Query 009994
Match_columns 520
No_of_seqs 392 out of 3243
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:33:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009994.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009994hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qa1_A PGAE, polyketide oxygen 100.0 2.5E-45 8.6E-50 388.0 27.1 391 52-473 9-430 (500)
2 3ihg_A RDME; flavoenzyme, anth 100.0 5.9E-47 2E-51 405.1 14.0 407 52-476 3-458 (535)
3 2qa2_A CABE, polyketide oxygen 100.0 1.3E-44 4.4E-49 382.4 28.2 391 52-473 10-431 (499)
4 2r0c_A REBC; flavin adenine di 100.0 1.5E-44 5.2E-49 386.7 17.6 400 52-472 24-481 (549)
5 3rp8_A Flavoprotein monooxygen 100.0 4.5E-42 1.6E-46 354.9 34.1 355 52-426 21-386 (407)
6 1pn0_A Phenol 2-monooxygenase; 100.0 3.2E-43 1.1E-47 383.2 24.5 392 54-458 8-490 (665)
7 3fmw_A Oxygenase; mithramycin, 100.0 3E-42 1E-46 369.2 23.8 356 52-428 47-412 (570)
8 2dkh_A 3-hydroxybenzoate hydro 100.0 8.4E-42 2.9E-46 371.5 23.7 394 53-458 31-478 (639)
9 2x3n_A Probable FAD-dependent 100.0 4.3E-41 1.5E-45 346.6 23.7 359 53-429 5-377 (399)
10 4hb9_A Similarities with proba 100.0 5.9E-40 2E-44 338.7 20.3 341 55-407 2-382 (412)
11 1k0i_A P-hydroxybenzoate hydro 100.0 2.7E-39 9.3E-44 332.5 19.8 375 54-445 2-388 (394)
12 3c96_A Flavin-containing monoo 100.0 2E-37 7E-42 320.3 28.3 360 53-429 3-396 (410)
13 2vou_A 2,6-dihydroxypyridine h 100.0 2.5E-37 8.4E-42 318.3 27.6 328 52-412 3-371 (397)
14 3e1t_A Halogenase; flavoprotei 100.0 1.8E-36 6.3E-41 321.8 28.5 357 53-416 6-376 (512)
15 2xdo_A TETX2 protein; tetracyc 100.0 4.7E-36 1.6E-40 308.9 29.7 335 52-411 24-388 (398)
16 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.2E-36 4E-41 311.3 24.4 323 53-402 10-343 (379)
17 3oz2_A Digeranylgeranylglycero 100.0 6.7E-36 2.3E-40 306.4 26.7 329 53-399 3-340 (397)
18 3i3l_A Alkylhalidase CMLS; fla 100.0 3.3E-36 1.1E-40 322.9 23.8 361 52-419 21-393 (591)
19 3atr_A Conserved archaeal prot 100.0 1.6E-35 5.6E-40 310.0 26.3 340 54-415 6-361 (453)
20 3nix_A Flavoprotein/dehydrogen 100.0 2.3E-34 7.8E-39 298.3 29.4 338 53-400 4-350 (421)
21 3cgv_A Geranylgeranyl reductas 100.0 7.6E-34 2.6E-38 291.8 27.7 354 54-429 4-366 (397)
22 2pyx_A Tryptophan halogenase; 100.0 7.6E-32 2.6E-36 287.2 32.6 344 53-418 6-424 (526)
23 3c4a_A Probable tryptophan hyd 100.0 6E-33 2.1E-37 284.0 15.4 315 55-411 1-333 (381)
24 2gmh_A Electron transfer flavo 100.0 3E-30 1E-34 277.3 31.1 344 52-410 33-426 (584)
25 2weu_A Tryptophan 5-halogenase 100.0 7.8E-30 2.7E-34 271.0 30.6 340 54-421 2-419 (511)
26 2aqj_A Tryptophan halogenase, 100.0 8.2E-30 2.8E-34 272.4 29.1 336 53-418 4-408 (538)
27 2e4g_A Tryptophan halogenase; 100.0 1.3E-29 4.3E-34 271.3 29.9 339 53-418 24-439 (550)
28 3ihm_A Styrene monooxygenase A 99.9 2.9E-26 9.8E-31 238.0 17.5 322 52-405 20-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 1.8E-25 6.1E-30 235.9 9.8 308 52-397 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.4E-17 4.9E-22 166.4 18.5 293 54-372 2-327 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 2.1E-14 7.3E-19 146.0 16.7 195 151-370 159-361 (382)
32 2qcu_A Aerobic glycerol-3-phos 99.5 1.8E-13 6.2E-18 144.4 19.9 213 152-370 145-371 (501)
33 3da1_A Glycerol-3-phosphate de 99.5 3.7E-13 1.3E-17 143.7 21.0 174 52-226 16-242 (561)
34 2gag_B Heterotetrameric sarcos 99.5 5.5E-13 1.9E-17 136.6 19.8 195 152-369 170-373 (405)
35 1y56_B Sarcosine oxidase; dehy 99.5 1.2E-12 4.2E-17 133.0 21.6 196 152-370 145-354 (382)
36 3jsk_A Cypbp37 protein; octame 99.5 3.3E-13 1.1E-17 133.4 15.8 141 53-223 78-257 (344)
37 3dme_A Conserved exported prot 99.5 1.7E-12 5.7E-17 130.9 21.0 72 152-226 146-220 (369)
38 1rp0_A ARA6, thiazole biosynth 99.5 7.4E-13 2.5E-17 129.1 16.4 141 53-223 38-197 (284)
39 3ps9_A TRNA 5-methylaminomethy 99.5 1.1E-12 3.8E-17 143.5 18.9 160 53-224 271-481 (676)
40 2gf3_A MSOX, monomeric sarcosi 99.5 3.6E-12 1.2E-16 129.7 21.0 164 54-224 3-213 (389)
41 3nyc_A D-arginine dehydrogenas 99.5 1E-12 3.5E-17 133.3 16.7 69 151-226 149-219 (381)
42 1qo8_A Flavocytochrome C3 fuma 99.5 1.2E-13 4.3E-18 147.8 10.1 165 52-223 119-318 (566)
43 3kkj_A Amine oxidase, flavin-c 99.4 2.2E-12 7.7E-17 123.5 17.0 38 53-90 1-38 (336)
44 1y0p_A Fumarate reductase flav 99.4 2.9E-13 9.9E-18 145.2 10.6 171 52-223 124-323 (571)
45 3pvc_A TRNA 5-methylaminomethy 99.4 1.1E-12 3.6E-17 143.9 14.6 167 52-223 262-476 (689)
46 2oln_A NIKD protein; flavoprot 99.4 1.8E-11 6.2E-16 125.0 22.5 165 54-225 4-217 (397)
47 3v76_A Flavoprotein; structura 99.4 3.4E-12 1.2E-16 131.1 15.3 143 52-217 25-187 (417)
48 4at0_A 3-ketosteroid-delta4-5a 99.4 1.7E-12 5.7E-17 137.3 12.3 62 157-220 203-267 (510)
49 2gjc_A Thiazole biosynthetic e 99.4 5.4E-12 1.9E-16 124.0 14.7 143 52-224 63-246 (326)
50 2cul_A Glucose-inhibited divis 99.3 8.4E-12 2.9E-16 117.8 14.2 132 53-225 2-133 (232)
51 2rgh_A Alpha-glycerophosphate 99.3 3.7E-11 1.3E-15 128.5 20.1 72 153-225 185-259 (571)
52 3dje_A Fructosyl amine: oxygen 99.3 2.3E-11 7.8E-16 126.0 16.0 63 151-218 156-222 (438)
53 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.1E-11 3.8E-16 128.7 12.7 154 52-226 24-211 (447)
54 3ka7_A Oxidoreductase; structu 99.3 2.2E-10 7.4E-15 118.0 21.9 57 157-219 197-254 (425)
55 1kf6_A Fumarate reductase flav 99.3 2.8E-11 9.7E-16 130.0 14.8 69 156-224 134-204 (602)
56 3nlc_A Uncharacterized protein 99.3 3.1E-11 1.1E-15 127.5 14.4 165 52-226 105-290 (549)
57 4dgk_A Phytoene dehydrogenase; 99.3 1.3E-10 4.5E-15 122.4 19.1 63 157-224 222-285 (501)
58 1d4d_A Flavocytochrome C fumar 99.3 5.2E-12 1.8E-16 135.2 8.0 163 53-223 125-323 (572)
59 3cp8_A TRNA uridine 5-carboxym 99.3 5.6E-11 1.9E-15 126.6 15.5 152 52-221 19-178 (641)
60 3ces_A MNMG, tRNA uridine 5-ca 99.3 4.7E-11 1.6E-15 127.2 14.9 156 53-224 27-188 (651)
61 2zxi_A TRNA uridine 5-carboxym 99.2 7.8E-11 2.7E-15 125.0 15.6 152 53-222 26-185 (637)
62 3axb_A Putative oxidoreductase 99.2 1.6E-10 5.5E-15 120.0 16.9 69 152-226 177-264 (448)
63 2ywl_A Thioredoxin reductase r 99.2 6.6E-11 2.3E-15 106.8 12.2 117 55-225 2-118 (180)
64 3c4n_A Uncharacterized protein 99.2 3.7E-11 1.3E-15 123.2 11.8 168 53-227 35-248 (405)
65 2gqf_A Hypothetical protein HI 99.2 7.7E-11 2.6E-15 120.5 12.5 138 54-217 4-168 (401)
66 1chu_A Protein (L-aspartate ox 99.2 5.5E-11 1.9E-15 126.2 11.7 63 157-219 139-210 (540)
67 3nrn_A Uncharacterized protein 99.2 1.1E-09 3.6E-14 112.8 20.8 59 157-224 190-249 (421)
68 2uzz_A N-methyl-L-tryptophan o 99.2 1.4E-10 4.7E-15 117.3 13.6 158 54-218 2-205 (372)
69 3i6d_A Protoporphyrinogen oxid 99.2 5.1E-10 1.7E-14 116.7 17.8 62 54-115 5-87 (470)
70 2wdq_A Succinate dehydrogenase 99.1 1.4E-10 4.9E-15 124.3 12.0 63 156-219 143-208 (588)
71 2h88_A Succinate dehydrogenase 99.1 3.2E-10 1.1E-14 121.9 14.5 62 157-219 156-219 (621)
72 3fbs_A Oxidoreductase; structu 99.1 4.7E-10 1.6E-14 109.3 13.8 113 54-219 2-114 (297)
73 2bs2_A Quinol-fumarate reducta 99.1 1E-09 3.5E-14 118.8 17.4 62 157-219 159-222 (660)
74 3ab1_A Ferredoxin--NADP reduct 99.1 3E-10 1E-14 114.4 12.2 126 52-224 12-138 (360)
75 2zbw_A Thioredoxin reductase; 99.1 3.8E-10 1.3E-14 112.2 12.9 124 53-224 4-128 (335)
76 4a9w_A Monooxygenase; baeyer-v 99.1 2.9E-10 9.8E-15 113.8 11.2 129 54-218 3-133 (357)
77 1jnr_A Adenylylsulfate reducta 99.1 8.8E-11 3E-15 127.3 7.4 65 155-219 150-220 (643)
78 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 8.3E-10 2.8E-14 110.3 13.7 35 55-89 2-39 (342)
79 1c0p_A D-amino acid oxidase; a 99.1 2E-09 6.9E-14 108.4 16.6 36 52-87 4-39 (363)
80 4fk1_A Putative thioredoxin re 99.1 8E-10 2.7E-14 108.5 12.4 114 52-217 4-117 (304)
81 3g3e_A D-amino-acid oxidase; F 99.1 8.6E-10 2.9E-14 110.6 12.5 33 55-87 1-39 (351)
82 3gyx_A Adenylylsulfate reducta 99.0 7.2E-10 2.5E-14 119.9 11.6 66 154-219 164-235 (662)
83 2e5v_A L-aspartate oxidase; ar 99.0 7.4E-10 2.5E-14 115.7 11.3 62 156-222 119-181 (472)
84 3itj_A Thioredoxin reductase 1 99.0 3.9E-10 1.3E-14 112.0 8.5 121 52-218 20-143 (338)
85 2q0l_A TRXR, thioredoxin reduc 99.0 2.3E-09 8E-14 105.3 13.6 115 55-220 2-117 (311)
86 2gv8_A Monooxygenase; FMO, FAD 99.0 1.5E-09 5E-14 112.8 12.5 157 53-218 5-178 (447)
87 2ivd_A PPO, PPOX, protoporphyr 99.0 7.3E-09 2.5E-13 108.3 17.5 67 50-116 12-93 (478)
88 1pj5_A N,N-dimethylglycine oxi 99.0 2.1E-09 7.1E-14 120.2 13.9 69 151-225 146-216 (830)
89 1vdc_A NTR, NADPH dependent th 99.0 7.9E-10 2.7E-14 109.8 7.6 119 54-219 8-126 (333)
90 3f8d_A Thioredoxin reductase ( 98.9 3.4E-09 1.1E-13 104.4 11.7 113 53-218 14-126 (323)
91 3lzw_A Ferredoxin--NADP reduct 98.9 3.1E-09 1.1E-13 105.1 11.3 116 54-217 7-123 (332)
92 2q7v_A Thioredoxin reductase; 98.9 3.4E-09 1.2E-13 104.9 11.3 116 53-218 7-124 (325)
93 3cty_A Thioredoxin reductase; 98.9 6.7E-09 2.3E-13 102.5 12.8 113 53-218 15-127 (319)
94 1fl2_A Alkyl hydroperoxide red 98.9 6E-09 2.1E-13 102.3 10.4 114 54-219 1-117 (310)
95 2xve_A Flavin-containing monoo 98.9 5.1E-09 1.7E-13 109.1 10.1 148 55-220 3-169 (464)
96 2a87_A TRXR, TR, thioredoxin r 98.9 8.4E-09 2.9E-13 102.6 11.1 115 52-218 12-127 (335)
97 3gwf_A Cyclohexanone monooxyge 98.9 4.1E-09 1.4E-13 111.7 9.1 135 53-219 7-149 (540)
98 3k7m_X 6-hydroxy-L-nicotine ox 98.8 8.6E-09 2.9E-13 106.2 11.0 34 55-88 2-35 (431)
99 1w4x_A Phenylacetone monooxyge 98.8 1.1E-08 3.6E-13 108.9 12.0 141 52-219 14-156 (542)
100 1trb_A Thioredoxin reductase; 98.8 7E-09 2.4E-13 102.3 9.4 114 54-219 5-118 (320)
101 3s5w_A L-ornithine 5-monooxyge 98.8 1.7E-08 5.9E-13 105.0 12.9 150 53-219 29-194 (463)
102 3d1c_A Flavin-containing putat 98.8 1.1E-08 3.9E-13 102.9 10.6 136 54-218 4-144 (369)
103 4a5l_A Thioredoxin reductase; 98.8 1.6E-08 5.4E-13 99.4 10.6 119 53-217 3-121 (314)
104 4ap3_A Steroid monooxygenase; 98.8 1.5E-08 5.2E-13 107.6 10.0 135 52-218 19-160 (549)
105 2a8x_A Dihydrolipoyl dehydroge 98.8 5.9E-09 2E-13 108.7 6.3 144 54-220 3-149 (464)
106 3nks_A Protoporphyrinogen oxid 98.7 3E-08 1E-12 103.5 11.4 35 55-89 3-39 (477)
107 1hyu_A AHPF, alkyl hydroperoxi 98.7 3.2E-08 1.1E-12 104.6 11.1 115 52-218 210-327 (521)
108 3uox_A Otemo; baeyer-villiger 98.7 3.2E-08 1.1E-12 105.0 11.1 140 52-219 7-149 (545)
109 4gcm_A TRXR, thioredoxin reduc 98.7 3E-08 1E-12 97.5 10.0 35 52-86 4-38 (312)
110 1ojt_A Surface protein; redox- 98.7 2.5E-08 8.7E-13 104.4 8.9 34 54-87 6-39 (482)
111 1dxl_A Dihydrolipoamide dehydr 98.7 2.8E-08 9.5E-13 103.7 8.6 144 52-221 4-155 (470)
112 3urh_A Dihydrolipoyl dehydroge 98.7 6.7E-08 2.3E-12 101.4 11.5 36 52-87 23-58 (491)
113 3r9u_A Thioredoxin reductase; 98.7 1.3E-07 4.6E-12 92.5 12.1 113 53-217 3-118 (315)
114 3g5s_A Methylenetetrahydrofola 98.6 9.2E-09 3.1E-13 102.1 3.4 115 55-183 2-125 (443)
115 3pl8_A Pyranose 2-oxidase; sub 98.6 1.6E-07 5.6E-12 101.1 13.4 54 170-223 273-330 (623)
116 2vvm_A Monoamine oxidase N; FA 98.6 2.9E-07 1E-11 96.6 14.7 63 53-115 38-115 (495)
117 3lov_A Protoporphyrinogen oxid 98.6 1.4E-07 4.6E-12 98.6 11.7 62 54-115 4-82 (475)
118 3l8k_A Dihydrolipoyl dehydroge 98.6 7.1E-08 2.4E-12 100.5 9.4 133 54-217 4-144 (466)
119 1ebd_A E3BD, dihydrolipoamide 98.6 1E-07 3.5E-12 99.0 10.5 138 54-220 3-148 (455)
120 1v59_A Dihydrolipoamide dehydr 98.6 4.6E-08 1.6E-12 102.3 7.9 144 54-217 5-157 (478)
121 3h8l_A NADH oxidase; membrane 98.6 5.5E-08 1.9E-12 99.5 7.8 110 55-218 2-114 (409)
122 3qfa_A Thioredoxin reductase 1 98.6 2.4E-08 8.2E-13 105.5 5.1 36 52-87 30-65 (519)
123 3lad_A Dihydrolipoamide dehydr 98.6 1.2E-07 4.1E-12 99.1 10.1 35 53-87 2-36 (476)
124 1zmd_A Dihydrolipoyl dehydroge 98.6 1.4E-07 4.7E-12 98.6 10.3 35 53-87 5-39 (474)
125 3o0h_A Glutathione reductase; 98.6 2E-07 6.8E-12 97.6 11.3 57 157-219 233-290 (484)
126 3dgz_A Thioredoxin reductase 2 98.6 2.7E-08 9.3E-13 104.3 4.0 35 52-86 4-38 (488)
127 1s3e_A Amine oxidase [flavin-c 98.5 4E-07 1.4E-11 96.2 12.9 36 54-89 4-39 (520)
128 1q1r_A Putidaredoxin reductase 98.5 1.6E-07 5.6E-12 96.8 9.5 35 53-87 3-39 (431)
129 3cgb_A Pyridine nucleotide-dis 98.5 1.3E-07 4.5E-12 98.9 7.6 114 54-218 36-153 (480)
130 2qae_A Lipoamide, dihydrolipoy 98.5 3.1E-07 1.1E-11 95.7 10.0 34 54-87 2-35 (468)
131 1zk7_A HGII, reductase, mercur 98.5 4.9E-07 1.7E-11 94.2 11.2 34 53-86 3-36 (467)
132 3iwa_A FAD-dependent pyridine 98.5 3.5E-07 1.2E-11 95.4 10.0 35 54-88 3-39 (472)
133 1nhp_A NADH peroxidase; oxidor 98.5 1.6E-07 5.5E-12 97.3 7.1 111 55-217 1-115 (447)
134 3p1w_A Rabgdi protein; GDI RAB 98.5 1.5E-06 5.2E-11 89.8 14.2 56 156-216 256-313 (475)
135 3sx6_A Sulfide-quinone reducta 98.5 1.2E-07 4.1E-12 98.0 5.6 108 55-220 5-115 (437)
