBSSEEEEEESSSE-------------EEEEESCCCHHHHHHHHTTTC
T ss_pred C--CCCHHHHHHcCCCccCEEEEEECCEE-------------EEEEeCCCCHHHHHHHHHHHh
Confidence 8 46788999999999999999987743 345789999999999998765
No 75
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.66 E-value=1.2e-16 Score=140.01 Aligned_cols=86 Identities=27% Similarity=0.524 Sum_probs=76.6
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGS 144 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~ 144 (521)
+++++|+|||+||++|+++.|.++++++.+. +.+.++.||+ +++.+++++|+|+++||+++|++|+
T Consensus 42 ~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~vd~--d~~~~l~~~~~v~~~Pt~~~~~~G~----- 107 (128)
T 3ul3_B 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYG-------KRIYLLKVDL--DKNESLARKFSVKSLPTIILLKNKT----- 107 (128)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHG-------GGEEEEEEEG--GGCHHHHHHTTCCSSSEEEEEETTE-----
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhc-------CCeEEEEEEC--CCCHHHHHHcCCCCcCEEEEEECCE-----
Confidence 5889999999999999999999999999986 4599999998 5688999999999999999998774
Q ss_pred CCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 145 WEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 145 ~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
.+.++.|..+.++|.++|++
T Consensus 108 --------~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 108 --------MLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp --------EEEEESSCCCHHHHHHHHTT
T ss_pred --------EEEEecCCCCHHHHHHHHHh
Confidence 34567899999999999865
No 76
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.66 E-value=1.8e-16 Score=169.72 Aligned_cols=110 Identities=36% Similarity=0.673 Sum_probs=96.4
Q ss_pred cceecCcccHHHHHhcC-CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 47 HAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~-~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
.|++||.++|++.+.+. .+++++|+||||||+||+++.|.|+++|+.+. +.+.++.|||+ ++.++|++|+
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~~~~ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLK-------GIVPLAKVDCT--ANTNTCNKYG 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCCEEEEETT--TCHHHHHHTT
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhc-------CceEEEEEECC--CCHHHHHhcC
Confidence 48899999999999653 23789999999999999999999999999996 34889999994 6899999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|++|||+++|++|+ .+..|.|.++.+.|.+|+.++++..+
T Consensus 73 v~~~Ptl~~~~~g~-------------~~~~~~G~~~~~~l~~~~~~~~~~~~ 112 (481)
T 3f8u_A 73 VSGYPTLKIFRDGE-------------EAGAYDGPRTADGIVSHLKKQAGPAS 112 (481)
T ss_dssp CCEESEEEEEETTE-------------EEEECCSCSSHHHHHHHHHHHTSCSE
T ss_pred CCCCCEEEEEeCCc-------------eeeeecCccCHHHHHHHHHhhcccCc
Confidence 99999999998873 23568999999999999999987654
No 77
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.66 E-value=2.1e-16 Score=152.26 Aligned_cols=112 Identities=18% Similarity=0.373 Sum_probs=96.5
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.....+..+|.++|++.+.+. +++++|+|||+||++|+.+.|.|+++++.+. +.+.++.||+ +++.++++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~-~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~--d~~~~l~~ 78 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKA-DGAILVDFWAEWCGPCKMIAPILDEIADEYQ-------GKLTVAKLNI--DQNPGTAP 78 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTCEEEEEET--TTCTTTGG
T ss_pred CCCCCceeCCHHHHHHHHHhc-CCEEEEEEECCcCHHHHHHHHHHHHHHHHhc-------CCcEEEEEEC--CCCHHHHH
Confidence 345678999999999976553 4789999999999999999999999999986 3489999999 46788999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+|+|+++||+++|++|+. +..+.|..+.+.|.++|++.+...
T Consensus 79 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 79 KYGIRGIPTLLLFKNGEV-------------AATKVGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp GGTCCSBSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHSCCS
T ss_pred HcCCCcCCEEEEEECCeE-------------EEEeccccChHHHHHHHHhhcccc
Confidence 999999999999987743 346789999999999999998654
No 78
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.66 E-value=1.7e-16 Score=140.51 Aligned_cols=109 Identities=17% Similarity=0.344 Sum_probs=89.4
Q ss_pred cCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 45 VDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
...+++++. ++|+..+.+.+++++||+|||+||++|+.+.|.++++++.+ .+.++.||+ +++.+++++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---------~v~~~~vd~--~~~~~l~~~ 87 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---------YVTLVDIDV--DIHPKLNDQ 87 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---------ECEEEEEET--TTCHHHHHH
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---------CEEEEEEec--cchHHHHHh
Confidence 345778875 89999998877789999999999999999999999988765 278999998 468999999
Q ss_pred CCCCcCceEEEec--CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWGS--PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f~--~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|+++||+++|. +|+. ..+..+.|. +.++|.++|++.+..
T Consensus 88 ~~v~~~Pt~~~~~~~~g~g-----------~~~~~~~G~-~~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 88 HNIKALPTFEFYFNLNNEW-----------VLVHTVEGA-NQNDIEKAFQKYCLE 130 (133)
T ss_dssp TTCCSSSEEEEEEEETTEE-----------EEEEEEESC-CHHHHHHHHHHHSEE
T ss_pred cCCCCCCEEEEEEecCCCe-----------EEEEEEcCC-CHHHHHHHHHHHHHh
Confidence 9999999999985 6531 133456776 899999999988753
No 79
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.66 E-value=3.8e-16 Score=141.51 Aligned_cols=108 Identities=20% Similarity=0.401 Sum_probs=91.0
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
..+..++ .++|+..+.+.+++++||+||++||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--------~v~~~~vd~--~~~~~l~~~~ 81 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--------QVSFVKLEA--EGVPEVSEKY 81 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHHHT
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--------CeEEEEEEC--CCCHHHHHHc
Confidence 3477776 5999999987656889999999999999999999999999863 389999998 4688999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+|+++||+++|.+|+. +..+.| .+.++|.++|++.++..
T Consensus 82 ~v~~~Pt~~~~~~G~~-------------~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 82 EISSVPTFLFFKNSQK-------------IDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp TCCSSSEEEEEETTEE-------------EEEEES-SCHHHHHHHHHHHSCTT
T ss_pred CCCCCCEEEEEECCEE-------------EEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999999999987743 244566 57889999999988653
No 80
>3td7_A FAD-linked sulfhydryl oxidase R596; four helix-bundle, orfan domain, oxidoreductase; HET: FAD; 2.21A {Acanthamoeba polyphaga mimivirus}
Probab=99.66 E-value=8.4e-17 Score=155.82 Aligned_cols=77 Identities=14% Similarity=0.353 Sum_probs=70.5
Q ss_pred cHHHHHHHHhhcCCCCCCHHHHHHHHHHHHh---ccCChHHHHHHHHHHhcCC-----CCCCChhHHHHHHHHhhhhhhh
Q 009987 315 GLWVLLHSLSVRIDDGESQFTFTAVCDFIHN---FFVCEECRQHFYQMCSSVT-----SPFNKTRDFALWLWSTHNQVNE 386 (521)
Q Consensus 315 glW~lfH~ltv~~~~~~~~~~~~~~~~~v~~---Ff~C~~C~~hf~~~~~~~~-----~~~~~~~~~~lWlw~~HN~VN~ 386 (521)
++|++||+||++||+.|+......+++||.+ |+||.+||+||.+++.+.+ +.++|+++++.|||.+||.||+
T Consensus 46 stW~fLHTIAa~YPenPT~~dKk~y~~FI~nL~~vLPC~~Cr~HF~k~Lkk~Pv~~~~p~L~SRdsLskWL~~iHN~VNk 125 (295)
T 3td7_A 46 AGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNN 125 (295)
T ss_dssp HHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHTTSGGGCCCTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999994 7999999999999988654 3478999999999999999999
Q ss_pred hcccc
Q 009987 387 RLMKL 391 (521)
Q Consensus 387 rl~~~ 391 (521)
||+++
T Consensus 126 rLGKP 130 (295)
T 3td7_A 126 KLEVD 130 (295)
T ss_dssp HHTCC
T ss_pred HhCCC
Confidence 99995
No 81
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.65 E-value=3.5e-16 Score=139.20 Aligned_cols=106 Identities=22% Similarity=0.371 Sum_probs=78.4
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
..+.+++.++|+..+.+.. + ++|.||++||++|+.+.|.++++++.+. +.+.|+.||+ +++.+++++|+
T Consensus 33 ~~v~~l~~~~~~~~~~~~~-~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~-------~~v~~~~vd~--~~~~~l~~~~~ 101 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAP-L-TLVDFFAPWCGPCRLVSPILEELARDHA-------GRLKVVKVNV--DEHPGLAARYG 101 (140)
T ss_dssp ----------------CCC-E-EEEEEECTTCHHHHHHHHHHHHHHHHTT-------TTEEEEEEET--TTCHHHHHHTT
T ss_pred CccccCCHHHHHHHHHcCC-C-EEEEEECCCCHHHHHHHHHHHHHHHHcc-------CceEEEEEEC--CCCHHHHHHCC
Confidence 5688999999999887653 4 8999999999999999999999999985 3599999998 46889999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+++||+++|++|+. +..+.|..+.++|.+||++.++
T Consensus 102 v~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 102 VRSVPTLVLFRRGAP-------------VATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred CCccCEEEEEeCCcE-------------EEEEeCCCCHHHHHHHHHHHHc
Confidence 999999999987743 3457888999999999998875
No 82
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.65 E-value=1.4e-16 Score=141.22 Aligned_cols=106 Identities=12% Similarity=0.167 Sum_probs=90.3
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------ccc
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------KIN 117 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------d~~ 117 (521)
...+..++.++|++.+.+ +++|+|||+||++|+.+.|.++++++.+. +.|+.||++. +++
T Consensus 15 ~~~v~~l~~~~~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---------v~~~~vd~~~~~~~~~~d~~ 81 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD---------VPIVMFIWGSLIGERELSAA 81 (135)
T ss_dssp TTEEEECCHHHHHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC---------SCEEEEEECTTCCHHHHHHH
T ss_pred cCceeecCHHHHHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC---------CEEEEEECCCchhhhhhhhh
Confidence 456889999999999865 78999999999999999999999998762 7788999832 467
Q ss_pred HHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 118 ~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
.+++++|+|+++||+++|.+|+. +.++.|..+.+.+.+++++.++.
T Consensus 82 ~~l~~~~~v~~~Pt~~~~~~G~~-------------v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 82 RLEMNKAGVEGTPTLVFYKEGRI-------------VDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHHHTCCSSSEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHC--
T ss_pred HHHHHHcCCceeCeEEEEcCCEE-------------EEEEeCCCCHHHHHHHHHHHhCC
Confidence 89999999999999999988743 35678999999999999988764
No 83
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.65 E-value=7e-16 Score=149.16 Aligned_cols=112 Identities=27% Similarity=0.519 Sum_probs=96.3
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.+..+..++.++|+..+.+. ++++|.|||+||++|+.+.|.|+++++.+.+.. ..+.++.|||+ ++.+++++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~----~~v~~~~vd~~--~~~~l~~~ 199 (241)
T 3idv_A 128 PPEVTLVLTKENFDEVVNDA--DIILVEFYAPWCGHCKKLAPEYEKAAKELSKRS----PPIPLAKVDAT--AETDLAKR 199 (241)
T ss_dssp CCCSSEECCTTTHHHHHHHC--SEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSS----SCCCEEEEETT--TCHHHHHH
T ss_pred ccccceeccHHHHHHhhccC--CeEEEEEECCCCHHHHHhHHHHHHHHHHHhccC----CcEEEEEEECC--CCHHHHHH
Confidence 34568889999999999764 789999999999999999999999999997532 34899999994 67899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
|+|+++||+++|++|+. + .|.|.++.++|.+||.+++++.
T Consensus 200 ~~v~~~Pt~~~~~~g~~-------------~-~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 200 FDVSGYPTLKIFRKGRP-------------Y-DYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp TTCCSSSEEEEEETTEE-------------E-ECCSCCSHHHHHHHHHHHTTCT
T ss_pred cCCcccCEEEEEECCeE-------------E-EecCCCCHHHHHHHHHhhhCCC
Confidence 99999999999987742 2 3789999999999999998753
No 84
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.64 E-value=3.5e-16 Score=134.87 Aligned_cols=103 Identities=10% Similarity=0.102 Sum_probs=82.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--cccHHHHHhC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKF 124 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--d~~~~l~~~f 124 (521)
.+..++.++|+..+.+. ++++|.|||+|||+|+.+.|.++++++.+. ..+.++.+|... +.+.+++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~--~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~-------~~v~~~~~~~~~~~~~~~~~~~~~ 83 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKK--ETATFFIGRKTCPYCRKFAGTLSGVVAETK-------AHIYFINSEEPSQLNDLQAFRSRY 83 (118)
T ss_dssp TSEECCHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHHHHC-------CCCEEEETTCGGGHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHhCC--CeEEEEEECCCCccHHHHHHHHHHHHHhcC-------CeEEEEECCCcCcHHHHHHHHHHc
Confidence 47788999999988764 679999999999999999999999999875 235555333211 3456899999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHH
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~ 171 (521)
+|+++||+++|++|+. +.++.|..+.++|.+||+
T Consensus 84 ~i~~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 84 GIPTVPGFVHITDGQI-------------NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp TCCSSCEEEEEETTEE-------------EEECCTTCCHHHHHHHHT
T ss_pred CCCCCCeEEEEECCEE-------------EEEecCCCCHHHHHHHhh
Confidence 9999999999987743 345788899999999885
No 85
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.64 E-value=3.6e-16 Score=133.44 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=84.9
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+..++.++| +.+.+. ++++|.|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|+
T Consensus 5 ~~~~~~~~f-~~~~~~--~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--------~v~~~~vd~--~~~~~l~~~~~v~ 71 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGL--SDAIVFFHKNLCPHCKNMEKVLDKFGARAP--------QVAISSVDS--EARPELMKELGFE 71 (110)
T ss_dssp SBCGGGCSH-HHHTTC--SEEEEEEECSSCSTHHHHHHHHHHHHTTCT--------TSCEEEEEG--GGCHHHHHHTTCC
T ss_pred eecCCHHHH-HHHHcC--CCEEEEEECCCCHhHHHHHHHHHHHHHHCC--------CcEEEEEcC--cCCHHHHHHcCCc
Confidence 456788999 666543 789999999999999999999999988763 378999998 4689999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
++||+++|++|+. +.++.|..+.++|.+++.+..+.
T Consensus 72 ~~Pt~~~~~~G~~-------------v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 72 RVPTLVFIRDGKV-------------AKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp SSCEEEEEESSSE-------------EEEEESCCCHHHHHHHHHTC---
T ss_pred ccCEEEEEECCEE-------------EEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999999987743 35678889999999999877543
No 86
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.64 E-value=6e-16 Score=133.20 Aligned_cols=103 Identities=17% Similarity=0.445 Sum_probs=83.9
Q ss_pred ccCcceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 44 EVDHAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 44 ~~~~v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
+...+..+++ ++|++.+.+ +++++|.|||+||++|+.+.|.++++++++. + +.++.||+ +++.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~--~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~-------~-v~~~~vd~--~~~~~l~~ 77 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQ--NDKLVIDFYATWCGPCKMMQPHLTKLIQAYP-------D-VRFVKCDV--DESPDIAK 77 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHTHHHHHHHHHHCT-------T-SEEEEEET--TTCHHHHH
T ss_pred chhheeecCCHHHHHHHHhC--CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-------C-CEEEEEEC--CCCHHHHH
Confidence 3444555554 667777765 3789999999999999999999999999874 3 88999998 46789999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
+|+|+++||+++|++|+. +..+.|.. .+.|.++|++
T Consensus 78 ~~~v~~~Pt~~~~~~G~~-------------~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 78 ECEVTAMPTFVLGKDGQL-------------IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HTTCCSBSEEEEEETTEE-------------EEEEESSC-HHHHHHHHHT
T ss_pred HCCCCcccEEEEEeCCeE-------------EEEEeCCC-HHHHHHHHHh
Confidence 999999999999987743 34567877 8899998864
No 87
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.63 E-value=5.2e-16 Score=135.25 Aligned_cols=109 Identities=12% Similarity=0.187 Sum_probs=85.6
Q ss_pred ceecCcccHHH---HHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 48 AVELNATNFDA---VLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 48 v~~L~~~~f~~---~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
+..++.++|+. ......+++++|+|||+||++|+.+.|.++++++.+. +.+.++.||++.+++.+++++|
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-------~~v~~~~v~~~~d~~~~~~~~~ 78 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-------GKFNIYYARLEEEKNIDLAYKY 78 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-------SSCEEEEEETTSSHHHHHHHHT
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-------CCeEEEEEeCCCCchHHHHHHc
Confidence 44555555551 1122335789999999999999999999999999985 3489999992225688999999
Q ss_pred CCCcCceEEEec-CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 125 SVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~~yPTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|.++||+++|. +|+. +..+.|..+.++|.++|++.++.
T Consensus 79 ~v~~~Pt~~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 79 DANIVPTTVFLDKEGNK-------------FYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp TCCSSSEEEEECTTCCE-------------EEEEESCCCHHHHHHHHHHHCCC
T ss_pred CCcceeEEEEECCCCCE-------------EEEecCCCCHHHHHHHHHHHhcc
Confidence 999999999997 6633 34577889999999999998764
No 88
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.63 E-value=5.1e-16 Score=139.27 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=85.0
Q ss_pred CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCce
Q 009987 52 NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPM 131 (521)
Q Consensus 52 ~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPT 131 (521)
+.++|+..+.+..+++++|+|||+||++|+.+.|.++++++++. +.+.++.||++ ++.+++++|+|+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-------~~v~~~~vd~d--~~~~~~~~~~i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK-------NFAVIYLVDIT--EVPDFNKMYELYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT-------TTEEEEEEETT--TCCTTTTSSCSCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC-------CCeEEEEEccc--cCHHHHHHcCCCCCCE
Confidence 57889987765345899999999999999999999999999985 35999999984 6788999999999999
Q ss_pred EEEecCCcccCCCCCCCccchhhhhccccCC-HHHHHHHHHHhcc
Q 009987 132 LLWGSPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQTS 175 (521)
Q Consensus 132 l~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~-~~~L~~~i~~~l~ 175 (521)
+++|.+|+........ .....+.|..+ .++|.++|++.+.
T Consensus 81 ~~~~~~G~~v~~~~g~----~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLGT----GNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp EEEEETTEEEEEECC----------CCSCCSCHHHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecCC----CCcceeeeecCcHHHHHHHHHHHHH
Confidence 9999888654210000 00113456554 8999999987664
No 89
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.63 E-value=6.1e-16 Score=134.57 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=81.9
Q ss_pred cceecCcccHHHHHhcCC-CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 47 HAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~-~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
.+.+++.++|.+.+.+.. +++++|+|||+||++|+.+.|.++++|+++. .+.|++||++ +. ..+|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~--------~v~f~kvd~d--~~---~~~~~ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP--------ETKFVKAIVN--SC---IQHYH 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT--------TSEEEEEEGG--GT---STTCC
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC--------CCEEEEEEhH--Hh---HHHCC
Confidence 477889999999887653 4589999999999999999999999999974 3899999984 33 58999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhcc-ccCCHHHHHHHHHH
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINK 172 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~~~L~~~i~~ 172 (521)
|+++||+++|++|+....- ....... ...+.++|..+|.+
T Consensus 71 v~~~PT~~~fk~G~~v~~~-------~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 71 DNCLPTIFVYKNGQIEAKF-------IGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp GGGCSEEEEEETTEEEEEE-------ESTTTTTCSSCCHHHHHHHHHT
T ss_pred CCCCCEEEEEECCEEEEEE-------eChhhhCCCCCCHHHHHHHHHH
Confidence 9999999999998654310 0001111 13578888888865
No 90
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.62 E-value=4.7e-16 Score=139.78 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=77.3
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCC--ChhHhhhhHHHHHHHHHhCCCCCCCCCeEE--EEEeeccccccHHHHH
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGIIL--MTRVDCALKINTNLCD 122 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~W--Cg~C~~~~P~~~~lA~~~~~~~~~~~~~v~--~~~VDc~~d~~~~l~~ 122 (521)
.+..++.++|++.+.+. +.++|.||++| |++|+.++|.|+++++++ + .+. |++||+ ++++++++
T Consensus 18 ~~~~l~~~~f~~~i~~~--~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-------~v~~~~~~Vd~--d~~~~la~ 85 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV--GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-------QFDWQVAVADL--EQSEAIGD 85 (142)
T ss_dssp TCEECCCC--------C--CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-------TSCCEEEEECH--HHHHHHHH
T ss_pred cCcccccccHHHHHHhC--CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-------ccceeEEEEEC--CCCHHHHH
Confidence 57889999999998764 34789999988 999999999999999987 3 266 999998 56899999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
+|+|+++||+++|++|+. +.++.|.++.++|.++|++.++...
T Consensus 86 ~~~V~~iPT~~~fk~G~~-------------v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 86 RFNVRRFPATLVFTDGKL-------------RGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp TTTCCSSSEEEEESCC-----------------CEESCCCHHHHHHHHHHHHC---
T ss_pred hcCCCcCCeEEEEeCCEE-------------EEEEeCCCCHHHHHHHHHHHhcccc
Confidence 999999999999988743 3567899999999999999886543
No 91
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.62 E-value=1.1e-15 Score=135.64 Aligned_cols=108 Identities=13% Similarity=0.267 Sum_probs=88.8
Q ss_pred cCcceecC-cccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH
Q 009987 45 VDHAVELN-ATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (521)
Q Consensus 45 ~~~v~~L~-~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (521)
...++.++ .++|++.+... .+++++|.|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~v~~--~~~~~~~ 92 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--------SLMFLVIDV--DELSDFS 92 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHH
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CCEEEEEeC--cccHHHH
Confidence 44566664 79999987532 35789999999999999999999999999873 388999998 4689999
Q ss_pred HhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 122 ~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
++|+|+++||+++|++|+. +..+.|. +.++|.++|++.++.
T Consensus 93 ~~~~v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 93 ASWEIKATPTFFFLRDGQQ-------------VDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp HHTTCCEESEEEEEETTEE-------------EEEEESC-CHHHHHHHHHHHHHT
T ss_pred HHcCCCcccEEEEEcCCeE-------------EEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999999999999987743 3456676 889999999988753
No 92
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.61 E-value=2.8e-15 Score=146.83 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=92.0
Q ss_pred CccccCcceecCcccHHHHHhcCCCCeEEEEEe--cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---c
Q 009987 41 KKVEVDHAVELNATNFDAVLRDTPATYAVVEFF--ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---K 115 (521)
Q Consensus 41 ~p~~~~~v~~L~~~~f~~~l~~~~~~~vlV~Fy--A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d 115 (521)
.|.....++.||+++|++++.. ++++||+|| ||||| +.|.|+++|+.+.++. +.|.|+.|||+. +
T Consensus 11 ~~~~~~~v~~Lt~~nF~~vi~~--~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~----~~v~~akVD~d~~g~~ 80 (248)
T 2c0g_A 11 GSVTCTGCVDLDELSFEKTVER--FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKAT----KDLLIATVGVKDYGEL 80 (248)
T ss_dssp ----CTTCEECCTTTHHHHHTT--SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHC----SSEEEEEEEECSSTTC
T ss_pred CCCCCCCcEECCHHHHHHHHhc--CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccC----CCeEEEEEECCccccc
Confidence 4556677999999999997744 378999999 99999 9999999999985311 359999999963 1
Q ss_pred ccHHHHHhCCCC--cCceEEEecCCcccCCCCCCCccchhhhhc--cccCCHHHHHHHHHHhcccC
Q 009987 116 INTNLCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL--EDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 116 ~~~~l~~~f~I~--~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~--~G~~~~~~L~~~i~~~l~~~ 177 (521)
+++++|++|+|+ +|||+++|+ |+.. ....| .|.++.+.|.+||+++++..
T Consensus 81 ~n~~la~~~~V~~~~~PTl~~F~-G~~~-----------~~~~y~~~G~~~~~~L~~fi~~~~~~~ 134 (248)
T 2c0g_A 81 ENKALGDRYKVDDKNFPSIFLFK-GNAD-----------EYVQLPSHVDVTLDNLKAFVSANTPLY 134 (248)
T ss_dssp TTHHHHHHTTCCTTSCCEEEEES-SSSS-----------SEEECCTTSCCCHHHHHHHHHHHSSCC
T ss_pred ccHHHHHHhCCCcCCCCeEEEEe-CCcC-----------cceeecccCCCCHHHHHHHHHHhhccc
Confidence 289999999999 999999998 8421 12456 89999999999999998743
No 93
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.61 E-value=1.6e-15 Score=129.96 Aligned_cols=107 Identities=18% Similarity=0.391 Sum_probs=88.1
Q ss_pred Ccceec-CcccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 46 DHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
..++.+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.++++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~--~~~~~~~~ 75 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--------GAIFLKVDV--DELKDVAE 75 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTSHHHHH
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--------CcEEEEEEc--ccCHHHHH
Confidence 346667 579999988652 24789999999999999999999999999874 388999998 46889999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+|+++||+++|++|+. +..+.| .+.++|.++|.+.++.
T Consensus 76 ~~~v~~~Pt~~~~~~g~~-------------~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 76 AYNVEAMPTFLFIKDGEK-------------VDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp HTTCCSBSEEEEEETTEE-------------EEEEES-CCHHHHHHHHHHHHC-
T ss_pred HcCCCcCcEEEEEeCCeE-------------EEEecC-CCHHHHHHHHHHHhcc
Confidence 999999999999987743 344566 5889999999988753
No 94
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=2.7e-15 Score=133.18 Aligned_cols=104 Identities=9% Similarity=0.137 Sum_probs=84.5
Q ss_pred cCcceecCcccHHHHHhcC-CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 45 VDHAVELNATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~-~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
...+.+++.++|++.+.+. .++++||+|||+||++|+.+.|.++++++++. .+.|+.||++. +. ++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--------~v~~~~vd~~~--~~---~~ 75 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--------ETKFVKAIVNS--CI---EH 75 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--------SEEEEEECCSS--SC---SS
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CcEEEEEEhhc--Cc---cc
Confidence 3458888999999988764 34789999999999999999999999999873 38999999853 22 78
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhcccc-------CCHHHHHHHHHHhc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-------QTADGLLTWINKQT 174 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~-------~~~~~L~~~i~~~l 174 (521)
|+|+++||+++|.+|+.. .++.|. .+.++|.++|.++-
T Consensus 76 ~~i~~~Pt~~~~~~G~~v-------------~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 76 YHDNCLPTIFVYKNGQIE-------------GKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp CCSSCCSEEEEESSSSCS-------------EEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 999999999999888543 233343 37899999998863
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.61 E-value=1.6e-15 Score=128.88 Aligned_cols=105 Identities=20% Similarity=0.471 Sum_probs=87.2
Q ss_pred cceec-CcccHHHHHhc--CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 47 HAVEL-NATNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 47 ~v~~L-~~~~f~~~l~~--~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
.++.+ +.++|++.+.. ..+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~~~ 74 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--------NVTFLKVDV--DELKAVAEE 74 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--------SEEEEEEET--TTCHHHHHH
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--------CcEEEEEEc--cccHHHHHh
Confidence 46666 67899998865 235889999999999999999999999999874 389999998 468899999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|.++||+++|++|+. +..+.| .+.++|.++|++.+.
T Consensus 75 ~~v~~~Pt~~~~~~G~~-------------~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 75 WNVEAMPTFIFLKDGKL-------------VDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHCSSTTEEEEEETTEE-------------EEEEEC-CCTTHHHHHHHHHHH
T ss_pred CCCCcccEEEEEeCCEE-------------EEEEec-CCHHHHHHHHHHhhc
Confidence 99999999999987743 234566 688899999988753
No 96
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=1.3e-15 Score=133.14 Aligned_cols=109 Identities=22% Similarity=0.385 Sum_probs=88.5
Q ss_pred ceecCcccHHHHHhc--CCCCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 48 AVELNATNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 48 v~~L~~~~f~~~l~~--~~~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.+.++..+|++.+.. ..++++||+||++||++|+.+.|.+ +++++.+. ..+.++.||++.+.+..+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~ 80 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN-------RHFVNLKMDMEKGEGVELRK 80 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH-------HHSEEEEECSSSTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh-------cCeEEEEEecCCcchHHHHH
Confidence 456678899887742 1347899999999999999999999 77777664 35788999996556889999
Q ss_pred hCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+|.++||+++| ++|+. +..+.|..+.++|.++|++.++.
T Consensus 81 ~~~v~~~Pt~~~~d~~G~~-------------~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 81 KYGVHAYPTLLFINSSGEV-------------VYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HTTCCSSCEEEEECTTSCE-------------EEEEESCCCHHHHHHHHHHHHSC
T ss_pred HcCCCCCCEEEEECCCCcE-------------EEEecCCCCHHHHHHHHHHHHHh
Confidence 9999999999998 56633 34577889999999999998764
No 97
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.60 E-value=1.4e-15 Score=131.93 Aligned_cols=104 Identities=17% Similarity=0.386 Sum_probs=85.7
Q ss_pred cceecCc-ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 47 HAVELNA-TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 47 ~v~~L~~-~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
.+..++. ++|++.+.. +++++|.||++||++|+.+.|.++++++.+.+ ..+.++.||+ +++.+++++|+
T Consensus 16 ~~~~i~~~~~f~~~l~~--~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~v~~~~vd~--d~~~~~~~~~~ 85 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGG--DKVVVIDFWATWCGPCKMIGPVFEKISDTPAG------DKVGFYKVDV--DEQSQIAQEVG 85 (121)
T ss_dssp CEEECCSHHHHHHHHSS--SSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH------HHSEEEEEET--TTCHHHHHHHT
T ss_pred ceEEcCCHHHHHHHHcC--CCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC------CcEEEEEEEC--cCCHHHHHHcC
Confidence 4555554 899998843 47899999999999999999999999987752 1289999998 46889999999
Q ss_pred CCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 126 VGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 126 I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|.++||+++|++|+. +..+.|. +.++|.++|++.+
T Consensus 86 v~~~Pt~~~~~~G~~-------------~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 86 IRAMPTFVFFKNGQK-------------IDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp CCSSSEEEEEETTEE-------------EEEEESS-CHHHHHHHHHHHT
T ss_pred CCcccEEEEEECCeE-------------EeeEcCC-CHHHHHHHHHHhh
Confidence 999999999987743 3456777 8999999998765
No 98
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.60 E-value=2.2e-15 Score=155.23 Aligned_cols=111 Identities=21% Similarity=0.425 Sum_probs=92.2
Q ss_pred ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 44 EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 44 ~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
....+..|++++|+..+.+. +++++|+|||||||||+++.|.|+++++.+++. ..+.++.|||+.+. +++
T Consensus 247 ~~~~v~~l~~~~f~~~~~~~-~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~-----~~v~~~~vd~~~~~----~~~ 316 (361)
T 3uem_A 247 DKQPVKVLVGKNFEDVAFDE-KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDH-----ENIVIAKMDSTANE----VEA 316 (361)
T ss_dssp TTSSSEEECTTTHHHHHTCT-TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEETTTCB----CSS
T ss_pred ccCCcEEeecCchhhhcccC-CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccC-----CcEEEEEEECCccc----hhh
Confidence 34569999999999988654 478999999999999999999999999999743 35999999996432 789
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|++|||+++|++|.- ..+..|.|.++.++|.+||+++..
T Consensus 317 ~~v~~~Pt~~~~~~~~~-----------~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 317 VKVHSFPTLKFFPASAD-----------RTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp CCCCSSSEEEEECSSSS-----------CCCEECCSCSSHHHHHHHHTTTSC
T ss_pred cCCcccCeEEEEECCCC-----------cceeEecCCCCHHHHHHHHHhcCC
Confidence 99999999999976511 234568899999999999987653
No 99
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.60 E-value=3.4e-15 Score=132.06 Aligned_cols=107 Identities=11% Similarity=0.315 Sum_probs=86.9
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccc--cccHHHHHhC
Q 009987 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL--KINTNLCDKF 124 (521)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~--d~~~~l~~~f 124 (521)
..+.++|+..+.+.+++++||+|||+||++|+.+.|.+ .++++.+. + +.++.||++. +.+.+++++|
T Consensus 16 ~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~-------~-~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 16 IKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA-------D-TVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp CCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT-------T-SEEEEEECTTCCHHHHHHHHHT
T ss_pred ecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------C-cEEEEEeCCCCcchHHHHHHHc
Confidence 44567888888765568999999999999999999999 99998874 2 8899999854 4678999999
Q ss_pred CCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 125 SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|.++||+++| ++|+... ..++.|..+.++|.++|++.-+
T Consensus 88 ~v~~~Pt~~~~d~~G~~v~-----------~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 88 NVLGLPTILFFDGQGQEHP-----------QARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp TCCSSSEEEEECTTSCBCG-----------GGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCCCEEEEECCCCCEee-----------eeeeeeccCHHHHHHHHHhcCc
Confidence 99999999999 6664321 1457899999999999987644
No 100
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.58 E-value=3.5e-15 Score=129.03 Aligned_cols=109 Identities=19% Similarity=0.340 Sum_probs=83.6
Q ss_pred cceec--CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 47 HAVEL--NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 47 ~v~~L--~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+..+ +.++|++.+.+. ++++||.|||+||++|+.+.|.++++++.+. .+.|+.||+ +++.+++++|
T Consensus 4 ~v~~~~g~~~~~~~~~~~~-~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~--------~v~~~~vd~--~~~~~~~~~~ 72 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEA-PGLVLVDFFATWCGPCQRLGQILPSIAEANK--------DVTFIKVDV--DKNGNAADAY 72 (118)
T ss_dssp CSEEECSCHHHHHHHHHHC-SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEET--TTCHHHHHHT
T ss_pred cceEecCCHHHHHHHHHhC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--------CeEEEEEEC--CCCHHHHHhc
Confidence 46666 578898766543 4789999999999999999999999999872 389999998 4688999999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|+++||+++|.++. . ++..+.++.|.. .++|.+.+.++...
T Consensus 73 ~i~~~Pt~~~~~~~~-~--------~G~~~~~~~G~~-~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 73 GVSSIPALFFVKKEG-N--------EIKTLDQFVGAD-VSRIKADIEKFKHH 114 (118)
T ss_dssp TCCSSSEEEEEEEET-T--------EEEEEEEEESCC-HHHHHHHHHHHC--
T ss_pred CCCCCCEEEEEeCCC-C--------cceEEEeecCCC-HHHHHHHHHHhhhc
Confidence 999999999987510 0 113345567755 45699999887653
No 101
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.58 E-value=5.9e-15 Score=157.98 Aligned_cols=125 Identities=16% Similarity=0.432 Sum_probs=101.3
Q ss_pred cCCCCcc-ccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc
Q 009987 37 GDTEKKV-EVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK 115 (521)
Q Consensus 37 ~~~~~p~-~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d 115 (521)
.+++.|. ....+..+++++|+..+.+. ++++||+|||+|||||+.++|.|+++++.+.+. ..+.++.||++
T Consensus 342 ~s~~~p~~~~~~v~~~~~~~~~~~~~~~-~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~-----~~v~~~~id~~-- 413 (481)
T 3f8u_A 342 KSEPIPESNDGPVKVVVAENFDEIVNNE-NKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD-----PNIVIAKMDAT-- 413 (481)
T ss_dssp CCCCCCSCCCSSSEEECTTTHHHHHTCT-TCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC-----SSEEEEEEETT--
T ss_pred ccCCCCCCCCCCeEEecccCHHHHhhcC-CCcEEEEEecCcChhHHHhhHHHHHHHHHhccC-----CCEEEEEEECC--
Confidence 3444443 34568899999999998763 588999999999999999999999999999743 35999999985
Q ss_pred ccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCcCCC
Q 009987 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSYGLD 181 (521)
Q Consensus 116 ~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~~l~ 181 (521)
.+ +++++|+|+++||+++|++|... .+..|.|.++.++|.+||.+++.....+.
T Consensus 414 ~~-~~~~~~~v~~~Pt~~~~~~~~~~-----------~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 467 (481)
T 3f8u_A 414 AN-DVPSPYEVRGFPTIYFSPANKKL-----------NPKKYEGGRELSDFISYLQREATNPPVIQ 467 (481)
T ss_dssp SS-CCCTTCCCCSSSEEEEECTTCTT-----------SCEECCSCCSHHHHHHHHHHHCSSCCCCC
T ss_pred ch-hhHhhCCCcccCEEEEEeCCCeE-----------eeeEeCCCCCHHHHHHHHHHhcCCccccc
Confidence 34 78899999999999999876321 13568899999999999999987665543
No 102
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.34 E-value=2.3e-16 Score=131.90 Aligned_cols=103 Identities=24% Similarity=0.490 Sum_probs=86.5
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+.+++.++|++.+.+. +++++|.||++||++|+.+.|.++++++.+. +.+.++.+|+ +++.+++++|+|.
T Consensus 3 v~~l~~~~~~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-------~~~~~~~v~~--~~~~~~~~~~~v~ 72 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKS-DKPVLVDFWAPWCGPCRMIAPIIEELAKEYE-------GKVKVVKVNV--DENPNTAAQYGIR 72 (106)
Confidence 6788999999776443 4789999999999999999999999999875 3589999998 4678899999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHh
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQ 173 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~ 173 (521)
++||+++|++|+. +..+.|..+.++|.++|++.