136 1xdi_A RV3303C-LPDA; reductase 98.4 2.8E-07 9.4E-12 96.9 8.4 34 54-87 2-38 (499)
137 3oc4_A Oxidoreductase, pyridin 98.4 4.1E-07 1.4E-11 94.4 9.1 34 55-88 3-38 (452)
138 4dna_A Probable glutathione re 98.4 1.1E-06 3.8E-11 91.4 12.3 57 157-219 212-270 (463)
139 3dgh_A TRXR-1, thioredoxin red 98.4 1.6E-07 5.4E-12 98.4 5.7 35 52-86 7-41 (483)
140 3lxd_A FAD-dependent pyridine 98.4 3.5E-07 1.2E-11 93.8 8.2 36 53-88 8-45 (415)
141 2cdu_A NADPH oxidase; flavoenz 98.4 2.9E-07 1E-11 95.5 7.6 34 55-88 1-36 (452)
142 2hqm_A GR, grase, glutathione 98.4 4.3E-07 1.5E-11 94.9 9.0 35 53-87 10-44 (479)
143 4b1b_A TRXR, thioredoxin reduc 98.4 7.1E-07 2.4E-11 94.3 10.4 35 53-87 41-75 (542)
144 2bc0_A NADH oxidase; flavoprot 98.4 2.4E-07 8.1E-12 97.2 6.7 36 53-88 34-72 (490)
145 4b63_A L-ornithine N5 monooxyg 98.4 2.5E-06 8.5E-11 89.6 13.6 63 153-216 142-213 (501)
146 3ics_A Coenzyme A-disulfide re 98.4 4.1E-07 1.4E-11 97.6 7.8 115 52-217 34-152 (588)
147 3q9t_A Choline dehydrogenase a 98.4 2.7E-06 9.3E-11 90.5 13.6 52 167-218 216-271 (577)
148 3fg2_P Putative rubredoxin red 98.4 8.3E-07 2.8E-11 90.6 9.0 33 55-87 2-36 (404)
149 3klj_A NAD(FAD)-dependent dehy 98.3 6.5E-07 2.2E-11 90.8 7.9 36 53-88 8-43 (385)
150 2eq6_A Pyruvate dehydrogenase 98.3 3.3E-06 1.1E-10 87.8 13.1 103 54-220 169-274 (464)
151 3h28_A Sulfide-quinone reducta 98.3 1.3E-06 4.5E-11 89.9 10.0 33 55-87 3-37 (430)
152 3fpz_A Thiazole biosynthetic e 98.3 4.7E-07 1.6E-11 89.6 5.9 38 52-89 63-102 (326)
153 2yqu_A 2-oxoglutarate dehydrog 98.3 9.9E-07 3.4E-11 91.5 8.7 34 54-87 1-34 (455)
154 2v3a_A Rubredoxin reductase; a 98.3 4.8E-06 1.6E-10 84.3 13.3 100 54-219 145-245 (384)
155 3dk9_A Grase, GR, glutathione 98.3 1.3E-06 4.4E-11 91.3 8.7 35 52-86 18-52 (478)
156 1fec_A Trypanothione reductase 98.3 2.5E-06 8.7E-11 89.3 10.8 32 54-85 3-35 (490)
157 3kd9_A Coenzyme A disulfide re 98.3 9.6E-07 3.3E-11 91.5 7.4 35 54-88 3-39 (449)
158 2eq6_A Pyruvate dehydrogenase 98.3 1.5E-06 5E-11 90.5 8.7 34 54-87 6-39 (464)
159 3qvp_A Glucose oxidase; oxidor 98.3 7.8E-06 2.7E-10 86.9 14.3 52 166-217 236-293 (583)
160 4gut_A Lysine-specific histone 98.2 1.8E-06 6.1E-11 95.0 9.2 37 53-89 335-371 (776)
161 3hyw_A Sulfide-quinone reducta 98.2 2.4E-06 8.1E-11 88.0 9.5 104 56-217 4-109 (430)
162 3ntd_A FAD-dependent pyridine 98.2 2.8E-06 9.6E-11 90.6 9.7 112 55-217 2-117 (565)
163 3ef6_A Toluene 1,2-dioxygenase 98.2 1.1E-06 3.8E-11 89.9 6.3 34 55-88 3-38 (410)
164 2x8g_A Thioredoxin glutathione 98.2 2.6E-06 9E-11 91.5 9.5 35 52-86 105-139 (598)
165 2yqu_A 2-oxoglutarate dehydrog 98.2 1.1E-05 3.9E-10 83.5 13.1 99 54-219 167-266 (455)
166 2jbv_A Choline oxidase; alcoho 98.2 7.1E-06 2.4E-10 87.0 11.6 58 159-216 211-272 (546)
167 1trb_A Thioredoxin reductase; 98.2 1.8E-05 6E-10 77.6 13.6 100 55-218 146-248 (320)
168 1lvl_A Dihydrolipoamide dehydr 98.2 5.3E-06 1.8E-10 86.1 10.2 34 53-86 4-37 (458)
169 1mo9_A ORF3; nucleotide bindin 98.2 2.6E-06 9E-11 89.9 7.7 36 52-87 41-76 (523)
170 4gde_A UDP-galactopyranose mut 98.1 9E-07 3.1E-11 93.1 3.9 38 53-90 9-47 (513)
171 2gqw_A Ferredoxin reductase; f 98.1 4.7E-06 1.6E-10 85.1 9.1 36 53-88 6-43 (408)
172 1y56_A Hypothetical protein PH 98.1 4E-06 1.4E-10 87.9 8.6 111 54-217 108-219 (493)
173 3ab1_A Ferredoxin--NADP reduct 98.1 1.9E-05 6.6E-10 78.8 13.2 99 55-217 164-263 (360)
174 2wpf_A Trypanothione reductase 98.1 3.2E-06 1.1E-10 88.6 7.5 32 54-85 7-39 (495)
175 3vrd_B FCCB subunit, flavocyto 98.1 1.2E-05 4.1E-10 81.8 11.3 104 56-218 4-109 (401)
176 1nhp_A NADH peroxidase; oxidor 98.1 2E-05 6.7E-10 81.5 13.0 100 53-219 148-248 (447)
177 1fl2_A Alkyl hydroperoxide red 98.1 3E-05 1E-09 75.6 13.6 96 55-217 145-242 (310)
178 1xhc_A NADH oxidase /nitrite r 98.1 4.3E-06 1.5E-10 84.1 7.5 34 54-88 8-41 (367)
179 4eqs_A Coenzyme A disulfide re 98.1 6.9E-06 2.4E-10 84.7 8.6 33 55-87 1-35 (437)
180 2gag_A Heterotetrameric sarcos 98.1 1.6E-05 5.6E-10 89.8 12.4 34 54-87 128-161 (965)
181 1sez_A Protoporphyrinogen oxid 98.1 5.4E-06 1.8E-10 87.0 7.9 62 53-114 12-88 (504)
182 2bcg_G Secretory pathway GDP d 98.1 3.5E-06 1.2E-10 87.3 6.2 56 157-218 243-301 (453)
183 1ebd_A E3BD, dihydrolipoamide 98.1 3.1E-05 1E-09 80.2 13.3 102 54-219 170-272 (455)
184 2q0l_A TRXR, thioredoxin reduc 98.1 6.8E-05 2.3E-09 73.0 15.1 97 54-217 143-241 (311)
185 3itj_A Thioredoxin reductase 1 98.0 4E-05 1.4E-09 75.5 13.4 97 54-217 173-271 (338)
186 1gpe_A Protein (glucose oxidas 98.0 2.6E-05 8.7E-10 83.4 12.8 58 161-218 235-298 (587)
187 2yg5_A Putrescine oxidase; oxi 98.0 3.7E-06 1.3E-10 87.0 6.0 38 53-90 4-41 (453)
188 4g6h_A Rotenone-insensitive NA 98.0 1.3E-05 4.3E-10 84.2 9.9 36 52-87 40-75 (502)
189 3fim_B ARYL-alcohol oxidase; A 98.0 1.8E-05 6.3E-10 83.9 11.2 57 161-217 212-276 (566)
190 2v3a_A Rubredoxin reductase; a 98.0 6.4E-06 2.2E-10 83.4 7.1 34 54-87 4-39 (384)
191 1ges_A Glutathione reductase; 98.0 1.9E-05 6.5E-10 81.7 10.8 100 54-219 167-267 (450)
192 2qae_A Lipoamide, dihydrolipoy 98.0 3.7E-05 1.3E-09 79.9 13.0 103 54-219 174-278 (468)
193 2r9z_A Glutathione amide reduc 98.0 2.6E-05 9E-10 80.9 11.5 99 55-219 167-266 (463)
194 1v59_A Dihydrolipoamide dehydr 98.0 5E-05 1.7E-09 79.1 13.7 105 54-220 183-290 (478)
195 2b9w_A Putative aminooxidase; 98.0 6.8E-06 2.3E-10 84.2 6.5 37 53-89 5-42 (424)
196 3r9u_A Thioredoxin reductase; 98.0 7.3E-05 2.5E-09 72.8 13.6 96 55-217 148-244 (315)
197 3fg2_P Putative rubredoxin red 98.0 6E-05 2.1E-09 76.7 13.5 99 55-218 143-242 (404)
198 3lxd_A FAD-dependent pyridine 98.0 5.9E-05 2E-09 77.0 13.4 101 54-219 152-253 (415)
199 2e1m_A L-glutamate oxidase; L- 98.0 6.7E-06 2.3E-10 82.5 5.9 35 52-86 42-76 (376)
200 3cty_A Thioredoxin reductase; 97.9 5.8E-05 2E-09 74.0 12.4 96 55-218 156-253 (319)
201 3urh_A Dihydrolipoyl dehydroge 97.9 7E-05 2.4E-09 78.3 13.5 103 54-219 198-302 (491)
202 2jae_A L-amino acid oxidase; o 97.9 9.7E-06 3.3E-10 84.8 6.7 38 52-89 9-46 (489)
203 1mo9_A ORF3; nucleotide bindin 97.9 7.3E-05 2.5E-09 78.8 13.3 102 55-219 215-318 (523)
204 3hdq_A UDP-galactopyranose mut 97.9 9.1E-06 3.1E-10 82.2 5.8 37 52-88 27-63 (397)
205 1v0j_A UDP-galactopyranose mut 97.9 9E-06 3.1E-10 82.8 5.7 36 53-88 6-42 (399)
206 3ic9_A Dihydrolipoamide dehydr 97.9 8.7E-05 3E-09 77.6 13.3 102 54-219 174-276 (492)
207 1rsg_A FMS1 protein; FAD bindi 97.9 6.1E-06 2.1E-10 87.0 4.5 38 53-90 7-45 (516)
208 1vdc_A NTR, NADPH dependent th 97.9 9.7E-05 3.3E-09 72.7 12.8 98 54-218 159-260 (333)
209 1dxl_A Dihydrolipoamide dehydr 97.9 4E-05 1.4E-09 79.6 10.5 103 54-219 177-281 (470)
210 3s5w_A L-ornithine 5-monooxyge 97.9 9E-05 3.1E-09 76.8 13.1 143 54-217 227-377 (463)
211 2q7v_A Thioredoxin reductase; 97.9 0.00016 5.6E-09 70.8 14.3 96 55-218 153-250 (325)
212 1zmd_A Dihydrolipoyl dehydroge 97.9 8.6E-05 2.9E-09 77.2 12.7 104 55-219 179-284 (474)
213 1lvl_A Dihydrolipoamide dehydr 97.9 3.3E-05 1.1E-09 80.1 9.4 99 54-219 171-270 (458)
214 1d5t_A Guanine nucleotide diss 97.9 1.7E-05 5.9E-10 81.6 7.0 56 157-218 235-291 (433)
215 2zbw_A Thioredoxin reductase; 97.8 0.00014 4.8E-09 71.6 13.1 100 54-218 152-253 (335)
216 2hqm_A GR, grase, glutathione 97.8 6.1E-05 2.1E-09 78.5 10.4 100 55-219 186-287 (479)
217 2cdu_A NADPH oxidase; flavoenz 97.8 0.00011 3.8E-09 75.9 12.2 99 55-219 150-249 (452)
218 2iid_A L-amino-acid oxidase; f 97.8 2.3E-05 7.9E-10 82.1 6.9 38 52-89 31-68 (498)
219 1onf_A GR, grase, glutathione 97.8 0.00027 9.3E-09 74.0 15.1 101 54-219 176-277 (500)
220 1q1r_A Putidaredoxin reductase 97.8 0.00013 4.6E-09 74.8 12.3 100 54-218 149-251 (431)
221 3lad_A Dihydrolipoamide dehydr 97.8 0.00025 8.7E-09 73.7 14.5 102 54-219 180-282 (476)
222 1i8t_A UDP-galactopyranose mut 97.8 1.6E-05 5.6E-10 79.8 5.2 34 55-88 2-35 (367)
223 3ef6_A Toluene 1,2-dioxygenase 97.8 7.2E-05 2.5E-09 76.3 9.9 100 54-219 143-243 (410)
224 1fec_A Trypanothione reductase 97.8 0.00014 4.7E-09 76.0 11.9 100 54-219 187-290 (490)
225 2bi7_A UDP-galactopyranose mut 97.7 2.5E-05 8.6E-10 79.0 6.0 36 54-89 3-38 (384)
226 3ic9_A Dihydrolipoamide dehydr 97.7 1.1E-05 3.7E-10 84.5 3.3 34 54-87 8-41 (492)
227 2a8x_A Dihydrolipoyl dehydroge 97.7 0.0001 3.5E-09 76.4 10.7 102 54-219 171-273 (464)
228 2bc0_A NADH oxidase; flavoprot 97.7 0.00016 5.6E-09 75.5 12.0 99 54-219 194-293 (490)
229 1hyu_A AHPF, alkyl hydroperoxi 97.7 0.00029 1E-08 74.1 13.6 96 55-217 356-453 (521)
230 1xdi_A RV3303C-LPDA; reductase 97.7 0.00019 6.4E-09 75.2 11.9 99 54-219 182-281 (499)
231 4dsg_A UDP-galactopyranose mut 97.7 3.1E-05 1.1E-09 80.8 5.9 38 52-89 7-45 (484)
232 3oc4_A Oxidoreductase, pyridin 97.7 0.00034 1.2E-08 72.2 13.7 98 55-219 148-246 (452)
233 1ojt_A Surface protein; redox- 97.7 0.00015 5E-09 75.7 10.9 101 54-219 185-288 (482)
234 3iwa_A FAD-dependent pyridine 97.7 0.00017 5.9E-09 74.9 11.4 99 54-218 159-259 (472)
235 2gqw_A Ferredoxin reductase; f 97.7 0.00027 9.3E-09 71.9 12.5 95 54-218 145-240 (408)
236 1onf_A GR, grase, glutathione 97.7 2.8E-05 9.6E-10 81.5 5.1 34 54-87 2-35 (500)
237 2vdc_G Glutamate synthase [NAD 97.7 3E-05 1E-09 80.2 5.1 36 53-88 121-156 (456)
238 2r9z_A Glutathione amide reduc 97.7 2.9E-05 1E-09 80.6 5.0 34 53-86 3-36 (463)
239 3f8d_A Thioredoxin reductase ( 97.7 0.00042 1.4E-08 67.5 13.1 97 54-218 154-252 (323)
240 3cgb_A Pyridine nucleotide-dis 97.7 0.00021 7.1E-09 74.5 11.4 99 53-219 185-284 (480)
241 3dgh_A TRXR-1, thioredoxin red 97.6 0.00031 1.1E-08 73.1 12.7 101 55-218 188-290 (483)
242 1ges_A Glutathione reductase; 97.6 2.7E-05 9.2E-10 80.5 4.3 34 53-86 3-36 (450)
243 3ntd_A FAD-dependent pyridine 97.6 0.00036 1.2E-08 74.2 13.0 98 55-219 152-269 (565)
244 3k30_A Histamine dehydrogenase 97.6 4.7E-05 1.6E-09 83.1 5.8 37 51-87 388-424 (690)
245 3dgz_A Thioredoxin reductase 2 97.6 0.00043 1.5E-08 72.2 12.8 103 54-219 185-289 (488)
246 2wpf_A Trypanothione reductase 97.6 0.00022 7.4E-09 74.6 10.6 99 55-219 192-294 (495)
247 1zk7_A HGII, reductase, mercur 97.6 0.00038 1.3E-08 72.2 12.4 96 55-219 177-273 (467)
248 1kdg_A CDH, cellobiose dehydro 97.6 4.1E-05 1.4E-09 81.2 5.0 58 160-217 199-261 (546)
249 1xhc_A NADH oxidase /nitrite r 97.6 0.00027 9.1E-09 70.9 10.7 92 55-219 144-236 (367)
250 3t37_A Probable dehydrogenase; 97.6 4.9E-05 1.7E-09 80.2 5.0 59 158-217 212-271 (526)
251 1m6i_A Programmed cell death p 97.6 0.0005 1.7E-08 71.8 12.7 98 55-218 181-283 (493)
252 2a87_A TRXR, TR, thioredoxin r 97.5 0.00034 1.2E-08 69.0 10.4 96 54-217 155-252 (335)
253 1o94_A Tmadh, trimethylamine d 97.5 8.7E-05 3E-09 81.5 5.9 37 52-88 387-423 (729)
254 1ps9_A 2,4-dienoyl-COA reducta 97.5 0.00014 4.9E-09 79.0 7.6 36 52-87 371-406 (671)
255 3qfa_A Thioredoxin reductase 1 97.5 0.00058 2E-08 71.8 11.7 101 55-218 211-316 (519)
256 1b37_A Protein (polyamine oxid 97.5 0.00011 3.8E-09 76.3 6.0 37 53-89 3-40 (472)
257 3dk9_A Grase, GR, glutathione 97.4 0.0011 3.6E-08 69.0 13.5 103 54-219 187-295 (478)
258 4b1b_A TRXR, thioredoxin reduc 97.4 0.00047 1.6E-08 72.6 10.8 98 54-219 223-321 (542)
259 2z3y_A Lysine-specific histone 97.4 0.00014 4.8E-09 78.9 6.1 38 52-89 105-142 (662)
260 2x8g_A Thioredoxin glutathione 97.4 0.0014 5E-08 70.0 14.0 101 55-219 287-397 (598)
261 3l8k_A Dihydrolipoyl dehydroge 97.4 0.0011 3.8E-08 68.6 12.5 102 54-220 172-275 (466)
262 1ju2_A HydroxynitrIle lyase; f 97.4 6.4E-05 2.2E-09 79.5 2.9 49 169-217 206-261 (536)
263 2xag_A Lysine-specific histone 97.4 0.00018 6.1E-09 79.7 6.5 38 52-89 276-313 (852)
264 3lzw_A Ferredoxin--NADP reduct 97.3 0.00095 3.2E-08 65.3 11.0 95 54-217 154-250 (332)
265 3ics_A Coenzyme A-disulfide re 97.3 0.00097 3.3E-08 71.3 11.8 96 55-219 188-284 (588)
266 1lqt_A FPRA; NADP+ derivative, 97.3 0.00013 4.4E-09 75.5 4.1 34 54-87 3-43 (456)
267 1cjc_A Protein (adrenodoxin re 97.3 0.002 7E-08 66.5 13.0 48 171-218 271-334 (460)
268 3d1c_A Flavin-containing putat 97.3 0.0024 8.2E-08 63.5 13.2 106 55-218 167-273 (369)
269 4a5l_A Thioredoxin reductase; 97.2 0.0023 7.7E-08 62.1 12.0 33 55-87 153-185 (314)
270 1m6i_A Programmed cell death p 97.2 0.00019 6.5E-09 75.0 4.4 37 52-88 9-47 (493)
271 1gte_A Dihydropyrimidine dehyd 97.2 0.00021 7E-09 81.4 4.6 34 54-87 187-221 (1025)
272 1cjc_A Protein (adrenodoxin re 97.2 0.00026 9E-09 73.2 4.8 34 54-87 6-41 (460)
273 1coy_A Cholesterol oxidase; ox 97.2 0.00031 1.1E-08 73.7 5.3 59 160-218 230-294 (507)
274 3gwf_A Cyclohexanone monooxyge 97.1 0.0019 6.6E-08 68.1 11.2 35 54-88 178-212 (540)
275 1lqt_A FPRA; NADP+ derivative, 97.1 0.0014 4.7E-08 67.7 9.7 59 158-217 248-326 (456)
276 1n4w_A CHOD, cholesterol oxida 97.1 0.00027 9.4E-09 74.0 4.5 57 162-218 227-289 (504)
277 3kd9_A Coenzyme A disulfide re 97.1 0.002 6.7E-08 66.3 10.7 96 55-218 149-245 (449)
278 4eqs_A Coenzyme A disulfide re 97.0 0.0033 1.1E-07 64.5 10.9 33 55-87 148-180 (437)
279 3uox_A Otemo; baeyer-villiger 97.0 0.00097 3.3E-08 70.5 7.0 35 54-88 185-219 (545)
280 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00031 1.1E-08 75.8 3.1 34 54-87 56-97 (721)
281 3fbs_A Oxidoreductase; structu 96.9 0.0021 7.1E-08 61.7 8.1 33 54-87 141-173 (297)
282 4g6h_A Rotenone-insensitive NA 96.8 0.0038 1.3E-07 65.2 9.9 55 158-216 274-331 (502)
283 2gag_A Heterotetrameric sarcos 96.8 0.0031 1E-07 71.3 9.3 93 55-218 285-384 (965)
284 1gte_A Dihydropyrimidine dehyd 96.6 0.0072 2.5E-07 68.7 11.1 32 56-87 334-366 (1025)
285 3k30_A Histamine dehydrogenase 96.6 0.0063 2.1E-07 66.2 10.1 97 55-217 524-624 (690)
286 1vg0_A RAB proteins geranylger 96.6 0.0017 5.9E-08 69.2 5.3 37 52-88 6-42 (650)
287 4gcm_A TRXR, thioredoxin reduc 96.5 0.049 1.7E-06 52.6 15.3 33 55-87 146-178 (312)
288 4ap3_A Steroid monooxygenase; 96.5 0.0015 5.3E-08 69.0 4.5 35 54-88 191-225 (549)
289 2vdc_G Glutamate synthase [NAD 96.4 0.0039 1.3E-07 64.3 6.5 34 54-87 264-298 (456)
290 2gv8_A Monooxygenase; FMO, FAD 96.4 0.01 3.4E-07 61.0 9.7 34 54-87 212-246 (447)
291 2xve_A Flavin-containing monoo 96.2 0.015 5.3E-07 59.9 9.8 34 54-87 197-230 (464)
292 1ps9_A 2,4-dienoyl-COA reducta 96.1 0.016 5.6E-07 62.7 9.9 52 160-218 577-629 (671)
293 3fwz_A Inner membrane protein 96.1 0.0088 3E-07 50.7 6.1 36 52-87 5-40 (140)
294 3klj_A NAD(FAD)-dependent dehy 96.0 0.0042 1.4E-07 62.5 4.4 34 55-88 147-180 (385)
295 2g1u_A Hypothetical protein TM 96.0 0.0066 2.3E-07 52.4 5.1 35 54-88 19-53 (155)
296 1lss_A TRK system potassium up 95.8 0.0094 3.2E-07 50.0 5.0 33 55-87 5-37 (140)
297 1id1_A Putative potassium chan 95.5 0.017 5.8E-07 49.6 5.5 33 55-87 4-36 (153)
298 3ic5_A Putative saccharopine d 95.5 0.014 4.7E-07 47.3 4.6 33 55-87 6-39 (118)
299 3llv_A Exopolyphosphatase-rela 95.4 0.015 5.1E-07 49.1 4.9 33 55-87 7-39 (141)
300 1o94_A Tmadh, trimethylamine d 95.3 0.043 1.5E-06 60.0 9.5 33 55-87 529-563 (729)
301 3c85_A Putative glutathione-re 94.6 0.031 1.1E-06 49.5 4.8 34 54-87 39-73 (183)
302 2hmt_A YUAA protein; RCK, KTN, 94.6 0.028 9.6E-07 47.2 4.3 32 56-87 8-39 (144)
303 3l4b_C TRKA K+ channel protien 94.3 0.033 1.1E-06 50.9 4.3 32 56-87 2-33 (218)
304 1f0y_A HCDH, L-3-hydroxyacyl-C 94.3 0.047 1.6E-06 52.7 5.6 33 55-87 16-48 (302)
305 3i83_A 2-dehydropantoate 2-red 94.1 0.048 1.6E-06 53.2 5.2 32 55-86 3-34 (320)
306 3h28_A Sulfide-quinone reducta 94.0 0.11 3.8E-06 52.8 8.0 53 159-217 203-256 (430)
307 4fk1_A Putative thioredoxin re 94.0 0.13 4.3E-06 49.5 8.1 33 55-87 147-180 (304)
308 3ado_A Lambda-crystallin; L-gu 94.0 0.047 1.6E-06 53.0 4.9 33 55-87 7-39 (319)
309 3sx6_A Sulfide-quinone reducta 94.0 0.26 8.9E-06 50.1 10.8 53 160-216 212-268 (437)
310 1w4x_A Phenylacetone monooxyge 93.8 0.055 1.9E-06 56.9 5.4 35 54-88 186-220 (542)
311 1pzg_A LDH, lactate dehydrogen 93.8 0.063 2.2E-06 52.6 5.4 34 54-87 9-43 (331)
312 4g65_A TRK system potassium up 93.5 0.04 1.4E-06 56.7 3.7 60 54-113 3-68 (461)
313 3hn2_A 2-dehydropantoate 2-red 93.5 0.055 1.9E-06 52.5 4.5 32 55-86 3-34 (312)
314 1ks9_A KPA reductase;, 2-dehyd 93.5 0.074 2.5E-06 50.7 5.4 32 56-87 2-33 (291)
315 2raf_A Putative dinucleotide-b 93.4 0.085 2.9E-06 47.9 5.3 35 54-88 19-53 (209)
316 1lld_A L-lactate dehydrogenase 93.4 0.073 2.5E-06 51.7 5.2 34 54-87 7-42 (319)
317 2y0c_A BCEC, UDP-glucose dehyd 93.4 0.07 2.4E-06 55.1 5.2 34 54-87 8-41 (478)
318 4e12_A Diketoreductase; oxidor 93.3 0.085 2.9E-06 50.4 5.5 33 55-87 5-37 (283)
319 2dpo_A L-gulonate 3-dehydrogen 93.3 0.072 2.5E-06 51.8 4.9 33 55-87 7-39 (319)
320 3dfz_A SIRC, precorrin-2 dehyd 93.3 0.097 3.3E-06 47.9 5.4 34 53-86 30-63 (223)
321 4dio_A NAD(P) transhydrogenase 93.3 0.091 3.1E-06 52.6 5.6 34 54-87 190-223 (405)
322 3ghy_A Ketopantoate reductase 93.2 0.083 2.8E-06 51.8 5.2 32 55-86 4-35 (335)
323 3gg2_A Sugar dehydrogenase, UD 93.0 0.087 3E-06 53.9 5.2 33 55-87 3-35 (450)
324 3k96_A Glycerol-3-phosphate de 93.0 0.1 3.5E-06 51.6 5.5 35 53-87 28-62 (356)
325 3eag_A UDP-N-acetylmuramate:L- 92.9 0.16 5.4E-06 49.6 6.7 33 55-87 5-38 (326)
326 3k6j_A Protein F01G10.3, confi 92.9 0.17 5.8E-06 51.7 7.0 33 55-87 55-87 (460)
327 2ew2_A 2-dehydropantoate 2-red 92.9 0.095 3.2E-06 50.6 5.0 33 55-87 4-36 (316)
328 1jw9_B Molybdopterin biosynthe 92.8 0.078 2.7E-06 49.6 4.2 33 55-87 32-65 (249)
329 2x5o_A UDP-N-acetylmuramoylala 92.8 0.078 2.7E-06 54.1 4.5 35 55-89 6-40 (439)
330 2hjr_A Malate dehydrogenase; m 92.8 0.12 4.1E-06 50.5 5.6 33 55-87 15-48 (328)
331 2ewd_A Lactate dehydrogenase,; 92.8 0.1 3.5E-06 50.7 5.1 34 54-87 4-38 (317)
332 3oj0_A Glutr, glutamyl-tRNA re 92.7 0.056 1.9E-06 45.7 2.8 33 55-87 22-54 (144)
333 4a7p_A UDP-glucose dehydrogena 92.7 0.11 3.8E-06 53.0 5.4 35 54-88 8-42 (446)
334 3lk7_A UDP-N-acetylmuramoylala 92.7 0.11 3.8E-06 53.2 5.4 34 54-87 9-42 (451)
335 3g17_A Similar to 2-dehydropan 92.6 0.068 2.3E-06 51.3 3.6 33 55-87 3-35 (294)
336 3g79_A NDP-N-acetyl-D-galactos 92.6 0.11 3.7E-06 53.5 5.1 35 54-88 18-54 (478)
337 1kyq_A Met8P, siroheme biosynt 92.6 0.068 2.3E-06 50.6 3.4 34 54-87 13-46 (274)
338 3vtf_A UDP-glucose 6-dehydroge 92.5 0.13 4.4E-06 52.2 5.5 36 52-87 19-54 (444)
339 3h8l_A NADH oxidase; membrane 92.4 0.36 1.2E-05 48.4 8.9 50 158-217 220-270 (409)
340 1zej_A HBD-9, 3-hydroxyacyl-CO 92.3 0.13 4.4E-06 49.3 5.1 35 52-87 10-44 (293)
341 3l9w_A Glutathione-regulated p 92.2 0.13 4.4E-06 52.0 5.2 35 54-88 4-38 (413)
342 3ego_A Probable 2-dehydropanto 92.2 0.13 4.5E-06 49.7 5.1 32 55-87 3-34 (307)
343 3doj_A AT3G25530, dehydrogenas 92.2 0.14 4.7E-06 49.6 5.2 34 54-87 21-54 (310)
344 3p2y_A Alanine dehydrogenase/p 92.2 0.11 3.7E-06 51.6 4.4 34 54-87 184-217 (381)
345 1z82_A Glycerol-3-phosphate de 92.2 0.14 4.6E-06 50.2 5.2 35 53-87 13-47 (335)
346 1bg6_A N-(1-D-carboxylethyl)-L 92.2 0.13 4.5E-06 50.6 5.2 33 55-87 5-37 (359)
347 2v6b_A L-LDH, L-lactate dehydr 92.1 0.14 4.8E-06 49.4 5.1 32 56-87 2-35 (304)
348 3pid_A UDP-glucose 6-dehydroge 92.0 0.14 4.8E-06 51.9 5.1 34 53-87 35-68 (432)
349 3tl2_A Malate dehydrogenase; c 92.0 0.17 5.9E-06 49.0 5.6 33 54-86 8-41 (315)
350 1t2d_A LDH-P, L-lactate dehydr 92.0 0.18 6.1E-06 49.1 5.7 33 55-87 5-38 (322)
351 1zcj_A Peroxisomal bifunctiona 91.9 0.17 5.9E-06 52.0 5.8 33 55-87 38-70 (463)
352 3qha_A Putative oxidoreductase 91.9 0.14 4.7E-06 49.3 4.8 35 54-88 15-49 (296)
353 3g0o_A 3-hydroxyisobutyrate de 91.7 0.17 5.8E-06 48.7 5.2 34 54-87 7-40 (303)
354 1pjc_A Protein (L-alanine dehy 91.7 0.15 5.1E-06 50.6 4.9 33 55-87 168-200 (361)
355 3hwr_A 2-dehydropantoate 2-red 91.7 0.16 5.4E-06 49.4 4.9 33 53-86 18-50 (318)
356 1mv8_A GMD, GDP-mannose 6-dehy 91.6 0.13 4.5E-06 52.4 4.5 32 56-87 2-33 (436)
357 3pef_A 6-phosphogluconate dehy 91.6 0.16 5.5E-06 48.5 4.8 33 55-87 2-34 (287)
358 4b63_A L-ornithine N5 monooxyg 91.6 0.18 6.1E-06 52.4 5.5 34 55-88 247-282 (501)
359 1l7d_A Nicotinamide nucleotide 91.5 0.2 6.7E-06 50.2 5.6 34 54-87 172-205 (384)
360 1guz_A Malate dehydrogenase; o 91.5 0.19 6.3E-06 48.7 5.2 32 56-87 2-35 (310)
361 3dtt_A NADP oxidoreductase; st 91.5 0.19 6.6E-06 46.7 5.1 36 52-87 17-52 (245)
362 3gvi_A Malate dehydrogenase; N 91.4 0.22 7.4E-06 48.5 5.6 34 54-87 7-41 (324)
363 1x13_A NAD(P) transhydrogenase 91.3 0.18 6.3E-06 50.6 5.1 34 54-87 172-205 (401)
364 4gx0_A TRKA domain protein; me 91.3 0.21 7E-06 52.8 5.8 57 55-112 349-407 (565)
365 1y6j_A L-lactate dehydrogenase 91.2 0.21 7.3E-06 48.5 5.3 34 54-87 7-42 (318)
366 1ur5_A Malate dehydrogenase; o 91.2 0.22 7.7E-06 48.1 5.4 33 55-87 3-36 (309)
367 2vns_A Metalloreductase steap3 91.1 0.22 7.5E-06 45.3 5.0 34 54-87 28-61 (215)
368 1vpd_A Tartronate semialdehyde 91.1 0.17 5.8E-06 48.5 4.5 33 55-87 6-38 (299)
369 4dna_A Probable glutathione re 91.0 0.19 6.6E-06 51.5 5.1 35 54-88 170-204 (463)
370 4dll_A 2-hydroxy-3-oxopropiona 91.0 0.21 7.1E-06 48.6 5.0 35 53-87 30-64 (320)
371 3pqe_A L-LDH, L-lactate dehydr 90.9 0.21 7E-06 48.7 4.9 33 54-86 5-39 (326)
372 3phh_A Shikimate dehydrogenase 90.9 0.24 8.4E-06 46.7 5.2 34 54-87 118-151 (269)
373 2qyt_A 2-dehydropantoate 2-red 90.8 0.14 4.8E-06 49.4 3.6 31 55-85 9-45 (317)
374 3rui_A Ubiquitin-like modifier 90.8 0.24 8.3E-06 48.3 5.1 34 54-87 34-68 (340)
375 3p7m_A Malate dehydrogenase; p 90.7 0.29 9.8E-06 47.6 5.7 34 54-87 5-39 (321)
376 1evy_A Glycerol-3-phosphate de 90.7 0.18 6.3E-06 49.9 4.4 32 56-87 17-48 (366)
377 1txg_A Glycerol-3-phosphate de 90.7 0.17 5.9E-06 49.3 4.2 30 56-85 2-31 (335)
378 3dfu_A Uncharacterized protein 90.7 0.085 2.9E-06 48.6 1.8 33 53-85 5-37 (232)
379 1dlj_A UDP-glucose dehydrogena 90.6 0.2 7E-06 50.4 4.7 31 56-87 2-32 (402)
380 3h8v_A Ubiquitin-like modifier 90.6 0.17 5.9E-06 48.3 3.9 35 53-87 35-70 (292)
381 2a9f_A Putative malic enzyme ( 90.6 0.21 7E-06 49.5 4.5 34 53-86 187-221 (398)
382 2aef_A Calcium-gated potassium 90.5 0.12 4.1E-06 47.7 2.7 33 54-87 9-41 (234)
383 2uyy_A N-PAC protein; long-cha 90.5 0.29 1E-05 47.3 5.6 34 54-87 30-63 (316)
384 3l6d_A Putative oxidoreductase 90.4 0.32 1.1E-05 46.9 5.8 34 54-87 9-42 (306)
385 3ggo_A Prephenate dehydrogenas 90.4 0.32 1.1E-05 47.1 5.7 34 54-87 33-68 (314)
386 1jay_A Coenzyme F420H2:NADP+ o 90.4 0.27 9.3E-06 44.3 4.9 32 56-87 2-34 (212)
387 1nyt_A Shikimate 5-dehydrogena 90.3 0.3 1E-05 46.2 5.3 33 55-87 120-152 (271)
388 4ezb_A Uncharacterized conserv 90.3 0.27 9.1E-06 47.7 5.1 34 54-87 24-58 (317)
389 2eez_A Alanine dehydrogenase; 90.2 0.28 9.6E-06 48.7 5.3 33 55-87 167-199 (369)
390 3mog_A Probable 3-hydroxybutyr 90.1 0.29 1E-05 50.4 5.4 33 55-87 6-38 (483)
391 3qsg_A NAD-binding phosphogluc 90.0 0.23 7.8E-06 48.1 4.3 33 54-86 24-57 (312)
392 1zud_1 Adenylyltransferase THI 89.9 0.27 9.2E-06 46.0 4.6 34 54-87 28-62 (251)
393 2f1k_A Prephenate dehydrogenas 89.9 0.31 1E-05 46.2 5.0 32 56-87 2-33 (279)
394 1oju_A MDH, malate dehydrogena 89.9 0.25 8.4E-06 47.4 4.3 32 56-87 2-35 (294)
395 1vl6_A Malate oxidoreductase; 89.8 0.26 8.9E-06 48.7 4.5 34 53-86 191-225 (388)
396 4huj_A Uncharacterized protein 89.8 0.16 5.3E-06 46.5 2.8 33 55-87 24-57 (220)
397 1a5z_A L-lactate dehydrogenase 89.8 0.24 8.4E-06 48.1 4.4 32 56-87 2-35 (319)
398 2egg_A AROE, shikimate 5-dehyd 89.7 0.34 1.2E-05 46.5 5.3 33 55-87 142-175 (297)
399 3pdu_A 3-hydroxyisobutyrate de 89.7 0.19 6.6E-06 47.9 3.5 32 56-87 3-34 (287)
400 4e21_A 6-phosphogluconate dehy 89.6 0.33 1.1E-05 48.0 5.2 35 53-87 21-55 (358)
401 3ius_A Uncharacterized conserv 89.6 0.3 1E-05 46.2 4.7 33 55-87 6-38 (286)
402 4ffl_A PYLC; amino acid, biosy 89.4 0.39 1.3E-05 47.4 5.6 36 56-91 3-38 (363)
403 2vhw_A Alanine dehydrogenase; 89.4 0.36 1.2E-05 48.1 5.3 34 54-87 168-201 (377)
404 2p4q_A 6-phosphogluconate dehy 89.4 0.37 1.3E-05 49.9 5.5 34 54-87 10-43 (497)
405 2h78_A Hibadh, 3-hydroxyisobut 89.3 0.3 1E-05 46.9 4.5 33 55-87 4-36 (302)
406 2zyd_A 6-phosphogluconate dehy 89.2 0.34 1.2E-05 49.9 5.1 35 53-87 14-48 (480)
407 3e8x_A Putative NAD-dependent 89.2 0.35 1.2E-05 44.4 4.7 35 53-87 20-55 (236)
408 2pv7_A T-protein [includes: ch 89.2 0.36 1.2E-05 46.3 5.0 33 55-87 22-55 (298)
409 2rcy_A Pyrroline carboxylate r 89.2 0.33 1.1E-05 45.4 4.7 34 55-88 5-42 (262)
410 3nep_X Malate dehydrogenase; h 89.1 0.33 1.1E-05 47.0 4.6 33 55-87 1-35 (314)
411 4gwg_A 6-phosphogluconate dehy 89.0 0.4 1.4E-05 49.3 5.4 34 54-87 4-37 (484)
412 3gpi_A NAD-dependent epimerase 88.9 0.48 1.7E-05 44.8 5.7 34 55-88 4-37 (286)
413 3o0h_A Glutathione reductase; 88.9 0.35 1.2E-05 49.8 5.0 35 54-88 191-225 (484)
414 3vku_A L-LDH, L-lactate dehydr 88.9 0.37 1.3E-05 46.9 4.8 35 52-86 7-43 (326)
415 1ldn_A L-lactate dehydrogenase 88.8 0.41 1.4E-05 46.4 5.1 34 54-87 6-41 (316)
416 1yqg_A Pyrroline-5-carboxylate 88.8 0.33 1.1E-05 45.4 4.4 32 56-87 2-34 (263)
417 3u62_A Shikimate dehydrogenase 88.8 0.44 1.5E-05 44.5 5.1 32 56-87 110-142 (253)
418 1n4w_A CHOD, cholesterol oxida 88.7 0.65 2.2E-05 48.2 6.9 35 53-87 4-38 (504)
419 2gf2_A Hibadh, 3-hydroxyisobut 88.6 0.37 1.3E-05 46.0 4.7 32 56-87 2-33 (296)
420 3h5n_A MCCB protein; ubiquitin 88.6 0.33 1.1E-05 47.8 4.4 34 54-87 118-152 (353)
421 3ond_A Adenosylhomocysteinase; 88.6 0.39 1.3E-05 49.1 5.0 34 54-87 265-298 (488)
422 2pgd_A 6-phosphogluconate dehy 88.6 0.42 1.4E-05 49.3 5.3 33 55-87 3-35 (482)
423 2q3e_A UDP-glucose 6-dehydroge 88.6 0.31 1.1E-05 50.0 4.3 33 55-87 6-40 (467)
424 1hyh_A L-hicdh, L-2-hydroxyiso 88.6 0.34 1.1E-05 46.8 4.3 32 56-87 3-36 (309)