T Consensus 73 ~~Pt~~~~~~g~~-------------~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 73 SIPTLLLFKNGQV-------------VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 9999999877643 34567888889999988764
No 103
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.56 E-value=1.8e-14 Score=140.59 Aligned_cols=108 Identities=17% Similarity=0.333 Sum_probs=90.9
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEec--CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---cccHH
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFA--NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTN 119 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA--~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~~~~ 119 (521)
.+.|+.|++++|+..+... +++||+||| |||| +.|.|+++|+.+.+. +.|.|+.|||+. +.+++
T Consensus 4 ~~~v~~Lt~~nF~~~i~~~--~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~-----~~v~~akVDvd~~g~~~~~~ 72 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVIPKS--KFVLVKFDTQYPYGE----KQDEFKRLAENSASS-----DDLLVAEVGISDYGDKLNME 72 (240)
T ss_dssp CTTCEECCTTHHHHHGGGC--SEEEEEECCSSCCSH----HHHHHHHHHHHHTTC-----TTEEEEEECCCCSSSCCSHH
T ss_pred CCCceECCHHHHHHHHcCC--CCEEEEEeCCCCCCc----chHHHHHHHHHhcCC-----CCeEEEEEeCCcccchhhHH
Confidence 3468899999999988653 789999999 9999 999999999999642 359999999642 35899
Q ss_pred HHHhCCCC--cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 120 LCDKFSVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 120 l~~~f~I~--~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+|++|+|+ +|||+++|++|+.. .+..|.|.++.+.|.+||++++
T Consensus 73 l~~~~~V~~~~~PTl~~f~~G~~~-----------~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 73 LSEKYKLDKESYPVFYLFRDGDFE-----------NPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHHHTTCCGGGCSEEEEEETTCSS-----------CCEECCSCSCHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCEEEEEeCCCcC-----------cceeecCCCCHHHHHHHHHHhc
Confidence 99999999 99999999987421 1346889999999999999886
No 104
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.55 E-value=3.3e-15 Score=169.44 Aligned_cols=112 Identities=16% Similarity=0.320 Sum_probs=89.6
Q ss_pred cccCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 43 VEVDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 43 ~~~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
...+.|+.|+.++|++.+.. ++++||+|||+||++|+++.|.|+++++.+. +.+.+++|||+ ++.++|+
T Consensus 113 ~~~~~v~~l~~~~f~~~i~~--~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~-------~~v~~~~vd~~--~~~~l~~ 181 (780)
T 3apo_A 113 DDDPEIITLERREFDAAVNS--GELWFVNFYSPGSSHSHDLAPTWREFAKEVD-------GLLRIGAVNCG--DDRMLCR 181 (780)
T ss_dssp TTCTTEEECCHHHHHHHHTS--SSCEEEEEECSSCHHHHHHHHHHHHHHHHTT-------TTSEEEEEETT--TCSSCC-
T ss_pred CCCcceeeechHhHHhhhcC--CCcEEEEEeCCCCcchhHhhHHHHHHHHHhc-------CceEEEEEeCC--CcHHHHH
Confidence 34557999999999999944 4789999999999999999999999999986 34999999995 5678999
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
+|+|+++||+++|++|+. +..|.|.++.+.|.+|+.++++..+
T Consensus 182 ~~~v~~~Pt~~~~~~g~~-------------~~~~~G~~~~~~l~~~l~~~~~~~~ 224 (780)
T 3apo_A 182 MKGVNSYPSLFIFRSGMA-------------AVKYNGDRSKESLVAFAMQHVRSTV 224 (780)
T ss_dssp -------CEEEEECTTSC-------------CEECCSCSCHHHHHHHHHTTSCCCE
T ss_pred HcCCceeeeEEEEeCCcE-------------eeEecCCCCHHHHHHHHHHhchhhh
Confidence 999999999999988742 3568899999999999999887654
No 105
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.55 E-value=1.5e-14 Score=138.74 Aligned_cols=108 Identities=16% Similarity=0.106 Sum_probs=86.5
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+..+++++|+..... .+..++|.|||+||++|+.+.|.|+++++.+.+.+ .+.+.++.||+ +++.+++++|+|+
T Consensus 118 ~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~---~~~v~~~~vd~--~~~~~l~~~~~v~ 191 (226)
T 1a8l_A 118 ETNLMDETKQAIRNI-DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAG---KGKILGDMVEA--IEYPEWADQYNVM 191 (226)
T ss_dssp CCCCCHHHHHHHTTC-CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTT---CCCEEEEEEEG--GGCHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHhc-CCCcEEEEEeCCCCCccHHHHHHHHHHHHhccccc---CCcEEEEEEEc--ccCHHHHHhCCCc
Confidence 456777788776533 23444999999999999999999999999985210 02599999998 4688999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++||+++|++|+. +..+.|.++.++|.++|++.+
T Consensus 192 ~~Pt~~~~~~G~~-------------~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 192 AVPKIVIQVNGED-------------RVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp SSCEEEEEETTEE-------------EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCeEEEEeCCce-------------eEEEcCCCCHHHHHHHHHHhh
Confidence 9999999987732 356789999999999998865
No 106
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.52 E-value=2.2e-14 Score=124.95 Aligned_cols=105 Identities=13% Similarity=0.186 Sum_probs=83.8
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecC-------CChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFAN-------WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----- 114 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~-------WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----- 114 (521)
.+...+.++|+..+.+..+++++|+|||+ ||++|+.+.|.++++++.+. +.+.++.||++.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~-------~~~~~~~vd~~~~~~~~ 78 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS-------EGCVFIYCQVGEKPYWK 78 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC-------TTEEEEEEECCCHHHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC-------CCcEEEEEECCCchhhh
Confidence 36677889999999875578999999999 99999999999999998875 359999999842
Q ss_pred cccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 115 KINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 115 d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
+.+.+++++|+|+++||+++|.++.. +..+.| .+.+.|.++|++
T Consensus 79 d~~~~~~~~~~i~~~Pt~~~~~~~~~-------------~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 79 DPNNDFRKNLKVTAVPTLLKYGTPQK-------------LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp CTTCHHHHHHCCCSSSEEEETTSSCE-------------EEGGGG-GCHHHHHHHHHC
T ss_pred chhHHHHHHCCCCeeCEEEEEcCCce-------------Eecccc-CCHHHHHHHHhc
Confidence 35778999999999999999876421 111222 567888888864
No 107
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.52 E-value=2.9e-14 Score=153.64 Aligned_cols=114 Identities=19% Similarity=0.413 Sum_probs=92.1
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
...+..|++++|+..+.+. ++++||+|||||||||+.+.|.|+++++.+.... ..+.++.||++. +. +.. |
T Consensus 357 ~~~v~~l~~~~f~~~v~~~-~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~----~~v~~~~vd~~~--~~-~~~-~ 427 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVNDP-KKDVLVLYYAPWCGHCKRLAPTYQELADTYANAT----SDVLIAKLDHTE--ND-VRG-V 427 (504)
T ss_dssp SCSEEEECTTTHHHHHHCT-TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHC----SSCEEEEEEGGG--CC-CSS-C
T ss_pred cccceecccccHHHhhccC-CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccC----CcEEEEEecCCc--cc-ccc-C
Confidence 4579999999999988654 4789999999999999999999999999885111 358999999953 32 234 9
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
+|+++||+++|++|+.. .+..|.|.++.++|.+||++++...+
T Consensus 428 ~v~~~Pt~~~~~~G~~~-----------~~~~~~G~~~~~~l~~~i~~~~~~~~ 470 (504)
T 2b5e_A 428 VIEGYPTIVLYPGGKKS-----------ESVVYQGSRSLDSLFDFIKENGHFDV 470 (504)
T ss_dssp CCSSSSEEEEECCTTSC-----------CCCBCCSCCCHHHHHHHHHHHCTTCC
T ss_pred CceecCeEEEEeCCcee-----------cceEecCCCCHHHHHHHHHhcCCCCC
Confidence 99999999999887431 13568899999999999999876543
No 108
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.51 E-value=2.2e-14 Score=126.11 Aligned_cols=100 Identities=19% Similarity=0.305 Sum_probs=78.4
Q ss_pred ccHHHHHhc--CCCCeEEEEEecCCChhHhhhhHHHH--HHHHHhCCCCCCCCCeEEEEEeeccc-cccHHHHHhCCC--
Q 009987 54 TNFDAVLRD--TPATYAVVEFFANWCPACRNYKPQYE--KVARLFNGPNAAHPGIILMTRVDCAL-KINTNLCDKFSV-- 126 (521)
Q Consensus 54 ~~f~~~l~~--~~~~~vlV~FyA~WCg~C~~~~P~~~--~lA~~~~~~~~~~~~~v~~~~VDc~~-d~~~~l~~~f~I-- 126 (521)
.+|++.+.. ..++++||+|||+||++|+.+.|.++ ++++.+. +.+.++.||++. +++.+++++|+|
T Consensus 16 ~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~l~~~~~v~~ 88 (133)
T 3fk8_A 16 TQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA-------KHFEVVKIDVGNFDRNLELSQAYGDPI 88 (133)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH-------HHCEEEEEECTTTTSSHHHHHHTTCGG
T ss_pred hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc-------CCEEEEEEeCCcccchHHHHHHhCCcc
Confidence 455554432 22588999999999999999999999 9999885 358999999832 468899999999
Q ss_pred -CcCceEEEe-cCCcccCCCCCCCccchhhhhccc-------cCCHHHHHHHHHHh
Q 009987 127 -GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED-------WQTADGLLTWINKQ 173 (521)
Q Consensus 127 -~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G-------~~~~~~L~~~i~~~ 173 (521)
.++||+++| ++|+.. ..+.| ..+.+++.+||++.
T Consensus 89 ~~~~Pt~~~~d~~G~~~-------------~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 89 QDGIPAVVVVNSDGKVR-------------YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp GGCSSEEEEECTTSCEE-------------EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCccceEEEECCCCCEE-------------EEecCCcccccccCCHHHHHHHHHHh
Confidence 999999999 677543 22333 57889999998764
No 109
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.50 E-value=3.8e-15 Score=129.95 Aligned_cols=108 Identities=21% Similarity=0.396 Sum_probs=88.3
Q ss_pred cCcceec-CcccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH
Q 009987 45 VDHAVEL-NATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (521)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (521)
...+..+ +.++|++.+... .+++++|.||++||++|+.+.|.++++++.+. .+.++.||+ +++.+++
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--------~v~~~~v~~--~~~~~~~ 82 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--------GAVFLKVDV--DELKEVA 82 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--------TBCCEECCT--TTSGGGH
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CCEEEEEec--cchHHHH
Confidence 4457777 468999988652 35789999999999999999999999999874 378999998 4678899
Q ss_pred HhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 122 DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 122 ~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
++|+|+++||+++|++|+.. ..+.| .+.++|.++|++.+..
T Consensus 83 ~~~~v~~~Pt~~~~~~g~~~-------------~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 83 EKYNVEAMPTFLFIKDGAEA-------------DKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp HHHTCCSSCCCCBCTTTTCC-------------BCCCT-TCTTTHHHHHHHHTSS
T ss_pred HHcCCCccceEEEEeCCeEE-------------EEEeC-CCHHHHHHHHHHHHhc
Confidence 99999999999998877432 34566 5788999999988753
No 110
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.50 E-value=9.8e-15 Score=140.46 Aligned_cols=104 Identities=18% Similarity=0.300 Sum_probs=85.3
Q ss_pred Ccceec-CcccHHHHHhcC-CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 46 DHAVEL-NATNFDAVLRDT-PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~~-~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..|..+ +.++|.+.+.+. +++++||.|||+||++|+.+.|.|+++++.+. .+.|+.||++ ++.++.+
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--------~v~f~~vd~~---~~~l~~~ 167 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--------MVKFCKIRAS---NTGAGDR 167 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--------TSEEEEEEHH---HHTCSTT
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--------CeEEEEEECC---cHHHHHH
Confidence 357788 889999988654 45789999999999999999999999999873 3899999984 6789999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccccC-------CHHHHHHHHHHh
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ-------TADGLLTWINKQ 173 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~-------~~~~L~~~i~~~ 173 (521)
|+|.++||+++|++|+.. ..+.|.. +.++|..+|.++
T Consensus 168 ~~i~~~PTl~~~~~G~~v-------------~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 168 FSSDVLPTLLVYKGGELI-------------SNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp SCGGGCSEEEEEETTEEE-------------EEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEE-------------EEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999999988543 2334433 358899998764
No 111
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.49 E-value=3.2e-14 Score=139.13 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=86.0
Q ss_pred Ccceec-CcccHHHHHhc-CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 46 DHAVEL-NATNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 46 ~~v~~L-~~~~f~~~l~~-~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
..|..+ +.++|...+.+ .+++++||.|||+||++|+.+.|.|+++|+.+. .+.|+.||++ . ..++.+
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~--------~v~f~kVd~d--~-~~l~~~ 180 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP--------MVKFCKIKAS--N-TGAGDR 180 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--------TSEEEEEEHH--H-HCCTTS
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--------CCEEEEEeCC--c-HHHHHH
Confidence 457888 78999999865 346899999999999999999999999999984 3899999984 2 678999
Q ss_pred CCCCcCceEEEecCCcccCCCCCCCccchhhhhccc-cCCHHHHHHHHHHh
Q 009987 124 FSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQ 173 (521)
Q Consensus 124 f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~~~L~~~i~~~ 173 (521)
|+|.++||+++|++|+..... .......| .++.+.|..+|.++
T Consensus 181 ~~I~~~PTll~~~~G~~v~~~-------vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 181 FSSDVLPTLLVYKGGELLSNF-------ISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp SCTTTCSEEEEEETTEEEEEE-------TTGGGGSCTTCCHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEECCEEEEEE-------eCCcccccccccHHHHHHHHHHc
Confidence 999999999999988654210 01111112 25778899999775
No 112
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.47 E-value=5.5e-14 Score=113.07 Aligned_cols=83 Identities=17% Similarity=0.253 Sum_probs=70.8
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCC
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~ 145 (521)
.+.+|.||++||++|+.+.|.++++++++. +.+.++.+|++ ++.+++++|+|+++||+++ +|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~--~G~~----- 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP-------DAVEVEYINVM--ENPQKAMEYGIMAVPTIVI--NGDV----- 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS-------SSEEEEEEESS--SSCCTTTSTTTCCSSEEEE--TTEE-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC-------CceEEEEEECC--CCHHHHHHCCCcccCEEEE--CCEE-----
Confidence 467999999999999999999999999985 35999999984 5678999999999999988 5531
Q ss_pred CCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 146 EPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+.|..+.++|.++|++.+
T Consensus 67 ----------~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 67 ----------EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp ----------ECCSSSSSHHHHHHHHHHC
T ss_pred ----------eeecCCCHHHHHHHHHHhC
Confidence 4677788999999998753
No 113
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.19 E-value=5e-15 Score=129.59 Aligned_cols=94 Identities=16% Similarity=0.318 Sum_probs=77.7
Q ss_pred CCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEe--cCCc
Q 009987 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWG--SPSK 139 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f--~~g~ 139 (521)
++++||+|||+||++|+.+.|.+ +++++.+. +.+.++.||++.+++.+++++|+|+++||+++| .+|+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~-------~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~ 91 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE-------ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGA 91 (130)
Confidence 47899999999999999999999 88888775 358899999976678899999999999999998 3443
Q ss_pred ccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 140 FVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 140 ~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
. ..+..+.|..+.+.|.++|++.++.
T Consensus 92 ~-----------~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 92 W-----------EEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 2 0135678888999999999887753
No 114
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.45 E-value=2.3e-13 Score=130.95 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=84.8
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.+..+++++|+..+.. .+..++|.|||+||++|+.+.|.++++++.+. .+.++.||+ +++.+++++|+|
T Consensus 119 ~~~~l~~~~~~~~~~~-~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--------~v~~~~vd~--~~~~~l~~~~~v 187 (229)
T 2ywm_A 119 RKPQLSEKTLELLQVV-DIPIEIWVFVTTSCGYCPSAAVMAWDFALAND--------YITSKVIDA--SENQDLAEQFQV 187 (229)
T ss_dssp TCCSCCHHHHHHHTTC-CSCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEEG--GGCHHHHHHTTC
T ss_pred CccCCCHHHHHHHHhc-CCCeEEEEEECCCCcchHHHHHHHHHHHHHCC--------CeEEEEEEC--CCCHHHHHHcCC
Confidence 3567888899887643 33445889999999999999999999999872 489999998 468899999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++||+++ +|+ +..+.|.++.++|.++|++.++
T Consensus 188 ~~~Pt~~~--~G~--------------~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 188 VGVPKIVI--NKG--------------VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp CSSSEEEE--GGG--------------TEEEESCCCHHHHHHHHHHHHH
T ss_pred cccCEEEE--CCE--------------EEEeeCCCCHHHHHHHHHHHhh
Confidence 99999988 442 3457899999999999988764
No 115
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.45 E-value=6.3e-14 Score=112.76 Aligned_cols=81 Identities=14% Similarity=0.230 Sum_probs=69.8
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCCCC
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~ 147 (521)
.+|.||++||++|+.+.|.++++++++. +.+.++.+|+ +++.+++++|+|+++||+++ +|+.
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~vd~--~~~~~~~~~~~v~~~Pt~~~--~G~~------- 65 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFG-------DKIDVEKIDI--MVDREKAIEYGLMAVPAIAI--NGVV------- 65 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHC-------SSCCEEEECT--TTCGGGGGGTCSSCSSEEEE--TTTE-------
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhc-------CCeEEEEEEC--CCCHHHHHhCCceeeCEEEE--CCEE-------
Confidence 5899999999999999999999999986 3588999998 45778999999999999998 5521
Q ss_pred CccchhhhhccccCCHHHHHHHHHHhc
Q 009987 148 NQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 148 ~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+.|..+.++|.++|++.+
T Consensus 66 --------~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 66 --------RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp --------EEECSSCCHHHHHHHHHHC
T ss_pred --------EEccCCCHHHHHHHHHHHh
Confidence 4678788999999998765
No 116
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.44 E-value=7.2e-14 Score=128.52 Aligned_cols=106 Identities=14% Similarity=0.226 Sum_probs=78.6
Q ss_pred ceecCcccHHHHHh--cCCCCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccccccHHH--
Q 009987 48 AVELNATNFDAVLR--DTPATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNL-- 120 (521)
Q Consensus 48 v~~L~~~~f~~~l~--~~~~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l-- 120 (521)
....+..+|++.+. ..+++++||+|||+||++|+.+.+.+ .++.+.++ +.+.++.||++.. .++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~-------~~~~~v~v~~d~~--~~~~~ 98 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN-------NDYVLITLYVDNK--TPLTE 98 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEETTCC--CEEEE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc-------CCEEEEEEecCcc--cccch
Confidence 34566778887763 23368999999999999999985554 55655554 2488999998532 222
Q ss_pred ------------------------HHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCC-HHHHHHHHHHhc
Q 009987 121 ------------------------CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT-ADGLLTWINKQT 174 (521)
Q Consensus 121 ------------------------~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~-~~~L~~~i~~~l 174 (521)
+++|+|+++||++++ ++|++. ..+.|..+ .+++.++|++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~-------------~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 99 PVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPL-------------NKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBS-------------SCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEE-------------eeccCCCCCHHHHHHHHHHHH
Confidence 789999999999998 666443 44568888 999999998876
Q ss_pred c
Q 009987 175 S 175 (521)
Q Consensus 175 ~ 175 (521)
.
T Consensus 166 ~ 166 (172)
T 3f9u_A 166 E 166 (172)
T ss_dssp H
T ss_pred H
Confidence 4
No 117
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.44 E-value=3.2e-13 Score=122.42 Aligned_cols=101 Identities=15% Similarity=0.298 Sum_probs=78.3
Q ss_pred ccHHHHHh--cCCCCeEEEEEe-cCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccc---------cccH
Q 009987 54 TNFDAVLR--DTPATYAVVEFF-ANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (521)
Q Consensus 54 ~~f~~~l~--~~~~~~vlV~Fy-A~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~~~ 118 (521)
.++.+.+. ...+++++|+|| |+||++|+.+.|.+ .++++.+. ..+.++.||++. +.+.
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-------~~~~~v~vd~~~~~~~~~~~~~~~~ 106 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-------VHLHMVEVDFPQKNHQPEEQRQKNQ 106 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-------HHCEEEEEECCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-------CcEEEEEecCccccCCChhhHhhHH
Confidence 44555443 223588999999 99999999999999 77776653 358899999864 2356
Q ss_pred HHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccC--CHHHHHHHHHHhcc
Q 009987 119 NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (521)
Q Consensus 119 ~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~--~~~~L~~~i~~~l~ 175 (521)
+++++|+|.++||++++ ++|++ +..+ |.. +.+.+.++|++.+.
T Consensus 107 ~l~~~~~v~~~Pt~~~~d~~G~~-------------~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 107 ELKAQYKVTGFPELVFIDAEGKQ-------------LARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCE-------------EEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEEcCCCCE-------------EEEe-cCCCCCHHHHHHHHHHHHh
Confidence 89999999999999999 56643 3455 777 89999999988765
No 118
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.44 E-value=2.6e-14 Score=121.74 Aligned_cols=75 Identities=16% Similarity=0.375 Sum_probs=61.2
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc----ccHHHHHhCCCCcCceEEEecCCccc
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----INTNLCDKFSVGHYPMLLWGSPSKFV 141 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----~~~~l~~~f~I~~yPTl~~f~~g~~~ 141 (521)
++++|+|||+|||+|+.++|.|+++++.+. .|||+.+ ++.+++++|+|+++||+++ +|+
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~-- 75 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR-- 75 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE--
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE--
Confidence 456899999999999999999999986652 4555422 5789999999999999877 441
Q ss_pred CCCCCCCccchhhhhccccCCHHHHHHHHH
Q 009987 142 AGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (521)
Q Consensus 142 ~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~ 171 (521)
.+.|.++.++|.+|+.
T Consensus 76 --------------~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 76 --------------TYTGVRSLEALAVASG 91 (106)
T ss_dssp --------------EEESCCCHHHHHHHHT
T ss_pred --------------EecCCCCHHHHHHHhC
Confidence 3778999999999884
No 119
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.41 E-value=1.1e-12 Score=115.97 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=84.1
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------
Q 009987 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------- 114 (521)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------- 114 (521)
..++++.+..... ++++++|.||++||++|+.+.|.++++++.+.+ .+.++.|+++.
T Consensus 15 ~~~~g~~~~~~~~--~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~ 85 (148)
T 2b5x_A 15 AWLNGEVTREQLI--GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQD-------QLNVVAVHMPRSEDDLDPGKIKETA 85 (148)
T ss_dssp EEESCCCCHHHHT--TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-------TSEEEEEECCCSTTTSSHHHHHHHH
T ss_pred ccccCcccchhhc--CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcC-------CcEEEEEEcCCCccccCHHHHHHHH
Confidence 5667777765433 358899999999999999999999999999863 27888888642
Q ss_pred -----------cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 115 -----------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 115 -----------d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+.+..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 86 ~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 86 AEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQL-------------RHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBE-------------EEEEESCSTTHHHHHHHHHHHT
T ss_pred HHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcE-------------EEEecCCCCHHHHHHHHHHHHh
Confidence 446789999999999999998 56643 3456788889999999988765
No 120
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.40 E-value=5.2e-13 Score=118.01 Aligned_cols=106 Identities=8% Similarity=0.144 Sum_probs=88.6
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
.+.++|.++|+..+.. +.+++|.|||+ |++|+.+.|.++++|++++ +.+.|+.||. ++++.+++.|||
T Consensus 7 lv~~~t~~~f~~~~~~--~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~-------gk~~f~~vd~--d~~~~~a~~~gi 74 (133)
T 2djk_A 7 LIGEIGPETYSDYMSA--GIPLAYIFAET-AEERKELSDKLKPIAEAQR-------GVINFGTIDA--KAFGAHAGNLNL 74 (133)
T ss_dssp CSEECCHHHHHHHHHT--TSCEEEEECSC-SSSHHHHHHHHHHHHHSST-------TTSEEEEECT--TTTGGGTTTTTC
T ss_pred ceeccChHHHHHHhcC--CCCEEEEEecC-hhhHHHHHHHHHHHHHHhC-------CeEEEEEEch--HHhHHHHHHcCC
Confidence 3778999999988654 37899999999 8999999999999999986 4699999997 568889999999
Q ss_pred Cc--CceEEEecC--CcccCCCCCCCccchhhhhcc--ccCCHHHHHHHHHHhcccCc
Q 009987 127 GH--YPMLLWGSP--SKFVAGSWEPNQEKKEIRALE--DWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 127 ~~--yPTl~~f~~--g~~~~~~~~~~~~~~~v~~~~--G~~~~~~L~~~i~~~l~~~~ 178 (521)
++ +||+++|.+ |+. ..+. |..+.+.|.+||++.+...+
T Consensus 75 ~~~~iPtl~i~~~~~g~~--------------~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 75 KTDKFPAFAIQEVAKNQK--------------FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp CSSSSSEEEEECTTTCCB--------------CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred CcccCCEEEEEecCcCcc--------------cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 99 999999975 321 1233 88999999999999886443
No 121
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.40 E-value=8.3e-13 Score=149.69 Aligned_cols=113 Identities=19% Similarity=0.415 Sum_probs=95.0
Q ss_pred CcceecCcccHHHHHhcCC-CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 46 DHAVELNATNFDAVLRDTP-ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~-~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
++|..|+.++|++.+.+.+ +..++|.||||||+||+++.|.|+++|+.++ +.|.|+.|||+ .+..+|++|
T Consensus 543 ~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~-------~~v~~~~vd~~--~~~~l~~~~ 613 (780)
T 3apo_A 543 PSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT-------GLINVGSVDCG--QYHSFCTQE 613 (780)
T ss_dssp CSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred cceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh-------CCeEEEEEECc--chHHHHHHc
Confidence 4688999999999987643 4678999999999999999999999999997 35999999995 578899999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhccc-cCCHHHHHHHHHHhccc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~~~L~~~i~~~l~~ 176 (521)
+|++|||+++|++|.... .....|.| .++.++|.+||.+.+..
T Consensus 614 ~v~~~Pti~~~~~~~~~~---------~~~~~y~g~~~~~~~l~~fi~~~~~~ 657 (780)
T 3apo_A 614 NVQRYPEIRFYPQKSSKA---------YQYHSYNGWNRDAYSLRSWGLGFLPQ 657 (780)
T ss_dssp TCCSSSEEEEECCCSSSC---------CSCEECCCSCCSHHHHHHHHHTTSCC
T ss_pred CCCCCCeEEEEcCCCcCc---------cchhhcCCCCCCHHHHHHHHhhhccc
Confidence 999999999998763210 12345788 89999999999988754
No 122
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.40 E-value=5.5e-13 Score=113.84 Aligned_cols=98 Identities=17% Similarity=0.177 Sum_probs=77.4
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHH----HHH
Q 009987 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN----LCD 122 (521)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~----l~~ 122 (521)
...+ +.++|++++.. +++++|.|+|+|||+|+.+.|.++++++. . .+.++.||. +++++ ++.
T Consensus 8 ~~~i~s~e~f~~ii~~--~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--------~v~~~~vdV--de~r~~Sn~IA~ 74 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEE--NKYVFVLKHSETCPISANAYDQFNKFLYE-R--------DMDGYYLIV--QQERDLSDYIAK 74 (112)
T ss_dssp EEECCSHHHHHHHHHH--CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--------TCCEEEEEG--GGGHHHHHHHHH
T ss_pred eeecCCHHHHHHHHhc--CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--------CceEEEEEe--ecCchhhHHHHH
Confidence 4455 45789998876 48899999999999999999999999985 2 378899997 45654 899
Q ss_pred hCCCCc-CceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 123 KFSVGH-YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 123 ~f~I~~-yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
+|||++ .||+++|++|+... ..-.+..+.+.|.+.+
T Consensus 75 ~~~V~h~sPq~il~k~G~~v~------------~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 75 KTNVKHESPQAFYFVNGEMVW------------NRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHTCCCCSSEEEEEETTEEEE------------EEEGGGCSHHHHHHHT
T ss_pred HhCCccCCCeEEEEECCEEEE------------EeeccccCHHHHHHhh
Confidence 999995 99999999986542 2235667777776654
No 123
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.40 E-value=1.3e-12 Score=127.78 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=81.2
Q ss_pred cCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCc
Q 009987 51 LNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (521)
Q Consensus 51 L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yP 130 (521)
+++++++. +.+..+++++|.|||||||||+.+.|.|++++..+...+ .+.|.++.||++ .+++++++|+|+++|
T Consensus 125 l~~~~~~~-~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~---~~~v~~~~vd~~--~~~~~~~~~~V~~vP 198 (243)
T 2hls_A 125 LEDATKEA-LKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQG---NPVILSEAVEAY--ENPDIADKYGVMSVP 198 (243)
T ss_dssp CCHHHHHH-HHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTT---CCCEEEEEEETT--TCHHHHHHTTCCSSS
T ss_pred CCHHHHHH-HHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHccccc---CCcEEEEEEECc--cCHHHHHHcCCeeeC
Confidence 44444443 333334677999999999999999999999999883100 024899999984 578999999999999
Q ss_pred eEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|+++ +|+ ..+.|.++.++|.++|.+.++...
T Consensus 199 t~~i--~G~---------------~~~~G~~~~~~l~~~l~~~~~~~~ 229 (243)
T 2hls_A 199 SIAI--NGY---------------LVFVGVPYEEDFLDYVKSAAEGRL 229 (243)
T ss_dssp EEEE--TTE---------------EEEESCCCHHHHHHHHHHHHTTCC
T ss_pred eEEE--CCE---------------EEEeCCCCHHHHHHHHHHHhhccc
Confidence 9988 542 127899999999999999987644
No 124
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.40 E-value=6.2e-14 Score=121.06 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=69.8
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCC
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~ 145 (521)
+.+||+|||+||++|+.+.|.+... +.... ....+.+..||.+.+...+++.+|+|.++|||++|.+|
T Consensus 19 ~~~LV~F~A~wC~~Ck~~~~~i~~~---~~~~a--~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G------- 86 (116)
T 3dml_A 19 ELRLLMFEQPGCLYCARWDAEIAPQ---YPLTD--EGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD------- 86 (116)
T ss_dssp CEEEEEEECTTCHHHHHHHHHTTTT---GGGSH--HHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT-------
T ss_pred CCEEEEEECCCCHHHHHHHHHHHhh---HHHhh--hcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC-------
Confidence 5689999999999999998654332 21000 00125678888865555688999999999999999987
Q ss_pred CCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++.++.|....+.+.+||++.+.
T Consensus 87 ------~ev~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 ------VESGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp ------EEEEEEECCCCHHHHHHHHHHHHH
T ss_pred ------EEEeeecCCCCHHHHHHHHHHHHh
Confidence 455678999999999999988764
No 125
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.38 E-value=9.6e-13 Score=114.56 Aligned_cols=104 Identities=21% Similarity=0.323 Sum_probs=80.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (521)
+..++++.+.. ....+++++|.||++||++|+.+.|.++++++.+. .+.++.|+++.
T Consensus 10 ~~~~~g~~~~l--~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~ 79 (136)
T 1zzo_A 10 AKTLDGHDFHG--ESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--------EVTFVGVAGLDQVPAMQEFVNKYP 79 (136)
T ss_dssp EEBTTSCEEEG--GGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHTT
T ss_pred cccCCCCEeeH--HHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--------CeEEEEEeCCCCHHHHHHHHHHcC
Confidence 44455555442 22245789999999999999999999999999875 27888888753
Q ss_pred --------cccHHHHHhCCCCcCceEEEec-CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 115 --------KINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 115 --------d~~~~l~~~f~I~~yPTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+.+..+++.|+|.++||++++. +|+ .+ .+.|..+.++|.++|++.++
T Consensus 80 ~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~-------------i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 80 VKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN-------------VD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp CTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCC-------------EE-EEESCCCHHHHHHHHHHHC-
T ss_pred CCceEEEEcCCcHHHHHcCCCCCceEEEECCCCC-------------EE-EEecCCCHHHHHHHHHHHhc
Confidence 3457899999999999999984 553 23 56788899999999988764
No 126
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.38 E-value=7.8e-13 Score=127.18 Aligned_cols=101 Identities=11% Similarity=0.094 Sum_probs=79.8
Q ss_pred ccHHHHH-hcCCCCeEEEEEe-----cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 54 TNFDAVL-RDTPATYAVVEFF-----ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 54 ~~f~~~l-~~~~~~~vlV~Fy-----A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
+.+++.+ .+.. ++++|.|| +|||+||+.+.|+|+++|+++.+. +.|.++.|||+ +++++|++|+|+
T Consensus 9 ~~l~~~~~~~~~-~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~-----~~v~~~~vd~~--~~~~l~~~~~v~ 80 (229)
T 2ywm_A 9 MQLKELAQKEFK-EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQ-----DKIKLDIYSPF--THKEETEKYGVD 80 (229)
T ss_dssp HHHHHHHHHHCC-SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCT-----TTEEEEEECTT--TCHHHHHHTTCC
T ss_pred HHHHHHHHHhcc-CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCC-----CceEEEEecCc--ccHHHHHHcCCC
Confidence 4555666 3433 45566666 899999999999999999888431 46999999994 689999999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|||+++|++|. ...+|.|.++.+++.+|+.+.+.
T Consensus 81 ~~Ptl~~~~~~~-------------~~~~~~G~~~~~~l~~~~~~~~~ 115 (229)
T 2ywm_A 81 RVPTIVIEGDKD-------------YGIRYIGLPAGLEFTTLINGIFH 115 (229)
T ss_dssp BSSEEEEESSSC-------------CCEEEESCCCTTHHHHHHHHHHH
T ss_pred cCcEEEEECCCc-------------ccceecCCccHHHHHHHHHHHHh
Confidence 999999997542 23568899999999999988653
No 127
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.38 E-value=1e-12 Score=114.73 Aligned_cols=89 Identities=17% Similarity=0.305 Sum_probs=73.1
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------cccHHHHHh
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNLCDK 123 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------d~~~~l~~~ 123 (521)
++++++|.||++||++|+.+.|.++++++++. .+.++.|+++. +.+..++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 94 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--------AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWAR 94 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--------CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHh
Confidence 45789999999999999999999999999984 37888898854 226789999
Q ss_pred CCCCcCceEEEe-cCCcccCCCCCCCccchhhhhcc---ccCCHHHHHHHHHHhc
Q 009987 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALE---DWQTADGLLTWINKQT 174 (521)
Q Consensus 124 f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~---G~~~~~~L~~~i~~~l 174 (521)
|+|.++||++++ ++|++ + .+. |..+.++|.++|++.+
T Consensus 95 ~~i~~~P~~~lid~~G~i-------------~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 95 YNVPWQPAFVFYRADGTS-------------T-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTCCSSSEEEEECTTSCE-------------E-EECCSSSCCCHHHHHHHHHHC-
T ss_pred cCCCCCCEEEEECCCCcE-------------E-EEEcCCCccCHHHHHHHHHHHh
Confidence 999999999998 45532 2 456 8889999999998754
No 128
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.36 E-value=9.8e-13 Score=126.01 Aligned_cols=102 Identities=10% Similarity=0.156 Sum_probs=81.3
Q ss_pred cccHHHHH-hcCCCCeEEEEEecC-CChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCc
Q 009987 53 ATNFDAVL-RDTPATYAVVEFFAN-WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYP 130 (521)
Q Consensus 53 ~~~f~~~l-~~~~~~~vlV~FyA~-WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yP 130 (521)
.+.++..+ ....+.+++|.||++ ||++|+.+.|.|+++++. . +.|.++.|||+..+++++|++|+|+++|
T Consensus 9 ~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~-------~~v~~~~vd~~~~~~~~~~~~~~v~~~P 80 (226)
T 1a8l_A 9 KKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-T-------DKLSYEIVDFDTPEGKELAKRYRIDRAP 80 (226)
T ss_dssp HHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-C-------TTEEEEEEETTSHHHHHHHHHTTCCSSS
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-C-------CceEEEEEeCCCcccHHHHHHcCCCcCc
Confidence 45566667 444456778999999 999999999999999864 2 4599999999643389999999999999
Q ss_pred eEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 131 MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 131 Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|+++|++|+.. ..+|.|.++.+.+.+|+...+
T Consensus 81 t~~~~~~g~~~------------~~~~~G~~~~~~l~~~l~~~l 112 (226)
T 1a8l_A 81 ATTITQDGKDF------------GVRYFGLPAGHEFAAFLEDIV 112 (226)
T ss_dssp EEEEEETTBCC------------SEEEESCCCTTHHHHHHHHHH
T ss_pred eEEEEcCCcee------------eEEEeccCcHHHHHHHHHHHH
Confidence 99999776321 145778888889999988765
No 129
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.36 E-value=1.1e-12 Score=115.56 Aligned_cols=88 Identities=16% Similarity=0.373 Sum_probs=74.0
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------------------cccHHH
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTNL 120 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~~~l 120 (521)
.++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++. +.+..+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 106 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS------DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGEL 106 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC------SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC------CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhH
Confidence 568999999999999999999999999999863 348899999854 336689
Q ss_pred HHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 121 ~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
++.|+|.++||++++ ++|++ +..+.|..+.+.|.++|
T Consensus 107 ~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 107 MKEYHIITIPTSFLLNEKGEI-------------EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HHHTTCCEESEEEEECTTCCE-------------EEEEESCCCHHHHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCcE-------------EEEEcCCcCHHHHHHhh
Confidence 999999999999998 56643 34577889999998887
No 130
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=3.2e-12 Score=114.52 Aligned_cols=97 Identities=19% Similarity=0.334 Sum_probs=78.1
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc----------------------ccc
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------------------KIN 117 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------------------d~~ 117 (521)
+.+.+++++||.|||+||++|+.+.|.++++++++.+ ..+.++.|+++. +..
T Consensus 19 l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (151)
T 3raz_A 19 LQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK------GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANS 92 (151)
T ss_dssp GGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT------TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCH
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccch
Confidence 3444578999999999999999999999999999854 348899998842 134
Q ss_pred HHHHHhCC--CCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 118 TNLCDKFS--VGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 118 ~~l~~~f~--I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
..+++.|+ |.++||++++ ++|++ +..+.|..+.++|.++|++...
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGY-------------RQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTE-------------EEECCSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcE-------------EEEECCCCCHHHHHHHHHHHHH
Confidence 66889999 9999988887 56643 3567888999999999988654
No 131
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.36 E-value=1.8e-12 Score=115.94 Aligned_cols=94 Identities=14% Similarity=0.312 Sum_probs=77.3
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--------------------ccHHHHHh
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------INTNLCDK 123 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------~~~~l~~~ 123 (521)
+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+ .+..+++.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~------~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 98 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS------QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDA 98 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHh
Confidence 468899999999999999999999999999864 2488889988532 14579999
Q ss_pred CCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 124 f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+..
T Consensus 99 ~~v~~~P~~~lid~~G~i-------------~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 99 YDVSPLPTTFLINPEGKV-------------VKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp TTCCSSCEEEEECTTSEE-------------EEEEESCCCHHHHHHHHHHHSCC
T ss_pred cCCCCCCeEEEECCCCcE-------------EEEEeCCCCHHHHHHHHHHHHhh
Confidence 999999998887 56643 34567888999999999988754
No 132
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.34 E-value=1.6e-12 Score=117.66 Aligned_cols=108 Identities=15% Similarity=0.197 Sum_probs=81.9
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc-------------
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA------------- 113 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~------------- 113 (521)
.+..++++.+. +...+++++||+|||+||++|+.+.|.++++++++... .+.|+.|+++
T Consensus 22 ~l~~~~g~~~~--~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~ 93 (164)
T 2h30_A 22 TMKTADNRPAS--VYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS------SANLITVASPGFLHEKKDGEFQK 93 (164)
T ss_dssp TCEETTSSBGG--GGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT------TSEEEEEECTTSTTCCCTTHHHH
T ss_pred ccCCCCCCEee--HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC------CcEEEEEEcCCCccccCHHHHHH
Confidence 46667777666 33445688999999999999999999999999987542 2455544431
Q ss_pred -------------ccccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 114 -------------LKINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 114 -------------~d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
.+.+.+++++|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 94 ~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 94 WYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDV-------------QRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp HHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCE-------------EEEEESCCCHHHHHHHHHCTTC
T ss_pred HHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 1345789999999999999988 56643 3456788999999999988764
No 133
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.34 E-value=3.7e-12 Score=115.24 Aligned_cols=107 Identities=13% Similarity=0.267 Sum_probs=81.6
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC--
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-- 124 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f-- 124 (521)
.+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++ .+.+.+++|
T Consensus 18 ~l~~~~g~~~~--l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~v~~v~v~~d--~~~~~~~~~~~ 87 (165)
T 3or5_A 18 SGVTVDGKPFS--SASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASR------GFTFVGIAVN--EQLPNVKNYMK 87 (165)
T ss_dssp EEECTTSCEEE--GGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT------TEEEEEEECS--CCHHHHHHHHH
T ss_pred eeeCCCCCEec--hhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccC------CeEEEEEECC--CCHHHHHHHHH
Confidence 35555555554 33334689999999999999999999999999999742 3899999985 345555555
Q ss_pred -------------------------CCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 125 -------------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 125 -------------------------~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+|.++||++++ ++|++ +..+.|..+.++|.++|++.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 88 TQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNV-------------SGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp HHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBE-------------EEEECSCCCHHHHHHHHHHHHC-
T ss_pred HcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHhh
Confidence 89999998887 56543 34577889999999999998764
No 134
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.33 E-value=4.2e-12 Score=114.39 Aligned_cols=93 Identities=17% Similarity=0.267 Sum_probs=74.7
Q ss_pred CCCeEEEEEecCCChhHhh-hhHHHHHHHHHhCCCCCCCCCeEEEEEeecc--------------------------ccc
Q 009987 64 PATYAVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------LKI 116 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~-~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--------------------------~d~ 116 (521)
+++++||+||++||++|+. +.|.++++++++.+. .+.++.|+++ .+.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~------~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 102 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES------QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDM 102 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT------TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC------CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECC
Confidence 3589999999999999999 599999999999742 3888888862 122
Q ss_pred cHH------HHHhCCCCcCceEEEec-CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 117 NTN------LCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 117 ~~~------l~~~f~I~~yPTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
... +.+.|+|.++||++++. +|++ +..+.|..+.+.|.+.|++.+.
T Consensus 103 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 103 PREGQRIPSTMKKYRLEGTPSIILADRKGRI-------------RQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CCTTCSSCHHHHHTTCCSSSEEEEECTTSBE-------------EEEEESCCCHHHHHHHHHHHHT
T ss_pred ccccchhhhHHHhcccCccceEEEECCCCcE-------------EEEecCcCCHHHHHHHHHHHHh
Confidence 334 89999999999998884 5543 3456788899999999998875
No 135
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.32 E-value=2.6e-12 Score=101.45 Aligned_cols=74 Identities=5% Similarity=0.114 Sum_probs=60.8
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCCCC
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~ 147 (521)
..|+|||+||++|+.+.|.++++++.+. +.+.++.|| +.+++++|+|+++||+++ +|+..