425 2izz_A Pyrroline-5-carboxylate 88.5 0.43 1.5E-05 46.3 5.0 34 54-87 22-59 (322)
426 3don_A Shikimate dehydrogenase 88.5 0.37 1.3E-05 45.7 4.4 33 55-87 118-151 (277)
427 1p77_A Shikimate 5-dehydrogena 88.5 0.34 1.2E-05 45.8 4.2 33 55-87 120-152 (272)
428 3c7a_A Octopine dehydrogenase; 88.4 0.3 1E-05 49.1 4.0 31 55-85 3-34 (404)
429 3ldh_A Lactate dehydrogenase; 88.4 0.41 1.4E-05 46.5 4.8 35 53-87 20-56 (330)
430 2o3j_A UDP-glucose 6-dehydroge 88.4 0.31 1.1E-05 50.2 4.2 33 55-87 10-44 (481)
431 3ew7_A LMO0794 protein; Q8Y8U8 88.4 0.48 1.6E-05 42.6 5.0 32 56-87 2-34 (221)
432 3d0o_A L-LDH 1, L-lactate dehy 88.4 0.41 1.4E-05 46.4 4.7 34 53-86 5-40 (317)
433 1x0v_A GPD-C, GPDH-C, glycerol 88.4 0.23 7.9E-06 48.8 3.1 34 55-88 9-49 (354)
434 3cky_A 2-hydroxymethyl glutara 88.4 0.4 1.4E-05 45.8 4.7 33 55-87 5-37 (301)
435 4a9w_A Monooxygenase; baeyer-v 88.3 0.38 1.3E-05 46.7 4.6 33 54-87 163-195 (357)
436 3c24_A Putative oxidoreductase 88.3 0.58 2E-05 44.5 5.7 33 55-87 12-45 (286)
437 3tri_A Pyrroline-5-carboxylate 88.3 0.53 1.8E-05 44.7 5.4 33 55-87 4-39 (280)
438 3zwc_A Peroxisomal bifunctiona 88.3 0.69 2.4E-05 50.2 6.9 34 54-87 316-349 (742)
439 3jyo_A Quinate/shikimate dehyd 88.2 0.53 1.8E-05 44.8 5.4 34 54-87 127-161 (283)
440 3ktd_A Prephenate dehydrogenas 88.2 0.53 1.8E-05 46.1 5.5 33 55-87 9-41 (341)
441 2g5c_A Prephenate dehydrogenas 88.2 0.46 1.6E-05 44.9 5.0 32 56-87 3-36 (281)
442 2wtb_A MFP2, fatty acid multif 88.2 0.51 1.7E-05 51.3 5.8 33 55-87 313-345 (725)
443 4gsl_A Ubiquitin-like modifier 88.1 0.46 1.6E-05 49.9 5.1 34 54-87 326-360 (615)
444 3tnl_A Shikimate dehydrogenase 88.1 0.52 1.8E-05 45.5 5.3 34 54-87 154-188 (315)
445 1yj8_A Glycerol-3-phosphate de 88.1 0.32 1.1E-05 48.4 3.8 34 55-88 22-62 (375)
446 2cvz_A Dehydrogenase, 3-hydrox 87.9 0.42 1.4E-05 45.4 4.5 31 56-87 3-33 (289)
447 3h2s_A Putative NADH-flavin re 87.9 0.51 1.8E-05 42.6 4.9 32 56-87 2-34 (224)
448 3gt0_A Pyrroline-5-carboxylate 87.9 0.57 1.9E-05 43.4 5.3 33 55-87 3-39 (247)
449 2hk9_A Shikimate dehydrogenase 87.8 0.4 1.4E-05 45.4 4.2 33 55-87 130-162 (275)
450 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.8 0.47 1.6E-05 48.9 5.0 33 55-87 2-34 (478)
451 4gbj_A 6-phosphogluconate dehy 87.8 0.36 1.2E-05 46.3 3.9 34 55-88 6-39 (297)
452 3vh1_A Ubiquitin-like modifier 87.7 0.51 1.7E-05 49.5 5.1 34 54-87 327-361 (598)
453 3ojo_A CAP5O; rossmann fold, c 87.6 0.41 1.4E-05 48.4 4.4 33 55-87 12-44 (431)
454 1pjq_A CYSG, siroheme synthase 87.5 0.51 1.7E-05 48.3 5.1 33 54-86 12-44 (457)
455 3d4o_A Dipicolinate synthase s 87.5 0.59 2E-05 44.7 5.3 33 55-87 156-188 (293)
456 4aj2_A L-lactate dehydrogenase 87.5 0.63 2.2E-05 45.3 5.5 35 52-86 17-53 (331)
457 2rir_A Dipicolinate synthase, 87.4 0.6 2.1E-05 44.8 5.3 34 54-87 157-190 (300)
458 1nvt_A Shikimate 5'-dehydrogen 87.4 0.49 1.7E-05 45.1 4.5 31 55-86 129-159 (287)
459 3pwz_A Shikimate dehydrogenase 87.3 0.65 2.2E-05 43.9 5.3 34 54-87 120-154 (272)
460 1np3_A Ketol-acid reductoisome 87.3 0.65 2.2E-05 45.4 5.5 33 55-87 17-49 (338)
461 2i6t_A Ubiquitin-conjugating e 87.3 0.48 1.7E-05 45.5 4.5 33 55-87 15-49 (303)
462 3fbt_A Chorismate mutase and s 87.1 0.55 1.9E-05 44.6 4.7 34 54-87 122-156 (282)
463 2ahr_A Putative pyrroline carb 87.1 0.61 2.1E-05 43.5 5.0 33 55-87 4-36 (259)
464 2zqz_A L-LDH, L-lactate dehydr 87.0 0.58 2E-05 45.5 4.9 35 52-86 7-43 (326)
465 3o8q_A Shikimate 5-dehydrogena 87.0 0.68 2.3E-05 44.0 5.2 34 54-87 126-160 (281)
466 2iz1_A 6-phosphogluconate dehy 86.9 0.63 2.2E-05 47.8 5.4 33 55-87 6-38 (474)
467 1coy_A Cholesterol oxidase; ox 86.9 0.94 3.2E-05 47.0 6.8 36 52-87 9-44 (507)
468 4b4o_A Epimerase family protei 86.8 0.7 2.4E-05 44.0 5.4 34 55-88 1-35 (298)
469 2d5c_A AROE, shikimate 5-dehyd 86.8 0.63 2.2E-05 43.6 5.0 32 56-87 118-149 (263)
470 1hdo_A Biliverdin IX beta redu 86.8 0.72 2.5E-05 40.8 5.2 34 55-88 4-38 (206)
471 3ce6_A Adenosylhomocysteinase; 86.8 0.57 2E-05 48.2 4.9 34 54-87 274-307 (494)
472 1wdk_A Fatty oxidation complex 86.8 0.57 1.9E-05 50.8 5.2 33 55-87 315-347 (715)
473 3t4e_A Quinate/shikimate dehyd 86.8 0.69 2.4E-05 44.6 5.2 34 54-87 148-182 (312)
474 3gvp_A Adenosylhomocysteinase 86.7 0.61 2.1E-05 46.8 4.9 34 54-87 220-253 (435)
475 3d1l_A Putative NADP oxidoredu 86.6 0.55 1.9E-05 44.0 4.4 33 55-87 11-44 (266)
476 1ez4_A Lactate dehydrogenase; 86.5 0.56 1.9E-05 45.4 4.5 33 54-86 5-39 (318)
477 1edz_A 5,10-methylenetetrahydr 86.2 0.67 2.3E-05 44.7 4.8 34 53-86 176-210 (320)
478 1i36_A Conserved hypothetical 86.0 0.59 2E-05 43.7 4.3 30 56-85 2-31 (264)
479 2we8_A Xanthine dehydrogenase; 85.8 0.86 2.9E-05 45.3 5.5 36 53-88 203-238 (386)
480 1npy_A Hypothetical shikimate 85.7 0.65 2.2E-05 43.9 4.4 33 55-87 120-153 (271)
481 4id9_A Short-chain dehydrogena 85.6 0.79 2.7E-05 44.5 5.2 37 52-88 17-54 (347)
482 3two_A Mannitol dehydrogenase; 85.6 0.78 2.7E-05 44.9 5.1 33 55-87 178-210 (348)
483 2pzm_A Putative nucleotide sug 85.6 0.98 3.3E-05 43.7 5.8 34 54-87 20-54 (330)
484 1tt5_B Ubiquitin-activating en 85.5 0.72 2.5E-05 46.7 4.9 34 54-87 40-74 (434)
485 3orq_A N5-carboxyaminoimidazol 85.5 1.4 4.7E-05 43.8 6.9 37 54-90 12-48 (377)
486 1gpj_A Glutamyl-tRNA reductase 85.5 0.6 2.1E-05 46.9 4.3 34 54-87 167-201 (404)
487 3q2o_A Phosphoribosylaminoimid 85.5 1.3 4.3E-05 44.2 6.6 36 54-89 14-49 (389)
488 3fi9_A Malate dehydrogenase; s 85.5 0.87 3E-05 44.6 5.3 33 54-86 8-43 (343)
489 2d4a_B Malate dehydrogenase; a 85.3 0.71 2.4E-05 44.5 4.5 32 56-87 1-33 (308)
490 1y8q_A Ubiquitin-like 1 activa 85.3 0.68 2.3E-05 45.4 4.4 34 54-87 36-70 (346)
491 1lu9_A Methylene tetrahydromet 85.1 0.82 2.8E-05 43.4 4.9 32 55-86 120-152 (287)
492 1mld_A Malate dehydrogenase; o 84.9 0.74 2.5E-05 44.5 4.5 32 56-87 2-36 (314)
493 1leh_A Leucine dehydrogenase; 84.1 1.1 3.7E-05 44.2 5.3 33 54-86 173-205 (364)
494 3uko_A Alcohol dehydrogenase c 84.1 0.82 2.8E-05 45.4 4.5 33 55-87 195-228 (378)
495 2bcg_G Secretory pathway GDP d 84.0 1.7 5.7E-05 44.3 6.9 39 53-91 10-48 (453)
496 1yb4_A Tartronic semialdehyde 83.8 0.65 2.2E-05 44.2 3.5 32 55-87 4-35 (295)
497 1piw_A Hypothetical zinc-type 83.8 0.84 2.9E-05 44.9 4.4 33 55-87 181-213 (360)
498 2qrj_A Saccharopine dehydrogen 83.8 0.84 2.9E-05 45.3 4.3 35 53-87 213-251 (394)
499 1b8p_A Protein (malate dehydro 83.7 0.81 2.8E-05 44.5 4.2 33 54-86 5-45 (329)
500 2dbq_A Glyoxylate reductase; D 83.6 1.4 4.9E-05 42.9 5.9 34 54-87 150-183 (334)
No 1
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=2.5e-45 Score=387.99 Aligned_cols=391 Identities=18% Similarity=0.192 Sum_probs=279.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++++||+||||||+||++|+.|+++|++|+|+||.+......++..++++++++|+++|+.+.+... ...... . ..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~~-~-~~ 84 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEV--ETSTQG-H-FG 84 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSC--CBCCEE-E-ET
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhc--cccccc-c-cc
Confidence 5678999999999999999999999999999999987777788899999999999999999877653 111111 1 11
Q ss_pred CccccccCCCcCCC-CCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFH-ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
+.. +.+. ... ..+.++.++|..+++.|.+.+.+. ++++++++ |++++++++.++ |++.+.+| ..+++||+|
T Consensus 85 ~~~--~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~v 157 (500)
T 2qa1_A 85 GLP--IDFG--VLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVT-VEVRGPEG-KHTLRAAYL 157 (500)
T ss_dssp TEE--EEGG--GSTTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEETTEEE-EEEEETTE-EEEEEESEE
T ss_pred cee--cccc--cCCCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEcCCeEE-EEEEcCCC-CEEEEeCEE
Confidence 111 1111 111 123457889999999999999987 79999987 999999888654 55555555 456889999
Q ss_pred EEecCCcchhhhhhcCCCCCCcccceeeEEeccCCCC-CCceEEEecCCCcEEEEecCCCeEEEEEEeCCCC----CCCC
Q 009994 210 IVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK----VPSI 284 (520)
Q Consensus 210 V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~ 284 (520)
|+|||.+|.||+.++++..+......++... ...+. +....+++.++++++++|.+++.+++.+..+... ....
T Consensus 158 VgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~ 236 (500)
T 2qa1_A 158 VGCDGGRSSVRKAAGFDFPGTAATMEMYLAD-IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPP 236 (500)
T ss_dssp EECCCTTCHHHHHTTCCCCEECCCCEEEEEE-EESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CC
T ss_pred EECCCcchHHHHHcCCCcCCCccceEEEEEE-EEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCC
Confidence 9999999999999998765544444444332 12221 2224455677788999999988777776653221 1234
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHH
Q 009994 285 SNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 364 (520)
Q Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~L 364 (520)
+.+++.+.+++.+.+.++. .+......|+.....+.+|+.|||+|+|||||.++|++|||||+||+||.+|
T Consensus 237 ~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~L 307 (500)
T 2qa1_A 237 SWHEVADAWKRLTGDDIAH---------AEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNL 307 (500)
T ss_dssp CHHHHHHHHHHHHSCCCTT---------SEEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCCCc---------cceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHH
Confidence 5667777777665533221 0111223566666678899999999999999999999999999999999999
Q ss_pred HHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHHHH--------------hc
Q 009994 365 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYL--------------SL 430 (520)
Q Consensus 365 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~--------------~~ 430 (520)
+|+|+.+. ++.+.+.+|++|+++|+|++..++..++.+.+++.. ++....+|+.....+ ..
T Consensus 308 a~~La~~~---~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~ 382 (500)
T 2qa1_A 308 GWKLGAVV---NGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS--GPEVQPLRDVLTELIQYGEVARHLAGMVSGL 382 (500)
T ss_dssp HHHHHHHH---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CGGGHHHHHHHHHHHTSHHHHHHHHHHHHST
T ss_pred HHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHhhhhccC
Confidence 99998754 223356899999999999999999999888888874 333445565443322 12
Q ss_pred CCCCchhHHHhhhcCCCCchhHHHHHHH---------HHHHHH-hhhccCCCC
Q 009994 431 GGVFSTGPVALLSGLNPRPLSLVLHFFA---------VAIYGV-GRLLLPFPS 473 (520)
Q Consensus 431 g~~~~~~~~~l~~~~~~~P~~~~~h~~~---------~~l~~~-~~~~~~~~~ 473 (520)
+..|..++ +..+.||.|+||+|+ .|+++. .|+|+.++.
T Consensus 383 ~~~Y~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 430 (500)
T 2qa1_A 383 EITYDVGT-----GSHPLLGKRMPALELTTATRETSSTELLHTARGVLLDLAD 430 (500)
T ss_dssp TCCCCCCC-----CSCTTTTSBCCCCEEECSSCEEEHHHHTTTCCEEEEETTC
T ss_pred CCccCCCC-----CcCCcCCCCCCCCeeecCCCcEeHHHHhCCCeEEEEEeCC
Confidence 33343321 225678999999864 778844 588887654
No 2
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=5.9e-47 Score=405.05 Aligned_cols=407 Identities=20% Similarity=0.186 Sum_probs=289.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceece--EE--
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLG--YA-- 127 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~--~~-- 127 (520)
+.++||+||||||+||++|+.|+++|++|+|+||++.....+++..++++++++|+++|+.+.+.......... +.
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 35689999999999999999999999999999999887778889999999999999999999887754432221 11
Q ss_pred EEE--CCcccc-c--cCCC--c--CCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC----eEEEEE
Q 009994 128 LFK--DGKSTR-L--SYPL--E--KFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG----TIKGVQ 193 (520)
Q Consensus 128 ~~~--~~~~~~-~--~~~~--~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~----~v~gv~ 193 (520)
... .+.... . .++. . ..........++|..|++.|++.+++. |+++++++ |++++++++ .+. ++
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~~~v~-v~ 160 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLLSFRQHDDDAGAGVT-AR 160 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEECGGGCSEEE-EE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEECCCCccccEE-EE
Confidence 111 121110 0 1110 0 000122356789999999999999998 89999997 999998876 544 55
Q ss_pred EEeCCCcEEEEecCeEEEecCCcchhhhhhcCCCCCCcc--cceeeEEeccCCCC----CCce-EEEecCCCcEEEEecC
Q 009994 194 YKTKDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPS--CFVGLVLENCQLPF----ANHG-HVILADPSPILFYPIS 266 (520)
Q Consensus 194 v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~--~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~p~~ 266 (520)
+.+.++ ..+++||+||+|||.+|.+|+.++++...... .+..+.+. .+++. .... .++..+.++.+++|+.