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~-------~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G~~~------ 61 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG-------IDAEFEKIK-----EMDQILEAGLTALPGLAV--DGELK------ 61 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT-------CCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TTEEE------
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC-------CceEEEEec-----CHHHHHHCCCCcCCEEEE--CCEEE------
Confidence 3689999999999999999999999985 358888888 578999999999999988 65432
Q ss_pred CccchhhhhccccC-CHHHHHHHH
Q 009987 148 NQEKKEIRALEDWQ-TADGLLTWI 170 (521)
Q Consensus 148 ~~~~~~v~~~~G~~-~~~~L~~~i 170 (521)
. .|.. +.++|.++|
T Consensus 62 -------~--~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 -------I--MGRVASKEEIKKIL 76 (77)
T ss_dssp -------E--CSSCCCHHHHHHHC
T ss_pred -------E--cCCCCCHHHHHHHh
Confidence 1 2666 788887765
No 136
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.32 E-value=6e-13 Score=122.04 Aligned_cols=108 Identities=15% Similarity=0.207 Sum_probs=72.4
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHH-HHHhCCC--CcCc
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-LCDKFSV--GHYP 130 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~-l~~~f~I--~~yP 130 (521)
++|+..... ++++||+|||+||++|+.+.|.++++++... ..+.|+.||++. +.. ++..|++ +++|
T Consensus 37 ~~~~~~~~~--~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~-------~~~~~~~v~~d~--~~~~~~~~~~~~~~~~P 105 (164)
T 1sen_A 37 DGKKEAAAS--GLPLMVIIHKSWCGACKALKPKFAESTEISE-------LSHNFVMVNLED--EEEPKDEDFSPDGGYIP 105 (164)
T ss_dssp HHHHHHHHH--TCCEEEEEECTTCHHHHHHHHHHHTCHHHHH-------HHTTSEEEEEEG--GGSCSCGGGCTTCSCSS
T ss_pred HHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhh-------cCCeEEEEEecC--CchHHHHHhcccCCcCC
Confidence 455555544 4789999999999999999999999876653 235577788743 333 7788888 6699
Q ss_pred eEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 131 MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 131 Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+++| ++|+......... ..........+.+.|+++|++.+.
T Consensus 106 t~~~~d~~G~~~~~~~G~~---~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 106 RILFLDPSGKVHPEIINEN---GNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp EEEEECTTSCBCTTCCCTT---SCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEEeCCC---CccchhcccCCHHHHHHHHHHHHH
Confidence 99999 6776542100000 000000114788999999988764
No 137
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.31 E-value=4.1e-12 Score=112.49 Aligned_cols=91 Identities=11% Similarity=0.275 Sum_probs=72.1
Q ss_pred CCCCeEEEEEecCCChhHhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEeeccccc-----------------------cH
Q 009987 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI-----------------------NT 118 (521)
Q Consensus 63 ~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~-~~~~~~~~~~v~~~~VDc~~d~-----------------------~~ 118 (521)
.+++++||.||++||++|+.+.|.+.++++.+ .+ ..+.++.|+++.+. +.
T Consensus 31 ~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 104 (148)
T 3fkf_A 31 FRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKN------KNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSS 104 (148)
T ss_dssp TTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTC------TTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGC
T ss_pred cCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC------CCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcch
Confidence 35689999999999999999999999999998 53 23888888875433 55
Q ss_pred HHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 119 NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 119 ~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
.+++.|+|.++||++++ ++|++.. .+ .+.++|.+.|++.+.
T Consensus 105 ~~~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 105 ETAKQYAILTLPTNILLSPTGKILA-------------RD---IQGEALTGKLKELLK 146 (148)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEE-------------ES---CCHHHHHHHHHHHC-
T ss_pred HHHHhcCCCCcCEEEEECCCCeEEE-------------ec---CCHHHHHHHHHHHHc
Confidence 89999999999999988 5664431 11 278888888887764
No 138
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.31 E-value=4.8e-12 Score=109.88 Aligned_cols=90 Identities=17% Similarity=0.385 Sum_probs=72.0
Q ss_pred CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc--------------------------ccc
Q 009987 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------LKI 116 (521)
Q Consensus 63 ~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--------------------------~d~ 116 (521)
.+++++||.||++||++|+.+.|.++++++.+. ..+.++.|++. .+.
T Consensus 20 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 92 (138)
T 4evm_A 20 YKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-------DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDP 92 (138)
T ss_dssp GTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-------TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECT
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-------CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECc
Confidence 346899999999999999999999999999853 34788888532 133
Q ss_pred cHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 117 NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
+..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++
T Consensus 93 ~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 93 SGKLLETYGVRSYPTQAFIDKEGKL-------------VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCHHHHHTTCCSSSEEEEECTTCCE-------------EEEEESCCCHHHHHHHHHH
T ss_pred chHHHHHcCcccCCeEEEECCCCcE-------------EEeecCCCcHHHHHHHHHh
Confidence 5679999999999999998 56643 3456788899999998875
No 139
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.30 E-value=3.2e-12 Score=117.79 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=64.3
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC---
Q 009987 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS--- 125 (521)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~--- 125 (521)
+.++++.++ .+.+.++++++|+|||+|||+|+.+.|.++++++.+. .+.|..||. |+++++.++|.
T Consensus 39 ~~~~~~~~~-~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--------~v~~~~v~~--d~~~~~~~~~~~~~ 107 (167)
T 1z6n_A 39 NGLPSALTE-RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--------NIELAIISK--GRAEDDLRQRLALE 107 (167)
T ss_dssp HCCCHHHHH-HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--------TEEEEEECH--HHHHHHTTTTTTCS
T ss_pred cCCCHHHHH-HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--------CcEEEEEEC--CCCHHHHHHHHHcC
Confidence 345555544 4555556889999999999999999999999998763 388999997 56788999997
Q ss_pred CCcCceEEEecCC
Q 009987 126 VGHYPMLLWGSPS 138 (521)
Q Consensus 126 I~~yPTl~~f~~g 138 (521)
|+++||+++|.+|
T Consensus 108 v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 108 RIAIPLVLVLDEE 120 (167)
T ss_dssp SCCSSEEEEECTT
T ss_pred CCCcCeEEEECCC
Confidence 9999999999764
No 140
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.30 E-value=8.8e-12 Score=112.14 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=76.0
Q ss_pred cCCCCeEEEEEecCCChhHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEeecc--------------------------c
Q 009987 62 DTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCA--------------------------L 114 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg~C~~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--------------------------~ 114 (521)
+.+++++||+|||+||++|+.+ .|.++++++++.+ ..+.++.|+++ .
T Consensus 25 ~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (158)
T 3eyt_A 25 DLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE------DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGV 98 (158)
T ss_dssp GGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT------TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEE
T ss_pred HhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc------CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEE
Confidence 3346899999999999999996 9999999999974 24888888863 1
Q ss_pred cccH-----HHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 115 KINT-----NLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 115 d~~~-----~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+.+. .+++.|+|.++||++++ ++|++ +..+.|..+.+.|.+.|++.+..
T Consensus 99 d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 99 DQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDL-------------RAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp ECCCSSSSCHHHHHTTCCSSSEEEEECTTSEE-------------EEEEESCCCHHHHHHHHHHHHTS
T ss_pred cCccchhhHHHHHHcCCCCCCEEEEECCCCCE-------------EEEEeCCCCHHHHHHHHHHHhcc
Confidence 1222 58999999999998887 55543 34567888999999999988753
No 141
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.30 E-value=5.8e-12 Score=112.43 Aligned_cols=108 Identities=17% Similarity=0.352 Sum_probs=82.5
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------- 116 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~----------- 116 (521)
+..++++.+. +.+..++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+.
T Consensus 15 l~~~~g~~~~--l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 86 (152)
T 2lja_A 15 YPDINGKTVS--LADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAG------KDIHFVSLSCDKNKKAWENMVTKDQ 86 (152)
T ss_dssp EEETTTEEEE--STTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT------SSEEEEEEECCSCHHHHHHHHHHHT
T ss_pred eecCCCCEee--HHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc------CCeEEEEEEccCcHHHHHHHHHhcC
Confidence 4444444432 3344568999999999999999999999999999864 24889999885432
Q ss_pred ----------cHHHHHhCCCCcCceEEEec-CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 117 ----------NTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 117 ----------~~~l~~~f~I~~yPTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+..+++.|+|.++||++++. +|++. ..+.|..+.++|.++|++.++.
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 87 LKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKII-------------SANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp CCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEE-------------ESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEE-------------EccCCCCCHHHHHHHHHHHhcc
Confidence 23789999999999999885 55433 3456778899999999988754
No 142
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.27 E-value=5.1e-12 Score=111.89 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=77.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHH--------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTN-------- 119 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~-------- 119 (521)
+..+++..+. +.+.+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++. +.+
T Consensus 16 l~~~~g~~~~--l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~------~~~~~v~v~~d~--~~~~~~~~~~~ 85 (148)
T 3hcz_A 16 MTDTTGTYRY--LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA------KGIQVYAANIER--KDEEWLKFIRS 85 (148)
T ss_dssp CBCTTSCBCC--GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG------GTEEEEEEECCS--SSHHHHHHHHH
T ss_pred EecCCCCEEE--hHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc------CCEEEEEEEecC--CHHHHHHHHHH
Confidence 4444444433 3444568999999999999999999999999999974 238999999852 333
Q ss_pred -----------------HHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 120 -----------------LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 120 -----------------l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+++.|+|.++||++++ ++|++. ..+.|..+.+.+++.+.+.+
T Consensus 86 ~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 86 KKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVII-------------AKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEE-------------EESCCGGGHHHHHHHHHHHH
T ss_pred cCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEE-------------EecCCHHHHHHHHHHHHHHh
Confidence 8999999999999998 566443 34556666777777666544
No 143
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.27 E-value=8e-12 Score=111.68 Aligned_cols=94 Identities=14% Similarity=0.225 Sum_probs=75.7
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc---------------------ccccHHHHH
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCD 122 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~l~~ 122 (521)
+++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+.+ .+.+..+++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 100 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNK------NFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQ 100 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGT------TEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC------CeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHH
Confidence 3588999999999999999999999999998742 3777776632 134567999
Q ss_pred hCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
.|+|.++||++++ ++|++ +..+.|..+.+.|.++|++.+..
T Consensus 101 ~~~i~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 101 AFGTQVYPTSVLIGKKGEI-------------LKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp HHTCCSSSEEEEECSSSCC-------------CEEEESSCCHHHHHHHHHHHHHC
T ss_pred HcCCCccCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHHh
Confidence 9999999999988 55543 24577889999999999988764
No 144
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.26 E-value=1.5e-11 Score=110.15 Aligned_cols=91 Identities=19% Similarity=0.311 Sum_probs=71.8
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----------------------cHHH
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTNL 120 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------~~~l 120 (521)
++++++|.||++||++|+.+.|.++++++.+.+. .+.++.|+++.+. +..+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 101 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDK------GFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDV 101 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTT------TEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHH
Confidence 4689999999999999999999999999999742 3889999885321 5789
Q ss_pred HHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 121 ~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
++.|+|.++||++++ ++|++.. .+ .+.++|.++|++.+..
T Consensus 102 ~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~l~~~ 142 (152)
T 2lrn_A 102 LESYCIVGFPHIILVDPEGKIVA-------------KE---LRGDDLYNTVEKFVNG 142 (152)
T ss_dssp HHHTTCCSSCEEEEECTTSEEEE-------------EC---CCTTHHHHHHHHHHTS
T ss_pred HHHhCCCcCCeEEEECCCCeEEE-------------ee---CCHHHHHHHHHHHHhh
Confidence 999999999999888 6665432 11 3456788888776653
No 145
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.25 E-value=5.1e-12 Score=114.49 Aligned_cols=88 Identities=9% Similarity=0.023 Sum_probs=61.3
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHH---HHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEec-CCcc
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVA---RLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGS-PSKF 140 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA---~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~-~g~~ 140 (521)
++++||+|||+|||+|+.+.|.+.+.. +..+ ..|+.||++ +++.++..+|+|.++||+++|. +|+.
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~---------~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ---------NKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTV 113 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH---------HTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCB
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh---------cCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCE
Confidence 588999999999999999999998643 2221 124445543 2344567899999999999997 7754
Q ss_pred cCCCCCCCccchhhhhcccc----------CCHHHHHHHHHHhcc
Q 009987 141 VAGSWEPNQEKKEIRALEDW----------QTADGLLTWINKQTS 175 (521)
Q Consensus 141 ~~~~~~~~~~~~~v~~~~G~----------~~~~~L~~~i~~~l~ 175 (521)
.. ++.|. .+.+.+++.+++.+.
T Consensus 114 v~-------------~~~G~~~~~~~~~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 114 RA-------------DIAGRYSNRLYTYEPRDLPLLIENMKKALR 145 (151)
T ss_dssp CT-------------TCCCSCTTSTTCCCGGGHHHHHHHHHHHHS
T ss_pred EE-------------EEeCCcCCcccccchhhHHHHHHHHHHHHH
Confidence 43 23333 456677777776653
No 146
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.23 E-value=1.4e-11 Score=108.72 Aligned_cols=103 Identities=12% Similarity=0.302 Sum_probs=72.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEeecccccc-------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN------- 117 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~---lA~~~~~~~~~~~~~v~~~~VDc~~d~~------- 117 (521)
+..+++..+. +.+.+++++||.|||+||++|+.+.|.+.+ +++.+.+ ..+.++.|+++.+..
T Consensus 12 l~~~~g~~~~--l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~------~~~~~v~v~~d~~~~~~~~~~~ 83 (142)
T 3ewl_A 12 YVTVHGDNSR--MSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN------GTLRVLAIYPDENREEWATKAV 83 (142)
T ss_dssp EECTTCCEEE--GGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH------TSEEEEEEECSSCHHHHHHHHT
T ss_pred EECCCCCEEE--hhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc------CCeEEEEEEecCCHHHHHHHHH
Confidence 3344444332 344457899999999999999999999998 8888864 238888888752211
Q ss_pred -------------HHH--HHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 118 -------------TNL--CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 118 -------------~~l--~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
..+ .+.|+|.++||++++ ++|++. .+..+.++|.++|++..
T Consensus 84 ~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~----------------~~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 84 YMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVI----------------LKDTSMEQLIDYLATQA 140 (142)
T ss_dssp TSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEE----------------ECSCCHHHHHHHHHC--
T ss_pred HcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEE----------------ecCCCHHHHHHHHHHHc
Confidence 112 338999999999988 455432 24578899999987754
No 147
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.22 E-value=2.6e-11 Score=107.56 Aligned_cols=88 Identities=17% Similarity=0.253 Sum_probs=67.3
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc-----------
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------- 115 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------- 115 (521)
.+..++++.+. +.+.+++++||.|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+
T Consensus 12 ~l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~ 84 (144)
T 1i5g_A 12 NVLKGAAADIA--LPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-----KNFEVMLISWDESAEDFKDYYAKM 84 (144)
T ss_dssp EEEETTEEEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTC
T ss_pred EEEcCCCCEec--HHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhC
Confidence 34555555443 33334689999999999999999999999999999731 2488888887642
Q ss_pred -----------ccHHHHHhCCCCcCceEEEec--CCccc
Q 009987 116 -----------INTNLCDKFSVGHYPMLLWGS--PSKFV 141 (521)
Q Consensus 116 -----------~~~~l~~~f~I~~yPTl~~f~--~g~~~ 141 (521)
.+..++++|+|.++||++++. +|++.
T Consensus 85 ~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 85 PWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp SSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred CccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 246899999999999999984 66544
No 148
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.21 E-value=2.7e-11 Score=108.44 Aligned_cols=104 Identities=16% Similarity=0.254 Sum_probs=79.1
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc--c-----------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA--L----------- 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~--~----------- 114 (521)
+..++++.+. +.+.+ +++||.||++||++|+.+.|.++++++++ + +.++.|+++ .
T Consensus 16 l~~~~g~~~~--l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~--------v~~v~v~~d~~~~~~~~~~~~~~ 83 (154)
T 3ia1_A 16 LLDPKGQPVT--PATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET-G--------VPFYVISREPRDTREVVLEYMKT 83 (154)
T ss_dssp EECTTSCEEC--TTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH-C--------CCEEEEECCTTCCHHHHHHHHTT
T ss_pred EECCCCCEec--hHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc-C--------CeEEEEeCCCcccHHHHHHHHHH
Confidence 3444444333 33444 78999999999999999999999999998 2 566777761 0
Q ss_pred ------------cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 115 ------------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 115 ------------d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+.+..+++.|+|.++|+++++ ++|++ +..+.|..+.++|.++|++..+.
T Consensus 84 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 84 YPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKV-------------VALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEE-------------EEEEESBCCHHHHHHHHHHTTCC
T ss_pred cCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCE-------------EEEEcCCCCHHHHHHHHHhccCc
Confidence 256889999999999998777 56643 34567889999999999988753
No 149
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.21 E-value=3.8e-11 Score=123.44 Aligned_cols=112 Identities=12% Similarity=0.180 Sum_probs=92.7
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.+.+++.+++...+... .++++|.||++||++|+++.|.|+++|+.++ +.+.|+.|||+.+++..+|+.|
T Consensus 116 ~p~v~~~~~~~~~~~~~~~-~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~-------~~i~f~~vd~~~~~~~~~~~~f 187 (361)
T 3uem_A 116 LPLVIEFTEQTAPKIFGGE-IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFIFIDSDHTDNQRILEFF 187 (361)
T ss_dssp SCSEEECSTTTHHHHHSCS-CCEEEEEECCSSSSSHHHHHHHHHHHHGGGT-------TTCEEEEECTTSGGGHHHHHHT
T ss_pred CCcceecCcccHHHHhcCC-CCcEEEEEEeCCchhHHHHHHHHHHHHHHcc-------CceEEEEecCChHHHHHHHHHc
Confidence 4558899999999887654 3567999999999999999999999999997 4599999999644689999999
Q ss_pred CCCc--CceEEEecCCcccCCCCCCCccchhhhhcc---ccCCHHHHHHHHHHhcccC
Q 009987 125 SVGH--YPMLLWGSPSKFVAGSWEPNQEKKEIRALE---DWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 125 ~I~~--yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~---G~~~~~~L~~~i~~~l~~~ 177 (521)
||++ +||+.++..+.. ...|. |.++.+.|.+|+.+.+...
T Consensus 188 gi~~~~~P~~~~~~~~~~-------------~~ky~~~~~~~~~~~l~~fi~~~l~g~ 232 (361)
T 3uem_A 188 GLKKEECPAVRLITLEEE-------------MTKYKPESEELTAERITEFCHRFLEGK 232 (361)
T ss_dssp TCCTTTCSEEEEEECC---------------CCEECCSSCCCCHHHHHHHHHHHHTTC
T ss_pred CCCccCCccEEEEEcCCc-------------ccccCCCccccCHHHHHHHHHHHhcCC
Confidence 9998 999999876421 12233 7899999999999988654
No 150
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.21 E-value=5.7e-11 Score=105.94 Aligned_cols=98 Identities=15% Similarity=0.259 Sum_probs=74.4
Q ss_pred hcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--------------------cHHH
Q 009987 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNL 120 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--------------------~~~l 120 (521)
.+.+++++||.||++||++|+.+.|.++++++.+.+. .+.++.|+++.+. +..+
T Consensus 24 ~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~------~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 97 (152)
T 3gl3_A 24 SDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK------GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQT 97 (152)
T ss_dssp GGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG------TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC------CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchh
Confidence 3335689999999999999999999999999999742 3888888875321 1268
Q ss_pred HHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhcccc--CCHHHHHHHHHHhcccC
Q 009987 121 CDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQTSRS 177 (521)
Q Consensus 121 ~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~--~~~~~L~~~i~~~l~~~ 177 (521)
++.|+|.++||++++ ++|++. ..+.|. .+.+.|.++|++.++..
T Consensus 98 ~~~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~l~~~i~~~~~~~ 144 (152)
T 3gl3_A 98 PRLYGVKGMPTSFLIDRNGKVL-------------LQHVGFRPADKEALEQQILAALGGN 144 (152)
T ss_dssp HHHTTCCSSSEEEEECTTSBEE-------------EEEESCCTTTHHHHHHHHHHHTC--
T ss_pred HHHcCCCCCCeEEEECCCCCEE-------------EEEccCCCcCHHHHHHHHHHHHccc
Confidence 899999999998887 566432 344554 45689999999987653
No 151
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.19 E-value=3.9e-11 Score=106.25 Aligned_cols=101 Identities=10% Similarity=0.099 Sum_probs=72.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHH---HHHHhCCCCCCCCCeEEEEEeecccccc-------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEK---VARLFNGPNAAHPGIILMTRVDCALKIN------- 117 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~---lA~~~~~~~~~~~~~v~~~~VDc~~d~~------- 117 (521)
+..++++.+. +.+.+++++||.|||+||++|+.+.|.+++ +++.+++ ..+.++.|+.+.+..
T Consensus 16 l~~~~g~~~~--l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~------~~~~vi~i~~d~~~~~~~~~~~ 87 (142)
T 3eur_A 16 YTLDSGVKGT--LYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA------KKLKVLSIYPDEELDEWKKHRN 87 (142)
T ss_dssp EEETTSCEEE--TTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT------TSEEEEEEECSSCHHHHHHHGG
T ss_pred EEcCCCCEee--HHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc------CCeEEEEEEcCCCHHHHHHHHH
Confidence 4444444432 444556899999999999999999999999 9999864 348888888753211
Q ss_pred ---------------HHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 118 ---------------TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 118 ---------------~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
..+.+.|+|.++||++++ ++|++.. ...+.++|.++|++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~----------------~~~~~~~l~~~l~e 142 (142)
T 3eur_A 88 DFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLL----------------KDATLQKVEQYLAE 142 (142)
T ss_dssp GSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEE----------------EEECHHHHHHHHHC
T ss_pred hcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEe----------------cCCCHHHHHHHHhC
Confidence 125788999999999887 4554321 12357888888753
No 152
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.18 E-value=1.5e-11 Score=113.75 Aligned_cols=80 Identities=16% Similarity=0.287 Sum_probs=64.1
Q ss_pred ecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHH-H--HHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC--
Q 009987 50 ELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQ-Y--EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-- 124 (521)
Q Consensus 50 ~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~-~--~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f-- 124 (521)
..+++.|+...... +++||+|||+||++|+.+.|+ | .++++.++ +.+.+++||. ++++++.+.|
T Consensus 26 ~~~~ea~~~A~~~~--KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~-------~~fv~ikVD~--de~~~l~~~y~~ 94 (173)
T 3ira_A 26 PWGEEAFEKARKEN--KPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN-------EAFVSIKVDR--EERPDIDNIYMT 94 (173)
T ss_dssp CSSHHHHHHHHHHT--CCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH-------HHCEEEEEET--TTCHHHHHHHHH
T ss_pred CcCHHHHHHHHHhC--CCEEEecccchhHhhccccccccCCHHHHHHHH-------hcCceeeeCC--cccCcHHHHHHH
Confidence 33467788777654 889999999999999999993 3 56777775 3578899997 5678898888
Q ss_pred ------CCCcCceEEEec-CCcc
Q 009987 125 ------SVGHYPMLLWGS-PSKF 140 (521)
Q Consensus 125 ------~I~~yPTl~~f~-~g~~ 140 (521)
||.++||++++. +|+.
T Consensus 95 ~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 95 VCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp HHHHHHSCCCSSEEEEECTTSCE
T ss_pred HHHHHcCCCCCcceeeECCCCCc
Confidence 999999999995 6654
No 153
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.18 E-value=5.8e-11 Score=105.62 Aligned_cols=77 Identities=19% Similarity=0.349 Sum_probs=62.2
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc----------------------cc
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------IN 117 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------------~~ 117 (521)
+.+.+++++||.|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+ .+
T Consensus 23 l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~ 97 (146)
T 1o8x_A 23 VKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHES-----KNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAV 97 (146)
T ss_dssp GGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHH
T ss_pred HHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhc-----CCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHH
Confidence 34445689999999999999999999999999999731 2488888887642 24
Q ss_pred HHHHHhCCCCcCceEEEec--CCccc
Q 009987 118 TNLCDKFSVGHYPMLLWGS--PSKFV 141 (521)
Q Consensus 118 ~~l~~~f~I~~yPTl~~f~--~g~~~ 141 (521)
..++++|+|.++||++++. +|++.
T Consensus 98 ~~~~~~~~v~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 98 QKLSKHFNVESIPTLIGVDADSGDVV 123 (146)
T ss_dssp HHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHHhCCCCCCEEEEEECCCCeEE
Confidence 6899999999999999985 66543
No 154
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.17 E-value=6.2e-11 Score=106.96 Aligned_cols=106 Identities=16% Similarity=0.363 Sum_probs=77.1
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------- 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------- 114 (521)
+..+++..+. +.+.+++++||.||++||++|+.+.|.++++++++.+ ..+.++.|+++.
T Consensus 26 l~~~~g~~~~--l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 97 (158)
T 3hdc_A 26 LPTLSGENKS--LAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK------GDLVVLAVNVEKRFPEKYRRAPVSF 97 (158)
T ss_dssp EECTTSCEEE--SGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST------TSEEEEEEECSSSCCGGGGGCCCSC
T ss_pred eEcCCCCEEe--hHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc------CCeEEEEEeCCHHHHHHHHHcCCCc
Confidence 4445554443 3333468999999999999999999999999999864 348999999853
Q ss_pred ----cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhcccc--CCHHHHHHHHHHhc
Q 009987 115 ----KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW--QTADGLLTWINKQT 174 (521)
Q Consensus 115 ----d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~--~~~~~L~~~i~~~l 174 (521)
+.+..+++.|+|.++|+++++ ++|++. ..+.|. .+.+++++.+.+..
T Consensus 98 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~-------------~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 98 NFLSDATGQVQQRYGANRLPDTFIVDRKGIIR-------------QRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEEECTTSHHHHHTTCCSSSEEEEECTTSBEE-------------EEEESCCCTTSHHHHHHHHTTC
T ss_pred eEEECchHHHHHHhCCCCcceEEEEcCCCCEE-------------EEEeCCCccchHHHHHHHHhhc
Confidence 235789999999999997776 566433 334454 45566777666544
No 155
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=9.9e-11 Score=104.57 Aligned_cols=91 Identities=14% Similarity=0.249 Sum_probs=71.0
Q ss_pred cCCCCeEEEEEecCCChh--HhhhhHHHHHHHHHh-CCCCCCCCCeEEEEEeeccccc----------------------
Q 009987 62 DTPATYAVVEFFANWCPA--CRNYKPQYEKVARLF-NGPNAAHPGIILMTRVDCALKI---------------------- 116 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg~--C~~~~P~~~~lA~~~-~~~~~~~~~~v~~~~VDc~~d~---------------------- 116 (521)
+.+++++||.||++||++ |+.+.|.+.++++++ .+ ..+.++.|+++.+.
T Consensus 30 ~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 103 (150)
T 3fw2_A 30 AFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKN------KYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGG 103 (150)
T ss_dssp TTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTC------SSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCG
T ss_pred hhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccC------CCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcc
Confidence 445689999999999999 999999999999999 53 24889889875432
Q ss_pred -cHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 -NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 -~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+..+++.|+|.++|+++++ ++|++.. .+ .+.+++.+.|++.+
T Consensus 104 ~~~~~~~~~~v~~~P~~~lid~~G~i~~-------------~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 104 LNSEVAKQYSIYKIPANILLSSDGKILA-------------KN---LRGEELKKKIENIV 147 (150)
T ss_dssp GGCHHHHHTTCCSSSEEEEECTTSBEEE-------------ES---CCHHHHHHHHHHHH
T ss_pred cchHHHHHcCCCccCeEEEECCCCEEEE-------------cc---CCHHHHHHHHHHHH
Confidence 3479999999999999998 5665432 11 26777777777654
No 156
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.16 E-value=6.7e-11 Score=109.45 Aligned_cols=112 Identities=11% Similarity=0.181 Sum_probs=77.7
Q ss_pred ceec--CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC-
Q 009987 48 AVEL--NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF- 124 (521)
Q Consensus 48 v~~L--~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f- 124 (521)
+..+ +++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+.+....+.+.|+.|+++.+ +.+..++|
T Consensus 42 l~~~~~~g~~~~--l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~ 118 (183)
T 3lwa_A 42 GDSLMEEGTQIN--LSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFV 118 (183)
T ss_dssp EEBSSSTTCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHH
T ss_pred ccccccCCcEec--HHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHH
Confidence 4444 444433 34445689999999999999999999999999998743200012349999998531 44444444
Q ss_pred ------------------------CCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 125 ------------------------SVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ------------------------~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|.++|+++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 119 ~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 119 TDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRP-------------AAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp HHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCE-------------EEEECSCCCHHHHHHHHHHHHH
T ss_pred HHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcE-------------EEEEcCCCCHHHHHHHHHHHHh
Confidence 68999976655 56643 2456788899999999987653
No 157
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.16 E-value=8.7e-11 Score=107.40 Aligned_cols=76 Identities=21% Similarity=0.355 Sum_probs=61.3
Q ss_pred hcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc----------------------H
Q 009987 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN----------------------T 118 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~----------------------~ 118 (521)
.+.+++++||+|||+||++|+.+.|.++++++++.+. ..+.|+.|+++.+.. .
T Consensus 44 ~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~-----~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (165)
T 3s9f_A 44 DSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDS-----KNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVE 118 (165)
T ss_dssp GGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred HHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccC-----CCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHH
Confidence 3345689999999999999999999999999999742 247888888754322 7
Q ss_pred HHHHhCCCCcCceEEEec-C-Cccc
Q 009987 119 NLCDKFSVGHYPMLLWGS-P-SKFV 141 (521)
Q Consensus 119 ~l~~~f~I~~yPTl~~f~-~-g~~~ 141 (521)
.+++.|+|.++||++++. + |++.
T Consensus 119 ~l~~~~~v~~~Pt~~lid~~~G~iv 143 (165)
T 3s9f_A 119 ALTKKYSVESIPTLIGLNADTGDTV 143 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHcCCCCCCEEEEEeCCCCEEE
Confidence 899999999999999985 3 6554
No 158
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.15 E-value=7e-11 Score=104.49 Aligned_cols=76 Identities=17% Similarity=0.331 Sum_probs=61.4
Q ss_pred hcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc----------------------ccH
Q 009987 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------INT 118 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------------~~~ 118 (521)
.+.+++++||.|||+||++|+.+.|.++++++++.+. ..+.++.|+++.+ .+.
T Consensus 24 ~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-----~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (144)
T 1o73_A 24 GSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVA-----KNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVS 98 (144)
T ss_dssp GGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----TTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHH
T ss_pred HHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccC-----CCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHH
Confidence 3445689999999999999999999999999998632 2478888887542 246
Q ss_pred HHHHhCCCCcCceEEEec--CCccc
Q 009987 119 NLCDKFSVGHYPMLLWGS--PSKFV 141 (521)
Q Consensus 119 ~l~~~f~I~~yPTl~~f~--~g~~~ 141 (521)
.++++|+|.++||++++. +|++.
T Consensus 99 ~~~~~~~v~~~Pt~~lid~~~G~i~ 123 (144)
T 1o73_A 99 ELGKTFGVESIPTLITINADTGAII 123 (144)
T ss_dssp HHHHHHTCCSSSEEEEEETTTCCEE
T ss_pred HHHHHcCCCCCCEEEEEECCCCeEE
Confidence 799999999999999986 66543
No 159
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.14 E-value=1.3e-10 Score=105.42 Aligned_cols=103 Identities=16% Similarity=0.291 Sum_probs=76.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------ 115 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------ 115 (521)
+..+++..+. +.+.+++++||.||++||++|+.+.|.++++++.+. .+.|+.|+++..
T Consensus 22 l~~~~g~~~~--l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--------~v~vv~i~~d~~~~~~~~~~~~~~ 91 (165)
T 3ha9_A 22 LTTIDGEVIS--LNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--------EISVIAIDFWTAEALKALGLNKPG 91 (165)
T ss_dssp EEBTTSCEEC--GGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--------TEEEEEEECCSHHHHHHHTCCSTT
T ss_pred eecCCCCEee--HHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--------CcEEEEEEeccccccccccccccc
Confidence 3344444333 344456899999999999999999999999999985 388888887510
Q ss_pred ----cc----------------------HHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccC-CHHHHH
Q 009987 116 ----IN----------------------TNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ-TADGLL 167 (521)
Q Consensus 116 ----~~----------------------~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~-~~~~L~ 167 (521)
++ ..+++.|+|.++||++++ ++|++. . .|.. +.+.|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~-------------~--~g~~~~~~~l~ 156 (165)
T 3ha9_A 92 YPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVL-------------Y--AGTTPSLGELE 156 (165)
T ss_dssp SCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEE-------------E--EEESCCHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEE-------------E--eCCCCCHHHHH
Confidence 12 378999999999999998 555432 1 5777 899999
Q ss_pred HHHHHhcc
Q 009987 168 TWINKQTS 175 (521)
Q Consensus 168 ~~i~~~l~ 175 (521)
+.|++.++
T Consensus 157 ~~l~~l~~ 164 (165)
T 3ha9_A 157 SVIKSVQG 164 (165)
T ss_dssp HHHHHC--
T ss_pred HHHHHHhc
Confidence 99987653
No 160
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.14 E-value=9.9e-11 Score=105.31 Aligned_cols=87 Identities=6% Similarity=0.047 Sum_probs=66.5
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc------------------H---HHHH
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN------------------T---NLCD 122 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~------------------~---~l~~ 122 (521)
+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++.+.. . .+.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ------GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYIS 107 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG------TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC------CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHH
Confidence 4588999999999999999999999999999742 38899998853221 1 2889
Q ss_pred hCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHH
Q 009987 123 KFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTW 169 (521)
Q Consensus 123 ~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~ 169 (521)
.|+|.++||++++ ++|++. ..+.|..+.++.+.-
T Consensus 108 ~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 108 LYNVTNLPSVFLVNRNNELS-------------ARGENIKDLDEAIKK 142 (152)
T ss_dssp HHTCCSCSEEEEEETTTEEE-------------EETTTCSCHHHHHHH
T ss_pred HcCcccCceEEEECCCCeEE-------------EecCCHHHHHHHHHH
Confidence 9999999999988 566443 345666666555443
No 161
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.13 E-value=6.3e-11 Score=105.99 Aligned_cols=89 Identities=16% Similarity=0.237 Sum_probs=68.9
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------------------cccHHHHHh
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------KINTNLCDK 123 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------------------d~~~~l~~~ 123 (521)
+++++|.||++||++|+.+.|.+++++++ +.+.++.|+++. +.+..+++.
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD---------KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIE 112 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC---------TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHH
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc---------CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHh
Confidence 57899999999999999999999988764 136777777531 345678999
Q ss_pred CCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 124 FSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 124 f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
|+|.++||++++ ++|++ +..+.|..+.+.|.++|++.+.
T Consensus 113 ~~v~~~P~~~~id~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 113 WGVYGVPETFVVGREGTI-------------VYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp TTCCSSCEEEEECTTSBE-------------EEEEESCCCHHHHHHTHHHHHH
T ss_pred cCcCccCeEEEEcCCCCE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 999999976665 56643 2456788899999998887654
No 162
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.13 E-value=9.2e-11 Score=104.79 Aligned_cols=107 Identities=18% Similarity=0.319 Sum_probs=75.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------ 115 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------ 115 (521)
+..+++..+. +.+.+++++||.||++||++|+.+.|.++++++.+.+ ..+.++.|+++.+
T Consensus 13 l~~~~g~~~~--l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~------~~~~~v~v~~d~~~~~~~~~~~~~~ 84 (154)
T 3kcm_A 13 LNTLNGEVVK--LSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG------KPFRMLCVSIDEGGKVAVEEFFRKT 84 (154)
T ss_dssp EECTTSCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT------SSEEEEEEECCTTHHHHHHHHHHHH
T ss_pred EEcCCCCEEe--hhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc------CCeEEEEEEcCCcchHHHHHHHHHc
Confidence 3344444333 2333468999999999999999999999999999964 2488888887532
Q ss_pred ---------ccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccC--CHHHHHHHHHHhcc
Q 009987 116 ---------INTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQTS 175 (521)
Q Consensus 116 ---------~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~--~~~~L~~~i~~~l~ 175 (521)
.+..+++.|+|.++|+++++ ++|++. ..+.|.. +.+++.++|++...
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 85 GFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVIL-------------KKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp CCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEE-------------EEEESCCCTTSHHHHHHHHTC--
T ss_pred CCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEE-------------EEEcCCCccccHHHHHHHHHHHH
Confidence 12348899999999976665 566432 3455554 66789998876543
No 163
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.11 E-value=7.1e-11 Score=107.47 Aligned_cols=89 Identities=12% Similarity=0.139 Sum_probs=67.8
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc---------------------ccccHHHHH
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTNLCD 122 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~l~~ 122 (521)
+++++||.||++||++|+.+.|.+++++++ + +.++.|+++ .+.+..+++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-~---------v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 119 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-G---------IRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGL 119 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-T---------CCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC-C---------CEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHH
Confidence 458899999999999999999999999875 1 456666642 245668999
Q ss_pred hCCCCcCceEEE-ecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 123 KFSVGHYPMLLW-GSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 123 ~f~I~~yPTl~~-f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+|+|.++|++++ .++|++ +..+.|..+.+.+.++|++.+.
T Consensus 120 ~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 120 DLGVYGAPETFLIDGNGII-------------RYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHTCCSSSEEEEECTTSBE-------------EEEEESCCCHHHHHHTTHHHHH
T ss_pred HcCccccCEEEEECCCCeE-------------EEEEeCCCCHHHHHHHHHHHHH
Confidence 999999995554 456643 2456788888999888877653
No 164
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.11 E-value=2.9e-11 Score=120.68 Aligned_cols=83 Identities=18% Similarity=0.386 Sum_probs=64.4
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc----cccHHHHHhCCCCcC
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----KINTNLCDKFSVGHY 129 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----d~~~~l~~~f~I~~y 129 (521)
..+.+.+.+. .+|+|||||||||++++|.|+++++++. .+||+. ++++++|++|+|+++
T Consensus 190 ~~la~~l~~~----~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------------~Vd~d~~d~~~~~~~la~~~gI~~v 252 (291)
T 3kp9_A 190 VGLAAHLRQI----GGTMYGAYWCPHCQDQKELFGAAFDQVP-------------YVECSPNGPGTPQAQECTEAGITSY 252 (291)
T ss_dssp HHHHHHHHHT----TCEEEECTTCHHHHHHHHHHGGGGGGSC-------------EEESCSSCSSSCCCHHHHTTTCCST
T ss_pred HHHHHHhCCC----CEEEEECCCCHHHHHHHHHHHHHHHHcC-------------EEEEeecCchhhHHHHHHHcCCccc
Confidence 4555666554 2799999999999999999999986542 355541 337899999999999
Q ss_pred ceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHH
Q 009987 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (521)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~ 171 (521)
||+++ +|+ .+.|.++.++|.+|++
T Consensus 253 PT~~i--~G~----------------~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 253 PTWII--NGR----------------TYTGVRSLEALAVASG 276 (291)
T ss_dssp TEEEE--TTE----------------EEESCCCHHHHHHHTC
T ss_pred CeEEE--CCE----------------EecCCCCHHHHHHHHC
Confidence 99655 441 3789999999999884
No 165
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.10 E-value=1.9e-10 Score=106.79 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=76.8
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------------------
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------- 114 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------- 114 (521)
+.+.+++++||.||++||++|+.+.|.++++++++.+ . +.++.|+++.
T Consensus 28 l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~------~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~ 100 (188)
T 2cvb_A 28 LSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRG------K-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPY 100 (188)
T ss_dssp GGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTT------T-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCE
T ss_pred HHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhc------C-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceE
Confidence 3444568999999999999999999999999999863 3 8888898732
Q ss_pred --cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 115 --KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 115 --d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+.+..+++.|+|.++||++++ ++|++...+.. .....+.|..+.++|.+.|++.+..