T Consensus 161 ~~~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~p~~ 238 (535)
T 3ihg_A 161 LAGPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFD-ADLSGIMEPGTTGWYYLHHPEFKGTFGPTD 238 (535)
T ss_dssp EEETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEE-CCGGGTSCTTCCEEEEEECSSCEEEEEECS
T ss_pred EEcCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEe-ccChhhccCCceEEEEEECCCceEEEEEec
Confidence 555544 45688999999999999999999886544332 22333332 23332 1222 3334566677888998
Q ss_pred C-CeEEEEEEeCCC---CCCCCCchHHHHHHHHhcCC-CCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEcc
Q 009994 267 S-TEVRCLVDVPGQ---KVPSISNGEMANYLKAMVAP-QVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGD 341 (520)
Q Consensus 267 ~-~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGD 341 (520)
+ +.+.+.+..+.+ ..+..+.+++.+.+++.+.. ..+.++ .....|+.....+.+|.+|||+|+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 239 RPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPEL----------VDIQGWEMAARIAERWREGRVFLAGD 308 (535)
T ss_dssp STTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEE----------EEEEEEEEEEEEESCSEETTEEECTT
T ss_pred CCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeE----------EEeeEeeeeEEEECccccCCEEEEec
Confidence 7 545555544432 22345667777777776552 222111 23455666667788999999999999
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHH
Q 009994 342 AFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMR 421 (520)
Q Consensus 342 AAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr 421 (520)
|||.++|++|||+|+||+||.+|+|+|+.+. ++.+.+.+|++|+++|+|++..++..|..+++.+... .......+
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l---~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~-~~~~~~~~ 384 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVL---QGQAGAGLLDTYEDERKVAAELVVAEALAIYAQRMAP-HMAEVWDK 384 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHH---TTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG-GGTTTSCC
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHh---cCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc-ccCccccc
Confidence 9999999999999999999999999998763 2223457899999999999999999999888776433 11100012
Q ss_pred HHHHHHHhcCCCCchhHHHhhh----------cCCCCchhHHHHHHH---------HHHHHHhhhccCCCCHHH
Q 009994 422 QACFDYLSLGGVFSTGPVALLS----------GLNPRPLSLVLHFFA---------VAIYGVGRLLLPFPSPKR 476 (520)
Q Consensus 422 ~~~~~~~~~g~~~~~~~~~l~~----------~~~~~P~~~~~h~~~---------~~l~~~~~~~~~~~~~~~ 476 (520)
......+..|++|.++++...+ ...++||.|+||.|+ +|++|.+|+|+.++....
T Consensus 385 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~pG~r~p~~~l~~~~~~~~~~dl~g~~f~ll~~~~~~~ 458 (535)
T 3ihg_A 385 SVGYPETLLGFRYRSSAVLATDDDPARVENPLTPSGRPGFRGPHVLVSRHGERLSTVDLFGDGWTLLAGELGAD 458 (535)
T ss_dssp CCCHHHHHTSBCCCSTTCCCSCCCCCSBCCTTSCCCCTTSBCCCCEEEETTEEEEGGGGCSSSEEEEECTTCHH
T ss_pred ccccceeeeCcccCCCceecCCCCCCcccccCCCCCCCCCcCCCceeecCCceeeHHHhcCCceEEEecCCccH
Confidence 2333467889999988775332 246899999999986 899999999998775443
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.3e-44 Score=382.43 Aligned_cols=391 Identities=18% Similarity=0.161 Sum_probs=279.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++++||+||||||+||++|+.|+++|++|+|+||.+......++..++++++++|+++|+.+.+... ....... ..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~~~~--~~ 85 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV--ETSTQGH--FG 85 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC--CEESEEE--ET
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc--cccccce--ec
Confidence 5678999999999999999999999999999999987777788999999999999999999887654 1221111 11
Q ss_pred CccccccCCCcCC-CCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKF-HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
+.. +.+. .. ...+.++.++|..+++.|.+.+.+. ++++++++ |++++++++.++ |++.+.+| +.+++||+|
T Consensus 86 ~~~--~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~v 158 (499)
T 2qa2_A 86 GRP--VDFG--VLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVV-VEVEGPDG-PRSLTTRYV 158 (499)
T ss_dssp TEE--EEGG--GSTTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEECSSCEE-EEEECSSC-EEEEEEEEE
T ss_pred cee--cccc--cCCCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCC-cEEEEeCEE
Confidence 111 1111 11 1223457899999999999999987 79999987 999998887654 55555445 456889999
Q ss_pred EEecCCcchhhhhhcCCCCCCcccceeeEEeccCCCC-CCceEEEecCCCcEEEEecCCCeEEEEEEeCCCC----CCCC
Q 009994 210 IVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK----VPSI 284 (520)
Q Consensus 210 V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~ 284 (520)
|+|||.+|.||+.++++..+......++... ...+. +....+++.++++++++|++++.+++.+..+... ....
T Consensus 159 VgADG~~S~VR~~lg~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~ 237 (499)
T 2qa2_A 159 VGCDGGRSTVRKAAGFDFPGTSASREMFLAD-IRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPP 237 (499)
T ss_dssp EECCCTTCHHHHHTTCCCCEECCCCCEEEEE-EESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSC
T ss_pred EEccCcccHHHHHcCCCCCCCCCccEEEEEE-EEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCC
Confidence 9999999999999998765544433444332 11221 2223456677788999999988777777653221 1234
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHH
Q 009994 285 SNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 364 (520)
Q Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~L 364 (520)
+.+++.+.+++.+.+.++. .+......|+.....+.+|+.|||+|+|||||.++|++|||||+||+||.+|
T Consensus 238 ~~~~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~L 308 (499)
T 2qa2_A 238 PYQEVAAAWQRLTGQDISH---------GEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNL 308 (499)
T ss_dssp CHHHHHHHHHHHHSCCCTT---------CEEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCCCc---------cceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHH
Confidence 5677777777665533221 0111223566666678899999999999999999999999999999999999
Q ss_pred HHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHHHH--------------hc
Q 009994 365 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYL--------------SL 430 (520)
Q Consensus 365 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~--------------~~ 430 (520)
+|+|+.+. .+.+.+.+|++|+++|+|++..++..++.+..++.. ++....+|+.....+ ..
T Consensus 309 a~~La~~l---~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~ 383 (499)
T 2qa2_A 309 GWKLAAVV---SGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS--GDEMQPLRDVLSELIRYDEVSRHLAGMVSGL 383 (499)
T ss_dssp HHHHHHHH---TTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CGGGHHHHHHHHHHHTSSHHHHHHHHHHHTT
T ss_pred HHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHHHHHhCC
Confidence 99998754 122346799999999999999999999888888874 344455666544332 12
Q ss_pred CCCCchhHHHhhhcCCCCchhHHHHHHH---------HHHHHH-hhhccCCCC
Q 009994 431 GGVFSTGPVALLSGLNPRPLSLVLHFFA---------VAIYGV-GRLLLPFPS 473 (520)
Q Consensus 431 g~~~~~~~~~l~~~~~~~P~~~~~h~~~---------~~l~~~-~~~~~~~~~ 473 (520)
+..|..++ +..+.||.|+||+|+ .|+++. .|+|+.++.
T Consensus 384 ~~~Y~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 431 (499)
T 2qa2_A 384 DIRYEVDG-----GDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIAD 431 (499)
T ss_dssp TCCCCCCS-----CSCTTTTSBCCCCEEECSSSEEETTGGGTTCSEEEEECSC
T ss_pred CCccCCCC-----CCCCCCCCCCCCCeeecCCCceeHHHHhcCCeEEEEEecC
Confidence 33343321 124678999999875 667743 588877654
No 4
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.5e-44 Score=386.73 Aligned_cols=400 Identities=18% Similarity=0.148 Sum_probs=271.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceec--eEEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVL--GYALF 129 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~--~~~~~ 129 (520)
+.++||+||||||+||++|+.|+++|++|+|+||.+......++..++++++++|+++|+.+.+.+....... ...+.
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEe
Confidence 3468999999999999999999999999999999987777788899999999999999999888764332211 11222
Q ss_pred E--CCcc-ccccCCCc----CC-CCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCC
Q 009994 130 K--DGKS-TRLSYPLE----KF-HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDG 199 (520)
Q Consensus 130 ~--~~~~-~~~~~~~~----~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g 199 (520)
. .+.. ....++.. .. .....++.++|..+++.|.+.+.+. +++++ |+++++++++++ +++.+ .+|
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~-v~~~~~~~G 178 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVR-ATITDLRTG 178 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEE-EEEEETTTC
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEE-EEEEECCCC
Confidence 1 1221 11222211 00 1122457789999999999999875 77887 999998887655 55554 347
Q ss_pred cEEEEecCeEEEecCCcchhhhhhcCCCCCCccccee--eEEeccCCC-----CCCceEEEecCC-CcEEEEecCCCeEE
Q 009994 200 QELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVG--LVLENCQLP-----FANHGHVILADP-SPILFYPISSTEVR 271 (520)
Q Consensus 200 ~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~ 271 (520)
+..+++||+||+|||.+|.+|+.++++..+....... ..+....++ .+...++++.++ ++++++|++++. .
T Consensus 179 ~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~ 257 (549)
T 2r0c_A 179 ATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-L 257 (549)
T ss_dssp CEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-E
T ss_pred CEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-E
Confidence 6567889999999999999999998876554332222 222211111 112233444555 578899997643 3
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCC
Q 009994 272 CLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTG 351 (520)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G 351 (520)
|.+.++.+... .+.+++.+.+++.+.+.++.++ .....|+.....+++|..|||+|+|||||.++|++|
T Consensus 258 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~G 326 (549)
T 2r0c_A 258 YRLTVGVDDAS-KSTMDSFELVRRAVAFDTEIEV----------LSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGG 326 (549)
T ss_dssp EEEEEECSTTC-CSCCCHHHHHHHHBCSCCCCEE----------EEEEEEEECCEECSCSEETTEEECGGGTEECCCGGG
T ss_pred EEEEecCCCCC-CCHHHHHHHHHHHhCCCCceeE----------EEEecchhHhhhHHhhcCCcEEEEccccccCCCccC
Confidence 44433322212 5667788888887654332111 123456666677889999999999999999999999
Q ss_pred chhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCC--------ChhHHHHHHHH
Q 009994 352 GGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSS--------PDQARKEMRQA 423 (520)
Q Consensus 352 ~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~lr~~ 423 (520)
||||+||+||.+|+|+|+.+. ++.+.+.+|++|+.+|+|++..++..+..+.+++... +++....+|+.
T Consensus 327 qG~n~gi~DA~~La~~La~~l---~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 403 (549)
T 2r0c_A 327 FGMNTGIGSAADLGWKLAATL---RGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAA 403 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HTCSCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHH
Confidence 999999999999999998753 1122356899999999999999999999888877541 24556778887
Q ss_pred HHHHHhc--------------CCCCchhHHHhhhc----------CCCCchhHHHHHHH------HHHHHHhhhccCCC
Q 009994 424 CFDYLSL--------------GGVFSTGPVALLSG----------LNPRPLSLVLHFFA------VAIYGVGRLLLPFP 472 (520)
Q Consensus 424 ~~~~~~~--------------g~~~~~~~~~l~~~----------~~~~P~~~~~h~~~------~~l~~~~~~~~~~~ 472 (520)
+.+++.. +.+|..+++. ..+ ..+.||.|+||+|+ .|+++.+|+|+.++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~-~~~~~~~~~~~~~~~~~~G~r~p~~~l~~g~~l~d~~~~~~~ll~~~ 481 (549)
T 2r0c_A 404 VAEKLERSGARREFDAPGIHFGHTYRSSIVC-GEPETEVATGGWRPSARPGARAPHAWLTPTTSTLDLFGRGFVLLSFG 481 (549)
T ss_dssp HHHHHHHTTGGGGGSCHHHHHCCCCCSTTSC-CC---------CCCCCCTTSBCCCCBSSSSCBGGGGCSSSEEEEEES
T ss_pred HHHHHHhhcccccccccceEeccEeCCcccc-CCCCCCccccccCCCCCCCCcCCCcEeCCCcCHHHHcCCceEEEEcC
Confidence 7666542 4455544332 111 23789999999864 67788888888654
No 5
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=4.5e-42 Score=354.86 Aligned_cols=355 Identities=18% Similarity=0.171 Sum_probs=257.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.+++||+||||||+||++|+.|+++|++|+|+||.+......++..+++++.++|+++|+++.+..... ....+.++..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~-~~~~~~~~~~ 99 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGG-PLRRMAYRDF 99 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSC-CCCEEEEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcC-CCcceEEEEC
Confidence 567999999999999999999999999999999998777777889999999999999999988876543 3344555543
Q ss_pred C-ccccccCCCcCC--CCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecC
Q 009994 132 G-KSTRLSYPLEKF--HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAP 207 (520)
Q Consensus 132 ~-~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad 207 (520)
. ......++.... .....++.++|..|++.|.+.+.+ +++++++ |++++.+++. |++...+|++ ++||
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~a~ 171 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADG---VTVWFTDGSS--ASGD 171 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTE---EEEEETTSCE--EEES
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCc---EEEEEcCCCE--EeeC
Confidence 3 221122221110 012346789999999999999975 6777887 9999988874 6677788874 6699
Q ss_pred eEEEecCCcchhhhhh-cCCCCCCcccceeeEEe---ccCCCCCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 009994 208 LTIVCDGCFSNLRRSL-CKPKVDVPSCFVGLVLE---NCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPS 283 (520)
Q Consensus 208 ~vV~AdG~~S~vR~~l-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 283 (520)
+||+|||.+|.+|+.+ +.........+..+... ....+.......+++++++++++|+++++..|.+..+......
T Consensus 172 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 251 (407)
T 3rp8_A 172 LLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLA 251 (407)
T ss_dssp EEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCS
T ss_pred EEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCC
Confidence 9999999999999999 54322222222222111 1122333445667788889999999999888888765333333
Q ss_pred CCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCC---eEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHH
Q 009994 284 ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGN---IRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSD 360 (520)
Q Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~D 360 (520)
.+.+...+.+.+.+. .+.+.+...+ ....... ...++... ..+|..+||+|+|||||.++|++|||+|+||+|
T Consensus 252 ~~~~~~~~~l~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~d 327 (407)
T 3rp8_A 252 EDRDTLRADLSRYFA-GWAPPVQKLI-AALDPQTTNRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMED 327 (407)
T ss_dssp CCTTTHHHHHHHHTT-TCCHHHHHHH-HHSCGGGCEEEEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHH
T ss_pred CCchhHHHHHHHHhc-CCChHHHHHH-HcCCccceeEEeeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHHHH
Confidence 445566667766554 3445554433 3322222 33344433 278889999999999999999999999999999
Q ss_pred HHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHH
Q 009994 361 IVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFD 426 (520)
Q Consensus 361 a~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~ 426 (520)
|.+|+++|.... ..+.+|+.|+++|++++..++..++.+.+++... ++....+|+..+.
T Consensus 328 a~~La~~L~~~~------~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R~~~l~ 386 (407)
T 3rp8_A 328 AVVLGAVFRQTR------DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAWYQELR 386 (407)
T ss_dssp HHHHHHHHHSCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC------CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHHHHHHh
Confidence 999999998531 4678999999999999999999999999999876 5667778887665
No 6
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=3.2e-43 Score=383.23 Aligned_cols=392 Identities=18% Similarity=0.210 Sum_probs=267.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-----CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGK-----DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYAL 128 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~-----~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 128 (520)
++||+||||||+||++|+.|++ .|++|+||||.+......++..++++++++|+++|+++.+..... ....+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~-~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEAN-DMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCB-CCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhcc-ccceEEE
Confidence 5799999999999999999999 999999999998777777888999999999999999988876433 3445555
Q ss_pred EECCccccc----cCCCcC-CCCCccceeecchHHHHHHHHHHHcCC--CeEEEece-EEEEEeeC--------CeEEEE
Q 009994 129 FKDGKSTRL----SYPLEK-FHADVSGRSFHNGRFIQRMREKAASLP--NVRLEQGT-VTSLLEEN--------GTIKGV 192 (520)
Q Consensus 129 ~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~--~v~i~~~~-v~~~~~~~--------~~v~gv 192 (520)
+..+....+ .++... .........++|..+++.|.+.+.+.+ ++++++++ ++++++++ ..+ .|
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v 165 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TM 165 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EE
Confidence 543211001 111100 011223467899999999999998874 48999998 99998764 233 35
Q ss_pred EEEe----------------------------------------CCCcEEEEecCeEEEecCCcchhhhhhcCCCCCCcc
Q 009994 193 QYKT----------------------------------------KDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPS 232 (520)
Q Consensus 193 ~v~~----------------------------------------~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~ 232 (520)
++.+ .+|+..+++||+||+|||++|.||+.++++..+...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~ 245 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQT 245 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEE
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCc
Confidence 5554 356556789999999999999999999987654333
Q ss_pred cceeeEEe---ccCCCCCCceEEEe-cCCCcEEEEecCCCeEEEEEEeCCCC-------CCCCCchHHHHHHHHhcCCCC
Q 009994 233 CFVGLVLE---NCQLPFANHGHVIL-ADPSPILFYPISSTEVRCLVDVPGQK-------VPSISNGEMANYLKAMVAPQV 301 (520)
Q Consensus 233 ~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~ 301 (520)
.....++. ....|.......+. .++++++++|.+++.+++++.++... ....+.+++.+.+++.+.+..
T Consensus 246 ~~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~ 325 (665)
T 1pn0_A 246 DYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYT 325 (665)
T ss_dssp EEEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSC
T ss_pred cEEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCccc
Confidence 22222221 22344322222222 35788899999998888887765332 123455666666665554321
Q ss_pred ChhhHHHHHHhhhcCCeEEecCCCCCCCCCC-CCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHH
Q 009994 302 PPELHEAFVSAVERGNIRTMPNRSMPADPQP-TPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASL 380 (520)
Q Consensus 302 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~ 380 (520)
. ++ ........++.....+.+|. .|||+|+|||||.++|++|||||+||+||.+|+|+|+.+.. +.+.
T Consensus 326 ~-~~-------~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~---g~a~ 394 (665)
T 1pn0_A 326 F-DV-------QQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT---GRAK 394 (665)
T ss_dssp C-EE-------EEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT---TCBC
T ss_pred C-ce-------eeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc---CCCc
Confidence 1 11 00012234445556678898 79999999999999999999999999999999999987642 2234
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChh--------HHHHHHHHHH---H-HHhcCCCCchhHHHhh------
Q 009994 381 GRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQ--------ARKEMRQACF---D-YLSLGGVFSTGPVALL------ 442 (520)
Q Consensus 381 ~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~--------~~~~lr~~~~---~-~~~~g~~~~~~~~~l~------ 442 (520)
+.+|++|+++|+|++..++..++.+.++|...+.. ....+++.+. . ....+..|..+++...
T Consensus 395 ~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~ 474 (665)
T 1pn0_A 395 RDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQE 474 (665)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCSBTTBCSTTCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhhccccccCcccCCCcccCCCccccc
Confidence 67999999999999999999999999988754311 0122222221 1 1234556665544211
Q ss_pred hcCCCCchhHHHHHHH
Q 009994 443 SGLNPRPLSLVLHFFA 458 (520)
Q Consensus 443 ~~~~~~P~~~~~h~~~ 458 (520)
-....+||.|+||+++
T Consensus 475 ~~~~~~~G~r~p~~~~ 490 (665)
T 1pn0_A 475 LAKNCVVGTRFKSQPV 490 (665)
T ss_dssp GBTTSCTTSBCCCCEE
T ss_pred cCCCCCCcCCCCCCeE
Confidence 0123579999999865
No 7
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=3e-42 Score=369.21 Aligned_cols=356 Identities=19% Similarity=0.160 Sum_probs=251.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.+++||+||||||+||++|+.|+++|++|+||||.+......++..++++++++|+++|+++.+.......... . ..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~--~-~~ 123 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGL--P-FA 123 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBC--C-BT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCc--e-eC
Confidence 45689999999999999999999999999999999887777889999999999999999999887654332211 0 11
Q ss_pred CccccccCCCcCCC-CCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFH-ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
+. ....++..... ..+.++.++|..+++.|.+.+++. ++++++++ |++++++++.+. |++...+|+ .+++||+|
T Consensus 124 ~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~-~~~~a~~v 199 (570)
T 3fmw_A 124 GI-FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVE-VTVAGPSGP-YPVRARYG 199 (570)
T ss_dssp TB-CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBCSSCEE-EEEEETTEE-EEEEESEE
T ss_pred Cc-ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCeEE-EEEEeCCCc-EEEEeCEE
Confidence 11 00012211111 223457799999999999999887 89999997 999998877654 555556773 45789999
Q ss_pred EEecCCcchhhhhhcCCCCCCcccceeeEEeccCCCCCC-ceEEEecCCCcEEE-EecCCCeE-EEEEEeCCCC----CC
Q 009994 210 IVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPFAN-HGHVILADPSPILF-YPISSTEV-RCLVDVPGQK----VP 282 (520)
Q Consensus 210 V~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~----~~ 282 (520)
|+|||.+|.+|+.++++.+...+...+++.. ...+.+. ...+...+.+++++ +|++++.. ++++..+... ..
T Consensus 200 V~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~ 278 (570)
T 3fmw_A 200 VGCDGGRSTVRRLAADRFPGTEATVRALIGY-VTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEG 278 (570)
T ss_dssp EECSCSSCHHHHHTTCCCCCCCCCEEEEEEE-CCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----C
T ss_pred EEcCCCCchHHHHcCCCCccceeeeEEEEEE-EEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCcccccc
Confidence 9999999999999998776666555555443 2222222 11112445567766 79988876 6776654221 12
Q ss_pred CCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcC-CeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHH
Q 009994 283 SISNGEMANYLKAMVAPQVPPELHEAFVSAVERG-NIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDI 361 (520)
Q Consensus 283 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da 361 (520)
..+.+++.+.+++.+...+. ..+.. ....|+.....+.+|..|||+|+|||||.++|++|||+|+||+||
T Consensus 279 ~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA 349 (570)
T 3fmw_A 279 PVTLEDLGAAVARVRGTPLT---------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDA 349 (570)
T ss_dssp CCCHHHHHHHTTSSSSCCCC---------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcccc---------cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHH
Confidence 33445555555443322211 11112 455788888888999999999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHHHH
Q 009994 362 VVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYL 428 (520)
Q Consensus 362 ~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~ 428 (520)
.+|+|+|+.+. .+.+.+.+|++|+++|++++..++..++.+.++|... .+....+|+.++..+
T Consensus 350 ~~La~~La~~~---~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~-~~~~~~lR~~~~~l~ 412 (570)
T 3fmw_A 350 VNLGWKLAARV---RGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPD-EQHTTPLRGFVEELL 412 (570)
T ss_dssp HHHHHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC-TTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHh
Confidence 99999998653 1123467999999999999999999999999999764 333667787766554
No 8
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=8.4e-42 Score=371.47 Aligned_cols=394 Identities=17% Similarity=0.172 Sum_probs=259.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh-CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGK-DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.++||+||||||+||++|+.|++ +|++|+||||.+......++..++++++++|+++|+.+.+..... ......++..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~-~~~~~~~~~~ 109 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEAC-WINDVTFWKP 109 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcc-cccceEEECC
Confidence 46899999999999999999999 999999999998777778888999999999999999988766433 3344445542
Q ss_pred -----Ccccc-ccCCCcC-CCCCccceeecchHHHHHHHHHHHcCC-CeEEEece-EEEEEeeCC---eEEEEEEEe---
Q 009994 132 -----GKSTR-LSYPLEK-FHADVSGRSFHNGRFIQRMREKAASLP-NVRLEQGT-VTSLLEENG---TIKGVQYKT--- 196 (520)
Q Consensus 132 -----~~~~~-~~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~v~i~~~~-v~~~~~~~~---~v~gv~v~~--- 196 (520)
+.... ..++... .........++|..+++.|.+.+.+.+ ++++++++ |++++++++ ..+.|++.+
T Consensus 110 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~ 189 (639)
T 2dkh_A 110 DPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDA 189 (639)
T ss_dssp CTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSG
T ss_pred CCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccc
Confidence 21110 0111000 111223467899999999999999986 45999987 999988753 223365554
Q ss_pred -CCCcEEEEecCeEEEecCCcchhhhhhcCCCCCCcccceeeEE---eccCCCCCCceEEEecCCCcEEEEecCCC-eEE
Q 009994 197 -KDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVL---ENCQLPFANHGHVILADPSPILFYPISST-EVR 271 (520)
Q Consensus 197 -~~g~~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 271 (520)
.+|+..+++||+||+|||++|.+|+.++++..+........+. ....+|.......+..++++++++|..++ ..+
T Consensus 190 ~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r 269 (639)
T 2dkh_A 190 AHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVR 269 (639)
T ss_dssp GGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEE
T ss_pred cCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEE
Confidence 3676667889999999999999999998865443322211111 12234432222222336778899999887 677
Q ss_pred EEEEeCC--CC----CCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCC------------C
Q 009994 272 CLVDVPG--QK----VPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQP------------T 333 (520)
Q Consensus 272 ~~~~~~~--~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------~ 333 (520)
+++.++. .. ....+.+++.+.+++.+.+... ++ ........++.....+.+|. .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 341 (639)
T 2dkh_A 270 FYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKL-EV-------KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPL 341 (639)
T ss_dssp EEEECC-----------CCCHHHHHHHHHHHHTTSCE-EE-------EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCC
T ss_pred EEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccC-cc-------eeeeEEEecccccchhhhhhccccccccccCcc
Confidence 7776543 11 1234555666666555443110 11 00011234455555566776 8
Q ss_pred CcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCC
Q 009994 334 PGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSP 413 (520)
Q Consensus 334 grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~ 413 (520)
|||+|+|||||.++|++|||||+||+||.+|+|+|+.+.. +.+.+.+|++|+++|+|++..++..++.+.+++...+
T Consensus 342 gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~---g~a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~~ 418 (639)
T 2dkh_A 342 PRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLR---KQCAPELLHTYSSERQVVAQQLIDFDREWAKMFSDPA 418 (639)
T ss_dssp CCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHT---TSBCGGGGHHHHHHHHHHHHHHHHHHHHSCC------
T ss_pred CcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHc---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999987642 2234579999999999999999999998888886542
Q ss_pred hhH------HHHHHHHHH---H-HHhcCCCCchhHHHhhh-----cCCCCchhHHHHHHH
Q 009994 414 DQA------RKEMRQACF---D-YLSLGGVFSTGPVALLS-----GLNPRPLSLVLHFFA 458 (520)
Q Consensus 414 ~~~------~~~lr~~~~---~-~~~~g~~~~~~~~~l~~-----~~~~~P~~~~~h~~~ 458 (520)
... ...+++... . ....+.+|..+++.... ....+||.|+||+++
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~~~~~~~G~r~p~~~~ 478 (639)
T 2dkh_A 419 KEGGQGGVDPKEFQKYFEQHGRFTAGVGTHYAPSLLTGQAKHQALASGFTVGMRFHSAPV 478 (639)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCCCCCCSSSSSCCCTTGGGBTTSCTTSBCCCCEE
T ss_pred cccccccccHHHHHHHHHHhccccccCCcccCCCCccCCCCccccCCCCCCcCCCCCCeE
Confidence 210 112222111 1 12345666655432110 123579999999865
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.3e-41 Score=346.63 Aligned_cols=359 Identities=23% Similarity=0.252 Sum_probs=251.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC-
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD- 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~- 131 (520)
.++||+||||||+|+++|+.|+++|++|+|+||++......++..+.+++.+.|+++|+.+.+..... ...+..++..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~~ 83 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG-RVRHELEVYHD 83 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC-EEECEEEEEET
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC-CcceeEEEeCC
Confidence 35899999999999999999999999999999997665667888999999999999999988865433 3334444443
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
+.. ...++.........++.++|..|.+.|.+.+.+.+++++++++ |+++.++++++++ .++..+|+ +++||+||
T Consensus 84 g~~-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-~v~~~~g~--~~~ad~vV 159 (399)
T 2x3n_A 84 GEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAID-QVRLNDGR--VLRPRVVV 159 (399)
T ss_dssp TEE-EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEE-EEEETTSC--EEEEEEEE
T ss_pred CCE-EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEE-EEEECCCC--EEECCEEE
Confidence 321 1122211122233467899999999999999987789999987 9999988775420 45567776 46699999
Q ss_pred EecCCcchhhhhhcCCCCCC--cccc--eeeEEe-ccCCCCCCceEEEecC-CCcEEEEecCCCeEEEEEEeCCCCCC--
Q 009994 211 VCDGCFSNLRRSLCKPKVDV--PSCF--VGLVLE-NCQLPFANHGHVILAD-PSPILFYPISSTEVRCLVDVPGQKVP-- 282 (520)
Q Consensus 211 ~AdG~~S~vR~~l~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~-- 282 (520)
+|||.+|.+|+.++++.... .... .++... ....|.. . .++.+ +++++++|+++....|.+.++.+...
T Consensus 160 ~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 236 (399)
T 2x3n_A 160 GADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAERN--R-LYVDSQGGLAYFYPIGFDRARLVVSFPREEAREL 236 (399)
T ss_dssp ECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHCE--E-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHH
T ss_pred ECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCCc--c-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccc
Confidence 99999999999998754333 2222 333321 1112222 3 66677 88899999998777776644422110
Q ss_pred --CCCchHHHHHHHHhcCCCCChhhH-HHHHHhhhcCCeEEecCCC-CCCCCCCCCcEEEEccCCCCCCCCCCchhhHHH
Q 009994 283 --SISNGEMANYLKAMVAPQVPPELH-EAFVSAVERGNIRTMPNRS-MPADPQPTPGALLMGDAFNMRHPLTGGGMTVAL 358 (520)
Q Consensus 283 --~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~-~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al 358 (520)
..+.+++.+.+.. +++.+. ..+ +......+..++... ....+|..+||+|+|||||.++|++|||+|+||
T Consensus 237 ~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al 310 (399)
T 2x3n_A 237 MADTRGESLRRRLQR-----FVGDESAEAI-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAI 310 (399)
T ss_dssp HHSTTSHHHHHHHHT-----TCCGGGHHHH-HTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHH
T ss_pred cccCCHHHHHHHHhh-----cCCcchhhHH-hcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHH
Confidence 1234455555542 333442 222 222212445677766 567789899999999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHHHHh
Q 009994 359 SDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLS 429 (520)
Q Consensus 359 ~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~~ 429 (520)
+||.+|+++|..... .+.+.+.+|+.|+++|++++..++..++.+.+++... ++....+ +.++..+.
T Consensus 311 ~da~~La~~L~~~~~--~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~-~~~~~~~~ 377 (399)
T 2x3n_A 311 EDASALADALDLALR--DACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF-DTALQGSS 377 (399)
T ss_dssp HHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH-HC------
T ss_pred HHHHHHHHHHHhhhc--ccchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH-HHHHhhhc
Confidence 999999999986532 1223578999999999999999999999999988764 4445555 66655544
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=5.9e-40 Score=338.68 Aligned_cols=341 Identities=17% Similarity=0.203 Sum_probs=214.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCce--eeeeeccchHHHHHhcCchhHHhhcccc--ee-ceEEEE
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI--VGELLQPGGYLKLVELGLEDCVEEIDAQ--QV-LGYALF 129 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~--~g~~l~~~~~~~l~~lGl~~~l~~~~~~--~~-~~~~~~ 129 (520)
++|+||||||+||++|+.|+++|++|+|+||++.+..+. .+..++++++++|+++|+.+.+..+... .. ....+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 589999999999999999999999999999998766554 4567889999999999998776543221 11 111222
Q ss_pred ECCcc-ccccCC---CcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009994 130 KDGKS-TRLSYP---LEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRA 204 (520)
Q Consensus 130 ~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~ 204 (520)
..... ...... ............++|..|.+.|.+.+. .++++++ +++++++++. +|++...||++ +
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~----~~v~~~~~v~~~~~~~~~--~v~v~~~dG~~--~ 153 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLA----NTIQWNKTFVRYEHIENG--GIKIFFADGSH--E 153 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCT----TTEECSCCEEEEEECTTS--CEEEEETTSCE--E
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhcc----ceEEEEEEEEeeeEcCCC--eEEEEECCCCE--E
Confidence 21111 100000 000111223357889999999887652 3467787 9999876554 36677889985 5
Q ss_pred ecCeEEEecCCcchhhhhhcCCCCCCcccceeeEEecc-------CCCC---CCceEEEecC-CCcE------------E
Q 009994 205 YAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENC-------QLPF---ANHGHVILAD-PSPI------------L 261 (520)
Q Consensus 205 ~ad~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~-~~~~------------~ 261 (520)
+||+||+|||.+|.||+.+++...........+..... ..+. ......++.. +... .
T Consensus 154 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTS
T ss_pred EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeE
Confidence 59999999999999999998765443333332222100 0000 0000111111 1111 1
Q ss_pred EEecCCCe--EEEEEEeCC----CCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCC-CCCCCCCCC
Q 009994 262 FYPISSTE--VRCLVDVPG----QKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRS-MPADPQPTP 334 (520)
Q Consensus 262 ~~p~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~g 334 (520)
.++..... ..|.+.... +.......+...+.+++.+. .+.+.+...+ +..+...+..+.... .+..+|..|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~li-~~~~~~~~~~~~~~~~~~~~~~~~g 311 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSLHTLV-QQSDMENISPLHLRSMPHLLPWKSS 311 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHHHHHH-HTSCTTCCEEEEEEECCCCCCCCCC
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHHHHHH-Hhcccceeccchhcccccccccccc
Confidence 11111111 112222111 12223455666777776554 4455554433 333333444443332 245679999
Q ss_pred cEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHh
Q 009994 335 GALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYK 407 (520)
Q Consensus 335 rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~ 407 (520)
||+|+|||||.++|++|||||+||+||.+|+|+|+.+.. ....++.+|++|+++|+|++..++..|....+
T Consensus 312 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~--~~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 312 TVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS--GHEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp SEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987532 22346789999999999999999998876554
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.7e-39 Score=332.55 Aligned_cols=375 Identities=21% Similarity=0.227 Sum_probs=247.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC--CCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE--PDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~--~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++||+||||||+|+++|+.|+++|++|+|+||.+.. ....++..+.++++++|+++|+.+.+.... ....++.++..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~-~~~~~~~~~~~ 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG-LVHEGVEIAFA 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC-EEESCEEEEET
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC-CccceEEEEEC
Confidence 479999999999999999999999999999998642 123445579999999999999998887643 23445555554
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
+......++ .......++.+++..+.+.|.+.+.+. ++++++++ |+++.++++....|+++ .+|+..+++||+||
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV 156 (394)
T 1k0i_A 81 GQRRRIDLK--RLSGGKTVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIA 156 (394)
T ss_dssp TEEEEECHH--HHHTSCCEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEE
T ss_pred CceEEeccc--cccCCCceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEE
Confidence 443222211 111123456778889999999999876 89999987 99998764322234442 46765568899999
Q ss_pred EecCCcchhhhhhcCCCCCCcccc--eeeEEeccCCCC-CCceEEEecCCCcEEEEecCCCeEEEEEEeCCCC-CCCCCc
Q 009994 211 VCDGCFSNLRRSLCKPKVDVPSCF--VGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK-VPSISN 286 (520)
Q Consensus 211 ~AdG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~ 286 (520)
+|||.+|.+|+.++.......... ..+.......+. .....+...+++..++.+.+++..+|++..+... ...++.
T Consensus 157 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T 1k0i_A 157 GCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSD 236 (394)
T ss_dssp ECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCH
T ss_pred ECCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCH
Confidence 999999999999875421111011 111111112222 1222222334455566666667777777665332 223344
Q ss_pred hHHHHHHHHhcCCCCChhhHHHHHHhhhcCC---eEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHH
Q 009994 287 GEMANYLKAMVAPQVPPELHEAFVSAVERGN---IRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVV 363 (520)
Q Consensus 287 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~ 363 (520)
++..+.+.+.+ .+... ..+.... ...++.......+|..|||+|+|||||.++|++|||+|+||+||.+
T Consensus 237 ~~~~~~l~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~ 308 (394)
T 1k0i_A 237 ERFWTELKARL----PSEVA----EKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVST 308 (394)
T ss_dssp HHHHHHHHHTS----CHHHH----HHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhh----Ccccc----cccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHH
Confidence 44445554432 22111 1111111 1233444445667888999999999999999999999999999999
Q ss_pred HHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCC--ChhHHHHHHHHHHHHHhcCCCCchhHHHh
Q 009994 364 LRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSS--PDQARKEMRQACFDYLSLGGVFSTGPVAL 441 (520)
Q Consensus 364 La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~--~~~~~~~lr~~~~~~~~~g~~~~~~~~~l 441 (520)
|+++|..... ...+.+|+.|+++|++++..++..+..+..++... .++....+|+.++..+...+...+..+..