T Consensus 101 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~-----~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 101 LLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRV-----NDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp EECSSSHHHHHTTCCEESEEEEECTTCBEEEEECS-----SSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred EECCcchHHHHcCCCCCCeEEEECCCCcEEEEEec-----CCccccccccCHHHHHHHHHHHHcC
Confidence 335678999999999999888 56654321000 0000133555788999999887753
No 166
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.09 E-value=3.3e-10 Score=104.92 Aligned_cols=108 Identities=13% Similarity=0.250 Sum_probs=77.7
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc---ccHHHHHhC
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK---INTNLCDKF 124 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d---~~~~l~~~f 124 (521)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+ ..+.++.|+++.+ ....+++++
T Consensus 45 l~~~~G~~~~--l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d~~~~~~~~~~~~~~ 116 (186)
T 1jfu_A 45 FEDADGKPKK--LSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSG------PNFEVVAINIDTRDPEKPKTFLKEA 116 (186)
T ss_dssp EECTTSCEEE--GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCB------TTEEEEEEECCCSCTTHHHHHHHHT
T ss_pred eEcCCCCEee--HHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhcc------CCcEEEEEECCCCCHHHHHHHHHHc
Confidence 4444444333 3333568999999999999999999999999999963 3488888887532 225677888
Q ss_pred CCC-----------------------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCC--HHHHHHHHHHhccc
Q 009987 125 SVG-----------------------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQT--ADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~-----------------------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~--~~~L~~~i~~~l~~ 176 (521)
++. ++|+++++ ++|++. ..+.|..+ .+++.++|++.+..
T Consensus 117 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 117 NLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEI-------------ATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp TCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEE-------------EEEESCCCTTSHHHHHHHHHHHC-
T ss_pred CCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEE-------------EEEecCCccCHHHHHHHHHHHhcc
Confidence 875 89988887 566433 34556543 78899999887753
No 167
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.09 E-value=1.5e-10 Score=98.38 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=64.1
Q ss_pred eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCCC
Q 009987 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWE 146 (521)
Q Consensus 67 ~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~ 146 (521)
..++.||++||++|+.+.|.++++++++. +.+..||++ +++++..+|+++ +||+++|.+|+..
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---------i~~~~vDId--~d~~l~~~ygv~-VP~l~~~~dG~~v----- 92 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---------FELEVINID--GNEHLTRLYNDR-VPVLFAVNEDKEL----- 92 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---------CCCEEEETT--TCHHHHHHSTTS-CSEEEETTTTEEE-----
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---------CeEEEEECC--CCHHHHHHhCCC-CceEEEEECCEEE-----
Confidence 46999999999999999999999999863 678889984 578899999998 9999998776432
Q ss_pred CCccchhhhhccccCCHHHHHHHH
Q 009987 147 PNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 147 ~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
..|..+.+.|.+||
T Consensus 93 ----------~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 93 ----------CHYFLDSDVIGAYL 106 (107)
T ss_dssp ----------ECSSCCCHHHHHHH
T ss_pred ----------EecCCCHHHHHHHh
Confidence 24667888888876
No 168
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.08 E-value=1.6e-10 Score=106.78 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=70.4
Q ss_pred hcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc---------------------ccccHH
Q 009987 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA---------------------LKINTN 119 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~---------------------~d~~~~ 119 (521)
.+.+++++||.||++||++|+.+.|.+++++++ + +.++.|+++ .+.+..
T Consensus 54 ~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~--------v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~ 123 (176)
T 3kh7_A 54 ADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G--------VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGT 123 (176)
T ss_dssp GGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T--------CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCH
T ss_pred HHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C--------CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcch
Confidence 334468899999999999999999999999875 1 566666642 134567
Q ss_pred HHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 120 LCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 120 l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+++.|+|.++|+++++ ++|++ +..+.|..+.+.+.++|.+.+.
T Consensus 124 ~~~~~~v~~~P~~~lid~~G~i-------------~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 124 LGLDLGVYGAPETYLIDKQGII-------------RHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHHHTCCSSCEEEEECTTCBE-------------EEEEESCCCHHHHHHHTHHHHH
T ss_pred HHHHcCCCCCCeEEEECCCCeE-------------EEEEcCCCCHHHHHHHHHHHHH
Confidence 8999999999977766 55643 3456788899999888877654
No 169
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.08 E-value=9.5e-11 Score=109.42 Aligned_cols=101 Identities=11% Similarity=0.112 Sum_probs=74.5
Q ss_pred CC-eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------------------------cc
Q 009987 65 AT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------------------------KI 116 (521)
Q Consensus 65 ~~-~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------------------------d~ 116 (521)
++ ++||.||++||++|+.+.|.++++++++.+. .+.++.|+++. +.
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~ 118 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK------GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDE 118 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG------TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECS
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECC
Confidence 45 5999999999999999999999999999742 37888888742 34
Q ss_pred cHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhh-ccccCCHHHHHHHHHHhccc
Q 009987 117 NTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRA-LEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~-~~G~~~~~~L~~~i~~~l~~ 176 (521)
+..+++.|+|.++||++++ ++|++...... ..... +.|..+.++|.+.|++.+..
T Consensus 119 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~-----~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 119 TQEVAKAYDAACTPDFYIFDRDLKCVYRGQL-----DDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp SCHHHHHHTCCEESEEEEEETTCBEEEEECS-----SSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred chHHHHHhCCCCCCeEEEEcCCCeEEEcccc-----CcccccccCccCHHHHHHHHHHHHcC
Confidence 5678999999999999887 56654321000 00000 35667889999999887753
No 170
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.07 E-value=3e-10 Score=116.75 Aligned_cols=97 Identities=10% Similarity=0.099 Sum_probs=77.5
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------------------
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------- 114 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------- 114 (521)
+.+.+++++||+||++||++|+.+.|.++++++++.+ ..+.|+.|+++.
T Consensus 77 Lsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~ 150 (352)
T 2hyx_A 77 LKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIAL 150 (352)
T ss_dssp GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc------CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEe
Confidence 3344568999999999999999999999999999974 248899998731
Q ss_pred cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 115 KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 115 d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+.+..+++.|+|.++||++++ ++|++ +..+.|..+.++|.++|++.+.
T Consensus 151 D~~~~l~~~ygV~~~Pt~~lID~~G~I-------------v~~~~G~~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 151 DNNYATWTNYRNRYWPAEYLIDATGTV-------------RHIKFGEGDYNVTETLVRQLLN 199 (352)
T ss_dssp CTTSHHHHHTTCCEESEEEEECTTSBE-------------EEEEESBCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHcCCCccCEEEEEeCCCeE-------------EEEEcCCCCHHHHHHHHHHHHh
Confidence 234578999999999998887 56643 3456788889999999988764
No 171
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.05 E-value=2.7e-10 Score=100.86 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=59.3
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----------------------
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI----------------------- 116 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~----------------------- 116 (521)
+.+.+++++||.|||+||++|+.+.|.++++++++.+. .+.++.|+.+.+.
T Consensus 27 l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~ 100 (143)
T 4fo5_A 27 FHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD------KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLG 100 (143)
T ss_dssp SCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT------TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTG
T ss_pred HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC------CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccc
Confidence 34445789999999999999999999999999998642 4888888775221
Q ss_pred -cHHHHHhCCCCcCceEEEec-CCcc
Q 009987 117 -NTNLCDKFSVGHYPMLLWGS-PSKF 140 (521)
Q Consensus 117 -~~~l~~~f~I~~yPTl~~f~-~g~~ 140 (521)
+..+.+.|+|.++|+++++. +|++
T Consensus 101 ~~~~~~~~~~v~~~P~~~lid~~G~i 126 (143)
T 4fo5_A 101 KESELYKKYDLRKGFKNFLINDEGVI 126 (143)
T ss_dssp GGSHHHHHTTGGGCCCEEEECTTSBE
T ss_pred cchHHHHHcCCCCCCcEEEECCCCEE
Confidence 13688999999999888774 6644
No 172
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.61 E-value=2.2e-11 Score=107.36 Aligned_cols=74 Identities=18% Similarity=0.355 Sum_probs=58.3
Q ss_pred CCC-eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----------------------cHH
Q 009987 64 PAT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----------------------NTN 119 (521)
Q Consensus 64 ~~~-~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----------------------~~~ 119 (521)
+++ +++|.|||+||++|+.+.|.++++++++++.+ ..+.++.|+++.+. +..
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~----~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDS----APFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASN 99 (143)
Confidence 346 89999999999999999999999999885321 34778888875321 147
Q ss_pred HHHhCCCCcCceEEEec-CCccc
Q 009987 120 LCDKFSVGHYPMLLWGS-PSKFV 141 (521)
Q Consensus 120 l~~~f~I~~yPTl~~f~-~g~~~ 141 (521)
+++.|+|.++||++++. +|++.
T Consensus 100 ~~~~~~v~~~P~~~lid~~G~i~ 122 (143)
T 2lus_A 100 VTAKYGITGIPALVIVKKDGTLI 122 (143)
Confidence 89999999999999985 66544
No 173
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.03 E-value=4.8e-10 Score=101.18 Aligned_cols=98 Identities=9% Similarity=0.104 Sum_probs=72.5
Q ss_pred CCCCeEEEEEecCCChh-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--------------------------
Q 009987 63 TPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------------- 115 (521)
Q Consensus 63 ~~~~~vlV~FyA~WCg~-C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-------------------------- 115 (521)
.+++++||.||++||++ |+...|.++++++++.+.. ....+.++.|+++.+
T Consensus 21 ~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d 98 (164)
T 2ggt_A 21 YLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSIT--TLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTRE 98 (164)
T ss_dssp GTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSS--SSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHH
T ss_pred cCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhcc--CCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHH
Confidence 34689999999999998 9999999999999986310 002478888887531
Q ss_pred ccHHHHHhCCCCcCc---------------eEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 116 INTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 116 ~~~~l~~~f~I~~yP---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
....+.+.|+|.+.| +++++ ++|++. ..+.|..+.++|.+.|.+.+.
T Consensus 99 ~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~-------------~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 99 EVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFL-------------DYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEE-------------EEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEE-------------EEeCCCCCHHHHHHHHHHHHH
Confidence 123588999999999 55554 566443 456777889999999887764
No 174
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.03 E-value=5.3e-10 Score=101.38 Aligned_cols=106 Identities=10% Similarity=0.177 Sum_probs=78.6
Q ss_pred cccHHHHHhcC--CCCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCC
Q 009987 53 ATNFDAVLRDT--PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVG 127 (521)
Q Consensus 53 ~~~f~~~l~~~--~~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~ 127 (521)
..+|++.+... .++++||+||++||..|+.|.... .++++.++ ..+.++.+|.+.+++..+.++|+|.
T Consensus 28 ~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~-------~~fv~v~~d~~~~~~~~l~~~y~v~ 100 (153)
T 2dlx_A 28 KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR-------EHFIFWQVYHDSEEGQRYIQFYKLG 100 (153)
T ss_dssp CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHH-------HTEEEEEEESSSHHHHHHHHHHTCC
T ss_pred ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHH-------cCeEEEEEecCCHhHHHHHHHcCCC
Confidence 46788876432 368999999999999999997554 44555553 2378889998766678899999999
Q ss_pred cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 128 HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 128 ~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
++||++++.+.. + +.+..+.| .+++++++.|++.+...
T Consensus 101 ~~P~~~fld~~~---G--------~~l~~~~g-~~~~~fl~~L~~~l~~~ 138 (153)
T 2dlx_A 101 DFPYVSILDPRT---G--------QKLVEWHQ-LDVSSFLDQVTGFLGEH 138 (153)
T ss_dssp SSSEEEEECTTT---C--------CCCEEESS-CCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeCCC---C--------cEeeecCC-CCHHHHHHHHHHHHHhc
Confidence 999999985420 0 22333445 89999999998877544
No 175
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.01 E-value=2.5e-10 Score=93.41 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=59.4
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCCCCC
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPN 148 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~ 148 (521)
++.||++|||+|+.+.|.+++++.++ +..||+ ++++++.++|+++ +||+++ .+|+..
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------------~~~vdi--d~~~~l~~~~g~~-vPtl~~-~~G~~v------- 59 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------------FFSVFI--DDDAALESAYGLR-VPVLRD-PMGREL------- 59 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------------EEEEEC--TTCHHHHHHHTTT-CSEEEC-TTCCEE-------
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------------eEEEEC--CCCHHHHHHhCCC-cCeEEE-ECCEEE-------
Confidence 78999999999999999998865431 467887 4678999999999 999987 665321
Q ss_pred ccchhhhhccccCCHHHHHHHHHHhc
Q 009987 149 QEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 149 ~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.|..+.+.|.++|++.+
T Consensus 60 ---------~g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 60 ---------DWPFDAPRLRAWLDAAP 76 (87)
T ss_dssp ---------ESCCCHHHHHHHHHTCC
T ss_pred ---------eCCCCHHHHHHHHHHHH
Confidence 26788899999997654
No 176
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.00 E-value=7.6e-10 Score=105.93 Aligned_cols=118 Identities=12% Similarity=0.123 Sum_probs=81.1
Q ss_pred cceecCcccHHHHHhcCCCC-eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------
Q 009987 47 HAVELNATNFDAVLRDTPAT-YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~-~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (521)
.+..++++.+. +.+..++ ++||.||++||++|+.+.|.++++++++.+. .+.|+.|+++.
T Consensus 42 ~l~~~~G~~v~--l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~d~~~~ 113 (218)
T 3u5r_E 42 VLPDAGGNLFT--LAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQ------GLAVVAINSNDAQAFPEETLER 113 (218)
T ss_dssp CEECTTCCEEC--GGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTT------TEEEEEEECSCTTTCGGGSHHH
T ss_pred EeECCCCCEEe--HHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhC------CcEEEEEECCcccccccCCHHH
Confidence 34445554443 3333456 4999999999999999999999999999752 38888898731
Q ss_pred ----------------cccHHHHHhCCCCcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 115 ----------------KINTNLCDKFSVGHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 115 ----------------d~~~~l~~~f~I~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
|.+..+++.|+|.++|+++++ ++|++...+.... . .....+..+.++|.+.|++.+..
T Consensus 114 ~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i~~~g~~d~---~-~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 114 VGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRLVYHGQFDD---A-RPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBEEEEECSSS---C-CTTSCCCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcEEEeccccc---c-ccccccccCHHHHHHHHHHHHcC
Confidence 335689999999999999988 6675542100000 0 00122345678899999887753
No 177
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.98 E-value=6.8e-10 Score=101.61 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=71.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------cccH
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~~~ 118 (521)
+..++++.+. +.+.+++++||.|||+||++|+ ..|.++++++++.+. .+.++.|+++. +...
T Consensus 17 l~d~~G~~~~--l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~d~~~~~~ 87 (171)
T 3cmi_A 17 PVDKKGQPFP--FDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDE------GFTIIGFPCNQFGHQEPGSDEEIA 87 (171)
T ss_dssp CBBTTSCBCC--GGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGG------TEEEEEEEECSCC-----------
T ss_pred EEcCCCCEec--HHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccC------CeEEEEEECcccCCCCCCCHHHHH
Confidence 3344444333 3333568999999999999999 999999999999742 38888887631 1111
Q ss_pred HHH------------------------------HhCCCCcCc------eEEEe-cCCcccCCCCCCCccchhhhhccccC
Q 009987 119 NLC------------------------------DKFSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ 161 (521)
Q Consensus 119 ~l~------------------------------~~f~I~~yP------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~ 161 (521)
+.. +.|+|.++| +++++ ++|++. ..+.|..
T Consensus 88 ~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~-------------~~~~g~~ 154 (171)
T 3cmi_A 88 QFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVY-------------ERYSSLT 154 (171)
T ss_dssp -------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEE-------------EEECTTS
T ss_pred HHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEE-------------EEeCCCC
Confidence 222 247888999 65555 566443 4466778
Q ss_pred CHHHHHHHHHHhcc
Q 009987 162 TADGLLTWINKQTS 175 (521)
Q Consensus 162 ~~~~L~~~i~~~l~ 175 (521)
+.+.|.+.|++.+.
T Consensus 155 ~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 155 KPSSLSETIEELLK 168 (171)
T ss_dssp CGGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888887764
No 178
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.97 E-value=1.3e-09 Score=99.17 Aligned_cols=100 Identities=10% Similarity=0.123 Sum_probs=73.9
Q ss_pred hcCCCCeEEEEEecCCChh-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc------------------------
Q 009987 61 RDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~-C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (521)
.+.+++++||.||++||++ |+.+.|.++++++++.+.. ....+.++.|+++.+
T Consensus 22 ~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~--~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~ 99 (171)
T 2rli_A 22 ADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEP--GLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGS 99 (171)
T ss_dssp TTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHST--TSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECC
T ss_pred HHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhcc--CCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCC
Confidence 3345689999999999998 9999999999999985210 002488888887521
Q ss_pred --ccHHHHHhCCCCcCc---------------eEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 116 --INTNLCDKFSVGHYP---------------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 116 --~~~~l~~~f~I~~yP---------------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
....+++.|+|.+.| +++++ ++|++. ..+.|..+.++|.+.|++.+.
T Consensus 100 ~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~-------------~~~~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 100 TKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFT-------------DYYGRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp HHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEE-------------EEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEE-------------EEECCCCCHHHHHHHHHHHHH
Confidence 123688999999988 66555 566443 446778889999999988764
No 179
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.95 E-value=2.4e-09 Score=104.35 Aligned_cols=98 Identities=9% Similarity=0.111 Sum_probs=77.8
Q ss_pred ccHHHHHhcCCCCeEEEEEecCC--ChhHhhhhHHHHHHHHHhCCCCCCCCCe--EEEEEeeccccccHHHHHhCCCCcC
Q 009987 54 TNFDAVLRDTPATYAVVEFFANW--CPACRNYKPQYEKVARLFNGPNAAHPGI--ILMTRVDCALKINTNLCDKFSVGHY 129 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~W--Cg~C~~~~P~~~~lA~~~~~~~~~~~~~--v~~~~VDc~~d~~~~l~~~f~I~~y 129 (521)
+.|+..+... +++++|.||++| |++|+.+.|.++++|+..... .++ |.|+.+|+ ++++++|++|||+++
T Consensus 15 ~ql~~~~~~~-~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~----~~~~~v~~~~vd~--d~~~~~~~~~gv~~~ 87 (243)
T 2hls_A 15 RELRETLAEM-VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTR----NGGKLLKLNVYYR--ESDSDKFSEFKVERV 87 (243)
T ss_dssp HHHHHHHTTC-CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEE----TTEESEEEEEEET--TTTHHHHHHTTCCSS
T ss_pred HHHHHHHHhC-CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCC----CCCceeEEEEecC--CcCHHHHHhcCCCcC
Confidence 5566666554 467899999999 999999999999999884210 133 99999998 468899999999999
Q ss_pred ceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
||+++| +| ...|.|.++.+.+.+|+...+
T Consensus 88 Pt~~i~-~g---------------~~~~~G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 88 PTVAFL-GG---------------EVRWTGIPAGEEIRALVEVIM 116 (243)
T ss_dssp SEEEET-TT---------------TEEEESCCCTTHHHHHHHHHH
T ss_pred CEEEEE-CC---------------ceeEcCCCcHHHHHHHHHHHH
Confidence 999998 43 134777778888888887754
No 180
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.95 E-value=1.3e-09 Score=98.98 Aligned_cols=95 Identities=7% Similarity=0.046 Sum_probs=68.0
Q ss_pred cCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------cccHHHHH-hC-------
Q 009987 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINTNLCD-KF------- 124 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~~~~l~~-~f------- 124 (521)
+.+++++||.||++||++|+.+.|.++++++++.+. .+.++.|+++. +...+.++ +|
T Consensus 29 ~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (170)
T 2p5q_A 29 IFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ------GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIF 102 (170)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBB
T ss_pred HhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC------CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeE
Confidence 335689999999999999999999999999999742 38899998742 11233344 44
Q ss_pred ----------------------CC--CcCc---eEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 125 ----------------------SV--GHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ----------------------~I--~~yP---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+| .++| +++++ ++|++ +..+.|..+.++|.+.|++.+.
T Consensus 103 ~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i-------------~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 103 DKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV-------------VDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE-------------EEEECTTSCGGGGHHHHHHHTT
T ss_pred eeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCE-------------EEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5567 55554 55543 3456777888889998888764
No 181
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.94 E-value=1.3e-09 Score=101.79 Aligned_cols=107 Identities=5% Similarity=-0.002 Sum_probs=73.9
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------cccH
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~~~ 118 (521)
+..++++.+. +.+.+++++||.|||+||++|+.+.|.++++++++.+. .+.++.|+++. ++..
T Consensus 33 l~~~~G~~~~--l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~ 104 (190)
T 2vup_A 33 VLDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPCNQFGGQEPGNEEEIK 104 (190)
T ss_dssp CBBTTSSBCC--GGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TCEEEEEECCCSTTCCCSCHHHHH
T ss_pred EEcCCCCEEE--HHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC------CeEEEEEEcCccCCCCCCCHHHHH
Confidence 3444444433 33345689999999999999999999999999999742 37888888741 1112
Q ss_pred HHH-Hh-----------------------------CCCCcCc------eEEEe-cCCcccCCCCCCCccchhhhhccccC
Q 009987 119 NLC-DK-----------------------------FSVGHYP------MLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQ 161 (521)
Q Consensus 119 ~l~-~~-----------------------------f~I~~yP------Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~ 161 (521)
+.+ ++ |+|.++| +++++ ++|++ +..+.|..
T Consensus 105 ~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i-------------~~~~~g~~ 171 (190)
T 2vup_A 105 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP-------------VERFSPGA 171 (190)
T ss_dssp HHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE-------------EEEECTTC
T ss_pred HHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE-------------EEEECCCC
Confidence 233 22 4777888 55554 56643 34567778
Q ss_pred CHHHHHHHHHHhcc
Q 009987 162 TADGLLTWINKQTS 175 (521)
Q Consensus 162 ~~~~L~~~i~~~l~ 175 (521)
+.+.|.+.|++.+.
T Consensus 172 ~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 172 SVKDIEKKLIPLLE 185 (190)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 88999999988764
No 182
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.94 E-value=1.1e-09 Score=102.12 Aligned_cols=108 Identities=4% Similarity=-0.029 Sum_probs=72.6
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------cccHHH
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------KINTNL 120 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------d~~~~l 120 (521)
.+..++++.+. +.+.+++++||+|||+||++|+.+.|.++++++++++. .+.++.|+++. +....+
T Consensus 30 ~l~d~~G~~~~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d~~~~~e~~~~~~~ 101 (187)
T 3dwv_A 30 EVLDADHKPYN--LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ------GFTVLAFPSNQFGGQEPGNEEEI 101 (187)
T ss_dssp CCBBTTSCBCC--GGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG------TCEEEEEEBCCCSSCSSSBTTHH
T ss_pred EEEcCCCCEee--HHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC------CeEEEEEECcccCCCCCCCHHHH
Confidence 34555555443 34445689999999999999999999999999999753 37788887641 111111
Q ss_pred H---H-h--------------------------------CCCCcCc---eEEEe-cCCcccCCCCCCCccchhhhhcccc
Q 009987 121 C---D-K--------------------------------FSVGHYP---MLLWG-SPSKFVAGSWEPNQEKKEIRALEDW 160 (521)
Q Consensus 121 ~---~-~--------------------------------f~I~~yP---Tl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~ 160 (521)
. + + +++.++| +++++ ++|++ +..+.|.
T Consensus 102 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i-------------~~~~~g~ 168 (187)
T 3dwv_A 102 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP-------------VERFSPG 168 (187)
T ss_dssp HHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE-------------EEEECTT
T ss_pred HHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE-------------EEEECCC
Confidence 1 1 1 2344566 66665 55543 3456788
Q ss_pred CCHHHHHHHHHHhcc
Q 009987 161 QTADGLLTWINKQTS 175 (521)
Q Consensus 161 ~~~~~L~~~i~~~l~ 175 (521)
.+.++|.+.|++.+.
T Consensus 169 ~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 169 ASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999988775
No 183
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.89 E-value=1.4e-09 Score=100.73 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=44.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+..+++..+. +.+.+++++||.|||+||++|+.+.|.++++++++.+. .+.++.|+++
T Consensus 34 l~~~~G~~~~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~v~vv~vs~d 91 (181)
T 2p31_A 34 AVNIRGKLVS--LEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPH------HFNVLAFPCN 91 (181)
T ss_dssp EEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred eecCCCCEec--HHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcC------CEEEEEEECc
Confidence 3344444332 33345689999999999999999999999999999742 3888999874
No 184
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.89 E-value=2.8e-09 Score=96.58 Aligned_cols=47 Identities=13% Similarity=0.139 Sum_probs=40.0
Q ss_pred hcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 61 RDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 61 ~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
.+.+++++||.||++||++|+...|.++++++++.+ ..+.++.|+++
T Consensus 27 ~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~------~~~~vv~v~~d 73 (169)
T 2v1m_A 27 EKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG------KGLRILAFPCN 73 (169)
T ss_dssp GGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG------GTEEEEEEECC
T ss_pred HHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc------CCeEEEEEECC
Confidence 333568999999999999999999999999999974 23888999874
No 185
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=1.7e-10 Score=103.98 Aligned_cols=74 Identities=16% Similarity=0.283 Sum_probs=52.6
Q ss_pred cCCCCeEEEEEecCCChhHhhhhHHHHH-HHHHhCCCCCCCCCeEEEEEeeccccc--------------------cHHH
Q 009987 62 DTPATYAVVEFFANWCPACRNYKPQYEK-VARLFNGPNAAHPGIILMTRVDCALKI--------------------NTNL 120 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg~C~~~~P~~~~-lA~~~~~~~~~~~~~v~~~~VDc~~d~--------------------~~~l 120 (521)
+.+++++||.||++||++|+.+.|.+++ +++.+... ..+.++.|+++.+. +..+
T Consensus 30 ~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~-----~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~ 104 (159)
T 2ls5_A 30 SLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDN-----ADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADI 104 (159)
Confidence 3346889999999999999999999998 88877511 35888888874321 1122
Q ss_pred HHhCC--CCcCceEEEe-cCCcc
Q 009987 121 CDKFS--VGHYPMLLWG-SPSKF 140 (521)
Q Consensus 121 ~~~f~--I~~yPTl~~f-~~g~~ 140 (521)
.+.|+ +.++||++++ ++|++
T Consensus 105 ~~~~~~~~~~~P~~~lid~~G~i 127 (159)
T 2ls5_A 105 FAKYALRDAGITRNVLIDREGKI 127 (159)
Confidence 33444 5779998887 56644
No 186
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.87 E-value=5e-09 Score=94.92 Aligned_cols=86 Identities=9% Similarity=0.093 Sum_probs=64.2
Q ss_pred ceecCcccHHHHHhcCCCCe-EEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------
Q 009987 48 AVELNATNFDAVLRDTPATY-AVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~-vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (521)
+..++++.+. +.+..+++ ++|.|| ++||++|+...|.+.++++++.+. .+.++.|+++.
T Consensus 13 l~~~~G~~~~--l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~ 84 (161)
T 3drn_A 13 GIADNGEKIS--LSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY------DVVVIGVSSDDINSHKRFKEKY 84 (161)
T ss_dssp EEETTSCEEE--GGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT------CEEEEEEESCCHHHHHHHHHHT
T ss_pred eecCCCCEEE--HHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHh
Confidence 4444444432 33344566 999999 999999999999999999999743 37888888742
Q ss_pred --------cccHHHHHhCCCCc----CceEEEe-cCCccc
Q 009987 115 --------KINTNLCDKFSVGH----YPMLLWG-SPSKFV 141 (521)
Q Consensus 115 --------d~~~~l~~~f~I~~----yPTl~~f-~~g~~~ 141 (521)
|.+..+++.|+|.+ +|+++++ ++|++.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~ 124 (161)
T 3drn_A 85 KLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIR 124 (161)
T ss_dssp TCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEE
T ss_pred CCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEE
Confidence 24568899999999 9988877 566543
No 187
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.86 E-value=3.7e-09 Score=97.67 Aligned_cols=59 Identities=10% Similarity=0.133 Sum_probs=45.5
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
.+..++++.+. +.+.+++++||.|||+|||+|+...|.++++++++.+. .+.++.|+++
T Consensus 22 ~l~d~~G~~v~--l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~------~~~vi~is~d 80 (180)
T 3kij_A 22 EVKDAKGRTVS--LEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPS------HFSVLAFPCN 80 (180)
T ss_dssp EEEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTT------SEEEEEEECC
T ss_pred EEecCCCCEec--HHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccC------CeEEEEEECC
Confidence 34455554443 34445689999999999999999999999999999752 3888888764
No 188
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.85 E-value=2.2e-09 Score=97.60 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=70.9
Q ss_pred HhcCCCCeEEEEEecCCChh-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-c--------------------
Q 009987 60 LRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-N-------------------- 117 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~-C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-~-------------------- 117 (521)
+.+.+++++||.||++||++ |+.+.|.++++++++.+.+ ...+.++.|+++.+. .
T Consensus 30 l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~---~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d 106 (172)
T 2k6v_A 30 LSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKA---QERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSG 106 (172)
T ss_dssp GGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHH---HTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECC
T ss_pred HHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhc---cCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeC
Confidence 44445789999999999997 9999999999998885310 014888999875311 1
Q ss_pred -----HHHHHhCCC---------------CcCceEEEecCCcccCCCCCCCccchhhhhccccC--CHHHHHHHHHHh
Q 009987 118 -----TNLCDKFSV---------------GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ--TADGLLTWINKQ 173 (521)
Q Consensus 118 -----~~l~~~f~I---------------~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~--~~~~L~~~i~~~ 173 (521)
..+++.|++ .++||++++.+|++. ..+.|.. +.++|.+.|++.
T Consensus 107 ~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~-------------~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 107 SPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLV-------------LLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEE-------------EEECHHHHTCHHHHHHHHHHC
T ss_pred CHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEE-------------EEECCCCCCCHHHHHHHHHHh
Confidence 356777664 578998887765432 3456666 888999888764
No 189
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.85 E-value=9.8e-10 Score=93.78 Aligned_cols=87 Identities=16% Similarity=0.206 Sum_probs=57.6
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-----HHHHHhCCCCcC
Q 009987 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGHY 129 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~f~I~~y 129 (521)
.++..+.. ++++| ||++|||+|+.+.|.+++++.. +.++.||. +.+ ..++++|+|.++
T Consensus 12 ~~~~~~~~---~~vv~-f~a~~C~~C~~~~~~l~~~~~~-----------~~~v~v~~--~~~~~~~~~~l~~~~~v~~~ 74 (116)
T 2e7p_A 12 KAKELASS---APVVV-FSKTYCGYCNRVKQLLTQVGAS-----------YKVVELDE--LSDGSQLQSALAHWTGRGTV 74 (116)
T ss_dssp HHHHHHTS---SSEEE-EECTTCHHHHHHHHHHHHHTCC-----------CEEEEGGG--STTHHHHHHHHHHHHSCCSS
T ss_pred HHHHHHcC---CCEEE-EECCCChhHHHHHHHHHHcCCC-----------eEEEEccC--CCChHHHHHHHHHHhCCCCc
Confidence 44455543 34555 9999999999999999887432 34556664 333 569999999999
Q ss_pred ceEEEecCCcccCCCCCCCccchhhhhccccC---CHHHHHHHHHHh
Q 009987 130 PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQ---TADGLLTWINKQ 173 (521)
Q Consensus 130 PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~---~~~~L~~~i~~~ 173 (521)
||+ |.+|+... .+.|.. +.+.|.++|++.
T Consensus 75 Pt~--~~~g~~v~-------------~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 75 PNV--FIGGKQIG-------------GCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp CEE--EETTEEEE-------------CHHHHHHHHHTTCHHHHHHHT
T ss_pred CEE--EECCEEEC-------------ChHHHHHHHhCChHHHHHHHc
Confidence 999 33554432 122222 556777787653
No 190
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.83 E-value=5e-09 Score=99.64 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=39.7
Q ss_pred cCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 62 DTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+.+++++||+|||+|||+|+.++|.++++++++.+. .+.|+.|+++
T Consensus 44 ~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~------g~~vv~v~~d 89 (208)
T 2f8a_A 44 SLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR------GLVVLGFPCN 89 (208)
T ss_dssp GGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC------CeEEEEEECC
Confidence 335689999999999999999999999999999742 3889999874
No 191
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.82 E-value=4.5e-09 Score=97.31 Aligned_cols=58 Identities=12% Similarity=0.136 Sum_probs=44.4
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+..++++.+. +.+.+++++||.||++||++|+.+.|.++++++++.+. .+.|+.|+++
T Consensus 32 l~~~~G~~~~--l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~vs~d 89 (183)
T 2obi_A 32 AKDIDGHMVN--LDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAEC------GLRILAFPCN 89 (183)
T ss_dssp EEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred EEcCCCCEee--HHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcC------CeEEEEEECC
Confidence 4444444333 33345689999999999999999999999999999742 3888889874
No 192
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.80 E-value=4.9e-09 Score=94.36 Aligned_cols=73 Identities=8% Similarity=0.056 Sum_probs=57.2
Q ss_pred CCCC-eEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------------cc--cHH
Q 009987 63 TPAT-YAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KI--NTN 119 (521)
Q Consensus 63 ~~~~-~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~--~~~ 119 (521)
..++ +++|.|| ++||++|+.+.|.+.++++++.+ ..+.++.|+++. +. +..
T Consensus 33 ~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 106 (160)
T 1xvw_A 33 YRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN------DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGA 106 (160)
T ss_dssp GTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS------SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTH
T ss_pred hcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH------CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChH
Confidence 3455 8999998 99999999999999999999864 248888888742 21 677
Q ss_pred HHHhCCCC----cCc--eEEEe-cCCccc
Q 009987 120 LCDKFSVG----HYP--MLLWG-SPSKFV 141 (521)
Q Consensus 120 l~~~f~I~----~yP--Tl~~f-~~g~~~ 141 (521)
+.+.|+|. ++| +++++ ++|++.
T Consensus 107 ~~~~~~v~~~~~~~p~~~~~lid~~G~i~ 135 (160)
T 1xvw_A 107 VSQAYGVFNEQAGIANRGTFVVDRSGIIR 135 (160)
T ss_dssp HHHHTTCEETTTTEECSEEEEECTTSBEE
T ss_pred HHHHcCCccccCCCeeeeEEEECCCCeEE
Confidence 99999999 999 55554 677543
No 193
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.79 E-value=7.5e-09 Score=96.11 Aligned_cols=72 Identities=10% Similarity=0.069 Sum_probs=51.1
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc---------cccH
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------KINT 118 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------d~~~ 118 (521)
+..++++.+. +.+.+++++||.|||+||++|+...|.++++++++.+. .+.++.|+++. ++..
T Consensus 34 l~~~~G~~v~--l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~------~v~vv~is~d~~~~~~~~~~~~~~ 105 (185)
T 2gs3_A 34 AKDIDGHMVN--LDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAEC------GLRILAFPCNQFGKQEPGSNEEIK 105 (185)
T ss_dssp EEBTTSCEEE--GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG------TEEEEEEECCTTTTCCCSCHHHHH
T ss_pred eEcCCCCEee--HHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcC------CeEEEEEECcccCCCCCCCHHHHH
Confidence 3344444332 33345689999999999999999999999999999742 38888998742 1224
Q ss_pred HHHHhCCCC
Q 009987 119 NLCDKFSVG 127 (521)
Q Consensus 119 ~l~~~f~I~ 127 (521)
+.++++++.
T Consensus 106 ~~~~~~~~~ 114 (185)
T 2gs3_A 106 EFAAGYNVK 114 (185)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 566666664
No 194
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.79 E-value=6.6e-09 Score=96.49 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=72.2
Q ss_pred cCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------------------ccc
Q 009987 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KIN 117 (521)
Q Consensus 62 ~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~ 117 (521)
+.+++++||.|| ++||++|+.+.|.++++++++.+. .+.++.|+++. +.+
T Consensus 28 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 101 (187)
T 1we0_A 28 DLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKL------GVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPS 101 (187)
T ss_dssp TTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTT
T ss_pred HHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCc
Confidence 334689999999 999999999999999999998642 37888888742 124
Q ss_pred HHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhcccc----CCHHHHHHHHHHhcc
Q 009987 118 TNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (521)
Q Consensus 118 ~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~----~~~~~L~~~i~~~l~ 175 (521)
..+++.|+|. ++|+++++ ++|++. ..+.|. ++.++|.+.|++...
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQ-------------AIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 5788999999 99999988 566543 223332 377888888877653
No 195
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.78 E-value=9.2e-09 Score=96.33 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=72.7
Q ss_pred cCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------------------ccc
Q 009987 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KIN 117 (521)
Q Consensus 62 ~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~ 117 (521)
+.+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+.+. +.+
T Consensus 42 ~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~ 115 (195)
T 2bmx_A 42 EHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDR------DAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIK 115 (195)
T ss_dssp SSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTT
T ss_pred HhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCc
Confidence 335689999999 999999999999999999999742 47888888742 124
Q ss_pred HHHHHhCCCC-----cCceEEEe-cCCcccCCCCCCCccchhhhhcccc----CCHHHHHHHHHHhcc
Q 009987 118 TNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQTS 175 (521)
Q Consensus 118 ~~l~~~f~I~-----~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~----~~~~~L~~~i~~~l~ 175 (521)
..+++.|+|. ++|+++++ ++|++. ..+.|. .+.++|++.|++...
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQ-------------FVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEE-------------EEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 5788999999 99998887 466543 223333 378999999987654
No 196
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.78 E-value=5.1e-09 Score=83.60 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=47.9
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCc
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSK 139 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~ 139 (521)
++.||++|||+|+.+.|.++++++++. ..+.++.||.+ .++.++.++|||+++||+++ +|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~-------~~~~~~~v~~~-~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSK-------YTVEIVHLGTD-KARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTT-------EEEEEEETTTC-SSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcC-------CeEEEEEecCC-hhhHHHHHHcCCCcCCEEEE--CCE
Confidence 788999999999999999998876543 23556666641 15778899999999999987 553
No 197
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.74 E-value=8.7e-09 Score=96.66 Aligned_cols=92 Identities=13% Similarity=0.138 Sum_probs=70.7
Q ss_pred CCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------------cc
Q 009987 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (521)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.++.|+.+. |.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEK------GFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADI 105 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECT
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECC
Confidence 5689999999 999999999999999999998642 37888887642 12
Q ss_pred cHHHHHhCCCC-----cCceEEEe-cCCcccCCCCCCCccchhhhhcccc----CCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDW----QTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I~-----~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~----~~~~~L~~~i~~~l 174 (521)
+..+++.|+|. ++|+++++ ++|++. ..+.|. .+.++|.+.|++..
T Consensus 106 ~~~~~~~~~v~~~~g~~~P~~~lid~~G~i~-------------~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 106 TKSISRDYDVLFEEAIALRGAFLIDKNMKVR-------------HAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEEETTTEEE-------------EEEEESSSCCCHHHHHHHHHHHHH
T ss_pred chHHHHHhCCcccCCcccceEEEECCCCEEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 45789999999 99988887 566543 223333 36788888887654
No 198
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.73 E-value=1.9e-08 Score=96.07 Aligned_cols=86 Identities=14% Similarity=0.222 Sum_probs=61.8
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEee--------------------------------
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (521)
.+++++++||++|||+|+++.|.++++++. + -.+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~------v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~ 156 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G------ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGK 156 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T------EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C------cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCC
Confidence 457899999999999999999999998752 1 112222211
Q ss_pred ------c--cccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 112 ------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 112 ------c--~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
| ..+++.++++++||+++||+ ++.+| ..+.|..+.+.|.++|++..
T Consensus 157 ~~~~~~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG----------------~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 157 SVAPASCDVDIADHYALGVQLGVSGTPAV-VLSNG----------------TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCCCCCCSCCHHHHHHHHHHHTCCSSSEE-ECTTS----------------CEEESCCCHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHcCCCccCEE-EEcCC----------------eEecCCCCHHHHHHHHHHhh
Confidence 2 11346778999999999999 44444 13567888999999887653
No 199
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.72 E-value=9.7e-09 Score=86.01 Aligned_cols=81 Identities=16% Similarity=0.281 Sum_probs=61.9
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCC
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSW 145 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~ 145 (521)
.+.++.|+++|||+|+.+.|.++++++ .+.+..+|.+.+++.++.++|| +++|++++ +|+.
T Consensus 16 ~~~v~~f~~~~C~~C~~~~~~L~~l~~-----------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~~--~g~~----- 76 (100)
T 1wjk_A 16 LPVLTLFTKAPCPLCDEAKEVLQPYKD-----------RFILQEVDITLPENSTWYERYK-FDIPVFHL--NGQF----- 76 (100)
T ss_dssp CCEEEEEECSSCHHHHHHHHHTSTTSS-----------SSEEEEEETTSSTTHHHHHHSS-SSCSEEEE--SSSE-----
T ss_pred CCEEEEEeCCCCcchHHHHHHHHHhhh-----------CCeEEEEECCCcchHHHHHHHC-CCCCEEEE--CCEE-----
Confidence 567999999999999999999886542 2678889985336789999999 99998743 4321
Q ss_pred CCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+ ..++.+.+.|.++|.+.+.
T Consensus 77 --------~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 77 --------L--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp --------E--EESSCCHHHHHHHHHSSSC
T ss_pred --------E--EecCCCHHHHHHHHHHHHh
Confidence 1 2355788899999977653
No 200
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.71 E-value=3.3e-08 Score=106.85 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=75.1
Q ss_pred eecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCc
Q 009987 49 VELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGH 128 (521)
Q Consensus 49 ~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~ 128 (521)
..++++.++.+. +..++..++.||++|||+|+.+.|.+++++..+. .+.+..+|. +++++++++|+|++
T Consensus 102 ~~~~~~~~~~i~-~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--------~v~~~~vd~--~~~~~~~~~~~i~s 170 (521)
T 1hyu_A 102 SKEAQSLLEQIR-DIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--------RIKHTAIDG--GTFQNEITERNVMG 170 (521)
T ss_dssp CCSCHHHHHHHH-HCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--------TEEEEEEET--TTCHHHHHHTTCCS
T ss_pred CCCCHHHHHHHH-hcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--------ceEEEEEec--hhhHHHHHHhCCCc
Confidence 345566665553 3334667999999999999999999999998863 489999997 57899999999999
Q ss_pred CceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 129 YPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 129 yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
+||+++ +|+.. ..|..+.++|.+++.+
T Consensus 171 vPt~~i--~g~~~---------------~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 171 VPAVFV--NGKEF---------------GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp SSEEEE--TTEEE---------------EESCCCHHHHHHHHCC
T ss_pred cCEEEE--CCEEE---------------ecCCCCHHHHHHHHhh
Confidence 999977 55322 2377888899988854
No 201
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.70 E-value=3.1e-08 Score=92.86 Aligned_cols=93 Identities=13% Similarity=0.120 Sum_probs=70.2
Q ss_pred CCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--------------------------
Q 009987 63 TPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-------------------------- 115 (521)
Q Consensus 63 ~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-------------------------- 115 (521)
.+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++..
T Consensus 32 ~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D 105 (197)
T 1qmv_A 32 YKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKL------GCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLAD 105 (197)
T ss_dssp GTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEEC
T ss_pred HCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEEC
Confidence 34688999999 999999999999999999999742 388888887521
Q ss_pred ccHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccc----cCCHHHHHHHHHHhc
Q 009987 116 INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (521)
Q Consensus 116 ~~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G----~~~~~~L~~~i~~~l 174 (521)
.+.++++.|+|. ++|+++++ ++|++.. .+.| .++.+++++.|++..
T Consensus 106 ~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~i~~-------------~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 106 VTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQ-------------ITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp TTCHHHHHTTCEETTTTEECEEEEEECTTSBEEE-------------EEEECTTBCCCHHHHHHHHHHHH
T ss_pred CcHHHHHHcCCccCCCCceeeEEEEECCCCcEEE-------------EEeCCCCCCCCHHHHHHHHHhcc
Confidence 135789999998 89987776 5665432 1222 457788888887653
No 202
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.69 E-value=5.5e-08 Score=89.10 Aligned_cols=86 Identities=15% Similarity=0.263 Sum_probs=65.0
Q ss_pred CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc-----------------------------
Q 009987 63 TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA----------------------------- 113 (521)
Q Consensus 63 ~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~----------------------------- 113 (521)
..++++|++|+++|||+|+.+.|.++++.+++. .+.+...+..
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~--------~v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~l 91 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP--------NVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWAL 91 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--------TEEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHH
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCC--------CEEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHH
Confidence 345788999999999999999999999988753 2444433321
Q ss_pred --------------------------------------ccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhh
Q 009987 114 --------------------------------------LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIR 155 (521)
Q Consensus 114 --------------------------------------~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~ 155 (521)
.+.+..+++++||+++||+++ +| .
T Consensus 92 f~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g----------------~ 153 (175)
T 3gyk_A 92 MGMSGKANETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED----------------A 153 (175)
T ss_dssp HTCSSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT----------------E
T ss_pred HhcCCCCCHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC----------------E
Confidence 123456788999999999987 33 2
Q ss_pred hccccCCHHHHHHHHHHhc
Q 009987 156 ALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 156 ~~~G~~~~~~L~~~i~~~l 174 (521)
.+.|..+.+.|.+.|++.+
T Consensus 154 ~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 154 LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp EECSCCCHHHHHHHHHHHH
T ss_pred EeeCCCCHHHHHHHHHHHH
Confidence 3568889999999998765
No 203
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.67 E-value=2.7e-08 Score=93.65 Aligned_cols=111 Identities=15% Similarity=0.236 Sum_probs=69.7
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChh-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~-C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (521)
.+..+++..+. +.+.+++++||.||++||++ |+...|.+.++.+.+.+.. .+.+.++.|+++.
T Consensus 25 ~l~d~~G~~v~--l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~---~~~v~vv~Is~D~~~d~~~~~~~~ 99 (200)
T 2b7k_A 25 HLEDMYGNEFT--EKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKY---GITLQPLFITCDPARDSPAVLKEY 99 (200)
T ss_dssp EEEETTSCEEE--GGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEEESCTTTCCHHHHHHH
T ss_pred EEEcCCCCEEe--HHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhh---CCceEEEEEECCCCCCCHHHHHHH
Confidence 34445544433 23334689999999999997 9999999999888775210 0246777777641
Q ss_pred ---------------cccHHHHHhCCCC-cCc---------------eEEE-ecCCcccCCCCCCCccchhhhhccccCC
Q 009987 115 ---------------KINTNLCDKFSVG-HYP---------------MLLW-GSPSKFVAGSWEPNQEKKEIRALEDWQT 162 (521)
Q Consensus 115 ---------------d~~~~l~~~f~I~-~yP---------------Tl~~-f~~g~~~~~~~~~~~~~~~v~~~~G~~~ 162 (521)
+....+++.|||. +.| ++++ .++|++. ..+.|..+
T Consensus 100 ~~~~~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~-------------~~~~g~~~ 166 (200)
T 2b7k_A 100 LSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFV-------------DALGRNYD 166 (200)
T ss_dssp HTTSCTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEE-------------EEECTTCC
T ss_pred HHHcCCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEE-------------EEeCCCCC
Confidence 1234688899987 454 4444 4566443 34556667
Q ss_pred HHHHHHHHHHhcc
Q 009987 163 ADGLLTWINKQTS 175 (521)
Q Consensus 163 ~~~L~~~i~~~l~ 175 (521)
.+.+.+.|.+.+.
T Consensus 167 ~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 167 EKTGVDKIVEHVK 179 (200)
T ss_dssp TTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776654
No 204
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.66 E-value=5.8e-08 Score=77.75 Aligned_cols=77 Identities=19% Similarity=0.269 Sum_probs=58.4
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhCC--CCcCceEEEecCCcccCCC
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLWGSPSKFVAGS 144 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f~--I~~yPTl~~f~~g~~~~~~ 144 (521)
++.|+++|||+|+.+.|.+++++.++. .+.+..+|++.+. ..++.++++ +.++||+++ +|+..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~--------~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g~~i--- 69 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD--------DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQQHI--- 69 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS--------SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TTEEE---
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC--------CceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CCEEE---
Confidence 688999999999999999999998864 3788889985322 247999999 999999843 44321
Q ss_pred CCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 145 WEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 145 ~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.| .++|.+++++.+
T Consensus 70 -------------~~---~~~l~~~~~~~~ 83 (85)
T 1ego_A 70 -------------GG---YTDFAAWVKENL 83 (85)
T ss_dssp -------------ES---SHHHHHHHHHHH
T ss_pred -------------EC---HHHHHHHHHHhc
Confidence 12 367888887654
No 205
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.65 E-value=4.2e-08 Score=92.36 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=70.3
Q ss_pred CCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------------cc
Q 009987 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (521)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++. |.
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~------~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~ 108 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDI------GCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADK 108 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECT
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECC
Confidence 4589999999 999999999999999999999642 38888888742 11
Q ss_pred cHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+..+++.|+|. ++|+++++ ++|++... .+......++.++|++.|++..
T Consensus 109 ~~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~---------~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 109 TKCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQI---------TVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp TCHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCccCCCCceeeEEEEECCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHhh
Confidence 45788999999 99988877 56654321 0001122357788888887654
No 206
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.63 E-value=4.3e-08 Score=93.89 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=71.9
Q ss_pred cCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------------
Q 009987 62 DTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------- 114 (521)
Q Consensus 62 ~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------------- 114 (521)
+..++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++.
T Consensus 53 d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~ 126 (220)
T 1zye_A 53 DFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDV------NCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLS 126 (220)
T ss_dssp GGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEE
T ss_pred HhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEE
Confidence 334589999999 999999999999999999999642 37888887742
Q ss_pred cccHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 115 KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 115 d~~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|.+..+++.|+|. ++|+++++ ++|++... .+......++.+++++.|++..
T Consensus 127 D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 127 DLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHL---------SVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp CTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHhCCeecCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 1245789999999 99999988 56654321 0111122367788888887654
No 207
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.63 E-value=4.7e-08 Score=88.91 Aligned_cols=48 Identities=8% Similarity=0.185 Sum_probs=39.1
Q ss_pred cCCCCeEEEEEecCCCh-hHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 62 DTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 62 ~~~~~~vlV~FyA~WCg-~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+.+++++||.||++||+ +|+...|.+.++.+.+.+.+ ..+.|+.|+++
T Consensus 30 ~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~----~~~~vv~is~d 78 (174)
T 1xzo_A 30 SLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAEN----IDVRIISFSVD 78 (174)
T ss_dssp GGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred hcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcC----CcEEEEEEEeC
Confidence 33468899999999999 99999999999999986432 14788888874
No 208
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.59 E-value=5.4e-08 Score=90.74 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=69.3
Q ss_pred CCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------------cc
Q 009987 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (521)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.++.|+++. |.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~ 103 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKER------NVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDI 103 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECC
Confidence 4588999999 999999999999999999998642 37788887642 11
Q ss_pred cHHHHHhCCCC-----cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I~-----~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+.++.+.|+|. .+|+++++ ++|++... .+......++.+++++.|++..
T Consensus 104 ~~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~---------~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 104 SKSIARSYDVLFNESVALRAFVLIDKQGVVQHL---------LVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp TSHHHHHTTCEETTTEECCEEEEECTTSBEEEE---------EEGGGSSGGGHHHHHHHHHHHH
T ss_pred cHHHHHHhCCcCcCCceeeEEEEEcCCCEEEEE---------EeCCCCCCCCHHHHHHHHHHHh
Confidence 35789999999 89999888 56654321 0000112356788888877644
No 209
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.57 E-value=7.3e-08 Score=86.95 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=61.0
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEec-CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA-~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (521)
+...+++.+. +.+.++++++|.||+ +||++|+...|.+.++.+++++. .+.++.|.++.
T Consensus 20 l~~~~G~~~~--l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~------~~~vv~vs~d~~~~~~~~~~~~~ 91 (163)
T 3gkn_A 20 LSLSGGTQTT--LRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA------GAKILGVSRDSVKSHDNFCAKQG 91 (163)
T ss_dssp EECSTTCEEC--SGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT------TCEEEEEESSCHHHHHHHHHHHC
T ss_pred ccCCCCCEEE--HHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhC
Confidence 3344444332 233345789999998 99999999999999999998743 26677776642
Q ss_pred -------cccHHHHHhCCCCc------------CceEEEe-cCCccc
Q 009987 115 -------KINTNLCDKFSVGH------------YPMLLWG-SPSKFV 141 (521)
Q Consensus 115 -------d~~~~l~~~f~I~~------------yPTl~~f-~~g~~~ 141 (521)
|.+..+.+.|++.. +|+++++ ++|++.
T Consensus 92 ~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~i~ 138 (163)
T 3gkn_A 92 FAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVV 138 (163)
T ss_dssp CSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSCEE
T ss_pred CCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCeEE
Confidence 23456788899987 8988887 466543
No 210
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.55 E-value=1.4e-07 Score=90.28 Aligned_cols=75 Identities=12% Similarity=0.187 Sum_probs=58.8
Q ss_pred hcCCCCeEEEEEec-CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc------------------------
Q 009987 61 RDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (521)
Q Consensus 61 ~~~~~~~vlV~FyA-~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (521)
.+.+++++||.||+ +||++|+...|.++++++++++. .+.|+.|+++..
T Consensus 65 ~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l 138 (222)
T 3ztl_A 65 KDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSR------NCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLL 138 (222)
T ss_dssp GGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEE
T ss_pred HHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhhccccccceeEE
Confidence 34456899999997 99999999999999999999742 378888877531
Q ss_pred --ccHHHHHhCCCC------cCceEEEe-cCCccc
Q 009987 116 --INTNLCDKFSVG------HYPMLLWG-SPSKFV 141 (521)
Q Consensus 116 --~~~~l~~~f~I~------~yPTl~~f-~~g~~~ 141 (521)
.+..+.+.|+|. .+|+++++ ++|++.
T Consensus 139 ~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~I~ 173 (222)
T 3ztl_A 139 ADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGILR 173 (222)
T ss_dssp ECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSEEE
T ss_pred eCCchHHHHHcCCeecCCCCccceEEEECCCCeEE
Confidence 234678899998 89988887 566543
No 211
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.54 E-value=1.5e-07 Score=89.67 Aligned_cols=84 Identities=18% Similarity=0.229 Sum_probs=60.8
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEee--------------------------------
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD-------------------------------- 111 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD-------------------------------- 111 (521)
.+++++++|+++|||+|+++.|.++++.+. + -.+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~------v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~ 156 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G------ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGN 156 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T------EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C------cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCC
Confidence 457899999999999999999999997652 1 112222221
Q ss_pred ------c--cccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 112 ------C--ALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 112 ------c--~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
| ..+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|++
T Consensus 157 ~~~~~~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~----------------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 157 LPKEVKTPNIVKKHYELGIQFGVRGTPSIVT-STGE----------------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSCCCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC----------------CCCSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE----------------EecCCCCHHHHHHHHHh
Confidence 1 1124577899999999999987 5552 34677889999998875
No 212
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.52 E-value=1.5e-07 Score=89.75 Aligned_cols=96 Identities=11% Similarity=0.150 Sum_probs=68.8
Q ss_pred CCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------------cc
Q 009987 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------------KI 116 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------------d~ 116 (521)
+++++||.|| ++||++|+.+.|.+.++++++.+. .+.|+.|+++. |.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 124 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHER------NVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDI 124 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECC
Confidence 4688999999 999999999999999999999642 37777777642 12
Q ss_pred cHHHHHhCCCC-----cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSVG-----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I~-----~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+.++++.|+|. .+|+++++ ++|++... .+......++.++|++.|++..
T Consensus 125 ~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~---------~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 125 TKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHL---------LVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHhCCccccCCcccEEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHHH
Confidence 45789999999 89977776 56654321 0000112356888888887644
No 213
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.51 E-value=3.3e-07 Score=87.58 Aligned_cols=57 Identities=12% Similarity=0.210 Sum_probs=44.4
Q ss_pred ceecC-cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 48 AVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 48 v~~L~-~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+..++ ++.+. +.+.+++++||+|||+|||+|+ .+|.++++.+++.+ ..+.|+.|.|+
T Consensus 40 l~d~~~G~~v~--Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~------~g~~Vlgvs~d 97 (215)
T 2i3y_A 40 AIALNKNEYVS--FKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKP------YGLVVLGFPCN 97 (215)
T ss_dssp EEBSSSSCEEE--GGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG------GTEEEEEEECC
T ss_pred eeeCCCCCEEc--HHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc------CCeEEEEEEcc
Confidence 44454 44433 4555678999999999999999 89999999999974 24889999874
No 214
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.49 E-value=1.9e-07 Score=84.57 Aligned_cols=89 Identities=9% Similarity=0.085 Sum_probs=63.4
Q ss_pred CCCeEEEEEecCC-ChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------c-ccHHHH
Q 009987 64 PATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------K-INTNLC 121 (521)
Q Consensus 64 ~~~~vlV~FyA~W-Cg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------d-~~~~l~ 121 (521)
++++++|.||++| |++|+...|.++++++++. .+.++.|+.+. + .+.++.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~--------~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 114 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLG--------DVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFG 114 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHS--------SCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHH
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcC--------CCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHH
Confidence 3578999999999 9999999999999999982 26666666542 1 345788
Q ss_pred HhCCCCc------CceEEEe-cCCcccCCCCCCCccchhhhhcc-----ccCCHHHHHHHHHHh
Q 009987 122 DKFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALE-----DWQTADGLLTWINKQ 173 (521)
Q Consensus 122 ~~f~I~~------yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~-----G~~~~~~L~~~i~~~ 173 (521)
+.|+|.. +|+++++ ++|++.. .+. ...+.+++++.|++.
T Consensus 115 ~~~~v~~~~~g~~~p~~~lid~~G~i~~-------------~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 115 EAFGVYIKELRLLARSVFVLDENGKVVY-------------AEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp HHTTCBBTTTCSBCCEEEEECTTSCEEE-------------EEECSBTTSCCCSHHHHHHHHHH
T ss_pred HHhCCccccCCceeeEEEEEcCCCcEEE-------------EEecCCcCCCCCHHHHHHHHHHh
Confidence 8999987 4877766 5665432 222 223557787777654
No 215
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.47 E-value=3.4e-08 Score=89.40 Aligned_cols=109 Identities=11% Similarity=0.110 Sum_probs=60.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (521)
+...+++.+. +.+.++++++|.|| ++||++|+..+|.+.++.+++++. .+.++.|+.+.
T Consensus 15 l~~~~G~~~~--l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~------~~~~v~vs~d~~~~~~~~~~~~~ 86 (157)
T 4g2e_A 15 LPDTELKKVK--LSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQV------NAVVLGISVDPPFSNKAFKEHNK 86 (157)
T ss_dssp EEBTTSCEEE--GGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGC------SSEEEEEESSCHHHHHHHHHHTT
T ss_pred eECCCCCEEe--HHHHCCCeEEEEecCCCCCCccccchhhccccccccccc------CceEeeecccchhHHHHHHHHcC
Confidence 3344444332 34445688999999 999999999999999999888653 35666666532
Q ss_pred -------cccHHHHHhCCCC-----------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 115 -------KINTNLCDKFSVG-----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 115 -------d~~~~l~~~f~I~-----------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
|.+.++++.|||. ..|+++++ ++|++... .......+..+.+++++.|+.
T Consensus 87 ~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 87 LNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYK--------WVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp CCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEE--------EEESSTTCCCCHHHHHHHHHH
T ss_pred CcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEE--------EECCCCCCCCCHHHHHHHHHH
Confidence 2334566777763 34555554 45544310 000112344567788877754
No 216
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.46 E-value=2.3e-07 Score=85.62 Aligned_cols=87 Identities=15% Similarity=0.148 Sum_probs=61.1
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (521)
.+..++++.+. +.+.++++++|.|| ++||++|+...|.++++.+++++. .+.++.|.++.
T Consensus 35 ~l~~~~G~~v~--l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~------~~~vv~Vs~D~~~~~~~~~~~~ 106 (179)
T 3ixr_A 35 PLMLSGSTCKT--LSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQI------NATVLGVSRDSVKSHDSFCAKQ 106 (179)
T ss_dssp CEEEGGGEEEC--GGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTT------TEEEEEEESCCHHHHHHHHHHH
T ss_pred eEECCCCCEEe--HHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEcCCCHHHHHHHHHHc
Confidence 34445554443 44445688899998 999999999999999999999753 37777777642
Q ss_pred --------cccHHHHHhCCCCc------------CceEEEe-cCCccc
Q 009987 115 --------KINTNLCDKFSVGH------------YPMLLWG-SPSKFV 141 (521)
Q Consensus 115 --------d~~~~l~~~f~I~~------------yPTl~~f-~~g~~~ 141 (521)
|.+..+++.|+|.. .|+++++ ++|++.
T Consensus 107 ~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~ 154 (179)
T 3ixr_A 107 GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIV 154 (179)
T ss_dssp TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEE
T ss_pred CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEE
Confidence 23446788888854 5767666 466543
No 217
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.43 E-value=1.4e-06 Score=83.47 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=86.4
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
.+.|.++|.+++....... ...+++.|+.+||++|..+.+.|+++|+.++ +.+.|+.+|++.+.+..+++.|
T Consensus 112 ~plv~e~t~~n~~~~~~~~-~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k-------~~i~F~~vd~~~~~~~~~l~~f 183 (227)
T 4f9z_D 112 LHMVTEYNPVTVIGLFNSV-IQIHLLLIMNKASPEYEENMHRYQKAAKLFQ-------GKILFILVDSGMKENGKVISFF 183 (227)
T ss_dssp CCSEEECCHHHHHHHHHSS-CCEEEEEEECTTSTTHHHHHHHHHHHHHHTT-------TTCEEEEEETTSGGGHHHHHHT
T ss_pred CCceeecCcccHHHHhccC-CceEEEEEEcCCcchHHHHHHHHHHHHHHhh-------CCEEEEEeCCccHhHHHHHHHc
Confidence 3458899999998887653 2445667889999999999999999999997 4589999998655678899999
Q ss_pred CCC--cCceEEEecCCcccCCCCCCCccchhhhhc-cccCCHHHHHHHHHHhcc
Q 009987 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQTADGLLTWINKQTS 175 (521)
Q Consensus 125 ~I~--~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~-~G~~~~~~L~~~i~~~l~ 175 (521)
|+. .+|++.++..... ....+ .+..+.+.|.+|+++.+.
T Consensus 184 gl~~~~~P~~~i~~~~~~------------~ky~~~~~~~t~~~i~~Fv~~~~~ 225 (227)
T 4f9z_D 184 KLKESQLPALAIYQTLDD------------EWDTLPTAEVSVEHVQNFCDGFLS 225 (227)
T ss_dssp TCCGGGCSEEEEEESSSC------------CEEEETTCCCCHHHHHHHHHHHHT
T ss_pred CCCcccCCEEEEEECCCC------------ccccCCcCCCCHHHHHHHHHHHhC
Confidence 998 8999999864210 00111 356899999999988764
No 218
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.43 E-value=2.6e-07 Score=83.12 Aligned_cols=68 Identities=6% Similarity=0.086 Sum_probs=51.5
Q ss_pred CeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------------cccHHHHHhCC
Q 009987 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------KINTNLCDKFS 125 (521)
Q Consensus 66 ~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------d~~~~l~~~f~ 125 (521)
+++||.|| ++||++|+...|.+.++.+++.+. + .++.|+++. |.+..+.+.|+
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~-----~--~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 108 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEY-----A--AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLG 108 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTT-----C--EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHT
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhC-----C--cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhC
Confidence 47889987 999999999999999999999742 2 555555432 23456888999
Q ss_pred CCcCc-------eEEEecCCccc
Q 009987 126 VGHYP-------MLLWGSPSKFV 141 (521)
Q Consensus 126 I~~yP-------Tl~~f~~g~~~ 141 (521)
|...| |+++ ++|++.
T Consensus 109 v~~~p~~g~~~~~~li-~~G~i~ 130 (159)
T 2a4v_A 109 AKKTPLSGSIRSHFIF-VDGKLK 130 (159)
T ss_dssp CBSSSSSCBCCEEEEE-ETTEEE
T ss_pred CcccccCCccceEEEE-cCCEEE
Confidence 99988 5666 877554
No 219
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.39 E-value=6.5e-07 Score=81.86 Aligned_cols=110 Identities=11% Similarity=0.074 Sum_probs=69.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCCCh-hHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg-~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (521)
+...+++.+. +.+.+++++||.||++||+ .|....|.++++.+++...+ ..+.++.|.++.
T Consensus 13 l~d~~G~~v~--l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~----~~~~vv~is~d~~d~~~~~~~~~~ 86 (170)
T 3me7_A 13 LVDSYGNEFQ--LKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPG----KDFWVITFTFDPKDTLEDIKRFQK 86 (170)
T ss_dssp EEETTCCEEE--GGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBT----TTBEEEEEECCTTCCHHHHHHHHH
T ss_pred EEcCCcCEEc--hHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcC----CceEEEEEECCCCCCHHHHHHHHH
Confidence 4444444333 2333468899999999997 69999999999999996422 236666665531
Q ss_pred -----------------cccHHHHHhCCCC---------cCceEEEe-cCCcccCCCCCCCccchhhhhccc-cCCHHHH
Q 009987 115 -----------------KINTNLCDKFSVG---------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED-WQTADGL 166 (521)
Q Consensus 115 -----------------d~~~~l~~~f~I~---------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G-~~~~~~L 166 (521)
+....+++.||+. ..|+++++ ++|++. ..+.| ..+.++|
T Consensus 87 ~~~~~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~-------------~~~~g~~~~~~~i 153 (170)
T 3me7_A 87 EYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIK-------------DYIYGVNYNYLEF 153 (170)
T ss_dssp HTTCCSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEE-------------EEEESSSCCHHHH
T ss_pred HcCCCCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEE-------------EEEeCCCCCHHHH
Confidence 1223566665543 34655554 444332 23444 3678999
Q ss_pred HHHHHHhccc
Q 009987 167 LTWINKQTSR 176 (521)
Q Consensus 167 ~~~i~~~l~~ 176 (521)
.+.|.+....
T Consensus 154 ~~~l~~~~~~ 163 (170)
T 3me7_A 154 VNALRLARGE 163 (170)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhhcc
Confidence 9999887654
No 220
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.38 E-value=8.9e-07 Score=84.02 Aligned_cols=47 Identities=6% Similarity=0.103 Sum_probs=39.2
Q ss_pred HhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 60 LRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 60 l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+.+.+++++||+|||+|||+| ..+|.++++.+++++. .+.|+.|+|+
T Consensus 33 Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~------g~~vlgvs~d 79 (207)
T 2r37_A 33 FKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPF------GLVILGFPCN 79 (207)
T ss_dssp GGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG------TEEEEEEECC
T ss_pred HHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC------CEEEEEEECc
Confidence 344467899999999999999 6899999999999742 3888888874
No 221
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.35 E-value=8.6e-07 Score=84.23 Aligned_cols=99 Identities=11% Similarity=0.114 Sum_probs=66.0
Q ss_pred hcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc------------------------
Q 009987 61 RDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK------------------------ 115 (521)
Q Consensus 61 ~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d------------------------ 115 (521)
.+.+++++||.|| ++||++|+...|.+.++++++++. .+.++.|+++..
T Consensus 44 ~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l 117 (211)
T 2pn8_A 44 TDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLL 117 (211)
T ss_dssp GGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEE
T ss_pred HHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEE
Confidence 3345689999999 999999999999999999999642 377777766421
Q ss_pred --ccHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 116 --INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 116 --~~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+..+++.|+|. .+|+++++ ++|++... .+......++.+++++.|+...
T Consensus 118 ~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~---------~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 118 SDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp ECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred ECCchHHHHHcCCcccCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHhh
Confidence 123567778874 57877776 45544311 0000112357788888877643
No 222
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.34 E-value=6.8e-07 Score=82.03 Aligned_cols=71 Identities=10% Similarity=0.156 Sum_probs=53.0
Q ss_pred cCCCCeEEEEEecCC-ChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc--------------------cccHHH
Q 009987 62 DTPATYAVVEFFANW-CPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL--------------------KINTNL 120 (521)
Q Consensus 62 ~~~~~~vlV~FyA~W-Cg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~--------------------d~~~~l 120 (521)
+.+++++||.||++| |++|+...|.+++++++ . .+.|+.|+.+. |.+..+
T Consensus 41 ~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~--------~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~ 111 (175)
T 1xvq_A 41 QFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA-S--------GATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSF 111 (175)
T ss_dssp GGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-T--------TCEEEEEESSCHHHHTTCC------CEEEEECTTSSH
T ss_pred HcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-c--------CCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHH
Confidence 334688999999999 99999999999999987 3 16677776541 113568
Q ss_pred HHhCCCCcC---------ceEEEe-cCCccc
Q 009987 121 CDKFSVGHY---------PMLLWG-SPSKFV 141 (521)
Q Consensus 121 ~~~f~I~~y---------PTl~~f-~~g~~~ 141 (521)
.+.|+|... |+++++ ++|++.
T Consensus 112 ~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 112 GEDYGVTIADGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp HHHTTCBBCSSTTTTSBCSEEEEECTTSBEE
T ss_pred HHHhCCcccccccCCcccceEEEECCCCeEE
Confidence 899999887 766665 566543
No 223
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.30 E-value=8.8e-07 Score=84.89 Aligned_cols=96 Identities=14% Similarity=0.171 Sum_probs=64.1
Q ss_pred CCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--------------------------c
Q 009987 64 PATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------I 116 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~ 116 (521)
+++++||.|| ++||++|+...|.+.++++++.+. .+.|+.|+++.. .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~------~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~ 128 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENK------NVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDI 128 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECT
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECC
Confidence 5689999999 999999999999999999998642 377777765421 1
Q ss_pred cHHHHHhCCC-----CcCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSV-----GHYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I-----~~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+..+++.|+| ..+|+++++ ++|++... .+.......+.+++++.|++..
T Consensus 129 ~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~---------~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 129 NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQ---------TVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp TSHHHHHTTCEETTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHHHH
T ss_pred chHHHHHcCCcccCCCccceEEEECCCCeEEEE---------EecCCCCCCCHHHHHHHHHHHh
Confidence 2346677777 367877776 45544311 0000011357788888887643
No 224
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.28 E-value=1.2e-06 Score=84.96 Aligned_cols=87 Identities=17% Similarity=0.270 Sum_probs=61.8
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeec--------------------------------
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC-------------------------------- 112 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc-------------------------------- 112 (521)
.+.+|++|+.+|||+|+++.|.++++.+. +.|.|..++.
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~---------g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~ 167 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS---------GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGG 167 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT---------TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTT
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC---------CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhc
Confidence 46789999999999999999999887664 1254443222
Q ss_pred ----------------cccccHHHHHhCCCCcCceEEEec-CCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 113 ----------------ALKINTNLCDKFSVGHYPMLLWGS-PSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 113 ----------------~~d~~~~l~~~f~I~~yPTl~~f~-~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
..+.+..+++++||+++||+++.. +|+ +..+.|..+.+.|.++|++..
T Consensus 168 ~~~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~--------------~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 168 KLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT--------------LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE--------------EEEEESSCCHHHHHHHTTC--
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC--------------EEEecCCCCHHHHHHHHHHHH
Confidence 112345678899999999999864 232 123568889999998887654
No 225
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.28 E-value=1.7e-06 Score=80.71 Aligned_cols=41 Identities=29% Similarity=0.515 Sum_probs=34.5
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeec
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (521)
++++||+||++|||+|+.+.|.++++.+.+. +.+.+..++.
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~-------~~v~~~~~~~ 65 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTAP-------QDVVLKQVPI 65 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTCC-------TTEEEEEEEC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHCC-------CCeEEEEEec
Confidence 5789999999999999999999999998875 2366666665
No 226
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.28 E-value=1.8e-06 Score=83.81 Aligned_cols=98 Identities=12% Similarity=0.147 Sum_probs=67.7
Q ss_pred HhcCCCCeEEEEEec-CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------------------
Q 009987 60 LRDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (521)
Q Consensus 60 l~~~~~~~vlV~FyA-~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (521)
+.+.+++++||.||+ +||++|+...|.+.++++++++. .+.++.|.++.
T Consensus 72 Lsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~------gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~ 145 (240)
T 3qpm_A 72 LSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAI------NTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPL 145 (240)
T ss_dssp GGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCE
T ss_pred HHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeE
Confidence 344456899999999 99999999999999999999753 37777777642
Q ss_pred --cccHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 115 --KINTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 115 --d~~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
|.+.++++.|||. .+|+++++ ++|++... .+......++.+++++.|..
T Consensus 146 l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~---------~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 146 LSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQI---------TMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp EECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHH
T ss_pred EeCchHHHHHHhCCccccCCCccceEEEEcCCCeEEEE---------EecCCCCCCCHHHHHHHHHH
Confidence 1234678888887 68987776 56654321 00011124567788777765
No 227
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.27 E-value=1.4e-06 Score=80.90 Aligned_cols=92 Identities=10% Similarity=-0.019 Sum_probs=62.4
Q ss_pred CCCeEEEEEec-CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------------------cccHH
Q 009987 64 PATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-----------------------KINTN 119 (521)
Q Consensus 64 ~~~~vlV~FyA-~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-----------------------d~~~~ 119 (521)
+++++||.||+ +||++|+..+|.+.++++++++. .+.++.|.++. |.+..
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~ 102 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKL------GVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGA 102 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHC------CCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchH
Confidence 35789999995 99999999999999999998642 37777776542 11234
Q ss_pred HHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccc----cCCHHHHHHHHHHhc
Q 009987 120 LCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQT 174 (521)
Q Consensus 120 l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G----~~~~~~L~~~i~~~l 174 (521)
+++.|+|. ..|+++++ ++|++. ..+.| .++.++|.+.|++..
T Consensus 103 ~~~~ygv~~~~~g~~~p~~~lID~~G~i~-------------~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 103 LTRNFDNMREDEGLADRATFVVDPQGIIQ-------------AIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp HHHHTTCEETTTTEECEEEEEECTTSBEE-------------EEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHhCCccCCCCceeeEEEEECCCCeEE-------------EEEecCCCCCCCHHHHHHHHHHHH
Confidence 56667776 25877766 355433 12222 236788888877654
No 228
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.25 E-value=9.6e-08 Score=87.17 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=69.5
Q ss_pred ceecCcc--cHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc----------
Q 009987 48 AVELNAT--NFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL---------- 114 (521)
Q Consensus 48 v~~L~~~--~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---------- 114 (521)
+...+++ ++.+...+ ++++++.|| ++||++|+...|.+.++.+++++. .+.++.|+.+.
T Consensus 16 l~~~~G~~v~Lsd~~~~--Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~------~v~vv~is~d~~~~~~~~~~~ 87 (164)
T 4gqc_A 16 LPNQDFEPVNLYEVLKR--GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKA------NAEVLAISVDSPWCLKKFKDE 87 (164)
T ss_dssp EEBTTSCEEEHHHHHHT--SSCEEEEECSCTTCCEECSSCEESCCCGGGGGGS------SSEEEEEESSCHHHHHHHHHH
T ss_pred eECCCCCEEEHHHHhcC--CCEEEEEEeCCCCCCCcccchhhhhhhHHHhhcc------CceEEEecCCCHHHHHHHHHh
Confidence 3344443 33444433 477888888 999999999999999999988753 36666676532
Q ss_pred ---------cccHHHHHhCCCC----------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 115 ---------KINTNLCDKFSVG----------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 115 ---------d~~~~l~~~f~I~----------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|.+.++++.|||. ..|+++++ ++|++... .......+..+.+++++.+++..
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~--------~~~~~~~~~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYK--------WVTDNPLNEPDYDEVVREANKIA 159 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEE--------EECSCTTCCCCHHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEE--------EEeCCCCCCCCHHHHHHHHHHHh
Confidence 3345677788873 35665555 56654311 00011223457788888777654
Q ss_pred c
Q 009987 175 S 175 (521)
Q Consensus 175 ~ 175 (521)
+
T Consensus 160 ~ 160 (164)
T 4gqc_A 160 G 160 (164)
T ss_dssp H
T ss_pred c
Confidence 3
No 229
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.23 E-value=1.5e-06 Score=78.65 Aligned_cols=45 Identities=9% Similarity=0.073 Sum_probs=35.8
Q ss_pred hcCCCCeEEEEEec-CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 61 RDTPATYAVVEFFA-NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 61 ~~~~~~~vlV~FyA-~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
.+.++++++|.||+ +||++|+...|.++++++++. .+.++.|+.+
T Consensus 38 ~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~~--------~v~vv~is~d 83 (163)
T 1psq_A 38 ADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGLD--------NTVVLTVSMD 83 (163)
T ss_dssp GGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--------TEEEEEEESS
T ss_pred HHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHcC--------CcEEEEEECC
Confidence 34456889999995 999999999999999988771 2677777654
No 230
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.22 E-value=2.5e-06 Score=79.30 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=28.6
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
++++||+||++|||+|+.+.|.+.++.+.+.
T Consensus 25 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (192)
T 3h93_A 25 GKIEVVELFWYGCPHCYAFEPTIVPWSEKLP 55 (192)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHhCC
Confidence 5789999999999999999999999998875
No 231
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.22 E-value=1.8e-06 Score=83.42 Aligned_cols=44 Identities=18% Similarity=0.332 Sum_probs=35.8
Q ss_pred CCCeEEEEEe-cCCChhHh-hhhHHHHHHHHHhCCCCCCCCCeE-EEEEeecc
Q 009987 64 PATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGII-LMTRVDCA 113 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~-~~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~ 113 (521)
++++++|.|| |+||++|+ ..+|.+.++++++++. .+ .++.|+.+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~------~~~~vv~is~d 78 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKY------GVDDILVVSVN 78 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHT------TCCEEEEEESS
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEEcC
Confidence 3478999999 99999999 9999999999998642 36 66666653
No 232
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.18 E-value=1.5e-06 Score=79.51 Aligned_cols=42 Identities=14% Similarity=0.244 Sum_probs=34.0
Q ss_pred CCeEEEEEe-cCCChhHhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEeec
Q 009987 65 ATYAVVEFF-ANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDC 112 (521)
Q Consensus 65 ~~~vlV~Fy-A~WCg~C~~-~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc 112 (521)
+++++|.|| ++||++|+. ..|.++++++++++. .+ .++.|+.
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~------gv~~vv~Is~ 75 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGK------GVDIIACMAV 75 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHT------TCCEEEEEES
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC------CCCEEEEEeC
Confidence 467888887 999999999 999999999998643 26 6666665
No 233
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.18 E-value=2e-06 Score=83.97 Aligned_cols=95 Identities=7% Similarity=0.064 Sum_probs=67.3
Q ss_pred CCe-EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------------------------cccH
Q 009987 65 ATY-AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL-------------------------KINT 118 (521)
Q Consensus 65 ~~~-vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~-------------------------d~~~ 118 (521)
+++ +|+.||++||++|..+.|.+.++++++.+. .+.++.|+++. |.+.
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~------gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRL------GVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhC------CcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 364 566889999999999999999999999743 38888888753 1245
Q ss_pred HHHHhCCCC-------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 119 NLCDKFSVG-------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 119 ~l~~~f~I~-------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+++.|||. ++|+++++ ++|++... .+....-+++.++|+..|+...
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~---------~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTM---------LYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEE---------EecCCcccchhHHHHHHHHHHH
Confidence 688999997 89987776 56654321 0001112368889988887643
No 234
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.17 E-value=1.4e-06 Score=79.14 Aligned_cols=105 Identities=10% Similarity=0.116 Sum_probs=62.3
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (521)
+..++++.+. +.+.++++++|.|| +.||++|+...|.+++++++ . .+.++.|..+.
T Consensus 31 l~~~~G~~~~--l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~--------~~~vv~is~d~~~~~~~~~~~~~ 99 (166)
T 3p7x_A 31 VLDNDLNQVT--LADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E--------EGIVLTISADLPFAQKRWCASAG 99 (166)
T ss_dssp EECTTSCEEE--GGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T--------TSEEEEEESSCHHHHHHHHHHHT
T ss_pred EEcCCCCEEe--HHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C--------CCEEEEEECCCHHHHHHHHHHcC
Confidence 4444444433 34445688999999 78999999999999998766 2 25666666532
Q ss_pred --------cc-cHHHHHhCCCCc------CceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHH
Q 009987 115 --------KI-NTNLCDKFSVGH------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWIN 171 (521)
Q Consensus 115 --------d~-~~~l~~~f~I~~------yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~ 171 (521)
|. +.++.+.|+|.. .|+++++ ++|++.... ......+..+.+++++.|+
T Consensus 100 ~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~--------~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 100 LDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKE--------IVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp CSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEE--------ECSBTTSCCCHHHHHHHHH
T ss_pred CCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEEE--------EcCCcccCCCHHHHHHHHh
Confidence 12 345666667664 6766665 455443210 0001223356677777664
No 235
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.14 E-value=8e-07 Score=74.22 Aligned_cols=70 Identities=17% Similarity=0.243 Sum_probs=46.6
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----cHHHHHhCCCCcC
Q 009987 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----NTNLCDKFSVGHY 129 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----~~~l~~~f~I~~y 129 (521)
.+++.+... .++.|+++|||+|+++.|.+++++..+ +.+ ..+|++.+. ...+.+.+++.++
T Consensus 4 ~~~~~i~~~----~v~~f~~~~C~~C~~~~~~L~~~~~~~--------~~~--~~vdi~~~~~~~~~~~~l~~~~g~~~v 69 (105)
T 1kte_A 4 FVNSKIQPG----KVVVFIKPTCPFCRKTQELLSQLPFKE--------GLL--EFVDITATSDTNEIQDYLQQLTGARTV 69 (105)
T ss_dssp HHHHHCCTT----CEEEEECSSCHHHHHHHHHHHHSCBCT--------TSE--EEEEGGGSTTHHHHHHHHHHHHSCCCS
T ss_pred HHHhhcccC----CEEEEEcCCCHhHHHHHHHHHHcCCCC--------Ccc--EEEEccCCCCHHHHHHHHHHHhCCCCc
Confidence 355555442 267899999999999999998764332 123 445554321 1357888999999
Q ss_pred ceEEEecCCcc
Q 009987 130 PMLLWGSPSKF 140 (521)
Q Consensus 130 PTl~~f~~g~~ 140 (521)
||+++ +|+.