T Consensus 309 La~~L~~~~~----~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~ 384 (394)
T 1k0i_A 309 LYRLLLKAYR----EGRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAEN 384 (394)
T ss_dssp HHHHHHHHHH----HCCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHhc----cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 9999976421 01246899999999999999998888777776533 25677888999888876655444444444
Q ss_pred hhcC
Q 009994 442 LSGL 445 (520)
Q Consensus 442 ~~~~ 445 (520)
+.|+
T Consensus 385 ~~g~ 388 (394)
T 1k0i_A 385 YVGL 388 (394)
T ss_dssp HSCC
T ss_pred hcCC
Confidence 4444
No 12
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2e-37 Score=320.33 Aligned_cols=360 Identities=20% Similarity=0.233 Sum_probs=223.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCe-EEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~-V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.++||+||||||+||++|+.|+++|++ |+|+||.+......++..+++++++.|+++|+.+.+..... ....+.++..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~-~~~~~~~~~~ 81 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI-PTHELRYIDQ 81 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE-EECEEEEECT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC-CcceEEEEcC
Confidence 358999999999999999999999999 99999997766667788899999999999999988876433 3334444432
Q ss_pred -CccccccCCCc-CCCCCccceeecchHHHHHHHHHHHc-CCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEec
Q 009994 132 -GKSTRLSYPLE-KFHADVSGRSFHNGRFIQRMREKAAS-LPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYA 206 (520)
Q Consensus 132 -~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~a 206 (520)
+... ...+.. ........+.++|..|.+.|.+.+.+ .+.+++++++ |+++.+ ++.+. |++.+ .+|+..+++|
T Consensus 82 ~g~~~-~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~a 158 (410)
T 3c96_A 82 SGATV-WSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGA 158 (410)
T ss_dssp TSCEE-EEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEE
T ss_pred CCCEE-eeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEec
Confidence 2211 111100 00112234678999999999999876 3446788887 999988 55443 44433 2475556889
Q ss_pred CeEEEecCCcchhhhhhcCCCCCCcccceeeEEe-----ccCCCCCCceEEEecC--CCcEEEEecCC-----C--eEEE
Q 009994 207 PLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLE-----NCQLPFANHGHVILAD--PSPILFYPISS-----T--EVRC 272 (520)
Q Consensus 207 d~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~p~~~-----~--~~~~ 272 (520)
|+||+|||.+|.+|+.++..... ..+.+.... ..... .....++++. ++.++++|+.+ + ...|
T Consensus 159 d~vV~AdG~~S~vR~~l~~~~~~--~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w 235 (410)
T 3c96_A 159 DVLVGADGIHSAVRAHLHPDQRP--LSHGGITMWRGVTEFDRFL-DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNW 235 (410)
T ss_dssp SEEEECCCTTCHHHHHHCTTCCC--CEEEEEEEEEEEEEESCCT-TSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEE
T ss_pred CEEEECCCccchhHHHhcCCCCC--CCcCCeeEEEeeccccccc-CCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEE
Confidence 99999999999999999754321 122222211 11111 2233445553 56788999863 2 3445
Q ss_pred EEEeCCC------CCCCCCc-hHHHHHHHHhcCCCCCh--hhHHHHHHhhhcCCeEEecCCC-CCCCCCCCCcEEEEccC
Q 009994 273 LVDVPGQ------KVPSISN-GEMANYLKAMVAPQVPP--ELHEAFVSAVERGNIRTMPNRS-MPADPQPTPGALLMGDA 342 (520)
Q Consensus 273 ~~~~~~~------~~~~~~~-~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~grv~LvGDA 342 (520)
.+..+.. ....+.. ....+++. .+....++ .+...+ .. ...+..+++.. .+..+|..|||+|+|||
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~i-~~--~~~~~~~~~~~~~~~~~~~~grv~LvGDA 311 (410)
T 3c96_A 236 VCMVPSAAVGQLDNEADWNRDGRLEDVLP-FFADWDLGWFDIRDLL-TR--NQLILQYPMVDRDPLPHWGRGRITLLGDA 311 (410)
T ss_dssp EEEEEHHHHCCCCSSCCTTCBCCHHHHHH-HHTTCCBTTBCHHHHH-HT--CSEEEEEEEEECCCCSCCCBTTEEECTHH
T ss_pred EEEecCcccccCCCccccCCCCCHHHHHH-HhcCCCCchhHHHHHH-hc--CcccceeecccCCCccccccCCEEEEecc
Confidence 4443211 1111111 12222222 22221111 122222 11 12344555433 24568989999999999
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHH-HHHhh--hcCCC-hhHHH
Q 009994 343 FNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAG-ALYKV--FSSSP-DQARK 418 (520)
Q Consensus 343 Ah~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~-~~~~~--~~~~~-~~~~~ 418 (520)
||.++|++|||+|+||+||.+|+++|... .+.+.+|++|+++|++++..++..++ .++.+ +.... ....+
T Consensus 312 Ah~~~P~~GqG~n~ai~Da~~La~~L~~~------~~~~~~L~~Ye~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 385 (410)
T 3c96_A 312 AHLMYPMGANGASQAILDGIELAAALARN------ADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSA 385 (410)
T ss_dssp HHCCCSSTTCTHHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred cCCCCCccchhHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhccCCCCHH
Confidence 99999999999999999999999999753 13578999999999999999888776 44555 22221 22345
Q ss_pred HHHHHHHHHHh
Q 009994 419 EMRQACFDYLS 429 (520)
Q Consensus 419 ~lr~~~~~~~~ 429 (520)
.+++.+.+|..
T Consensus 386 ~~~~~~~~~~~ 396 (410)
T 3c96_A 386 ALEAITGSYRN 396 (410)
T ss_dssp -----------
T ss_pred HHHHHHHHhhh
Confidence 56666655544
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.5e-37 Score=318.34 Aligned_cols=328 Identities=18% Similarity=0.156 Sum_probs=223.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC-CCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE-PDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~-~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
+..+||+||||||+||++|+.|+++|++|+|+||.+.. .....|..+++++.+.|+++|+.+ ... ........++.
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~--~~~-~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL--DSI-SVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG--GGT-CBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc--ccc-cccccceEEEe
Confidence 34689999999999999999999999999999998754 344567778999999999999987 222 22334444444
Q ss_pred C-CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCe
Q 009994 131 D-GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPL 208 (520)
Q Consensus 131 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~ 208 (520)
. ........+. ....+++..+.+.|++.+ +++++++++ |+++.+++++ |++...+|++ ++||+
T Consensus 80 ~~~g~~~~~~~~-------~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~ad~ 144 (397)
T 2vou_A 80 ALTGERVGSVPA-------DWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSET---VQMRFSDGTK--AEANW 144 (397)
T ss_dssp TTTCCEEEEEEC-------CCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSC---EEEEETTSCE--EEESE
T ss_pred cCCCCccccccC-------cccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCE---EEEEECCCCE--EECCE
Confidence 3 2211111110 112366778999998876 378899887 9999887774 5566777864 66999
Q ss_pred EEEecCCcchhhhhhcCCCCCCcccceeeEEe-----ccCCCCC------CceEEEecCCCcEEEEecCCC------eEE
Q 009994 209 TIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLE-----NCQLPFA------NHGHVILADPSPILFYPISST------EVR 271 (520)
Q Consensus 209 vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~p~~~~------~~~ 271 (520)
||+|||.+|.+|+.++ +... .+.+.... ...++.. ....+++++++.+.++|+.++ ...
T Consensus 145 vV~AdG~~S~vr~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (397)
T 2vou_A 145 VIGADGGASVVRKRLL-GIEP---TYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLN 220 (397)
T ss_dssp EEECCCTTCHHHHHHH-CCCC---EEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEE
T ss_pred EEECCCcchhHHHHhc-cCCC---CccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEE
Confidence 9999999999999998 5322 22222111 1222211 123445566677888888753 445
Q ss_pred EEEEeCCCCC---CC------------------CCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCC
Q 009994 272 CLVDVPGQKV---PS------------------ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADP 330 (520)
Q Consensus 272 ~~~~~~~~~~---~~------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 330 (520)
|.+..+.... .. ...+...+ +.+.+...+++ +.+.+ ... .....+++....+.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~-~~~--~~~~~~~~~~~~~~~ 295 (397)
T 2vou_A 221 FQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQ-FHSKGESLFKP-FRDLV-LNA--SSPFVTVVADATVDR 295 (397)
T ss_dssp EEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHH-HHHHHTTSCHH-HHHHH-HHC--SSCEEEEEEEBCCSC
T ss_pred EEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHH-HHHHHHhhChH-HHHHH-hcc--CCcceeeeeeecCCc
Confidence 5554442210 00 01222333 33333334554 43322 221 122345555556778
Q ss_pred CCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhc
Q 009994 331 QPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFS 410 (520)
Q Consensus 331 ~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~ 410 (520)
|..|||+|+|||||.++|++|||+|+||+||..|++.|... .+.+.+|++|+++|++++..++..+..+.+++.
T Consensus 296 ~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~ 369 (397)
T 2vou_A 296 MVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQ 369 (397)
T ss_dssp SEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999741 234789999999999999999999999888887
Q ss_pred CC
Q 009994 411 SS 412 (520)
Q Consensus 411 ~~ 412 (520)
.+
T Consensus 370 ~~ 371 (397)
T 2vou_A 370 HG 371 (397)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 14
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=1.8e-36 Score=321.80 Aligned_cols=357 Identities=19% Similarity=0.207 Sum_probs=243.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHH-HHHhcCchhHHhhcccceeceEEEEEC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYL-KLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.++||+|||||++|+++|+.|+++|++|+|+||... +....|..+.+.+.. .++.+|+.+.+............+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~-~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAF-PRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS-SCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCC-CCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 458999999999999999999999999999999863 333456677777664 899999998887655443333333222
Q ss_pred Cccc--cccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCe
Q 009994 132 GKST--RLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPL 208 (520)
Q Consensus 132 ~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~ 208 (520)
.... ...+..........++.++|..|.+.|.+.+++. |+++++++ |+++..+++++.+|++.+.+|+..+++||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 2111 1222222222344567899999999999999886 89999986 999999999988899988888766788999
Q ss_pred EEEecCCcchhhhhhcCCCCCCcccceeeEE--e-ccCCCC--CCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 009994 209 TIVCDGCFSNLRRSLCKPKVDVPSCFVGLVL--E-NCQLPF--ANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPS 283 (520)
Q Consensus 209 vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 283 (520)
||+|||.+|.+|+.++...........++.. . ....+. ......+..++++++++|+.++...+.+.++.+....
T Consensus 164 VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~ 243 (512)
T 3e1t_A 164 IVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEA 243 (512)
T ss_dssp EEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTT
T ss_pred EEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhh
Confidence 9999999999999996532222222222221 1 112232 2233445667789999999998777777664221111
Q ss_pred CCchHHHHHHHHhcCCCCChhhHHHHHHhhh-----cCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHH
Q 009994 284 ISNGEMANYLKAMVAPQVPPELHEAFVSAVE-----RGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVAL 358 (520)
Q Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al 358 (520)
.. ....+.+.+.+. ..+.+.+.+..... .+.+...+.......+|..+||+|+|||||.++|++|||+|+|+
T Consensus 244 ~~-~~~~~~~~~~l~--~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al 320 (512)
T 3e1t_A 244 IK-DGHEAALLRYID--RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLAT 320 (512)
T ss_dssp TS-SCHHHHHHHHHH--TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHH
T ss_pred hc-CCHHHHHHHHHH--hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHH
Confidence 11 112222222221 11233322211110 11222233333345677889999999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhH
Q 009994 359 SDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQA 416 (520)
Q Consensus 359 ~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~ 416 (520)
+||..|++.|..... .+...+.+|+.|+++|+++...+..+...+|.+....+.++
T Consensus 321 ~dA~~La~~L~~~l~--~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r~ds~f 376 (512)
T 3e1t_A 321 YSALLVARAINTCLA--GEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQDTDSYF 376 (512)
T ss_dssp HHHHHHHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTCHH
T ss_pred HHHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHH
Confidence 999999999986542 22345679999999999999999999888888776544443
No 15
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=4.7e-36 Score=308.91 Aligned_cols=335 Identities=15% Similarity=0.167 Sum_probs=221.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeee--ecc-chHHHHHhcCchhHHhhcccceeceEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGEL--LQP-GGYLKLVELGLEDCVEEIDAQQVLGYAL 128 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~--l~~-~~~~~l~~lGl~~~l~~~~~~~~~~~~~ 128 (520)
+.++||+||||||+||++|+.|+++|++|+|+||.+....+..|.. +.+ .+.+.|+++|+.+.+........ . .+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~-~-~~ 101 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMG-V-NI 101 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCC-E-EE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccc-e-EE
Confidence 4568999999999999999999999999999999876544444443 343 56899999999988876433222 2 33
Q ss_pred EECCccccccC--CCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEe
Q 009994 129 FKDGKSTRLSY--PLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAY 205 (520)
Q Consensus 129 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ 205 (520)
+.......... +.. .......++|..|.+.|.+.+.+ +++++++ |+++.++++. +++...+|++ ++
T Consensus 102 ~~~~g~~~~~~~~~~~---~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~ 170 (398)
T 2xdo_A 102 ADEKGNILSTKNVKPE---NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPGKKK---WTLTFENKPS--ET 170 (398)
T ss_dssp ECSSSEEEEECCCGGG---TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEECSSS---EEEEETTSCC--EE
T ss_pred ECCCCCchhhcccccc---CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEECCCE---EEEEECCCcE--Ee
Confidence 33222111111 110 01122368899999999987643 4677776 9999887764 5566677764 56
Q ss_pred cCeEEEecCCcchhhhhhcCCCCCCcccceeeEEeccCCC-----C-------CCceEEEecCCCcEEEEecCCCeEEEE
Q 009994 206 APLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLP-----F-------ANHGHVILADPSPILFYPISSTEVRCL 273 (520)
Q Consensus 206 ad~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~ 273 (520)
||+||+|||.+|.+|+.++...+ .+.+.......++ . +....++++++..++.+|.+++..+++
T Consensus 171 ad~vV~AdG~~S~vR~~l~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~ 246 (398)
T 2xdo_A 171 ADLVILANGGMSKVRKFVTDTEV----EETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFG 246 (398)
T ss_dssp ESEEEECSCTTCSCCTTTCCCCC----EEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEE
T ss_pred cCEEEECCCcchhHHhhccCCCc----eEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEE
Confidence 99999999999999999864321 1222211111111 0 111223455666677789888887777
Q ss_pred EEeCC-CCC------CCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCC-CCCCCC-C--cEEEEccC
Q 009994 274 VDVPG-QKV------PSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMP-ADPQPT-P--GALLMGDA 342 (520)
Q Consensus 274 ~~~~~-~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~-g--rv~LvGDA 342 (520)
+.+.. +.. ...+.++..+.+.+.+. .+.+.+.+.+.. ...+..++....+ ..+|.. + ||+|+|||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDA 322 (398)
T 2xdo_A 247 ISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDERYKELIHT---TLSFVGLATRIFPLEKPWKSKRPLPITMIGDA 322 (398)
T ss_dssp EEEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHHHHHHHHH---CSCCEEEEEEECCCCSCCCSCCSSCEEECTHH
T ss_pred EEEecCcccccccccCcCCHHHHHHHHHHHHc-CCChHHHHHHhC---cccceeeeeEeccCCCCcccCCCccEEEEeeh
Confidence 66532 111 11234555666665443 345555544432 1233333333322 236654 5 89999999
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHh-hhcC
Q 009994 343 FNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYK-VFSS 411 (520)
Q Consensus 343 Ah~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~-~~~~ 411 (520)
||.++|++|||+|+||+||.+|+++|.... . +..+.+|++|+++|++++..++..+..... +|..
T Consensus 323 Ah~~~P~~GqG~n~ai~Da~~La~~L~~~~---~-~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 388 (398)
T 2xdo_A 323 AHLMPPFAGQGVNSGLVDALILSDNLADGK---F-NSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKP 388 (398)
T ss_dssp HHCCCCTTSCSHHHHHHHHHHHHHHHHSCC---S-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred hccCCCccCccHHHHHHHHHHHHHHHHhcc---C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999998641 1 115789999999999999999888876654 4544
No 16
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.2e-36 Score=311.30 Aligned_cols=323 Identities=19% Similarity=0.159 Sum_probs=222.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
..+||+||||||+|+++|+.|+++|++|+|+||.+......++..+.+++.+.|+++|+.+.+..... ....+.++..+
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~-~~~~~~~~~~g 88 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH-TPPTYETWMHN 88 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB-CCSCEEEEETT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC-CccceEEEeCC
Confidence 35899999999999999999999999999999987766667888999999999999999988876433 33445555542
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
.. ...++.. ....+.++|..+.+.|.+.+.+. |+++++++ |+++.. ++ ++...+|++ ++||+||+
T Consensus 89 ~~-~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~-~~-----~v~~~~g~~--~~ad~vV~ 154 (379)
T 3alj_A 89 KS-VSKETFN----GLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP-VG-----RLTLQTGEV--LEADLIVG 154 (379)
T ss_dssp EE-EEEECGG----GCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET-TT-----EEEETTSCE--EECSEEEE
T ss_pred ce-eeeccCC----CCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe-CC-----EEEECCCCE--EEcCEEEE
Confidence 22 1111111 12357899999999999999886 89999997 999987 33 234567763 66999999
Q ss_pred ecCCcchhhhhhcCCCCCCcccceeeEEe-cc-----CCCCCC-ceEE--EecCCCcEEEEecCCCeEEEEEEeCCCCCC
Q 009994 212 CDGCFSNLRRSLCKPKVDVPSCFVGLVLE-NC-----QLPFAN-HGHV--ILADPSPILFYPISSTEVRCLVDVPGQKVP 282 (520)
Q Consensus 212 AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 282 (520)
|||.+|.+|+.+++........+..+... .. ....+. .... +++++++++++|++++...|++..+... +
T Consensus 155 AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~ 233 (379)
T 3alj_A 155 ADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAAD-P 233 (379)
T ss_dssp CCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTC-T
T ss_pred CCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCC-C
Confidence 99999999999986322111111112111 11 111122 2222 5677788999999999888877765321 1
Q ss_pred CCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCC-CCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHH
Q 009994 283 SISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRS-MPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDI 361 (520)
Q Consensus 283 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da 361 (520)
. ++++.+.+..+.. .++ .+.+.+ ...+...+..++... .+..+|..|||+|+|||||.++|++|||+|+||+||
T Consensus 234 ~--~~~l~~~~~~~~~-~~~-~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da 308 (379)
T 3alj_A 234 R--GSSVPIDLEVWVE-MFP-FLEPCL-IEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNA 308 (379)
T ss_dssp T--TTCSSCCHHHHHH-HCG-GGHHHH-HHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHH
T ss_pred C--HHHHHHHHhcCCc-hhc-cHHHHH-hhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHH
Confidence 1 1222222222110 111 111222 111112233333332 235678889999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHH
Q 009994 362 VVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLA 402 (520)
Q Consensus 362 ~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a 402 (520)
.+|+++|... .+.+.+|+.|+++|++++..++..+
T Consensus 309 ~~La~~L~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 309 FSLSQDLEEG------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHHTTSS------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccc------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999753 1247899999999999999988777
No 17
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.7e-36 Score=306.41 Aligned_cols=329 Identities=19% Similarity=0.230 Sum_probs=215.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC-ceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD-RIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~-~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++|||+|||||||||++|+.|+++|++|+|+||++.... ..+|..+.++ .++++|+......+ .....+..++..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~---~l~~l~~~~~~~~~-~~~~~~~~~~~~ 78 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKG---ILNEADIKADRSFI-ANEVKGARIYGP 78 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETH---HHHHTTCCCCTTTE-EEEESEEEEECT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHH---HHHHcCCCchhhhh-hcccceEEEEeC
Confidence 469999999999999999999999999999999875543 3457777765 56677765433222 123445555543
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
......... ........++.++|..|.+.|.+.+.+. |++++.++ |+++..+++++.++.... +++..+++||+||
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~~~~~~~v~~~~-~~~~~~~~a~~vI 155 (397)
T 3oz2_A 79 SEKRPIILQ-SEKAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRH-NNEIVDVRAKMVI 155 (397)
T ss_dssp TCSSCEEEE-CSSSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEE-TTEEEEEEEEEEE
T ss_pred CCceEeecc-ccccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeeccceeeeeeecc-cccceEEEEeEEE
Confidence 322211111 1122344578899999999999999887 79999887 999999999887776654 4555678899999
Q ss_pred EecCCcchhhhhhcCCCCCCcccceee--EEeccCCC-CCCceEEEec---CCCcEEEEecCCCeEEEEEEeCCCCCCCC
Q 009994 211 VCDGCFSNLRRSLCKPKVDVPSCFVGL--VLENCQLP-FANHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPSI 284 (520)
Q Consensus 211 ~AdG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 284 (520)
+|||.+|.+|+.++............. .......+ .++...++++ ++++.|++|.+++..++.+....+...
T Consensus 156 gAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~-- 233 (397)
T 3oz2_A 156 AADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIH-- 233 (397)
T ss_dssp ECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSC--
T ss_pred eCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhh--
Confidence 999999999999987543333222211 11111111 2334445544 346778999999877776654433221
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeE-EecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHH
Q 009994 285 SNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIR-TMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVV 363 (520)
Q Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~ 363 (520)
......+++.+.+... +.+ .......... ..+. .....++..+||+|+|||||.++|++|||+|+||+||..
T Consensus 234 ~~~~~~~~l~~~~~~~--~~l----~~~~~~~~~~~~~~~-~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~ 306 (397)
T 3oz2_A 234 NRFELKNYLDRFIENH--PGL----KKGQDIQLVTGGVSV-SKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMY 306 (397)
T ss_dssp SHHHHHHHHHHHHHTC--HHH----HTSEEEEEEEEEEEC-CCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHhC--ccc----cccceeeeeeccccc-cCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHH
Confidence 2334555555433211 111 1111101111 1222 233456778999999999999999999999999999999
Q ss_pred HHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHH
Q 009994 364 LRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTIN 399 (520)
Q Consensus 364 La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~ 399 (520)
||+.|.+.... ++..++.|+.|++.++.+.....