T Consensus 70 P~i~~--~g~~ 78 (105)
T 1kte_A 70 PRVFI--GKEC 78 (105)
T ss_dssp CEEEE--TTEE
T ss_pred CeEEE--CCEE
Confidence 99844 4543
No 236
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.12 E-value=1.7e-06 Score=68.48 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=38.1
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-cHHHHHhCCCCcCceEEE
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-NTNLCDKFSVGHYPMLLW 134 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-~~~l~~~f~I~~yPTl~~ 134 (521)
++.|+++|||+|+...+.++++ . +.+..+|++.+. ..+..+++++.++||+++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~----~---------i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~ 56 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR----G---------FDFEMINVDRVPEAAEALRAQGFRQLPVVIA 56 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETTTCHHHHHHHHHTTCCSSCEEEE
T ss_pred EEEEcCCCChhHHHHHHHHHHC----C---------CCeEEEECCCCHHHHHHHHHhCCCccCEEEE
Confidence 6789999999999999988763 1 445677874321 122334699999999943
No 237
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.09 E-value=3.9e-06 Score=82.16 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=65.3
Q ss_pred HhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc-----------------------
Q 009987 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK----------------------- 115 (521)
Q Consensus 60 l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d----------------------- 115 (521)
+.+.+++++||.|| ++||++|....|.+.++++++++. .+.++.|.++..
T Consensus 86 Lsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~------gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~ 159 (254)
T 3tjj_A 86 LTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSI------NTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPL 159 (254)
T ss_dssp GGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCE
T ss_pred HHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHc------CCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccce
Confidence 34445688999999 999999999999999999999753 377777776421
Q ss_pred ---ccHHHHHhCCCC------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 116 ---INTNLCDKFSVG------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 116 ---~~~~l~~~f~I~------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
.+..+++.|+|. .+|+++++ ++|++... .+....-.++.+++++.|..
T Consensus 160 l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~---------~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 160 LSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQI---------TLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp EECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEEE---------EEECTTCCCCHHHHHHHHHH
T ss_pred eeCcHHHHHHHcCCccccCCCccceEEEECCCCeEEEE---------EecCCCCCCCHHHHHHHHHh
Confidence 134567777775 47876666 45544311 00001124567777777654
No 238
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.07 E-value=7.9e-06 Score=63.29 Aligned_cols=51 Identities=12% Similarity=0.242 Sum_probs=38.3
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH---HhCCCCcCceEEE
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC---DKFSVGHYPMLLW 134 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~---~~f~I~~yPTl~~ 134 (521)
++.|+++||++|++..+.++++ . +.+..+|.+ ++.++. +++++.++|++.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~---------i~~~~~di~--~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA----G---------LAYNTVDIS--LDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T---------CCCEEEETT--TCHHHHHHHHHTTCBCCCEEEE
T ss_pred EEEEeCCCChHHHHHHHHHHHc----C---------CCcEEEECC--CCHHHHHHHHHcCCCccCEEEE
Confidence 6789999999999999988864 1 445567764 233343 4899999999974
No 239
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.07 E-value=5.1e-06 Score=78.18 Aligned_cols=84 Identities=10% Similarity=0.182 Sum_probs=57.6
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------ 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------ 114 (521)
+..++++.+. +.+.++++++|.|| ++||++|+...|.++++++++. .+.++.|.++.
T Consensus 63 l~d~~G~~v~--L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~~--------~v~vv~Is~D~~~~~~~~~~~~~ 132 (200)
T 3zrd_A 63 LVAKDLSDVA--LSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELE--------NTVVLCISSDLPFAQSRFCGAEG 132 (200)
T ss_dssp EECTTSCEEE--GGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTST--------TEEEEEEESSCHHHHTTCTTTTT
T ss_pred EECCCCCEEc--HHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHhC--------CCEEEEEECCCHHHHHHHHHHcC
Confidence 3344444333 44445688999999 7899999999999999999882 26777776542
Q ss_pred --------cc-cHHHHHhCCCC---------cCceEEEe-cCCccc
Q 009987 115 --------KI-NTNLCDKFSVG---------HYPMLLWG-SPSKFV 141 (521)
Q Consensus 115 --------d~-~~~l~~~f~I~---------~yPTl~~f-~~g~~~ 141 (521)
|. +..+.+.|+|. ..|+++++ ++|++.
T Consensus 133 ~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~ 178 (200)
T 3zrd_A 133 LSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVI 178 (200)
T ss_dssp CTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEE
T ss_pred CCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCeEE
Confidence 22 45677778775 25877776 456543
No 240
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.05 E-value=5.3e-06 Score=75.04 Aligned_cols=43 Identities=9% Similarity=0.227 Sum_probs=34.3
Q ss_pred CCCeEEEEEe-cCCChhHh-hhhHHHHHHHHHhCCCCCCCCCeEE-EEEeec
Q 009987 64 PATYAVVEFF-ANWCPACR-NYKPQYEKVARLFNGPNAAHPGIIL-MTRVDC 112 (521)
Q Consensus 64 ~~~~vlV~Fy-A~WCg~C~-~~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc 112 (521)
++++++|.|| ++||++|+ ...|.+.++++++++.+ +. ++.|+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~------v~~vv~Is~ 79 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKG------VTEILCISV 79 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCCEEEEES
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCC------CCEEEEEEC
Confidence 3478999999 89999999 99999999999986432 44 555554
No 241
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.05 E-value=1.7e-05 Score=74.06 Aligned_cols=31 Identities=35% Similarity=0.805 Sum_probs=28.3
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
++++||+||++|||||+++.|.++++.+.+.
T Consensus 24 ~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~ 54 (193)
T 3hz8_A 24 GKVEVLEFFGYFCPHCAHLEPVLSKHAKSFK 54 (193)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 5789999999999999999999999988764
No 242
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.03 E-value=5.2e-06 Score=75.18 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=36.0
Q ss_pred HhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeec
Q 009987 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 60 l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (521)
+.+.+++++||.|| ++||++|+..+|.+.++++++. .+.++.|+.
T Consensus 38 l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~--------~v~vv~Is~ 83 (165)
T 1q98_A 38 LNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKLS--------NTIVLCISA 83 (165)
T ss_dssp GGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHST--------TEEEEEEES
T ss_pred hHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHcC--------CCEEEEEeC
Confidence 33445688999999 8999999999999999999872 266666665
No 243
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.03 E-value=4.9e-06 Score=77.37 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=32.5
Q ss_pred CCe-EEEEEecCCChhHhh-hhHHHHHHHHHhCCCCCCCCCeEE-EEEeecc
Q 009987 65 ATY-AVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGIIL-MTRVDCA 113 (521)
Q Consensus 65 ~~~-vlV~FyA~WCg~C~~-~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~ 113 (521)
+++ +|+.||++|||+|+. .+|.++++++++++.+ +. ++.|+.+
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~g------v~~vv~Is~d 101 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARG------VDDIAVVAVN 101 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTT------CCEEEEEESS
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcC------CCEEEEEECC
Confidence 354 455566999999999 7999999999997533 55 6666653
No 244
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.02 E-value=2.7e-05 Score=67.61 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=74.0
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
+..| +.++++..+... .+++|-|+++||++| .+.|.++|+.+. .+.|+.++ +.++..+|++
T Consensus 23 ~~~i~s~~e~e~fi~~~--~v~VVGfF~~~~~~~---~~~F~~~A~~~~--------d~~F~~t~-----~~~v~~~~~v 84 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAAT--EVAVIGFFQDLEIPA---VPILHSMVQKFP--------GVSFGIST-----DSEVLTHYNI 84 (124)
T ss_dssp CEECCSHHHHHHHHHTS--SEEEEEECSCTTSTH---HHHHHHHHHHCT--------TSEEEEEC-----CHHHHHHTTC
T ss_pred ceEcCCHHHHHHHHhcC--CCEEEEEECCCCChh---HHHHHHHHHhCC--------CceEEEEC-----hHHHHHHcCC
Confidence 4445 457888888653 778999999999998 679999999982 37888876 4679999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhccc----cCCHHHHHHHHHHh
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED----WQTADGLLTWINKQ 173 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G----~~~~~~L~~~i~~~ 173 (521)
. .|++.+|++.. +....|.| ..+.+.|.+||..+
T Consensus 85 ~-~~~vvlfkkfd------------e~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 85 T-GNTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp C-SSCEEEEETTT------------TEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred C-CCeEEEEEcCC------------CCceeecCcccCCCCHHHHHHHHHHh
Confidence 9 89999998641 11234665 67999999999865
No 245
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.02 E-value=3.9e-06 Score=71.56 Aligned_cols=61 Identities=20% Similarity=0.163 Sum_probs=43.1
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-----cHHHHHhCCCCcCceEEEecCCcc
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-----NTNLCDKFSVGHYPMLLWGSPSKF 140 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-----~~~l~~~f~I~~yPTl~~f~~g~~ 140 (521)
.++.|+++|||+|+...+.++++.... +. +..+|++.+. ...+.+.+|++++|++++ +|+.
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~--------~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR--------GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT--------TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc--------Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 478899999999999999887642210 11 5667775332 146888999999999854 4544
No 246
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.01 E-value=4.9e-06 Score=76.61 Aligned_cols=34 Identities=15% Similarity=0.231 Sum_probs=27.1
Q ss_pred CCCeEEEEE-ecCCChhHh-hhhHHHHHHHHHhCCC
Q 009987 64 PATYAVVEF-FANWCPACR-NYKPQYEKVARLFNGP 97 (521)
Q Consensus 64 ~~~~vlV~F-yA~WCg~C~-~~~P~~~~lA~~~~~~ 97 (521)
++++++|.| |++||++|+ ..+|.+.++++++++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~ 77 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK 77 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 346555555 599999999 5999999999999754
No 247
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.00 E-value=1.3e-05 Score=76.61 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=75.5
Q ss_pred ceec-CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 48 AVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 48 v~~L-~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
+++| +.+++++.+... .+++|.||++| |....|+|.++|+.+. .+.|+... +.++|.+|+|
T Consensus 11 ~~~l~s~~~~~~~l~~~--~v~vVgff~~~---~~~~~~~f~~~A~~l~--------~~~F~~t~-----~~~v~~~~~v 72 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAAT--EVAVIGFFQDL---EIPAVPILHSMVQKFP--------GVSFGIST-----DSEVLTHYNI 72 (227)
T ss_dssp CEECCSHHHHHHHHHTS--SEEEEEECSCS---CSTHHHHHHHHTTTCT--------TSEEEEEC-----CHHHHHHTTC
T ss_pred CeeeCCHHHHHHHHhcC--CeEEEEEecCC---CchhHHHHHHHHHhCC--------CceEEEEC-----CHHHHHHcCC
Confidence 4444 668999988764 78899999999 5689999999999883 26777644 5789999999
Q ss_pred CcCceEEEecCCcccCCCCCCCccchhhhhcc----ccCCHHHHHHHHHHhccc
Q 009987 127 GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE----DWQTADGLLTWINKQTSR 176 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~----G~~~~~~L~~~i~~~l~~ 176 (521)
++ |++++|+++. +....|. |.++.++|.+||.++..+
T Consensus 73 ~~-p~i~lfk~~~------------~~~~~~~~~~~g~~~~~~l~~fi~~~~~p 113 (227)
T 4f9z_D 73 TG-NTICLFRLVD------------NEQLNLEDEDIESIDATKLSRFIEINSLH 113 (227)
T ss_dssp CS-SEEEEEETTT------------TEEEEECHHHHHTCCHHHHHHHHHHHCCC
T ss_pred CC-CeEEEEEecC------------cccccccccccCCCCHHHHHHHHHHhCCC
Confidence 98 9999998531 1112355 579999999999988643
No 248
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.97 E-value=7.3e-07 Score=83.99 Aligned_cols=42 Identities=24% Similarity=0.537 Sum_probs=36.5
Q ss_pred CCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 65 ATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
++++||+||+.|||||+++.|.| +++++.+. +.|.|..++.+
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~-------~~v~~~~~~v~ 157 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP-------EGVKMTKYHVN 157 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC-------TTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCC-------CCCEEEEeccC
Confidence 46789999999999999999999 99888874 35889999975
No 249
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.96 E-value=1.7e-05 Score=73.67 Aligned_cols=32 Identities=25% Similarity=0.676 Sum_probs=28.8
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
.++++|++||.+|||+|+.+.|.+.++.+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALP 52 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCC
Confidence 35778999999999999999999999998874
No 250
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.92 E-value=2.1e-05 Score=71.87 Aligned_cols=62 Identities=11% Similarity=0.202 Sum_probs=43.7
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh-hHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg-~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
..+...+++.+. +.+.+++++||.||++||+ .|....+.+.++.+.+.+.+ ..|.++.|.++
T Consensus 15 F~L~d~~G~~v~--l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~----~~v~~v~isvD 77 (170)
T 4hde_A 15 FQFTNQDGKPFG--TKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEK----LDVQFVSFSVD 77 (170)
T ss_dssp CEEECTTSCEEE--HHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTT----CCCEEEEEESC
T ss_pred cEEECCCCCEEe--HHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhccc----ccceeEeeecC
Confidence 345555555444 2333568999999999996 79999999999988886432 34667766653
No 251
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.90 E-value=3.5e-06 Score=73.78 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=46.7
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-cH----HHHHhCCCC
Q 009987 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-NT----NLCDKFSVG 127 (521)
Q Consensus 53 ~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-~~----~l~~~f~I~ 127 (521)
.+.++..+... . ++.|+++|||+|+.+.+.++++. +.+..+|++.+. +. .+.+.+++.
T Consensus 17 ~~~~~~~i~~~--~--vvvf~~~~Cp~C~~~~~~L~~~~-------------i~~~~vdid~~~~~~~~~~~l~~~~g~~ 79 (130)
T 2cq9_A 17 VNQIQETISDN--C--VVIFSKTSCSYCTMAKKLFHDMN-------------VNYKVVELDLLEYGNQFQDALYKMTGER 79 (130)
T ss_dssp HHHHHHHHHHS--S--EEEEECSSCSHHHHHHHHHHHHT-------------CCCEEEETTTSTTHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHcCC--c--EEEEEcCCChHHHHHHHHHHHcC-------------CCcEEEECcCCcCcHHHHHHHHHHhCCC
Confidence 45566677653 2 44599999999999999998753 223345554321 12 478899999
Q ss_pred cCceEEEecCCcc
Q 009987 128 HYPMLLWGSPSKF 140 (521)
Q Consensus 128 ~yPTl~~f~~g~~ 140 (521)
++|++++ +|+.
T Consensus 80 ~vP~l~i--~G~~ 90 (130)
T 2cq9_A 80 TVPRIFV--NGTF 90 (130)
T ss_dssp CSSEEEE--TTEE
T ss_pred CcCEEEE--CCEE
Confidence 9999954 4543
No 252
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.87 E-value=4.9e-06 Score=74.49 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=47.7
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc-ccH----HHHHhCCCC
Q 009987 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-INT----NLCDKFSVG 127 (521)
Q Consensus 53 ~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~~~----~l~~~f~I~ 127 (521)
.+.++..+.+. . ++.|+++|||+|+...+.++++.. .+..+|++.+ ++. .+.+.+++.
T Consensus 39 ~~~~~~~i~~~---~-Vvvf~~~~Cp~C~~~k~~L~~~~i-------------~~~~vdId~~~~~~~~~~~L~~~~g~~ 101 (146)
T 2ht9_A 39 VNQIQETISDN---C-VVIFSKTSCSYCTMAKKLFHDMNV-------------NYKVVELDLLEYGNQFQDALYKMTGER 101 (146)
T ss_dssp HHHHHHHHHHC---S-EEEEECTTCHHHHHHHHHHHHHTC-------------CCEEEEGGGCTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCC---C-EEEEECCCChhHHHHHHHHHHcCC-------------CeEEEECccCcCCHHHHHHHHHHhCCC
Confidence 45667777653 2 455999999999999999987632 2334555433 112 478899999
Q ss_pred cCceEEEecCCccc
Q 009987 128 HYPMLLWGSPSKFV 141 (521)
Q Consensus 128 ~yPTl~~f~~g~~~ 141 (521)
++|++++ +|+..
T Consensus 102 tvP~ifi--~G~~i 113 (146)
T 2ht9_A 102 TVPRIFV--NGTFI 113 (146)
T ss_dssp CSCEEEE--TTEEE
T ss_pred CcCeEEE--CCEEE
Confidence 9999954 55443
No 253
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.86 E-value=5.2e-05 Score=69.06 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=27.9
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHh
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLF 94 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~ 94 (521)
.+++.|++|+..|||+|+.+.|.+.++.+++
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 3567899999999999999999999988887
No 254
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.81 E-value=1.8e-05 Score=71.93 Aligned_cols=65 Identities=12% Similarity=0.252 Sum_probs=48.1
Q ss_pred HhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc-ccHHHHHhCCCCcCceE
Q 009987 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-INTNLCDKFSVGHYPML 132 (521)
Q Consensus 60 l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~~~~l~~~f~I~~yPTl 132 (521)
+.+.++++++|.|| ++||++|+...|.+.++.+++. .+.++.|.++.. ...+.++++++..+|.+
T Consensus 42 l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~~--------~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l 108 (171)
T 2yzh_A 42 VGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGME--------GVDVTVVSMDLPFAQKRFCESFNIQNVTVA 108 (171)
T ss_dssp ESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTCT--------TEEEEEEESSCHHHHHHHHHHTTCCSSEEE
T ss_pred HHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHcC--------CceEEEEeCCCHHHHHHHHHHcCCCCeEEe
Confidence 34445688999999 8999999999999999988771 277777876432 23456778888656643
No 255
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.81 E-value=0.00012 Score=74.62 Aligned_cols=118 Identities=17% Similarity=0.104 Sum_probs=85.4
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH---
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC--- 121 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~--- 121 (521)
.+.+.++|.+++........++..++.|+.+||++|..+.+.++++|+++++. ..+.|+.+|++ ....++
T Consensus 225 ~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~-----~~~~f~~id~~--~~~~~~~~~ 297 (350)
T 1sji_A 225 RPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDN-----PDLSIVWIDPD--DFPLLVAYW 297 (350)
T ss_dssp CCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGC-----SSCCEEEECGG--GCHHHHHHH
T ss_pred ccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCC-----CceEEEEECch--hhHHHHHHH
Confidence 34588899999988765432233456699999999999999999999999731 25889999984 567788
Q ss_pred -HhCCCC-cCceEEEecCCcccCCCCCCCccchh-hhhccccCCHHHHHHHHHHhcccC
Q 009987 122 -DKFSVG-HYPMLLWGSPSKFVAGSWEPNQEKKE-IRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 122 -~~f~I~-~yPTl~~f~~g~~~~~~~~~~~~~~~-v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
+.|||. ++|++.++...+-. .... .....|..+.++|.+|+++.+...
T Consensus 298 ~~~~gi~~~~P~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~i~~F~~d~~~Gk 348 (350)
T 1sji_A 298 EKTFKIDLFKPQIGVVNVTDAD--------SVWMEIPDDDDLPTAEELEDWIEDVLSGK 348 (350)
T ss_dssp HHHCCSCTTSCEEEEEESSSSC--------EEESCSSCCSCCCCHHHHHHHHHHHHTSC
T ss_pred HhhcCCCccCCcEEEEeccccc--------ccccCCCcccccCCHHHHHHHHHHHhcCc
Confidence 899998 58999998642100 0000 011135789999999999987643
No 256
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.79 E-value=6.4e-05 Score=69.47 Aligned_cols=31 Identities=23% Similarity=0.488 Sum_probs=27.9
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
+++.|++|+.+|||+|..+.|.+.++.+.+.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQA 55 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcC
Confidence 4678999999999999999999999988764
No 257
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.79 E-value=7.6e-05 Score=71.46 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=33.6
Q ss_pred eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 67 ~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
.+|+.|+++||++|....|.+.++++++.+. .+.++.|.++
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~IS~D 74 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKR------NVKLIALSID 74 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTT------TEEEEEEESS
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHC------CCEEEEEcCC
Confidence 4566678999999999999999999999753 3777777764
No 258
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.78 E-value=2.4e-05 Score=74.76 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=59.8
Q ss_pred eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--------------------------ccHHH
Q 009987 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--------------------------INTNL 120 (521)
Q Consensus 67 ~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--------------------------~~~~l 120 (521)
.+|+.|+|+||+.|....|.+.++++++++. .+.++.|.++.. .+..+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~------~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~v 107 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKL------NCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESREL 107 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTT------TEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHc------CCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHH
Confidence 4455568999999999999999999999753 377888876421 12345
Q ss_pred HHhCCCC------------cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 121 CDKFSVG------------HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 121 ~~~f~I~------------~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
++.||+. .+|+++++ ++|++... .+.....+++.++|+..|+...
T Consensus 108 a~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~---------~~~~~~~g~~~~ell~~i~~lq 165 (220)
T 1xcc_A 108 ANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKAT---------VLYPATTGRNAHEILRVLKSLQ 165 (220)
T ss_dssp HHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEE---------EEECTTBCCCHHHHHHHHHHHH
T ss_pred HHHhCCCCcccccCCCCCcccceEEEECCCCEEEEE---------EecCCCCCCCHHHHHHHHHHHH
Confidence 6667763 35766665 44543310 0001123578888888887643
No 259
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.78 E-value=4.2e-05 Score=68.46 Aligned_cols=82 Identities=20% Similarity=0.379 Sum_probs=59.7
Q ss_pred CCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEee------------------cc------------
Q 009987 64 PATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD------------------CA------------ 113 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD------------------c~------------ 113 (521)
.++.+||+|+.++||+|+++.+.++++ . .+.+..++ |+
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--------~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~ 80 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM----T--------DVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMR 80 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC----C--------SEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc----C--------ceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHh
Confidence 357789999999999999999988754 1 13332211 11
Q ss_pred --------------ccccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 114 --------------LKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 114 --------------~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+++.++++++||+++||+++ .+|+ .+.|..+.+.|.++|++..
T Consensus 81 ~g~~~~~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~----------------~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 81 KGKFPVGGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR----------------TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp HCCCCTTCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC----------------EEESCCCTTHHHHHHHHTS
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE----------------EeeCCCCHHHHHHHHHHHH
Confidence 124677899999999999987 4442 3568888999999998765
No 260
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.76 E-value=1e-05 Score=69.60 Aligned_cols=67 Identities=10% Similarity=0.177 Sum_probs=46.4
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-----HHHHHhCCCC
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVG 127 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~f~I~ 127 (521)
+.+++.+... + ++.|+++|||+|++. .+.++++.. ..+.+..+|.+.+.+ ..+.+.+|++
T Consensus 16 ~~~~~~i~~~--~--Vvvf~~~~Cp~C~~alk~~L~~~~~----------~~i~~~~vdid~~~~~~~~~~~l~~~~g~~ 81 (118)
T 3c1r_A 16 KHVKDLIAEN--E--IFVASKTYCPYCHAALNTLFEKLKV----------PRSKVLVLQLNDMKEGADIQAALYEINGQR 81 (118)
T ss_dssp HHHHHHHHHS--S--EEEEECSSCHHHHHHHHHHHTTSCC----------CGGGEEEEEGGGSTTHHHHHHHHHHHHSCC
T ss_pred HHHHHHHccC--c--EEEEEcCCCcCHHHHHHHHHHHcCC----------CCCCeEEEECccCCChHHHHHHHHHHhCCC
Confidence 4566666653 2 677999999999998 777765431 125566777754322 3688889999
Q ss_pred cCceEEE
Q 009987 128 HYPMLLW 134 (521)
Q Consensus 128 ~yPTl~~ 134 (521)
++|++++
T Consensus 82 tvP~vfi 88 (118)
T 3c1r_A 82 TVPNIYI 88 (118)
T ss_dssp SSCEEEE
T ss_pred CcCEEEE
Confidence 9999844
No 261
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.75 E-value=5.1e-05 Score=73.22 Aligned_cols=42 Identities=10% Similarity=0.195 Sum_probs=35.3
Q ss_pred CeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc
Q 009987 66 TYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA 113 (521)
Q Consensus 66 ~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~ 113 (521)
+++||.|| ++||+.|....|.+.++++++.+. .+.++.|.++
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~------~v~vigIS~D 72 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKR------GVKLIALSCD 72 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHT------TEEEEEEESS
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHc------CCEEEEEcCC
Confidence 38899998 999999999999999999998643 3777777764
No 262
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.72 E-value=3.3e-05 Score=62.30 Aligned_cols=57 Identities=12% Similarity=0.380 Sum_probs=42.5
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC-CCCcCceEEEecCCcc
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF-SVGHYPMLLWGSPSKF 140 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f-~I~~yPTl~~f~~g~~ 140 (521)
++.|+++||++|+...+.+++.. +.+..+|++.+...++.+.+ ++.++|++++ +|+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~~-------------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~~ 65 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKKG-------------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI--GDYH 65 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHHT-------------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC-------------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCEE
Confidence 78899999999999999888642 33455665323456788889 9999999854 5543
No 263
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.71 E-value=1.9e-05 Score=72.27 Aligned_cols=60 Identities=10% Similarity=0.149 Sum_probs=45.2
Q ss_pred CeEEEEEecCCChhHhhh-hHHHHHHHHHhCCCCCCCCCeEE-EEEeeccc-cccHHHHHhCCCC-cCce
Q 009987 66 TYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIIL-MTRVDCAL-KINTNLCDKFSVG-HYPM 131 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~-~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~~-d~~~~l~~~f~I~-~yPT 131 (521)
+++|+.||++||++|+.. +|.+.++++++++.+ +. ++.|+.+. +.....++++++. .||.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g------~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~ 108 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKG------VDSVICVAINDPYTVNAWAEKIQAKDAIEF 108 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTT------CSEEEEEESSCHHHHHHHHHHTTCTTTSEE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCC------CCEEEEEeCCCHHHHHHHHHHhCCCCceEE
Confidence 467889999999999999 999999999986432 55 67776532 2345677888884 6773
No 264
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=97.70 E-value=4.2e-05 Score=71.14 Aligned_cols=30 Identities=30% Similarity=0.748 Sum_probs=25.5
Q ss_pred CeEEEEEecCCChhHhhhhHHH---HHHHHHhC
Q 009987 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFN 95 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~ 95 (521)
++++|+||+.|||||+++.|.+ .++.+.+.
T Consensus 15 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~ 47 (189)
T 3l9v_A 15 APAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLP 47 (189)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCC
T ss_pred CCEEEEEECCCChhHHHHhHhccchHHHHHhCC
Confidence 5679999999999999999987 57776654
No 265
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.61 E-value=0.00024 Score=64.70 Aligned_cols=31 Identities=26% Similarity=0.726 Sum_probs=28.1
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
++++||+|+.-.||||+++.|.+.++.+++.
T Consensus 21 ~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~ 51 (184)
T 4dvc_A 21 SSPVVSEFFSFYCPHCNTFEPIIAQLKQQLP 51 (184)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEEECCCCHhHHHHhHHHHHHHhhcC
Confidence 4678999999999999999999999988875
No 266
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.60 E-value=0.00023 Score=69.03 Aligned_cols=107 Identities=15% Similarity=0.215 Sum_probs=78.3
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
+++.+|+ .+.++..+... .+++|-|+++| |....+.|.++|+.+++ .+.|+.+. +.+++.+|
T Consensus 6 P~v~~l~s~~~~~~~l~~~--~v~vvgff~~~---~~~~~~~f~~~A~~lr~-------~~~F~~~~-----~~~v~~~~ 68 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFISDK--DASIVGFFDDS---FSEAHSEFLKAASNLRD-------NYRFAHTN-----VESLVNEY 68 (252)
T ss_dssp CCEEECCSHHHHHHHHTSS--SCEEEEEESCT---TSHHHHHHHHHHHHTTT-------TSCEEEEC-----CHHHHHHH
T ss_pred CCceeecCHHHHHHHhhcC--CeEEEEEECCC---CChHHHHHHHHHHhccc-------CcEEEEEC-----hHHHHHHh
Confidence 4477785 56677777653 56799999998 45677899999999963 46777764 46799999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhc-cccCCHHHHHHHHHHhccc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRAL-EDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~-~G~~~~~~L~~~i~~~l~~ 176 (521)
+|.+ |++++|++++..+. ..+....| .|..+.++|.+||..+.-+
T Consensus 69 ~~~~-p~i~~fk~~~~~~k------f~e~~~~y~~g~~~~~~l~~fi~~~~~P 114 (252)
T 2h8l_A 69 DDNG-EGIILFRPSHLTNK------FEDKTVAYTEQKMTSGKIKKFIQENIFG 114 (252)
T ss_dssp CSSS-EEEEEECCGGGCCT------TSCSEEECCCSSCCHHHHHHHHHHHSSC
T ss_pred CCCC-CcEEEEcchhhccc------ccccccccCCCCcCHHHHHHHHHhcccC
Confidence 9997 99999987532210 00122457 8889999999999987643
No 267
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.59 E-value=7e-05 Score=71.71 Aligned_cols=106 Identities=7% Similarity=0.103 Sum_probs=64.8
Q ss_pred ceecCcccHHHHHhcCCCCeEEEEEecCC-ChhHh-----hhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-------
Q 009987 48 AVELNATNFDAVLRDTPATYAVVEFFANW-CPACR-----NYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------- 114 (521)
Q Consensus 48 v~~L~~~~f~~~l~~~~~~~vlV~FyA~W-Cg~C~-----~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------- 114 (521)
+...+...+. +.+.+++++||.||++| ||+|. ...|.+.++ +. + +.|+.|+.+.
T Consensus 33 L~d~~G~~vs--Lsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~-------g-v~VvgIS~Ds~~~~~~f 99 (224)
T 3keb_A 33 LVDDQKHDAA--LESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP-------H-LKLIVITVDSPSSLARA 99 (224)
T ss_dssp EEETTSCEEE--GGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT-------T-SEEEEEESSCHHHHHHH
T ss_pred EECCCCCEEe--HHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC-------C-CEEEEEECCCHHHHHHH
Confidence 3344444332 34445678999999999 99999 888888776 32 2 5566665432
Q ss_pred -------------cc-cHHHHHhCCCCc---------CceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 115 -------------KI-NTNLCDKFSVGH---------YPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 115 -------------d~-~~~l~~~f~I~~---------yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
|. +..+++.|||.. .|+++++ ++|++... .....+.+..+.+++++.|
T Consensus 100 ~~~~gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~--------~~~~~~~~~pd~~evl~~L 171 (224)
T 3keb_A 100 RHEHGLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYS--------ERLANTRDFFDFDAIEKLL 171 (224)
T ss_dssp HHHHCCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEE--------EECSBTTCCCCHHHHHHHH
T ss_pred HHHcCCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEE--------EecCCCCCCCCHHHHHHHH
Confidence 22 357788888764 6776666 46654321 0111234456788888877
Q ss_pred HHhc
Q 009987 171 NKQT 174 (521)
Q Consensus 171 ~~~l 174 (521)
.+..
T Consensus 172 ~~l~ 175 (224)
T 3keb_A 172 QEGE 175 (224)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 6543
No 268
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.54 E-value=0.00024 Score=73.02 Aligned_cols=102 Identities=10% Similarity=0.156 Sum_probs=77.2
Q ss_pred CcceecC-cccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 46 DHAVELN-ATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 46 ~~v~~L~-~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
+.+..++ .++++..+... +.+++|.||++||+ ...+.|.++|..+. +.+.|+.++ +.+++++|
T Consensus 125 ~~v~~i~~~~~~~~~~~~~-~~~~vv~ff~~~~~---~~~~~f~~~A~~~~-------~~~~F~~~~-----~~~~~~~~ 188 (367)
T 3us3_A 125 DPVELIEGERELQAFENIE-DEIKLIGYFKNKDS---EHYKAFKEAAEEFH-------PYIPFFATF-----DSKVAKKL 188 (367)
T ss_dssp CSEEECCSHHHHHHHHHCC-SSCEEEEECSCTTC---HHHHHHHHHHHHHT-------TTSCEEEEC-----CHHHHHHH
T ss_pred CCcEEcCCHHHHHHHhccC-CCcEEEEEECCCCc---hHHHHHHHHHHhhc-------CCcEEEEEC-----CHHHHHHc
Confidence 3466774 57888888722 26689999999966 56789999999996 347788776 35799999
Q ss_pred CCCcCceEEEecCCcccCCCCCCCccchhhhhcccc-CCHHHHHHHHHHhccc
Q 009987 125 SVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDW-QTADGLLTWINKQTSR 176 (521)
Q Consensus 125 ~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~-~~~~~L~~~i~~~l~~ 176 (521)
+|.+ |++++|+++. .....|.|. ++.++|.+||.++.-+
T Consensus 189 ~v~~-p~i~lf~~~~------------~~~~~y~g~~~~~~~l~~fi~~~~~p 228 (367)
T 3us3_A 189 TLKL-NEIDFYEAFM------------EEPVTIPDKPNSEEEIVNFVEEHRRS 228 (367)
T ss_dssp TCCT-TCEEEECTTC------------SSCEECSSSSCCHHHHHHHHHHTCSC
T ss_pred CCCC-CeEEEEcCCC------------CCCeecCCCCCCHHHHHHHHHHcCcc
Confidence 9996 9999998641 112457774 9999999999987643
No 269
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.51 E-value=3.6e-05 Score=62.38 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=49.5
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc-cc----HHHHHhCCCCcCceEEEecCCcccCC
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK-IN----TNLCDKFSVGHYPMLLWGSPSKFVAG 143 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d-~~----~~l~~~f~I~~yPTl~~f~~g~~~~~ 143 (521)
++.|+++||++|++..+.++++.-. +....||-..+ ++ .++.+.+++.++|++++ +|+
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~-----------~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~---- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVD-----------FEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDK---- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCC-----------CEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTE----
T ss_pred EEEEECCCChHHHHHHHHHHHcCCC-----------cEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCE----
Confidence 6779999999999999888875322 23333332111 22 56778899999999987 332
Q ss_pred CCCCCccchhhhhccccCCHHHHHHHHH
Q 009987 144 SWEPNQEKKEIRALEDWQTADGLLTWIN 171 (521)
Q Consensus 144 ~~~~~~~~~~v~~~~G~~~~~~L~~~i~ 171 (521)
..++.+.+.|.++|+
T Consensus 77 -------------~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 -------------HVLGYNEEKLKELIR 91 (92)
T ss_dssp -------------EEESCCHHHHHHHHH
T ss_pred -------------EEeCCCHHHHHHHhc
Confidence 223468888888874
No 270
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.49 E-value=0.00066 Score=62.60 Aligned_cols=108 Identities=9% Similarity=0.132 Sum_probs=76.3
Q ss_pred cCcccHHHHHhcC------CCCeEEEEEecCCChhHhhhhHHH---HHHHHHhCCCCCCCCCeEEEEEeeccccccH---
Q 009987 51 LNATNFDAVLRDT------PATYAVVEFFANWCPACRNYKPQY---EKVARLFNGPNAAHPGIILMTRVDCALKINT--- 118 (521)
Q Consensus 51 L~~~~f~~~l~~~------~~~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~--- 118 (521)
.-..+|++++... ..|+++|+++++||..|..|.-.. +++.+.++ .++.+...|.+.+++.
T Consensus 35 F~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~-------~nfV~w~~dv~~~e~~~~~ 107 (178)
T 2ec4_A 35 FFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLS-------QNFITWAWDLTKDSNRARF 107 (178)
T ss_dssp CCCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHH-------HTEEEEEEECCSHHHHHHH
T ss_pred eeeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHH-------cCEEEEEEeCCCchhhhhh
Confidence 3466788877554 468999999999999999998443 44555554 2477888898755522
Q ss_pred ----------HHHH---hCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 119 ----------NLCD---KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 119 ----------~l~~---~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.++. .|++.+||++.++.+. ++ .-+.+.++.|..+++++++.+.+.+
T Consensus 108 ~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~---~~------~~~vl~~~~G~~~~~~ll~~L~~~~ 167 (178)
T 2ec4_A 108 LTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGK---RS------SNEVLNVIQGNTTVDELMMRLMAAM 167 (178)
T ss_dssp HHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCC---SS------CCCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcC---CC------ceEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3443 4999999999997432 00 1134567889999999998876654
No 271
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00027 Score=67.21 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=66.4
Q ss_pred HhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------------------
Q 009987 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (521)
Q Consensus 60 l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (521)
+.+.+++++++.|| +.||+.|....+.+.+.+.++++. .+.++.|.++.
T Consensus 47 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~------g~~vigiS~Ds~~sh~aw~~~~~~~~~~~~l~fpl 120 (216)
T 3sbc_A 47 LDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQ------GAQVLFASTDSEYSLLAWTNIPRKEGGLGPINIPL 120 (216)
T ss_dssp GGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHT------TEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCE
T ss_pred hHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccC------CceEEEeecCchhhHHHHHHHHHHhCCccCcccce
Confidence 45556789999999 999999999999999999999753 37777787652
Q ss_pred --cccHHHHHhCCCC----c--CceEEE-ecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 115 --KINTNLCDKFSVG----H--YPMLLW-GSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 115 --d~~~~l~~~f~I~----~--yPTl~~-f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
|.+.++++.|||- + ++.+++ -++|++.- ..+....-+|+.++++..|+.
T Consensus 121 lsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~---------~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 121 LADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRH---------ITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp EECTTSHHHHHHTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTBCCCHHHHHHHHHH
T ss_pred EeCCCCHHHHHcCCeeccCCceeeEEEEECCCCeEEE---------EEEcCCCCCCCHHHHHHHHHH
Confidence 2345678888872 2 343433 35554321 112222345888988877754
No 272
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.43 E-value=0.00045 Score=66.95 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=78.7
Q ss_pred cCcceecCc-ccHHHHHhc-CCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHH
Q 009987 45 VDHAVELNA-TNFDAVLRD-TPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCD 122 (521)
Q Consensus 45 ~~~v~~L~~-~~f~~~l~~-~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~ 122 (521)
.+++..|+. ++++..+.. . .+++|-|++++| ....+.|.++|+.++ +.+.|+.+. +.+++.
T Consensus 5 gP~v~~l~s~~~~~~~~~~~~--~v~vVgff~~~~---~~~~~~F~~~A~~lr-------~~~~F~~t~-----~~~v~~ 67 (250)
T 3ec3_A 5 SPPSKEILTLKQVQEFLKDGD--DVVILGVFQGVG---DPGYLQYQDAANTLR-------EDYKFHHTF-----STEIAK 67 (250)
T ss_dssp CCSSEECCCHHHHHHHHHHCS--SCEEEEECSCTT---CHHHHHHHHHHHHHT-------TTCCEEEEC-----CHHHHH
T ss_pred CCCceecCCHHHHHHHHhcCC--CeEEEEEEcCCC---chHHHHHHHHHHhhh-------cCcEEEEEC-----cHHHHH
Confidence 345777754 788887765 4 668999999984 578889999999996 347787765 467899
Q ss_pred hCCCCcCceEEEecCCcccCCCCCCCccchhhhhcc--ccCCHHHHHHHHHHhccc
Q 009987 123 KFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALE--DWQTADGLLTWINKQTSR 176 (521)
Q Consensus 123 ~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~--G~~~~~~L~~~i~~~l~~ 176 (521)
+|+|.+ |++++|+++...+. -.+....|. |..+.++|.+||..+.-+
T Consensus 68 ~~~v~~-p~ivlfk~~~~~~k------fde~~~~y~g~~~~~~~~l~~fi~~~~~P 116 (250)
T 3ec3_A 68 FLKVSL-GKLVLMQPEKFQSK------YEPRMHVMDVQGSTEASAIKDYVVKHALP 116 (250)
T ss_dssp HHTCCS-SEEEEECCGGGCCT------TSCSCEEEECCTTSCHHHHHHHHHHHSSC
T ss_pred HcCCCC-CeEEEEecchhhcc------ccccceeccCCCCCCHHHHHHHHHHcCCC
Confidence 999998 99999987532210 001123466 478999999999987543
No 273
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.41 E-value=0.00016 Score=57.79 Aligned_cols=56 Identities=18% Similarity=0.140 Sum_probs=39.6
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCCC-----CcCceEEE
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSV-----GHYPMLLW 134 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~I-----~~yPTl~~ 134 (521)
.++.|+++|||+|++..+.++++.. .+.+..||...+ ...++.+.+|. .++|++++
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~i-----------~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENNI-----------AFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTC-----------CCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE
T ss_pred EEEEEEcCCChhHHHHHHHHHHcCC-----------CceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE
Confidence 3788999999999999887765421 144556665322 12457788888 99999965
No 274
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.41 E-value=0.00018 Score=60.05 Aligned_cols=69 Identities=13% Similarity=0.147 Sum_probs=45.6
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc--HHHHHhCCC
Q 009987 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDKFSV 126 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~f~I 126 (521)
+.++..+... . ++.|+. +|||+|++..+.++++. +.+..+|++.+.. ..+.+.+|+
T Consensus 8 ~~~~~~i~~~---~-vvvf~~g~~~~~~C~~C~~~~~~L~~~~-------------i~~~~vdi~~~~~~~~~l~~~~g~ 70 (105)
T 2yan_A 8 ERLKVLTNKA---S-VMLFMKGNKQEAKCGFSKQILEILNSTG-------------VEYETFDILEDEEVRQGLKAYSNW 70 (105)
T ss_dssp HHHHHHHTSS---S-EEEEESBCSSSBCTTHHHHHHHHHHHHT-------------CCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HHHHHHhccC---C-EEEEEecCCCCCCCccHHHHHHHHHHCC-------------CCeEEEECCCCHHHHHHHHHHHCC
Confidence 4556666543 2 444887 99999999999987752 3456677743211 235666899
Q ss_pred CcCceEEEecCCccc
Q 009987 127 GHYPMLLWGSPSKFV 141 (521)
Q Consensus 127 ~~yPTl~~f~~g~~~ 141 (521)
.++|++++ +|++.
T Consensus 71 ~~vP~v~i--~g~~i 83 (105)
T 2yan_A 71 PTYPQLYV--KGELV 83 (105)
T ss_dssp CSSCEEEE--TTEEE
T ss_pred CCCCeEEE--CCEEE
Confidence 99999854 45443
No 275
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.34 E-value=0.00019 Score=59.63 Aligned_cols=74 Identities=11% Similarity=0.004 Sum_probs=46.6
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc-ccccHHHH----HhCCCCcCceEEEecCCcccC
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA-LKINTNLC----DKFSVGHYPMLLWGSPSKFVA 142 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~-~d~~~~l~----~~f~I~~yPTl~~f~~g~~~~ 142 (521)
.++.|+++|||+|++..+.++++... +....||-. .++..++. +.+++.++|++++- +|
T Consensus 23 ~v~ly~~~~Cp~C~~ak~~L~~~~i~-----------y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~-~~---- 86 (103)
T 3nzn_A 23 KVIMYGLSTCVWCKKTKKLLTDLGVD-----------FDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIIN-DE---- 86 (103)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHTBC-----------EEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEET-TT----
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCC-----------cEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEEC-CC----
Confidence 37789999999999999998875322 333334321 11122332 34799999999871 11
Q ss_pred CCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 143 GSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 143 ~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
.+.|+.+.+.|.++|
T Consensus 87 -------------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 -------------KAIVGFKEKEIRESL 101 (103)
T ss_dssp -------------EEEESCCHHHHHHHT
T ss_pred -------------EEEEcCCHHHHHHHh
Confidence 134567777777665
No 276
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.26 E-value=0.00012 Score=61.81 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=43.3
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--cc----HHHHHhCCCCc
Q 009987 55 NFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--IN----TNLCDKFSVGH 128 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~----~~l~~~f~I~~ 128 (521)
.+++.+... + ++.|+++|||+|++..+.++++. +.+..+|.+.+ ++ ..+.+.+|+..
T Consensus 11 ~~~~~i~~~--~--v~vy~~~~Cp~C~~~~~~L~~~~-------------i~~~~~di~~~~~~~~~~~~~l~~~~g~~t 73 (113)
T 3rhb_A 11 SIRKTVTEN--T--VVIYSKTWCSYCTEVKTLFKRLG-------------VQPLVVELDQLGPQGPQLQKVLERLTGQHT 73 (113)
T ss_dssp HHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhcC--C--EEEEECCCChhHHHHHHHHHHcC-------------CCCeEEEeecCCCChHHHHHHHHHHhCCCC
Confidence 444555553 2 67799999999999999888642 22334554321 12 22555679999
Q ss_pred CceEEEecCCccc
Q 009987 129 YPMLLWGSPSKFV 141 (521)
Q Consensus 129 yPTl~~f~~g~~~ 141 (521)
+|++++ +|+..
T Consensus 74 vP~ifi--~g~~i 84 (113)
T 3rhb_A 74 VPNVFV--CGKHI 84 (113)
T ss_dssp SCEEEE--TTEEE
T ss_pred cCEEEE--CCEEE
Confidence 999954 45443
No 277
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.22 E-value=0.00039 Score=54.56 Aligned_cols=53 Identities=11% Similarity=0.206 Sum_probs=38.3
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCCCCcCceEEE
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVGHYPMLLW 134 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~I~~yPTl~~ 134 (521)
++.|+++||++|+...+.+++.. +.+..+|++.+ ...++.+.+++.++|++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~-------------i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~ 57 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG-------------VSFQELPIDGNAAKREEMIKRSGRTTVPQIFI 57 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT-------------CCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHCC-------------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 67899999999999998887641 23445565432 2234677899999999854
No 278
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=97.20 E-value=0.00043 Score=69.97 Aligned_cols=109 Identities=10% Similarity=0.022 Sum_probs=68.9
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc-----------
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL----------- 114 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~----------- 114 (521)
.+...+++.+. +++.+++++++.|| +.||+.|...++.|.+. +. ..+.++.|+.+.
T Consensus 8 ~l~~~~G~~~~--Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~~----~~------~~~~v~gis~D~~~~~~~f~~~~ 75 (322)
T 4eo3_A 8 ELLTDEGKTFT--HVDLYGKYTILFFFPKAGTSGSTREAVEFSRE----NF------EKAQVVGISRDSVEALKRFKEKN 75 (322)
T ss_dssp EEEETTSCEEE--GGGTTTSEEEEEECSSTTSHHHHHHHHHHHHS----CC------TTEEEEEEESCCHHHHHHHHHHH
T ss_pred EEECCCcCEEe--HHHhCCCeEEEEEECCCCCCCCHHHHHHHHHH----hh------CCCEEEEEeCCCHHHHHHHHHhh
Confidence 34455555443 55667789999999 67999999988877541 11 236777777642
Q ss_pred --------cccHHHHHhCCCC----cCceEEEe-cCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccC
Q 009987 115 --------KINTNLCDKFSVG----HYPMLLWG-SPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRS 177 (521)
Q Consensus 115 --------d~~~~l~~~f~I~----~yPTl~~f-~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~ 177 (521)
|.+..+++.|||. .+|+.+++ ++|++.. ......-...++++++++++.....
T Consensus 76 ~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~----------~~~~v~~~~h~~~~l~~~~~~~~~~ 141 (322)
T 4eo3_A 76 DLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRK----------EWRRVKVEGHVQEVKEALDRLIEED 141 (322)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSBEEE----------EEESCCSTTHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCEEEE----------EEeCCCccccHHHHHHHHhhhchhh
Confidence 4456788999984 46766655 5665431 1111223456788888887665433
No 279
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.10 E-value=0.00071 Score=62.92 Aligned_cols=30 Identities=27% Similarity=0.697 Sum_probs=26.6
Q ss_pred CeEEEEEecCCChhHhhhhHHH---HHHHHHhC
Q 009987 66 TYAVVEFFANWCPACRNYKPQY---EKVARLFN 95 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~---~~lA~~~~ 95 (521)
++.||+|+..|||||+++.|.+ .++.+.+.
T Consensus 22 ~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~ 54 (191)
T 3l9s_A 22 EPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP 54 (191)
T ss_dssp SSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC
T ss_pred CCeEEEEECCCChhHHHhChhccchHHHHHhCC
Confidence 5679999999999999999986 68888874
No 280
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=97.06 E-value=0.00098 Score=63.45 Aligned_cols=98 Identities=9% Similarity=0.159 Sum_probs=66.8
Q ss_pred HhcCCCCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccc------------------------
Q 009987 60 LRDTPATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCAL------------------------ 114 (521)
Q Consensus 60 l~~~~~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~------------------------ 114 (521)
+.+.+++++|+.|| +.||+.|......+.++..+|++. .+.++.|.++.
T Consensus 51 Lsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~------g~~vigiS~Ds~~sh~~w~~~~~~~~~~~~l~fpl 124 (219)
T 3tue_A 51 LSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNEL------NCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPI 124 (219)
T ss_dssp GGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTT------TEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCE
T ss_pred hHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccC------CcEEEEeeCCchhhHHHHhhhhHHhcCcccccccc
Confidence 44556789999999 999999999999999999999864 37777787643
Q ss_pred --cccHHHHHhCCCC----cCc---eEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 115 --KINTNLCDKFSVG----HYP---MLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 115 --d~~~~l~~~f~I~----~yP---Tl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
|.+.++++.|||- +++ |+++-++|++.. ..+....-+++.++++..|+.
T Consensus 125 lsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~Ir~---------~~~~~~~~gr~~~EvLr~l~a 182 (219)
T 3tue_A 125 LADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQ---------ITVNDMPVGRSVEEVLRLLEA 182 (219)
T ss_dssp EECTTSHHHHHTTCEETTTTEECEEEEEECTTSBEEE---------EEEECTTCCCCHHHHHHHHHH
T ss_pred ccCcccHHHHHcCCcccCCCeeEEEEEEECCCCeEEE---------EEEecCCCCCCHHHHHHHHHH
Confidence 2345678888872 343 344445554321 111122345788888877754
No 281
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.04 E-value=0.0012 Score=53.95 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=49.7
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc--HHHHHh-CCCCcCceEEEecCCcccCCCC
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN--TNLCDK-FSVGHYPMLLWGSPSKFVAGSW 145 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~--~~l~~~-f~I~~yPTl~~f~~g~~~~~~~ 145 (521)
++.|..+|||+|++....+++. .|.+-.+|.+.+.. ..+.+. .|.+.+|++++ .+|.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~-------------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~~----- 66 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN-------------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGST----- 66 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT-------------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSCE-----
T ss_pred EEEEcCCCCHhHHHHHHHHHhc-------------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCEE-----
Confidence 7889999999999988777652 14566677643211 122222 37889999876 33322
Q ss_pred CCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 146 EPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 146 ~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
-++.+.++|.++|.+..+
T Consensus 67 ------------l~~~~~~el~~~L~el~g 84 (92)
T 2lqo_A 67 ------------LTNPSADEVKAKLVKIAG 84 (92)
T ss_dssp ------------EESCCHHHHHHHHHHHHC
T ss_pred ------------EeCCCHHHHHHHHHHhcC
Confidence 123577888888887665
No 282
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.01 E-value=0.0033 Score=58.86 Aligned_cols=44 Identities=27% Similarity=0.488 Sum_probs=31.8
Q ss_pred CCCCeEEEEEecCCChhHhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEee
Q 009987 63 TPATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVD 111 (521)
Q Consensus 63 ~~~~~vlV~FyA~WCg~C~~~~P~~-~~lA~~~~~~~~~~~~~v~~~~VD 111 (521)
...++.||+|+...||+|+++.|.+ ..+.+.+-+. +.|.|...+
T Consensus 27 ~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~-----g~v~~~~~~ 71 (202)
T 3gha_A 27 DDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDK-----GDVKFSFVN 71 (202)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-----TSEEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccC-----CeEEEEEEe
Confidence 3357789999999999999999886 5666666321 456666444
No 283
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.01 E-value=0.0003 Score=61.34 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=45.4
Q ss_pred cccHHHHHhcCCCCeEEEEEecCCChhHhhh-hHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-----HHHHHhCCC
Q 009987 53 ATNFDAVLRDTPATYAVVEFFANWCPACRNY-KPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSV 126 (521)
Q Consensus 53 ~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~-~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~f~I 126 (521)
.+.+++.+... + ++.|+.+|||+|++. .+.++++... .+.+..+|++.+.+ ..+.+.+|+
T Consensus 27 ~~~v~~~i~~~--~--Vvvy~~~~Cp~C~~a~k~~L~~~~~~----------~i~~~~vdvd~~~~~~~~~~~L~~~~g~ 92 (129)
T 3ctg_A 27 VAHVKDLIGQK--E--VFVAAKTYCPYCKATLSTLFQELNVP----------KSKALVLELDEMSNGSEIQDALEEISGQ 92 (129)
T ss_dssp HHHHHHHHHHS--S--EEEEECTTCHHHHHHHHHHHTTSCCC----------GGGEEEEEGGGSTTHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCC--C--EEEEECCCCCchHHHHHHHHHhcCcc----------CCCcEEEEccccCCHHHHHHHHHHHhCC
Confidence 45666677654 2 688999999999998 7777654310 13344455533322 467888999
Q ss_pred CcCceEEE
Q 009987 127 GHYPMLLW 134 (521)
Q Consensus 127 ~~yPTl~~ 134 (521)
..+|++++
T Consensus 93 ~tVP~vfi 100 (129)
T 3ctg_A 93 KTVPNVYI 100 (129)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 99999754
No 284
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.99 E-value=0.00062 Score=54.88 Aligned_cols=53 Identities=13% Similarity=0.335 Sum_probs=37.9
Q ss_pred EEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhCCCCcCceEEE
Q 009987 69 VVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGHYPMLLW 134 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f~I~~yPTl~~ 134 (521)
++.|+++||++|++..+.+++.. +.+..+|++.+. ..++.+.+++.++|++++
T Consensus 8 v~ly~~~~C~~C~~~~~~L~~~~-------------i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~~ 62 (92)
T 2khp_A 8 VIIYTRPGCPYCARAKALLARKG-------------AEFNEIDASATPELRAEMQERSGRNTFPQIFI 62 (92)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEESTTSHHHHHHHHHHHTSSCCCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC-------------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE
Confidence 78899999999999988887631 334556664221 234666889999998743
No 285
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.96 E-value=0.00092 Score=56.66 Aligned_cols=69 Identities=13% Similarity=0.228 Sum_probs=45.7
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-----HHHHHhCCCCc
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~f~I~~ 128 (521)
+.+++.+... + ++.|+.+|||+|++..+.++++. +.+..+|.+...+ ..+.+..|...
T Consensus 8 ~~~~~~i~~~--~--v~vy~~~~Cp~C~~ak~~L~~~~-------------i~~~~~dvd~~~~~~~~~~~l~~~~g~~t 70 (114)
T 3h8q_A 8 RHLVGLIERS--R--VVIFSKSYCPHSTRVKELFSSLG-------------VECNVLELDQVDDGARVQEVLSEITNQKT 70 (114)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEETTTSTTHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhccC--C--EEEEEcCCCCcHHHHHHHHHHcC-------------CCcEEEEecCCCChHHHHHHHHHHhCCCc
Confidence 4566777654 2 56699999999999998887641 2234455532222 33557788999
Q ss_pred CceEEEecCCccc
Q 009987 129 YPMLLWGSPSKFV 141 (521)
Q Consensus 129 yPTl~~f~~g~~~ 141 (521)
+|++++ +|+..
T Consensus 71 vP~vfi--~g~~i 81 (114)
T 3h8q_A 71 VPNIFV--NKVHV 81 (114)
T ss_dssp SCEEEE--TTEEE
T ss_pred cCEEEE--CCEEE
Confidence 999976 45443
No 286
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.90 E-value=0.00088 Score=55.43 Aligned_cols=54 Identities=7% Similarity=0.120 Sum_probs=37.4
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhC-CCCcCceEEE
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKF-SVGHYPMLLW 134 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f-~I~~yPTl~~ 134 (521)
-++.|+++|||+|++..+.++++. +.+..+|++.+. ...+.+.. +..++|++++
T Consensus 17 ~v~vy~~~~Cp~C~~ak~~L~~~~-------------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 17 KIEIYTWSTCPFCMRALALLKRKG-------------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHHT-------------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CEEEEEcCCChhHHHHHHHHHHCC-------------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 478899999999999999988752 234456653321 12344445 9999999854
No 287
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.83 E-value=0.011 Score=52.57 Aligned_cols=114 Identities=11% Similarity=0.181 Sum_probs=78.0
Q ss_pred cCcceecCcccHHHHHhcCCCCeEEEE-EecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHh
Q 009987 45 VDHAVELNATNFDAVLRDTPATYAVVE-FFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDK 123 (521)
Q Consensus 45 ~~~v~~L~~~~f~~~l~~~~~~~vlV~-FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~ 123 (521)
-+.|.++|.++........ -++.+. |...-=..=..+.+.++++|+.++ +++.|+.+|.+.+.+..+...
T Consensus 13 ~PLV~e~t~en~~~~~~~~--~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fk-------gki~Fv~vd~~~~~~~~~l~~ 83 (147)
T 3bj5_A 13 LPLVIEFTEQTAPKIFGGE--IKTHILLFLPKSVSDYDGKLSNFKTAAESFK-------GKILFAFIDSDHTDNQRILEF 83 (147)
T ss_dssp --CEEECCTTTHHHHHSSS--CCEEEEEECCTTSSSHHHHHHHHHHHHHTTT-------TTCEEEEECTTCGGGHHHHHH
T ss_pred CCeeEEeccccHHHHhcCC--CceEEEEEecCCcHhHHHHHHHHHHHHHHcC-------CceEEEEEecchHhHHHHHHH
Confidence 4458899999987775443 333333 443233334567899999999997 568999999754567778999
Q ss_pred CCCCc--CceEEEecC-CcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 124 FSVGH--YPMLLWGSP-SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 124 f~I~~--yPTl~~f~~-g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
||+.. .|++.++.. +.. .....-.+..+.+.|.+|+.+.+...+
T Consensus 84 fGl~~~~~P~v~i~~~~~~~-----------~Ky~~~~~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 84 FGLKKEECPAVRLITLEEEM-----------TKYKPESEELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp TTCCGGGCSEEEEEECSSSC-----------EEECCSCCCCCHHHHHHHHHHHHTTCS
T ss_pred cCCCcccCCEEEEEeccccc-----------ccCCCCcccCCHHHHHHHHHHHHcCCc
Confidence 99996 899988753 210 011111367889999999999886643
No 288
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=96.63 E-value=0.011 Score=56.41 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=26.4
Q ss_pred CCCeEEEEEecCCChhHhhhhHHH-HHHHHHhC
Q 009987 64 PATYAVVEFFANWCPACRNYKPQY-EKVARLFN 95 (521)
Q Consensus 64 ~~~~vlV~FyA~WCg~C~~~~P~~-~~lA~~~~ 95 (521)
..++.||+|+...||+|+++.|.. .++.+.+-
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~ 70 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYI 70 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcc
Confidence 346789999999999999999964 77877773
No 289
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=96.51 E-value=0.0088 Score=61.44 Aligned_cols=111 Identities=11% Similarity=0.066 Sum_probs=77.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh-hHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP-ACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKF 124 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg-~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f 124 (521)
+.+.++|.+++...... +.+++|.|+.++|. .++.+...+.+++..++ +.+.|+.+|++ +...+++.|
T Consensus 219 p~v~elt~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~i~f~~id~~--~~~~~~~~~ 287 (382)
T 2r2j_A 219 PLVREITFENGEELTEE--GLPFLILFHMKEDTESLEIFQNEVARQLISEK-------GTINFLHADCD--KFRHPLLHI 287 (382)
T ss_dssp CSSEECCHHHHHHHHTT--CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGT-------TTSEEEEEETT--TTHHHHHHT
T ss_pred CceEecChhhHHHHhcC--CCcEEEEEecCCchHHHHHHHHHHHHHHHHhC-------CeeEEEEEchH--HhHHHHHHc
Confidence 35778888888876644 36678999999983 45556556666555554 46999999984 577889999
Q ss_pred CCC--cCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcccCc
Q 009987 125 SVG--HYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 125 ~I~--~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~~~ 178 (521)
|+. .+|.+.++..++.. ....+.+..+.+.|.+|+++.+...+
T Consensus 288 gl~~~~~P~i~i~~~~~~y-----------~~~~~~~~~~~~~i~~F~~d~~~Gkl 332 (382)
T 2r2j_A 288 QKTPADCPVIAIDSFRHMY-----------VFGDFKDVLIPGKLKQFVFDLHSGKL 332 (382)
T ss_dssp TCCGGGCSEEEEECSSCEE-----------ECCCSGGGGSTTHHHHHHHHHHHTTT
T ss_pred CCCccCCCEEEEEcchhcC-----------CCCccccccCHHHHHHHHHHHHCCCc
Confidence 998 68999887543210 01112345577899999999886554
No 290
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.50 E-value=0.004 Score=52.16 Aligned_cols=64 Identities=13% Similarity=0.162 Sum_probs=43.5
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhCC
Q 009987 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS 125 (521)
Q Consensus 53 ~~~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f~ 125 (521)
.+.+++.+... + +|.|+. +|||+|++..+.++++ . +.+..+|++.+. ...+.+..|
T Consensus 5 ~~~~~~~i~~~--~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~----~---------i~~~~vdi~~~~~~~~~l~~~~g 67 (109)
T 1wik_A 5 SSGLKVLTNKA--S--VMLFMKGNKQEAKCGFSKQILEILNST----G---------VEYETFDILEDEEVRQGLKTFSN 67 (109)
T ss_dssp CCCHHHHHTTS--S--EEEEESSTTTCCCSSTHHHHHHHHHHT----C---------SCEEEEESSSCHHHHHHHHHHHS
T ss_pred HHHHHHHhccC--C--EEEEEecCCCCCCCchHHHHHHHHHHc----C---------CCeEEEECCCCHHHHHHHHHHhC
Confidence 35677777653 3 456777 9999999998888753 1 456677774321 124556678
Q ss_pred CCcCceEE
Q 009987 126 VGHYPMLL 133 (521)
Q Consensus 126 I~~yPTl~ 133 (521)
...+|+++
T Consensus 68 ~~~vP~if 75 (109)
T 1wik_A 68 WPTYPQLY 75 (109)
T ss_dssp CCSSCEEE
T ss_pred CCCCCEEE
Confidence 99999864
No 291
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=96.31 E-value=0.0072 Score=55.46 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=45.1
Q ss_pred cHHHHHhcCCCCeEEEEEecCCChhHhh-hhHHHHHHHHHhCCCCCCCCCeE-EEEEeeccc-cccHHHHHhCCCC-cCc
Q 009987 55 NFDAVLRDTPATYAVVEFFANWCPACRN-YKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVG-HYP 130 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA~WCg~C~~-~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~~-d~~~~l~~~f~I~-~yP 130 (521)
++.+.+.. +..+|+.|++.|||.|.. .+|.|.+.++++++.+ + .++.|.++. ......+++.++. .||
T Consensus 40 sLsd~~~G--k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g------~d~VigIS~D~~~~~~~f~~~~~l~~~f~ 111 (176)
T 4f82_A 40 SVRDQVAG--KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAG------IDEIWCVSVNDAFVMGAWGRDLHTAGKVR 111 (176)
T ss_dssp EHHHHHTT--CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTT------CCEEEEEESSCHHHHHHHHHHTTCTTTSE
T ss_pred eHHHHhCC--CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCC------CCEEEEEeCCCHHHHHHHHHHhCCCCCce
Confidence 44444443 134566777999999999 9999999999997533 4 555555432 2345566777765 344
Q ss_pred e
Q 009987 131 M 131 (521)
Q Consensus 131 T 131 (521)
.
T Consensus 112 l 112 (176)
T 4f82_A 112 M 112 (176)
T ss_dssp E
T ss_pred E
Confidence 3
No 292
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.20 E-value=0.0021 Score=59.26 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=27.5
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHh
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLF 94 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~ 94 (521)
+++||+|++.|||||+++.|.++++.+.+
T Consensus 23 ~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 23 MAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 67899999999999999999999999987
No 293
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=95.70 E-value=0.034 Score=50.65 Aligned_cols=31 Identities=19% Similarity=0.369 Sum_probs=26.0
Q ss_pred CCeEEEEEecCCChhHhhhhHHH-HHHHHHhC
Q 009987 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFN 95 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~-~~lA~~~~ 95 (521)
.++.|++|+..-||+|..+.+.+ .++.+.+.
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~ 42 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYI 42 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhc
Confidence 46689999999999999999998 56777663
No 294
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=95.10 E-value=0.017 Score=50.04 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=42.6
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--c-cHHHHHhCCCCcCc
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--I-NTNLCDKFSVGHYP 130 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~-~~~l~~~f~I~~yP 130 (521)
++|++++... . +|.|..+|||+|++....+++.. .+. ..+.++.||...+ + ...+.+..|.+.+|
T Consensus 5 ~~~~~ii~~~---~-Vvvysk~~Cp~C~~ak~lL~~~~-~~~-------v~~~~idid~~~d~~~~~~~l~~~~G~~tVP 72 (127)
T 3l4n_A 5 KEYSLILDLS---P-IIIFSKSTCSYSKGMKELLENEY-QFI-------PNYYIIELDKHGHGEELQEYIKLVTGRGTVP 72 (127)
T ss_dssp HHHHHHHTSC---S-EEEEECTTCHHHHHHHHHHHHHE-EEE-------SCCEEEEGGGSTTHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHccC---C-EEEEEcCCCccHHHHHHHHHHhc-ccC-------CCcEEEEecCCCCHHHHHHHHHHHcCCCCcc
Confidence 4677777664 2 78899999999999988777631 011 1133444443211 1 12234446889999
Q ss_pred eEEE
Q 009987 131 MLLW 134 (521)
Q Consensus 131 Tl~~ 134 (521)
++++
T Consensus 73 ~IfI 76 (127)
T 3l4n_A 73 NLLV 76 (127)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 9976
No 295
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=95.06 E-value=0.063 Score=51.58 Aligned_cols=110 Identities=11% Similarity=0.174 Sum_probs=74.9
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCCh---hH-hhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCP---AC-RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC 121 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg---~C-~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~ 121 (521)
+.|.++|.+++... .+ .+++|.|+..-+. .+ ..+...+.++|+.+++.+ ..+.|+.+|+. ....+.
T Consensus 114 Plv~e~t~~n~~~~-~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~----~~~~F~~~d~~--~~~~~~ 183 (252)
T 2h8l_A 114 GICPHMTEDNKDLI-QG---KDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG----HKLNFAVASRK--TFSHEL 183 (252)
T ss_dssp CSSCEECTTTHHHH-SS---SSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTT----CCCEEEEEETT--TTHHHH
T ss_pred CCeeecccccHhhh-cC---CCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccC----ceEEEEEEchH--HHHHHH
Confidence 45788888888775 32 3456777754331 12 247788899999997421 24899999984 567789
Q ss_pred HhCCC----CcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHH--HHHHHHHhcccCc
Q 009987 122 DKFSV----GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADG--LLTWINKQTSRSY 178 (521)
Q Consensus 122 ~~f~I----~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~--L~~~i~~~l~~~~ 178 (521)
+.||+ ..+|.+.++... + . ...+.+..+.+. |.+|+++.+...+
T Consensus 184 ~~fgl~~~~~~~P~v~i~~~~----~--------~-ky~~~~~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 184 SDFGLESTAGEIPVVAIRTAK----G--------E-KFVMQEEFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp GGGTCCCCSCSSCEEEEECTT----S--------C-EEECCSCCCTTSHHHHHHHHHHHHTCS
T ss_pred HHcCCCCccCCCCEEEEEeCc----C--------c-EecCCcccCcchHHHHHHHHHHHCCCc
Confidence 99999 369999987421 0 0 112345677788 9999999886543
No 296
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=94.27 E-value=0.16 Score=49.56 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=54.4
Q ss_pred eEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeE--EEEEee-cc-------------ccccHHHHHhCCCCcC-
Q 009987 67 YAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGII--LMTRVD-CA-------------LKINTNLCDKFSVGHY- 129 (521)
Q Consensus 67 ~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v--~~~~VD-c~-------------~d~~~~l~~~f~I~~y- 129 (521)
..+..|+.++|++|......+++++..+. .+ .+- +| .+ .+....+.+++|++++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~--------vi~l~~~-v~~~dylgw~D~~a~~~~~~r~~~~~~~~G~~tVy 114 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD--------VVGLSYH-VDYWNYLGWTDSLASKENTERQYGYMRALGRNGVY 114 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS--------SEEEEEE-CSTTCSSSSCCTTCCHHHHHHHHHHHHHTTCSCCC
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC--------eeeEEEE-EEEecccccccchhhhhhhHHHHHHHHHhCCCccc
Confidence 46777999999999999999999987753 22 222 22 11 1233457889999988
Q ss_pred -ceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 130 -PMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 130 -PTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
|.+++ +|+ ...++.+.+.|.+.|.+..
T Consensus 115 TPqI~I--ng~----------------~~v~G~d~~~l~~~l~~~~ 142 (270)
T 2axo_A 115 TPQAIL--NGR----------------DHVKGADVRGIYDRLDAFK 142 (270)
T ss_dssp SSEEEE--TTT----------------EEEETTCHHHHHHHHHHHH
T ss_pred CCEEEE--CCE----------------EeecCCCHHHHHHHHHHhh
Confidence 99887 221 1124456788888887654
No 297
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=94.06 E-value=0.24 Score=47.01 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=52.2
Q ss_pred cceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCC
Q 009987 47 HAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSV 126 (521)
Q Consensus 47 ~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I 126 (521)
++...+.++++..+.....+++.+.|...-|. ...+++.++... ..+.+..++ +.+.+++++|||
T Consensus 139 ~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~~-------~~~~~~~d~~~~-----~~i~v~~~~---~~~~~l~~~f~v 203 (244)
T 3q6o_A 139 PLEPAXLEEIDGFFARNNEEYLALIFEXGGSY-------LAREVALDLSQH-----KGVAVRRVL---NTEANVVRKFGV 203 (244)
T ss_dssp CCSCCCHHHHHTHHHHCCCSEEEEEEECTTCC-------HHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHTC
T ss_pred CcccccHHHHHHHhhcCCCceEEEEEEECCcc-------hHHHHHHHhccC-----CceEEEEEe---CchHHHHHHcCC
Confidence 34455667787777666567777777776543 345556666543 247776666 446899999999
Q ss_pred CcCceEEEecC
Q 009987 127 GHYPMLLWGSP 137 (521)
Q Consensus 127 ~~yPTl~~f~~ 137 (521)
+++||+++|.+
T Consensus 204 ~~~Pslvl~~~ 214 (244)
T 3q6o_A 204 TDFPSCYLLFR 214 (244)
T ss_dssp CCSSEEEEEET
T ss_pred CCCCeEEEEeC
Confidence 99999987753
No 298
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=93.26 E-value=0.19 Score=49.67 Aligned_cols=104 Identities=13% Similarity=0.172 Sum_probs=67.8
Q ss_pred cCcceec-CcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHH--
Q 009987 45 VDHAVEL-NATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLC-- 121 (521)
Q Consensus 45 ~~~v~~L-~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~-- 121 (521)
.+.+..+ +.++++..+... +.+++|.| .. .....+.|+++|..+. +.+.|+.++-. +...+.
T Consensus 142 ~~~v~~i~~~~~l~~~l~~~-~~~~vi~f-s~----~~~~~~~f~~~A~~~~-------~~~~F~~v~~~--~~a~~~~~ 206 (298)
T 3ed3_A 142 RSYVKKFVRIDTLGSLLRKS-PKLSVVLF-SK----QDKISPVYKSIALDWL-------GKFDFYSISNK--KLKQLTDM 206 (298)
T ss_dssp CCCEEECSCGGGHHHHHTSC-SSEEEEEE-ES----SSSCCHHHHHHHHHTB-------TTEEEEEEEGG--GCCCCCTT
T ss_pred ccccEEcCCHHHHHHHHhcC-CceEEEEE-cC----CCcchHHHHHHHHHhh-------cCcEEEEEcch--Hhhhhhhh
Confidence 3446666 457788888765 46666666 32 2345689999999997 45899998842 111111
Q ss_pred HhCC-----C-------------CcCceEEEecCCcccCCCCCCCccchhhhhccc-cCCHHHHHHHHHHhcc
Q 009987 122 DKFS-----V-------------GHYPMLLWGSPSKFVAGSWEPNQEKKEIRALED-WQTADGLLTWINKQTS 175 (521)
Q Consensus 122 ~~f~-----I-------------~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G-~~~~~~L~~~i~~~l~ 175 (521)
.+|+ | ...|+|++|++.. .....|.| ..+.++|.+||.+...
T Consensus 207 ~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~------------~~~~~y~g~~~~~~~i~~fi~~~~~ 267 (298)
T 3ed3_A 207 NPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADK------------DKFWEYEGNSINKNDISKFLRDTFS 267 (298)
T ss_dssp CTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTT------------TEEEECCCSSCCHHHHHHHHHHHHT
T ss_pred hhhcccCcchhhhhhcccccccccCCCeEEEEcCCC------------CceEEeccccCCHHHHHHHHHhhcC
Confidence 2222 2 6799999997521 23345664 6899999999997654
No 299
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=93.22 E-value=0.13 Score=50.19 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=25.0
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHH
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARL 93 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~ 93 (521)
++.+++.|+-+.||+|+++.+.+++..++
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 46789999999999999999999865554
No 300
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=92.74 E-value=0.056 Score=47.19 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=39.9
Q ss_pred ccHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCCC
Q 009987 54 TNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSV 126 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~I 126 (521)
+.+++.+... + ++| |+. +|||+|++....++++ . +.+..+|.+.+ ....+.+..|.
T Consensus 26 ~~v~~~i~~~--~-Vvv-y~ks~~~~~~Cp~C~~ak~~L~~~----g---------v~y~~vdI~~d~~~~~~L~~~~G~ 88 (135)
T 2wci_A 26 EKIQRQIAEN--P-ILL-YMKGSPKLPSCGFSAQAVQALAAC----G---------ERFAYVDILQNPDIRAELPKYANW 88 (135)
T ss_dssp HHHHHHHHHC--S-EEE-EESBCSSSBSSHHHHHHHHHHHTT----C---------SCCEEEEGGGCHHHHHHHHHHHTC
T ss_pred HHHHHHhccC--C-EEE-EEEecCCCCCCccHHHHHHHHHHc----C---------CceEEEECCCCHHHHHHHHHHHCC
Confidence 4455666653 2 444 555 8999999988877653 1 34556676432 11234445688
Q ss_pred CcCceEEE
Q 009987 127 GHYPMLLW 134 (521)
Q Consensus 127 ~~yPTl~~ 134 (521)
..+|.+++
T Consensus 89 ~tvP~VfI 96 (135)
T 2wci_A 89 PTFPQLWV 96 (135)
T ss_dssp CSSCEEEE
T ss_pred CCcCEEEE
Confidence 89999865
No 301
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.56 E-value=0.063 Score=42.55 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=35.5
Q ss_pred EEEEecC----CChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecc-----cc--ccHHHHHhCCCC-----cCceE
Q 009987 69 VVEFFAN----WCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCA-----LK--INTNLCDKFSVG-----HYPML 132 (521)
Q Consensus 69 lV~FyA~----WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~-----~d--~~~~l~~~f~I~-----~yPTl 132 (521)
++.|+.+ |||+|++....+++. . +.+-.+|.+ .+ ...++.+..|.. .+|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v 68 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK----K---------QPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQV 68 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT----T---------CCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc----C---------CCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEE
Confidence 5678899 999999988777652 1 334455553 21 123466677888 89998
Q ss_pred EE
Q 009987 133 LW 134 (521)
Q Consensus 133 ~~ 134 (521)
++
T Consensus 69 ~i 70 (87)
T 1aba_A 69 FA 70 (87)
T ss_dssp EC
T ss_pred EE
Confidence 64
No 302
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=92.43 E-value=0.21 Score=53.50 Aligned_cols=77 Identities=16% Similarity=0.138 Sum_probs=56.8
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCC
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFS 125 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~ 125 (521)
+++..++.++++..+.....++++|.|...- .+...+++.++... ..|.+..++ +.+.+++++||
T Consensus 138 p~l~~it~~~l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~-----~~v~v~~v~---~~~~~l~~kfg 202 (519)
T 3t58_A 138 PPLEPAKLNDIDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQY-----HAVAVRRVL---NTESDLVNKFG 202 (519)
T ss_dssp CCCSBCCHHHHTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTC-----TTEEEEEEE---TTCHHHHHHHT
T ss_pred CccCcCCHHHHHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhcc-----CCeeEEEec---CchHHHHHHcC
Confidence 3456667788887777766778888888653 34667777787643 347776665 45689999999
Q ss_pred CCcCceEEEecC
Q 009987 126 VGHYPMLLWGSP 137 (521)
Q Consensus 126 I~~yPTl~~f~~ 137 (521)
|+.+||+++|.+
T Consensus 203 V~~~Pslvl~~~ 214 (519)
T 3t58_A 203 VTDFPSCYLLLR 214 (519)
T ss_dssp CCCSSEEEEEET
T ss_pred CCCCCeEEEEeC
Confidence 999999999864
No 303
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=92.21 E-value=0.14 Score=46.45 Aligned_cols=41 Identities=22% Similarity=0.443 Sum_probs=32.2
Q ss_pred CCeEEEEEecCCChhHhhhhHHH-HHHHHHhCCCCCCCCCeEEEEEeec
Q 009987 65 ATYAVVEFFANWCPACRNYKPQY-EKVARLFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~-~~lA~~~~~~~~~~~~~v~~~~VDc 112 (521)
.++++|+||..+||+|..+.+.+ .++.+.+. +.|.+..+..
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~-------~~v~~~~~~l 58 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVK-------DIVAFTPFHL 58 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTT-------TTCEEEEEEC
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCC-------CceEEEEEec
Confidence 35679999999999999999999 99988774 2355555553
No 304
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=92.18 E-value=0.29 Score=44.80 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=41.9
Q ss_pred CCeEEEEEe-cCCChhHh-hhhHHHHHHHHHh-CCCCCCCCCeE-EEEEeeccc-cccHHHHHhCCCCcCce
Q 009987 65 ATYAVVEFF-ANWCPACR-NYKPQYEKVARLF-NGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVGHYPM 131 (521)
Q Consensus 65 ~~~vlV~Fy-A~WCg~C~-~~~P~~~~lA~~~-~~~~~~~~~~v-~~~~VDc~~-d~~~~l~~~f~I~~yPT 131 (521)
++++++.|| +.|||.|. ...+.|.+.+.++ +..+ + .++.|.++. ......++++++..||.
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g------~~~V~gvS~D~~~~~~~~~~~~~~~~f~l 108 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENN------FDDIYCITNNDIYVLKSWFKSMDIKKIKY 108 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSC------CSEEEEEESSCHHHHHHHHHHTTCCSSEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCC------CcEEEEEeCCCHHHHHHHHHHcCCCCceE
Confidence 466677676 68999999 8999999999999 7543 3 255555432 23456777888754543
No 305
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.04 E-value=0.12 Score=43.20 Aligned_cols=62 Identities=18% Similarity=0.162 Sum_probs=39.3
Q ss_pred HHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhCCCCc
Q 009987 56 FDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFSVGH 128 (521)
Q Consensus 56 f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f~I~~ 128 (521)
.++.+.+. + +|.|.. +|||+|++....+++. . +.+..+|.+.+. ...+.+..|...
T Consensus 9 v~~~i~~~---~-Vvlf~kg~~~~~~Cp~C~~ak~~L~~~----g---------i~y~~~di~~d~~~~~~l~~~~g~~t 71 (111)
T 3zyw_A 9 LKKLTHAA---P-CMLFMKGTPQEPRCGFSKQMVEILHKH----N---------IQFSSFDIFSDEEVRQGLKAYSSWPT 71 (111)
T ss_dssp HHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHT----T---------CCCEEEEGGGCHHHHHHHHHHHTCCS
T ss_pred HHHHHhcC---C-EEEEEecCCCCCcchhHHHHHHHHHHc----C---------CCeEEEECcCCHHHHHHHHHHHCCCC
Confidence 44555553 2 677888 9999999988777653 1 334556664321 122333447889
Q ss_pred CceEEE
Q 009987 129 YPMLLW 134 (521)
Q Consensus 129 yPTl~~ 134 (521)
+|.+++
T Consensus 72 vP~ifi 77 (111)
T 3zyw_A 72 YPQLYV 77 (111)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 999876
No 306
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.98 E-value=0.21 Score=42.54 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=39.2
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCCCC
Q 009987 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVG 127 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~I~ 127 (521)
-+++.+... + +|.|.. ||||+|++....+++..-.+ .. +..+|...+ ....+.+..|..
T Consensus 8 ~v~~~i~~~--~--Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~--------~~--~~~~dv~~~~~~~~~l~~~sg~~ 73 (121)
T 3gx8_A 8 AIEDAIESA--P--VVLFMKGTPEFPKCGFSRATIGLLGNQGVDP--------AK--FAAYNVLEDPELREGIKEFSEWP 73 (121)
T ss_dssp HHHHHHHSC--S--EEEEESBCSSSBCTTHHHHHHHHHHHHTBCG--------GG--EEEEECTTCHHHHHHHHHHHTCC
T ss_pred HHHHHhccC--C--EEEEEeccCCCCCCccHHHHHHHHHHcCCCc--------ce--EEEEEecCCHHHHHHHHHHhCCC
Confidence 345566654 2 556666 49999999988887652111 11 444554322 223344556888
Q ss_pred cCceEEE
Q 009987 128 HYPMLLW 134 (521)
Q Consensus 128 ~yPTl~~ 134 (521)
.+|.+++
T Consensus 74 tvP~vfI 80 (121)
T 3gx8_A 74 TIPQLYV 80 (121)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 9999866
No 307
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=91.69 E-value=0.17 Score=48.07 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=39.2
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-HHHHHhCCCCcCceEEE
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-TNLCDKFSVGHYPMLLW 134 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-~~l~~~f~I~~yPTl~~ 134 (521)
.++.|..+||+.|++....+++.. +.+-.+|++.+.. .++.+.+|..++|++++
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~~-------------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDKG-------------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT-------------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-------------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 478899999999999988877531 2334455543322 56778899999999865
No 308
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.10 E-value=0.33 Score=40.49 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=33.9
Q ss_pred EEEEecCCChhHh------hhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc-c-HHHHHhC--------CCCcCceE
Q 009987 69 VVEFFANWCPACR------NYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI-N-TNLCDKF--------SVGHYPML 132 (521)
Q Consensus 69 lV~FyA~WCg~C~------~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~-~-~~l~~~f--------~I~~yPTl 132 (521)
++.|+.++|+.|+ +....+++ . .|.+..+|.+.+. . ..+...+ |...+|.+
T Consensus 10 V~vy~~~~C~~C~~~~~~~~ak~~L~~----~---------gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~v 76 (111)
T 2ct6_A 10 IRVFIASSSGFVAIKKKQQDVVRFLEA----N---------KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQI 76 (111)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEE
T ss_pred EEEEEcCCCCCcccchhHHHHHHHHHH----c---------CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEE
Confidence 6788999999999 45444442 2 1556677775321 1 2344454 77889988
Q ss_pred EE
Q 009987 133 LW 134 (521)
Q Consensus 133 ~~ 134 (521)
++
T Consensus 77 fi 78 (111)
T 2ct6_A 77 FN 78 (111)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 309
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=90.96 E-value=1.2 Score=42.37 Aligned_cols=107 Identities=13% Similarity=0.088 Sum_probs=71.8
Q ss_pred CcceecCcccHHHHHhcCCCCeEEEEEec-CCC---hh-HhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHH
Q 009987 46 DHAVELNATNFDAVLRDTPATYAVVEFFA-NWC---PA-CRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNL 120 (521)
Q Consensus 46 ~~v~~L~~~~f~~~l~~~~~~~vlV~FyA-~WC---g~-C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l 120 (521)
+.|.++|.+|+.... . +++.++.|+. +.. .. ...+...++++|++++ .+.|+.+|+ ++....
T Consensus 116 Plv~e~t~~n~~~~~-~--~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k--------ki~F~~~d~--~~~~~~ 182 (250)
T 3ec3_A 116 PLVGHRKTSNDAKRY-S--KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP--------EYTFAIADE--EDYATE 182 (250)
T ss_dssp CTEEEECTTTHHHHS-C--SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT--------TSEEEEEET--TTTHHH
T ss_pred CceeecCccchhhhh-c--cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc--------ceeEEEEcH--HHHHHH
Confidence 457788888887765 2 3566666665 333 33 3457888999999875 278889997 456778
Q ss_pred HHhCCCCc--Cc-eEEEecCCcccCCCCCCCccchhhhhcc-ccCCHHHHHHHHHHhcccCc
Q 009987 121 CDKFSVGH--YP-MLLWGSPSKFVAGSWEPNQEKKEIRALE-DWQTADGLLTWINKQTSRSY 178 (521)
Q Consensus 121 ~~~f~I~~--yP-Tl~~f~~g~~~~~~~~~~~~~~~v~~~~-G~~~~~~L~~~i~~~l~~~~ 178 (521)
.+.||+.. +| .+.++... + .. ..+. +..+.+.|.+|++..+..++
T Consensus 183 l~~fgl~~~~~~p~~~~~~~~----~--------~k-y~~~~~~~t~~~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 183 VKDLGLSESGGDVNAAILDES----G--------KK-FAMEPEEFDSDALREFVMAFKKGKL 231 (250)
T ss_dssp HHHTTCSSCSCSCEEEEECTT----S--------CE-EECCCCSCCHHHHHHHHHHHHTTCC
T ss_pred HHHcCCCccCCCcEEEEEcCC----C--------ce-ecCCcccCCHHHHHHHHHHHHCCCc
Confidence 88999974 55 66554321 0 00 1122 56799999999999886654
No 310
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=90.63 E-value=0.21 Score=41.54 Aligned_cols=63 Identities=13% Similarity=0.216 Sum_probs=38.5
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCCCC
Q 009987 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFSVG 127 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~I~ 127 (521)
.+++.+... . +|.|.. ||||+|++....+++.. +.+..+|.+.+ ....+.+..|..
T Consensus 10 ~v~~~i~~~---~-Vvvy~k~t~~~p~Cp~C~~ak~~L~~~g-------------i~~~~~dI~~~~~~~~~l~~~~g~~ 72 (109)
T 3ipz_A 10 TLEKLVNSE---K-VVLFMKGTRDFPMCGFSNTVVQILKNLN-------------VPFEDVNILENEMLRQGLKEYSNWP 72 (109)
T ss_dssp HHHHHHTSS---S-EEEEESBCSSSBSSHHHHHHHHHHHHTT-------------CCCEEEEGGGCHHHHHHHHHHHTCS
T ss_pred HHHHHHccC---C-EEEEEecCCCCCCChhHHHHHHHHHHcC-------------CCcEEEECCCCHHHHHHHHHHHCCC
Confidence 344555553 2 455666 49999999887777631 33455665322 123344455889
Q ss_pred cCceEEE
Q 009987 128 HYPMLLW 134 (521)
Q Consensus 128 ~yPTl~~ 134 (521)
.+|++++
T Consensus 73 tvP~ifi 79 (109)
T 3ipz_A 73 TFPQLYI 79 (109)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 9998865
No 311
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=89.42 E-value=0.22 Score=39.93 Aligned_cols=53 Identities=8% Similarity=-0.037 Sum_probs=34.9
Q ss_pred EEEEecCCChhH------hhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccc--cHHHHHhCC--CCcCceEEE
Q 009987 69 VVEFFANWCPAC------RNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKI--NTNLCDKFS--VGHYPMLLW 134 (521)
Q Consensus 69 lV~FyA~WCg~C------~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~--~~~l~~~f~--I~~yPTl~~ 134 (521)
++.|+.+|||.| ++....+++ . .|.+..+|.+.+. -..+.+..| ...+|.+++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~----~---------~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~ifi 66 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG----K---------RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIVN 66 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH----T---------TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEEE
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH----C---------CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEEE
Confidence 677999999999 565554443 2 1456667764321 134556778 779999866
No 312
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=88.99 E-value=0.31 Score=41.29 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=38.1
Q ss_pred cHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEE-EEEeecccc-c-cHHHHHhCCC
Q 009987 55 NFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIIL-MTRVDCALK-I-NTNLCDKFSV 126 (521)
Q Consensus 55 ~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~-~~~VDc~~d-~-~~~l~~~f~I 126 (521)
..++.+.+. . +|.|.. ||||+|++....++++. +. +..+|++.+ + ...+.+..|.
T Consensus 12 ~v~~~i~~~---~-Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g-------------v~~~~~vdV~~d~~~~~~l~~~tg~ 74 (118)
T 2wem_A 12 QLDALVKKD---K-VVVFLKGTPEQPQCGFSNAVVQILRLHG-------------VRDYAAYNVLDDPELRQGIKDYSNW 74 (118)
T ss_dssp HHHHHHHHS---S-EEEEESBCSSSBSSHHHHHHHHHHHHTT-------------CCCCEEEESSSCHHHHHHHHHHHTC
T ss_pred HHHHHhccC---C-EEEEEecCCCCCccHHHHHHHHHHHHcC-------------CCCCEEEEcCCCHHHHHHHHHHhCC
Confidence 345566664 2 566776 49999999887776531 21 344554322 1 1233444488
Q ss_pred CcCceEEE
Q 009987 127 GHYPMLLW 134 (521)
Q Consensus 127 ~~yPTl~~ 134 (521)
..+|++++
T Consensus 75 ~tvP~vfI 82 (118)
T 2wem_A 75 PTIPQVYL 82 (118)
T ss_dssp CSSCEEEE
T ss_pred CCcCeEEE
Confidence 89999866
No 313
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=87.28 E-value=0.33 Score=33.58 Aligned_cols=28 Identities=29% Similarity=0.208 Sum_probs=14.7
Q ss_pred HHHHHHHHHhhhhhHHHHHHH-HHHhhhh
Q 009987 483 GAALAIALASCAFGALACYWR-SQQKNRK 510 (521)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 510 (521)
+++++|+++-.+-+.+++|+| .+|++||
T Consensus 16 ~~vVGvll~vi~~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 16 SAVVGILLVVVLGVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCCC
T ss_pred HHHHHHHHHHHHHHHHHhheehhhhhccC
Confidence 555555554444445566664 4455544
No 314
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=87.08 E-value=0.48 Score=42.89 Aligned_cols=57 Identities=9% Similarity=0.110 Sum_probs=40.8
Q ss_pred CCeEEEEEe-cCCChhHhhhhHHHHHHHHHhCCCCCCCCCeE-EEEEeeccc-cccHHHHHhCCCC
Q 009987 65 ATYAVVEFF-ANWCPACRNYKPQYEKVARLFNGPNAAHPGII-LMTRVDCAL-KINTNLCDKFSVG 127 (521)
Q Consensus 65 ~~~vlV~Fy-A~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v-~~~~VDc~~-d~~~~l~~~f~I~ 127 (521)
++++++.|| ..|||.|....+.|.+.+.++++.+ + .++.|.++. ......++++++.
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~g------v~~VigIS~D~~~~~~~w~~~~~~~ 101 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEG------YHTIACIAVNDPFVMAAWGKTVDPE 101 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTT------CCEEEEEESSCHHHHHHHHHHHCTT
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCC------CCEEEEEeCCCHHHHHHHHHhcCCC
Confidence 466777777 5799999999999999999987533 4 365666532 2344678888873
No 315
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=83.29 E-value=1.5 Score=39.81 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=32.1
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEee
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVD 111 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VD 111 (521)
..++||+|...-||+|+++.|.+.++.+++. +++|.++--+
T Consensus 14 a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~------~g~v~~v~r~ 54 (182)
T 3gn3_A 14 GPRLFEVFLEPTCPFSVKAFFKLDDLLAQAG------EDNVTVRIRL 54 (182)
T ss_dssp CSEEEEEEECTTCHHHHHHHTTHHHHHHHHC------TTTEEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHhC------CCCEEEEEEE
Confidence 3678999999999999999999988776652 1457776655
No 316
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=81.29 E-value=2.4 Score=39.22 Aligned_cols=43 Identities=23% Similarity=0.397 Sum_probs=32.0
Q ss_pred CCeEEEEEecCCChhHhhhhHHHHHHHH-HhCCCCCCCCCeEEEEEeec
Q 009987 65 ATYAVVEFFANWCPACRNYKPQYEKVAR-LFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 65 ~~~vlV~FyA~WCg~C~~~~P~~~~lA~-~~~~~~~~~~~~v~~~~VDc 112 (521)
.+++||+|...-||+|+++.+.+...-+ .+-+. ++|.++-.+.
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~-----g~v~~v~r~~ 58 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQP-----GKGAIEVRNF 58 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTT-----TSEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccC-----CeEEEEEEeC
Confidence 4678999999999999999998865544 66321 5677776554
No 317
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=81.16 E-value=1.1 Score=45.56 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=39.1
Q ss_pred HHHHHhcCCCCeEEEEEecCCChhHhhhhH-HHHHHHHHhCCCCCCCCCeEEEEEeeccc---cccHHHHHhCCCCcCce
Q 009987 56 FDAVLRDTPATYAVVEFFANWCPACRNYKP-QYEKVARLFNGPNAAHPGIILMTRVDCAL---KINTNLCDKFSVGHYPM 131 (521)
Q Consensus 56 f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P-~~~~lA~~~~~~~~~~~~~v~~~~VDc~~---d~~~~l~~~f~I~~yPT 131 (521)
.++.+... . ++.|..+|||+|++... .++++.-.+ ..+.++.+|-.. +....+.+..|.+.+|+
T Consensus 254 V~~lI~~~---~-VvVYsk~~CPyC~~Ak~~LL~~~gV~y--------~eidVlEld~~~~~~e~~~~L~~~tG~~TVPq 321 (362)
T 2jad_A 254 VKDLIAEN---E-IFVASKTYCPYSHAALNTLFEKLKVPR--------SKVLVLQLNDMKEGADIQAALYEINGQRTVPN 321 (362)
T ss_dssp HHHHHHTC---S-EEEEECTTCHHHHHHHHHHHTTTCCCT--------TTEEEEEGGGSTTHHHHHHHHHHHHCCCSSCE
T ss_pred HHHHhccC---C-EEEEEcCCCcchHHHHHHHHHHcCCCc--------ceEEEEEeccccCCHHHHHHHHHHHCCCCcCE
Confidence 44455553 2 67899999999998654 344322111 235555544211 11234556679999999
Q ss_pred EEE
Q 009987 132 LLW 134 (521)
Q Consensus 132 l~~ 134 (521)
+++
T Consensus 322 VFI 324 (362)
T 2jad_A 322 IYI 324 (362)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 318
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=80.57 E-value=1.4 Score=40.56 Aligned_cols=47 Identities=9% Similarity=0.159 Sum_probs=35.6
Q ss_pred ccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 116 ~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
.+...++++||.++||++++.+|+.. ..+.|..+.+.|.+.|++.+.
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~~-------------~~~~G~~~~~~l~~~l~~~~~ 210 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDRY-------------LITTGYRPIEALRQLLDTWLQ 210 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEEE-------------EEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEEE-------------EeccCCCCHHHHHHHHHHHHH
Confidence 34567889999999999987776421 235677889999999887654
No 319
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=75.53 E-value=3.8 Score=34.80 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=34.4
Q ss_pred EEEEEecCCChhHhhhhH--HHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhC--------CCCcCceEEE
Q 009987 68 AVVEFFANWCPACRNYKP--QYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKF--------SVGHYPMLLW 134 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P--~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f--------~I~~yPTl~~ 134 (521)
+++.|+++.||.|+-..- ..+.+-+. ..|.|-.+|++.+ .-.++.++. |.+.+|.|++
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~---------kgV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIFi 70 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA---------NKIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIFN 70 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH---------TTCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEEE
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH---------CCCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEEE
Confidence 367888999999942211 11222222 1367777887532 223455677 7888898876
No 320
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=71.65 E-value=4.2 Score=43.80 Aligned_cols=64 Identities=16% Similarity=0.254 Sum_probs=40.9
Q ss_pred ccHHHHHhcCCCCeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccccc-----HHHHHhCCCCc
Q 009987 54 TNFDAVLRDTPATYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKIN-----TNLCDKFSVGH 128 (521)
Q Consensus 54 ~~f~~~l~~~~~~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~-----~~l~~~f~I~~ 128 (521)
+.+++.+... + ++.|..+|||+|++....+++.. +.+-.+|.+.+.+ ..+.+..+...
T Consensus 9 ~~v~~~i~~~--~--v~vy~~~~Cp~C~~~k~~L~~~~-------------i~~~~~dv~~~~~~~~~~~~l~~~~g~~t 71 (598)
T 2x8g_A 9 QWLRKTVDSA--A--VILFSKTTCPYCKKVKDVLAEAK-------------IKHATIELDQLSNGSAIQKCLASFSKIET 71 (598)
T ss_dssp HHHHHHHHHC--S--EEEEECTTCHHHHHHHHHHHHTT-------------CCCEEEEGGGSTTHHHHHHHTHHHHSCCC
T ss_pred HHHHHHhccC--C--EEEEECCCChhHHHHHHHHHHCC-------------CCcEEEEcccCcchHHHHHHHHHHhCCce
Confidence 4566667653 2 78899999999999887777532 2233455532211 23334568889
Q ss_pred CceEEE
Q 009987 129 YPMLLW 134 (521)
Q Consensus 129 yPTl~~ 134 (521)
+|.+++
T Consensus 72 vP~v~i 77 (598)
T 2x8g_A 72 VPQMFV 77 (598)
T ss_dssp SCEEEE
T ss_pred eCEEEE
Confidence 999854
No 321
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=71.60 E-value=2.4 Score=29.32 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=14.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 009987 483 GAALAIALASCAFGALACYWRSQQKNR 509 (521)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (521)
|...++++.....+++.+|||.++.++
T Consensus 16 gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 16 GMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 333345554455566677876554433
No 322
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=70.60 E-value=2.9 Score=38.34 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=33.4
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+...++++||+|+||+++..+|+.. ....|..+.+.+++.|++.+.
T Consensus 158 ~~~~a~~~gv~g~Pt~~v~~~~~~~-------------~~~~g~~~~e~~~~~i~~~~~ 203 (208)
T 3kzq_A 158 QLSLAKSLGVNSYPSLVLQINDAYF-------------PIEVDYLSTEPTLKLIRERII 203 (208)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEE-------------EECCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccEEEEEECCEEE-------------EeeCCCCCHHHHHHHHHHHHh
Confidence 4556788999999999997655332 223567788888888887654
No 323
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.33 E-value=1.9 Score=29.76 Aligned_cols=21 Identities=14% Similarity=0.086 Sum_probs=11.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHh
Q 009987 487 AIALASCAFGALACYWRSQQK 507 (521)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~ 507 (521)
++++.....++..+|||.++.
T Consensus 19 Gv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 19 GLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHhhhhhh
Confidence 355544555666678765533
No 324
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=62.67 E-value=5.9 Score=36.55 Aligned_cols=41 Identities=15% Similarity=0.151 Sum_probs=31.4
Q ss_pred cHHHH-HhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 117 NTNLC-DKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 117 ~~~l~-~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+...+ +++||+|+||+++ +|+ .+.|..+.+.|.+.|.+...
T Consensus 156 ~~~~a~~~~GV~GtPtfvv--ng~----------------~~~G~~~~e~l~~~i~~~~~ 197 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI--DGI----------------LLAGTHDWASLRPQILARLN 197 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE--TTE----------------ECTTCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCccCCEEEE--CCE----------------EEeCCCCHHHHHHHHHHHhh
Confidence 34566 8999999999987 331 35678899999999987654
No 325
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=61.65 E-value=6 Score=35.64 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=31.2
Q ss_pred ccHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 116 INTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 116 ~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
.+...++++||+|+||+++ +|+. +....|..+.+.+.+.|+..+
T Consensus 140 ~~~~~a~~~gv~GtPtfvv--ng~~-------------~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 140 NAKMLSEKSGISSVPTFVV--NGKY-------------NVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHHTCCSSSEEEE--TTTE-------------EECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE--CCEE-------------EEecCCCCCHHHHHHHHHHHH
Confidence 3556788999999999987 3321 112357788888888887654
No 326
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=61.33 E-value=6.7 Score=33.04 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=38.5
Q ss_pred cccHHHHHhcCCCCeEEEEEec-----CCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeecccc--ccHHHHHhCC
Q 009987 53 ATNFDAVLRDTPATYAVVEFFA-----NWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALK--INTNLCDKFS 125 (521)
Q Consensus 53 ~~~f~~~l~~~~~~~vlV~FyA-----~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d--~~~~l~~~f~ 125 (521)
.+..++.|.++ + +|.|.- |.||.|++....+.+. . ...+..+|...+ ....+.+.-|
T Consensus 10 ~e~i~~~i~~~--~--VvvF~Kgt~~~P~C~fc~~ak~lL~~~----g--------v~~~~~~~v~~~~~~r~~l~~~sg 73 (118)
T 2wul_A 10 AEQLDALVKKD--K--VVVFLKGTPEQPQCGFSNAVVQILRLH----G--------VRDYAAYNVLDDPELRQGIKDYSN 73 (118)
T ss_dssp HHHHHHHHHHS--S--EEEEESBCSSSBSSHHHHHHHHHHHHT----T--------CCSCEEEETTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHhcC--C--EEEEEcCCCCCCCCHHHHHHHHHHHHh----C--------CcCeEeecccCCHHHHHHHHHhcc
Confidence 34566777774 2 566754 6799999987666542 1 112344555322 2233445557
Q ss_pred CCcCceEEE
Q 009987 126 VGHYPMLLW 134 (521)
Q Consensus 126 I~~yPTl~~ 134 (521)
-+.+|.+++
T Consensus 74 ~~TvPqIFI 82 (118)
T 2wul_A 74 WPTIPQVYL 82 (118)
T ss_dssp CCSSCEEEE
T ss_pred CCCCCeEeE
Confidence 778888866
No 327
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=56.39 E-value=7.9 Score=34.90 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=27.3
Q ss_pred HHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 118 TNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 118 ~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
....+++||+|+||+++ +|+.. ..+.|..+.+++.++|
T Consensus 144 ~~~a~~~GV~gtPtf~i--ng~~~-------------~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI--NGLVQ-------------PGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHHTCCSSSEEEE--TTEEC-------------TTCCTTSCHHHHHHHH
T ss_pred HHHHHHCCCCccCEEEE--CCEEc-------------cCCCCCCCHHHHHHHh
Confidence 45678899999999988 34322 2346778888887765
No 328
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=55.28 E-value=85 Score=25.67 Aligned_cols=84 Identities=12% Similarity=0.188 Sum_probs=62.2
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeeccccccHHHHHhCCCCcCceEEEecCCcccCCCCCC
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDCALKINTNLCDKFSVGHYPMLLWGSPSKFVAGSWEP 147 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc~~d~~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~ 147 (521)
....|.|.--+..++....+.++-+.+... +...+-.||. -+++++++.+.|-.+||++=..+.
T Consensus 13 L~lLyvag~tp~S~~ai~nL~~i~e~~l~~-----~~y~LeVIDv--~eqPeLAE~~~IvATPTLIK~~P~--------- 76 (105)
T 1t4y_A 13 LLLQLFVDTRPLSQHIVQRVKNILAAVEAT-----VPISLQVINV--ADQPQLVEYYRLVVTPALVKIGPG--------- 76 (105)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHCCS-----SCEEEEEEET--TTCHHHHHHTTCCSSSEEEEEESS---------
T ss_pred hheeeEeCCCccHHHHHHHHHHHHHHhccC-----CceEEEEeec--ccCHHHHhHcCeeeccHhhccCCC---------
Confidence 345788888899998888888877766521 4578888897 479999999999999998753221
Q ss_pred CccchhhhhccccCCHHHHHHHHHH
Q 009987 148 NQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 148 ~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
...++.|.--.+.|..|.-+
T Consensus 77 -----P~rriiGd~i~~ql~~wwpr 96 (105)
T 1t4y_A 77 -----SRQVLSGIDLTDQLANQLPQ 96 (105)
T ss_dssp -----SCEEEESSCHHHHHHHHHHH
T ss_pred -----CceEEeChHHHHHHHHHhHH
Confidence 12456777777788877644
No 329
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=54.07 E-value=9.4 Score=34.62 Aligned_cols=41 Identities=10% Similarity=-0.082 Sum_probs=30.6
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhcc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTS 175 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~ 175 (521)
+....+++||.|+||+++ +|+ .+.|....+.|.+.|.+...
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi--~g~----------------~~~G~~~~~~l~~~l~~~~~ 196 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL--GDE----------------MWWGNDRLFMLESAMGRLCR 196 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTE----------------EEESGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE--CCE----------------EEECCCCHHHHHHHHhcccc
Confidence 455678999999999987 331 35677788888888877554
No 330
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=45.31 E-value=12 Score=29.97 Aligned_cols=18 Identities=22% Similarity=0.554 Sum_probs=15.8
Q ss_pred CChHHHHHHHHHHhCCCc
Q 009987 432 WDQDEVFKFLTNYYGNTL 449 (521)
Q Consensus 432 w~e~~V~~fL~~~Y~~~~ 449 (521)
-..++|..||+..||.--
T Consensus 57 ~Sd~eI~~~mv~RYGdfV 74 (90)
T 2kw0_A 57 KSKKEIVDYMVARYGNFV 74 (90)
T ss_dssp CCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHhcCCeE
Confidence 568999999999999863
No 331
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=45.07 E-value=12 Score=29.56 Aligned_cols=17 Identities=18% Similarity=0.501 Sum_probs=15.3
Q ss_pred CChHHHHHHHHHHhCCC
Q 009987 432 WDQDEVFKFLTNYYGNT 448 (521)
Q Consensus 432 w~e~~V~~fL~~~Y~~~ 448 (521)
-..++|..||+..||.-
T Consensus 60 ~sd~eI~~~~v~RYG~f 76 (84)
T 2hl7_A 60 KSDGEIVDYMVARYGDF 76 (84)
T ss_dssp CCHHHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHhcCCe
Confidence 56899999999999986
No 332
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=44.99 E-value=15 Score=30.31 Aligned_cols=21 Identities=10% Similarity=0.186 Sum_probs=17.0
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
++.|+.|+|+.|++....+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456889999999998776665
No 333
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=43.59 E-value=16 Score=30.99 Aligned_cols=21 Identities=24% Similarity=0.524 Sum_probs=17.5
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
++.|+.++|+.|++....+++
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~ 23 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEE 23 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 567889999999998777765
No 334
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=43.51 E-value=16 Score=23.63 Aligned_cols=24 Identities=25% Similarity=0.610 Sum_probs=14.8
Q ss_pred eecHHHHHHHHHHhhhhhHHHHHHHHHH
Q 009987 479 VVPVGAALAIALASCAFGALACYWRSQQ 506 (521)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (521)
++-+|.++...+.+..| +|||-++
T Consensus 11 t~i~gl~vif~~lg~tf----lywrgrr 34 (40)
T 2l9u_A 11 TVIAGLVVIFMMLGGTF----LYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHhCcee----EEEcccc
Confidence 33446666556665555 8998653
No 335
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=43.45 E-value=21 Score=33.56 Aligned_cols=43 Identities=7% Similarity=0.095 Sum_probs=32.0
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhccc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQTSR 176 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l~~ 176 (521)
+...++++||+|+||+++ +|+ ..+.|..+.+.+.+.|++.+..
T Consensus 172 ~~~~a~~~Gv~GvPtfvv--~g~---------------~~v~Ga~~~e~~~~~i~~~~~~ 214 (239)
T 3gl5_A 172 DEREAAQLGATGVPFFVL--DRA---------------YGVSGAQPAEVFTQALTQAWGE 214 (239)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTT---------------EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCeeCeEEE--CCc---------------EeecCCCCHHHHHHHHHHHHhh
Confidence 345677899999999987 221 1346888999999998887653
No 336
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=42.89 E-value=8.3 Score=34.33 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=29.3
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHHhc
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINKQT 174 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~~l 174 (521)
+...++++||.|+||+++ +|+.. ....|..+.+.+.+.|++.+
T Consensus 151 ~~~~a~~~gv~gtPt~~i--ng~~~-------------~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 151 WKASYDVAKIQGVPAYVV--NGKYL-------------IYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGGHHHHHHHHCSSEEEE--TTTEE-------------ECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEE-------------eccCCCCCHHHHHHHHHHHH
Confidence 345678899999999876 33211 11236678899998887765
No 337
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=40.49 E-value=19 Score=29.93 Aligned_cols=21 Identities=14% Similarity=0.165 Sum_probs=17.4
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
++.|+.|+|+.|++..-.+++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~ 27 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLED 27 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 567889999999998777765
No 338
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=35.20 E-value=26 Score=29.17 Aligned_cols=21 Identities=24% Similarity=0.602 Sum_probs=16.8
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
+..|+.|+|+.|++....+++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~ 22 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNR 22 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHH
Confidence 456789999999998766664
No 339
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=35.01 E-value=28 Score=31.52 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=27.2
Q ss_pred cHHHHHhCCCCcCceEEEecCCcccCCCCCCCccchhhhhccccCCHHHHHHHHHH
Q 009987 117 NTNLCDKFSVGHYPMLLWGSPSKFVAGSWEPNQEKKEIRALEDWQTADGLLTWINK 172 (521)
Q Consensus 117 ~~~l~~~f~I~~yPTl~~f~~g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i~~ 172 (521)
+...+++.||.|+||+++ +| ..+.|....+.|.++|.+
T Consensus 162 ~~~~a~~~Gv~GvPtfvv--~g----------------~~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 162 IGEDAVARGIFGSPFFLV--DD----------------EPFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHHTTCCSSSEEEE--TT----------------EEEESGGGHHHHHHHHHT
T ss_pred HHHHHHHCCCCcCCEEEE--CC----------------EEEecCCCHHHHHHHHhc
Confidence 445677899999999988 22 235677777777777753
No 340
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=36.42 E-value=11 Score=21.03 Aligned_cols=13 Identities=46% Similarity=1.122 Sum_probs=10.8
Q ss_pred cCChHHHHHHHHH
Q 009987 347 FVCEECRQHFYQM 359 (521)
Q Consensus 347 f~C~~C~~hf~~~ 359 (521)
|.|++|++.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (26)
T 2lvu_A 3 YVCERCGKRFVQS 15 (26)
Confidence 7899999999653
No 341
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=29.49 E-value=50 Score=25.58 Aligned_cols=8 Identities=0% Similarity=0.355 Sum_probs=3.6
Q ss_pred Hhhhhhhh
Q 009987 506 QKNRKYKY 513 (521)
Q Consensus 506 ~~~~~~~~ 513 (521)
.-||.|.|
T Consensus 39 ~DrrE~~k 46 (79)
T 2knc_B 39 HDRKEFAK 46 (79)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 342
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=29.09 E-value=38 Score=28.21 Aligned_cols=21 Identities=19% Similarity=0.441 Sum_probs=16.8
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
+..|+.|+|+.|++....+++
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~ 25 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDD 25 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHH
Confidence 556779999999998766664
No 343
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=28.82 E-value=32 Score=28.78 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=27.7
Q ss_pred CeEEEEEecCCChhHhhhhHHHHHHHHHhCCCCCCCCCeEEEEEeec
Q 009987 66 TYAVVEFFANWCPACRNYKPQYEKVARLFNGPNAAHPGIILMTRVDC 112 (521)
Q Consensus 66 ~~vlV~FyA~WCg~C~~~~P~~~~lA~~~~~~~~~~~~~v~~~~VDc 112 (521)
+.+|+.|.-|.|+-|......++++..+ ..+..||.
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~lede-----------Y~ilrVNI 37 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSE-----------YDILHVDI 37 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTT-----------EEEEEEEC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcc-----------ccEEEEEe
Confidence 4479999999999999888777555443 56778885
No 344
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=28.63 E-value=33 Score=31.15 Aligned_cols=19 Identities=5% Similarity=0.120 Sum_probs=15.8
Q ss_pred ccHHHHHhCCCCcCceEEE
Q 009987 116 INTNLCDKFSVGHYPMLLW 134 (521)
Q Consensus 116 ~~~~l~~~f~I~~yPTl~~ 134 (521)
.+....+.+||+++||+++
T Consensus 38 ~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 38 QQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHcCCCcCCEEEE
Confidence 3456789999999999976
No 345
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=24.90 E-value=41 Score=27.96 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=16.8
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
+..|+.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 466789999999998766654
No 346
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=24.64 E-value=66 Score=28.84 Aligned_cols=27 Identities=15% Similarity=0.302 Sum_probs=23.3
Q ss_pred eEEEEEecCCChhHhhhhHHHHHHHHH
Q 009987 67 YAVVEFFANWCPACRNYKPQYEKVARL 93 (521)
Q Consensus 67 ~vlV~FyA~WCg~C~~~~P~~~~lA~~ 93 (521)
..|+.|+..-||+|....+.++++++.
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~~ 34 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQE 34 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCchhhcchHHHHHHHhc
Confidence 457888899999999999999999883
No 347
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=24.33 E-value=83 Score=28.19 Aligned_cols=28 Identities=25% Similarity=0.490 Sum_probs=25.3
Q ss_pred EEEEEecCCChhHhhhhHHHHHHHHHhC
Q 009987 68 AVVEFFANWCPACRNYKPQYEKVARLFN 95 (521)
Q Consensus 68 vlV~FyA~WCg~C~~~~P~~~~lA~~~~ 95 (521)
.|..|+-+-||+|-...|.++++++.+.
T Consensus 4 ~I~~~~D~~CP~cy~~~~~l~~l~~~~~ 31 (208)
T 3kzq_A 4 KLYYVHDPMCSWCWGYKPTIEKLKQQLP 31 (208)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEECCCCchhhhhhHHHHHHHHhCC
Confidence 4788889999999999999999999874
No 348
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=24.16 E-value=13 Score=24.86 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=9.7
Q ss_pred ccceeecHHHHHHHHHHh
Q 009987 475 TNAVVVPVGAALAIALAS 492 (521)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~ 492 (521)
.+.+.+.+++++++++..
T Consensus 10 ~~~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 10 SGNLAVIGGVAVGVVLLL 27 (41)
T ss_dssp CSSTHHHHHHHHHHHHHH
T ss_pred CceEEEEeehhHHHHHHH
Confidence 344445666666665533
No 349
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=23.28 E-value=13 Score=32.46 Aligned_cols=17 Identities=24% Similarity=0.782 Sum_probs=15.1
Q ss_pred CCCCCCCCCChhhhccC
Q 009987 404 KIIWPPKQLCSSCYRSH 420 (521)
Q Consensus 404 k~~~P~~~~Cp~C~~~~ 420 (521)
+++|||...||.|...+
T Consensus 55 ~~~~PPr~~Cp~C~s~~ 71 (145)
T 3irb_A 55 RIFVPARSYCEHCFVKI 71 (145)
T ss_dssp CEEESCCSEETTTTEEC
T ss_pred cEEcCchhhCcCCCCCc
Confidence 69999999999999763
No 350
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=22.99 E-value=48 Score=25.14 Aligned_cols=28 Identities=39% Similarity=0.394 Sum_probs=11.8
Q ss_pred cccccccccceeecHHHHHHHHHHhhhhhHHHH
Q 009987 468 LEDLVVSTNAVVVPVGAALAIALASCAFGALAC 500 (521)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (521)
+.|++.++ +| |+|+. |++|-.+.|+|.|
T Consensus 5 i~dhsptt-gv-vtv~v---iliavaalg~li~ 32 (90)
T 1zza_A 5 IMDHSPTT-GV-VTVIV---ILIAIAALGALIL 32 (90)
T ss_dssp SCTTTTHH-HH-HHHHH---HHHHHHHHHHHHH
T ss_pred eeccCCCc-ce-EEehh---HHHHHHHHHHHHH
Confidence 44554443 32 33333 3444444444443
No 351
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=22.63 E-value=82 Score=20.46 Aligned_cols=15 Identities=40% Similarity=0.364 Sum_probs=11.9
Q ss_pred HHHHHhhhhhhhhhh
Q 009987 502 WRSQQKNRKYKYQLH 516 (521)
Q Consensus 502 ~~~~~~~~~~~~~~~ 516 (521)
.|-|+|+.|-++...
T Consensus 21 iRPQ~Kr~K~~~~m~ 35 (37)
T 2rdd_B 21 LRPQQKRTKEHKKLM 35 (37)
T ss_dssp HHHHHHHHHHHTTGG
T ss_pred hhhHHHHHHHHHHHH
Confidence 499999999877653
No 352
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=28.29 E-value=18 Score=20.53 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=10.6
Q ss_pred cCChHHHHHHHHH
Q 009987 347 FVCEECRQHFYQM 359 (521)
Q Consensus 347 f~C~~C~~hf~~~ 359 (521)
|.|+.|.+.|...
T Consensus 3 ~~C~~C~k~f~~~ 15 (29)
T 2lvt_A 3 CQCVMCGKAFTQA 15 (29)
Confidence 7899999999643
No 353
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=21.73 E-value=1e+02 Score=18.39 Aligned_cols=23 Identities=35% Similarity=0.478 Sum_probs=12.3
Q ss_pred ecHHHHHHHHHHhhhhhHHHHHH
Q 009987 480 VPVGAALAIALASCAFGALACYW 502 (521)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~ 502 (521)
.||-|++.+.+.+.+-+.|.+.|
T Consensus 2 spiVA~~lLIviav~aaVllylW 24 (26)
T 3j1r_A 2 SPVIATLLLILIAVAAAVLLYTW 24 (26)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 46666665544444444555555
No 354
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=26.55 E-value=20 Score=20.31 Aligned_cols=13 Identities=31% Similarity=0.940 Sum_probs=10.7
Q ss_pred cCChHHHHHHHHH
Q 009987 347 FVCEECRQHFYQM 359 (521)
Q Consensus 347 f~C~~C~~hf~~~ 359 (521)
|.|..|.+.|...
T Consensus 4 ~~C~~C~k~f~~~ 16 (30)
T 2lvr_A 4 YVCIHCQRQFADP 16 (30)
Confidence 7899999999653
No 355
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=20.54 E-value=71 Score=29.16 Aligned_cols=40 Identities=13% Similarity=-0.000 Sum_probs=0.0
Q ss_pred cccHHHHHhCCCCcCceEEEecC--CcccCCCCCCCccchhhhhccccCCHHHHHHHH
Q 009987 115 KINTNLCDKFSVGHYPMLLWGSP--SKFVAGSWEPNQEKKEIRALEDWQTADGLLTWI 170 (521)
Q Consensus 115 d~~~~l~~~f~I~~yPTl~~f~~--g~~~~~~~~~~~~~~~v~~~~G~~~~~~L~~~i 170 (521)
..+...++++||.|+||+++-.+ | ..+.|....+.+.+.|
T Consensus 169 ~~~~~~a~~~gv~G~Ptfvv~~~g~~----------------~~~~G~~~~~~l~~~l 210 (226)
T 1r4w_A 169 RETTGAACKYGAFGLPTTVAHVDGKT----------------YMLFGSDRMELLAYLL 210 (226)
T ss_dssp HHHHHHHHHTTCCSSCEEEEEETTEE----------------EEEESTTCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEeCCCCc----------------CceeCCCcHHHHHHHh
No 356
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=20.29 E-value=51 Score=28.28 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=16.5
Q ss_pred EEEEecCCChhHhhhhHHHHH
Q 009987 69 VVEFFANWCPACRNYKPQYEK 89 (521)
Q Consensus 69 lV~FyA~WCg~C~~~~P~~~~ 89 (521)
+..|+.|+|+.|++....+++
T Consensus 4 itiY~~p~C~~crkak~~L~~ 24 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRN 24 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456789999999998766654
Done!