T Consensus 307 ~A~~i~~~l~~--~~~~~~~L~~Ye~~~~~~~~~~~ 340 (397)
T 3oz2_A 307 AAQVTKEAIES--NDYSPQMMQKYEKLIKERFERKH 340 (397)
T ss_dssp HHHHHHHHHHH--TCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHH
Confidence 99999765311 11235789999998877664443
No 18
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=3.3e-36 Score=322.92 Aligned_cols=361 Identities=16% Similarity=0.184 Sum_probs=242.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+.++||+|||||++|+++|+.|+++|++|+|+||...+ ....|..+.+.+.+.++.+|+++.+.........+..+...
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~-~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFP-RYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS-CCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCC-CCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 45799999999999999999999999999999998543 34567889999999999999998887755444434333322
Q ss_pred Cccc--cccCCCcCC--CCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEec
Q 009994 132 GKST--RLSYPLEKF--HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYA 206 (520)
Q Consensus 132 ~~~~--~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~a 206 (520)
.... ...+..... ...+.++.+++..|.+.|.+.+++. |+++++++ |+++..+++.+.+|++.. +|+..+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~~~~i~A 177 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRR-GGESVTVES 177 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECCSTTCEEEEEEE-TTEEEEEEE
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCEEEEEEec-CCceEEEEc
Confidence 2111 111111110 1223567899999999999999886 89999996 999987766555566654 665567889
Q ss_pred CeEEEecCCcchhhhhhcCCCCCCcccceeeE--Ee-ccCC--CCCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCC
Q 009994 207 PLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLV--LE-NCQL--PFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKV 281 (520)
Q Consensus 207 d~vV~AdG~~S~vR~~l~~~~~~~~~~~~~~~--~~-~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 281 (520)
|+||+|||.+|.+|+.+++...........+. +. .... +..........+++++|++|..++...+.+..+.+..
T Consensus 178 dlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~ 257 (591)
T 3i3l_A 178 DFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKS 257 (591)
T ss_dssp SEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGH
T ss_pred CEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHH
Confidence 99999999999999999865322111111111 11 1122 2223444556678899999999987777766553321
Q ss_pred CCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHH
Q 009994 282 PSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDI 361 (520)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da 361 (520)
.........+++.+... .. +.+.+.+...........++.......+|..+|++++|||||.++|+.|||+|+|++||
T Consensus 258 ~~l~~~~~~~~~~~l~~-~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA 335 (591)
T 3i3l_A 258 AEVREQGADAFYSSTLA-KC-AKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSA 335 (591)
T ss_dssp HHHHHHCHHHHHHHHHT-TC-HHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHH-hC-HHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHH
Confidence 11111112333333222 22 23333221111111222222223345677889999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHH--hhhcCCChhHHHH
Q 009994 362 VVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALY--KVFSSSPDQARKE 419 (520)
Q Consensus 362 ~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~--~~~~~~~~~~~~~ 419 (520)
..|+++|..... .+...+.+++.|+++|++....+..+....| ......+.+++..
T Consensus 336 ~~LA~~L~~~l~--~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~FW~~ 393 (591)
T 3i3l_A 336 VSAAAAIDRITR--HGDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFWRK 393 (591)
T ss_dssp HHHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHH
T ss_pred HHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHh
Confidence 999999976421 3344567899999999999999999999888 5555544455443
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.6e-35 Score=309.96 Aligned_cols=340 Identities=16% Similarity=0.193 Sum_probs=226.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC--CCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE--PDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~--~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++||+||||||+|+++|+.|+++|++|+|+||.+.. ....+|..+ +.+.++++|+.+...........+..++..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 589999999999999999999999999999998642 123345444 567888998875432211223334444432
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~v 209 (520)
....... ....++.++|..|.+.|.+.+.+. |++++.++ |+++..+++.+.+|++... +|+..+++||+|
T Consensus 83 ~~~~~~~-------~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~V 154 (453)
T 3atr_A 83 DMQTVWT-------VNGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVV 154 (453)
T ss_dssp TSSCEEE-------EEEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEE
T ss_pred CCceEEe-------ECCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEE
Confidence 2111111 112357899999999999999885 89999997 9999998888888888765 777667889999
Q ss_pred EEecCCcchhhhhhcCCCCC----Cc-ccceeeE--Ee-ccCCCCCCceEEEec----CCCcEEEEecCCCeEEEEEEeC
Q 009994 210 IVCDGCFSNLRRSLCKPKVD----VP-SCFVGLV--LE-NCQLPFANHGHVILA----DPSPILFYPISSTEVRCLVDVP 277 (520)
Q Consensus 210 V~AdG~~S~vR~~l~~~~~~----~~-~~~~~~~--~~-~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~ 277 (520)
|+|||.+|.+|+.++...+. .. ....++. +. ......+....++++ +++++|++|.+++..++.+.++
T Consensus 155 V~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~ 234 (453)
T 3atr_A 155 VEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQ 234 (453)
T ss_dssp EECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEE
T ss_pred EECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEec
Confidence 99999999999999865321 11 1112221 11 111222333445554 4678899999998877777665
Q ss_pred CCCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHH
Q 009994 278 GQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVA 357 (520)
Q Consensus 278 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~a 357 (520)
.........+.+.+++.+. .+.+... +..+. .-...+. ..+..+|..+|++|+|||||.++|++|||+|+|
T Consensus 235 ~~~~~~~~~~~~~~~l~~~-~~~~~~~------~~~~~-~~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~A 305 (453)
T 3atr_A 235 GGMGYPSIHEYYKKYLDKY-APDVDKS------KLLVK-GGALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSA 305 (453)
T ss_dssp SSSCCCCHHHHHHHHHHHH-CTTEEEE------EEEEE-EEEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHH
T ss_pred CCCCCCCHHHHHHHHHHhh-hhhcCCC------eEEec-cceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHH
Confidence 3321111223344444332 2222110 00000 0012233 345667888999999999999999999999999
Q ss_pred HHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChh
Q 009994 358 LSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQ 415 (520)
Q Consensus 358 l~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~ 415 (520)
|+||..||++|......+ +..+++|+.|+++|+++....+..+..+.+++..-.++
T Consensus 306 i~da~~la~~l~~~l~~~--~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 361 (453)
T 3atr_A 306 MISGYCAAKAILSAFETG--DFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSND 361 (453)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHHcC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 999999999997542100 11246899999999999999988888777776543333
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.3e-34 Score=298.31 Aligned_cols=338 Identities=19% Similarity=0.159 Sum_probs=232.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
.++||+|||||++|+++|+.|+++|++|+|+||...+ ....|..+.+.+.+.++++|+.+.+.........+..+...+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~-~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP-RFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS-CCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-CCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 4589999999999999999999999999999998543 346788899999999999999998887665555566555444
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
......+..........++.++|..|.+.|.+.+++. |+++++++ |+++..+++++. +.+.+.+|+..+++||+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~-v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSV-TTIEDINGNKREIEARFIID 160 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEE-EEEEETTSCEEEEEEEEEEE
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCCCEEEEEcCEEEE
Confidence 4333333322222234567899999999999999887 89999997 999998877654 67778889877788999999
Q ss_pred ecCCcchhhhhhcCCCCCCcccceeeEEe-ccCCCCC----CceEEEec---CCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 009994 212 CDGCFSNLRRSLCKPKVDVPSCFVGLVLE-NCQLPFA----NHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPS 283 (520)
Q Consensus 212 AdG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 283 (520)
|||.+|.+|+.++.+.+........+... ....+.+ +...+++. +.+++|++|.+++...+.+..+.+....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~ 240 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDE 240 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTT
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhh
Confidence 99999999999987544333222222221 1111111 12223322 5568899999999877777665321111
Q ss_pred CCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHH
Q 009994 284 ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVV 363 (520)
Q Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~ 363 (520)
. .....+.+.+... .. +.+.+.+........+..++.......++..+|++++|||||.++|++|+|+|.|++||..
T Consensus 241 ~-~~~~~~~l~~~~~-~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~ 317 (421)
T 3nix_A 241 Y-TGTPEERMRAMIA-NE-GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSK 317 (421)
T ss_dssp S-CSCHHHHHHHHHH-TC-TTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHH-hC-cHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHH
Confidence 1 1122333333222 11 2233332222122244556666666677888999999999999999999999999999999
Q ss_pred HHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHH
Q 009994 364 LRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINT 400 (520)
Q Consensus 364 La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~ 400 (520)
|++.|........ ..+++.|+++++........
T Consensus 318 la~~l~~~~~~~~----~~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 318 GGKLAVQFLKGEE----VNWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp HHHHHHHHHTTCC----CCHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCc----hhHHHHHHHHHHHHHHHHHH
Confidence 9999976432111 12667788887765554433
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=7.6e-34 Score=291.80 Aligned_cols=354 Identities=18% Similarity=0.212 Sum_probs=233.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC-ceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD-RIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~-~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
++||+|||||++|+++|+.|+++|++|+|+||+..... ..++..+.+ +.++++|+++.... ......+..++...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~lg~~~~~~~-~~~~~~~~~~~~~~ 79 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSF-IANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTT-EEEEESEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHcCCCCChHH-hhhhcceEEEEcCC
Confidence 58999999999999999999999999999999874432 334444433 67788898654222 22344455555432
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
......++.... ..+.++.+++..|.+.|.+.+++. |++++.++ |+++..+++.+.+|++... ++..+++||+||+
T Consensus 80 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~-~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 80 EKRPIILQSEKA-GNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRHN-NEIVDVRAKMVIA 156 (397)
T ss_dssp CSSCEEEC------CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred CCEEEEEecccc-CCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEeCCEEEEEEEEEC-CeEEEEEcCEEEE
Confidence 221112221111 134578899999999999999886 89999887 9999999888877877653 3334678999999
Q ss_pred ecCCcchhhhhhcCCC-CCCcc-cceeeE--EeccCCCCCCceEEEec---CCCcEEEEecCCCeEEEEEEeCCCCCCCC
Q 009994 212 CDGCFSNLRRSLCKPK-VDVPS-CFVGLV--LENCQLPFANHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPSI 284 (520)
Q Consensus 212 AdG~~S~vR~~l~~~~-~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 284 (520)
|||.+|.+|+.++.+. ..... ...++. ......+ ++...++++ +.++.|++|.+++...+.+....+.. .
T Consensus 157 A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~ 233 (397)
T 3cgv_A 157 ADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--H 233 (397)
T ss_dssp CCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--S
T ss_pred CCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--c
Confidence 9999999999998765 32221 222222 2222232 344455543 55788999999998777776654322 1
Q ss_pred CchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHH
Q 009994 285 SNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 364 (520)
Q Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~L 364 (520)
......+.+.+.+... +.+.. ..........+|.. ....+|..+|++++|||||.++|++|||+|.|++||..|
T Consensus 234 ~~~~~~~~l~~~~~~~--~~~~~---~~~~~~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~l 307 (397)
T 3cgv_A 234 NRFELKNYLDRFIENH--PGLKK---GQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYA 307 (397)
T ss_dssp CHHHHHHHHHHHHHTC--HHHHT---SEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhC--cCCCC---CeEEeeeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHH
Confidence 2234445555433211 11100 00001112334543 346678889999999999999999999999999999999
Q ss_pred HHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHHHHHHHHHh
Q 009994 365 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYLS 429 (520)
Q Consensus 365 a~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~~ 429 (520)
++.|..... .+...+..|+.|+++|++........+..+.+++..-++. ..+.+++.+.
T Consensus 308 a~~l~~~~~--~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 366 (397)
T 3cgv_A 308 AQVTKEAIE--SNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSDD----TLDKLVDIVS 366 (397)
T ss_dssp HHHHHHHHH--HTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH----HHHHHHHHHT
T ss_pred HHHHHHHHH--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH----HHHHHHHhcC
Confidence 999975421 1112357899999999998888888887777776544332 2344555544
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=7.6e-32 Score=287.22 Aligned_cols=344 Identities=17% Similarity=0.150 Sum_probs=224.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh------------CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhH--Hhhc
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGK------------DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDC--VEEI 118 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~------------~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~--l~~~ 118 (520)
..+||+|||||++|+++|+.|++ .|++|+|||+... +....|+.+.|++.+.|+++|+.+. +...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~-~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~ 84 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV-ATIGVGEGTWPSMRSTLSKIGIDENDFIRQC 84 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC-CCCCSCEECCTHHHHHHHHHTCCHHHHHHHT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC-CCcceeeechHhHHHHHHHcCCCHHHHHHHc
Confidence 45799999999999999999999 9999999999754 3344588999999999999999986 5554
Q ss_pred ccceeceEEEEE--C--------------C--cc-ccccCC---C------------------------------cCC-C
Q 009994 119 DAQQVLGYALFK--D--------------G--KS-TRLSYP---L------------------------------EKF-H 145 (520)
Q Consensus 119 ~~~~~~~~~~~~--~--------------~--~~-~~~~~~---~------------------------------~~~-~ 145 (520)
......+..+.. . + .. ....+. . ..+ .
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~ 164 (526)
T 2pyx_A 85 DASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHF 164 (526)
T ss_dssp TCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCC
T ss_pred CCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCC
Confidence 333233332221 0 0 00 000000 0 000 1
Q ss_pred CCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchh-hhhhc
Q 009994 146 ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRSLC 224 (520)
Q Consensus 146 ~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~v-R~~l~ 224 (520)
....++.++|..|.+.|++.+++..|+++++++|+++..++++.. +.+...+|++ ++||+||+|||.+|.+ |+.++
T Consensus 165 ~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~-~~v~~~~g~~--i~ad~vV~AdG~~S~~~~~~lg 241 (526)
T 2pyx_A 165 QNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDI-EKLITKQNGE--ISGQLFIDCTGAKSLLLGEHLQ 241 (526)
T ss_dssp SSCCEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCE-EEEEESSSCE--EECSEEEECSGGGCCCCCCCTC
T ss_pred CCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcE-EEEEECCCCE--EEcCEEEECCCcchHHHHHHhC
Confidence 123457889999999999999883389999989999987654321 3444566664 6799999999999999 67776
Q ss_pred CCCCCCcc---cceeeEEe-ccCC---CCCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHhc
Q 009994 225 KPKVDVPS---CFVGLVLE-NCQL---PFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMV 297 (520)
Q Consensus 225 ~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 297 (520)
.+...... ...++... .... +..........+.++++++|..++. ...+.+.... .+.++..+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~~---~~~~~~~~~l~~~l 317 (526)
T 2pyx_A 242 VPFLSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSSH---TNDIDAQKTLFNYL 317 (526)
T ss_dssp CCEEECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTTT---CCHHHHHHHHHHHH
T ss_pred CCcccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCCC---CChHHHHHHHHHHH
Confidence 54322111 11222221 1111 1122223334566788999998743 3333222221 23345566666555
Q ss_pred CCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCCh
Q 009994 298 APQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDA 377 (520)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~ 377 (520)
... .+ .+. ......++.......+|..|||+|+|||||.++|++|||+|+|++||..|++.|.. ..
T Consensus 318 ~~~-~~----~l~----~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~-----~~ 383 (526)
T 2pyx_A 318 GVD-GA----AAD----KLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP-----NR 383 (526)
T ss_dssp TCC-HH----HHH----HCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS-----CH
T ss_pred Hhc-Cc----ccc----cCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh-----cC
Confidence 322 11 111 12233444444446677789999999999999999999999999999999999963 23
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHH
Q 009994 378 ASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARK 418 (520)
Q Consensus 378 ~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~ 418 (520)
...+.+++.|+++|+++...+.......|..-...++++..
T Consensus 384 ~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~ 424 (526)
T 2pyx_A 384 MVMDTISARVNERYQQHWQQIIDFLKLHYVISQRQEDRYWR 424 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 45678999999999999998888777766553333334433
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=6e-33 Score=283.97 Aligned_cols=315 Identities=16% Similarity=0.139 Sum_probs=201.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCch-hH-HhhcccceeceEEEEE
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLE-DC-VEEIDAQQVLGYALFK 130 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~-~~-l~~~~~~~~~~~~~~~ 130 (520)
.||+||||||+||++|+.|+++ |++|+|+||.+.......+..+++++++.+...++. +. +... ........++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLN-PQFLEDFKLVH 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGC-CEEECCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHh-hccccceEEEe
Confidence 3899999999999999999999 999999999976655667778888887733223343 33 3221 12233444444
Q ss_pred CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
.|... .. . .......++|..|.+.|.+.+.+. |+++++++ |+++.+.. +++||+|
T Consensus 80 ~g~~~--~~---~--~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~----------------~~~ad~v 135 (381)
T 3c4a_A 80 HNEPS--LM---S--TGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGELP----------------LADYDLV 135 (381)
T ss_dssp SSSEE--EC---C--CCSCEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGCC----------------GGGCSEE
T ss_pred CCeeE--Ee---c--CCCceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhcc----------------cccCCEE
Confidence 44321 11 0 112335789999999999999987 89999987 77664310 1459999
Q ss_pred EEecCCcchhhhhhcCCC-CCCc--ccceeeEEeccCCCCCCceEEE--ecCCCcEE--EEecCCCeEEEEEEeCC----
Q 009994 210 IVCDGCFSNLRRSLCKPK-VDVP--SCFVGLVLENCQLPFANHGHVI--LADPSPIL--FYPISSTEVRCLVDVPG---- 278 (520)
Q Consensus 210 V~AdG~~S~vR~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~p~~~~~~~~~~~~~~---- 278 (520)
|+|||.+|. |+.+.... .... .....+... ....+. ...+ ..+.++++ ++|++++...+.+..+.
T Consensus 136 V~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~ 211 (381)
T 3c4a_A 136 VLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGT--SQLFDQ-MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYA 211 (381)
T ss_dssp EECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEE--SSCCSS-EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHH
T ss_pred EECCCCCch-HHhhhhhcCCCcccCCccEEEEec--CCCCCc-ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccc
Confidence 999999999 99873210 1111 111112111 111111 1222 23445443 68998876554444321
Q ss_pred -CCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeEEecCC-CCCCCCCCCCcEEEEccCCCCCCCCCCchhhH
Q 009994 279 -QKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNR-SMPADPQPTPGALLMGDAFNMRHPLTGGGMTV 356 (520)
Q Consensus 279 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~ 356 (520)
...+..+.++..+.+.+.+....+. . +.+.... ..|+.. ..+..+|..|||+|+|||||.++|++|||+|+
T Consensus 212 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~-----~l~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 284 (381)
T 3c4a_A 212 RARLGEMSEEASAEYVAKVFQAELGG-H-----GLVSQPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTM 284 (381)
T ss_dssp HTTSSSSCHHHHHHHHHHHTHHHHTT-C-----CCBCCTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHH
T ss_pred cCCcccCChHHHHHHHHHHhcccCCC-c-----hhhcCCC-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHH
Confidence 1223334445555555433211110 0 0011111 012222 23467888999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcC
Q 009994 357 ALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSS 411 (520)
Q Consensus 357 al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~ 411 (520)
||+||.+|+++|... .+.+.+|+.|+++|++++..++..++.+.+++..
T Consensus 285 al~Da~~La~~L~~~------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 285 AVVVAQLLVKALCTE------DGVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp HHHHHHHHHHHHHHS------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 999999999999763 1357899999999999999999999888765543
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=3e-30 Score=277.33 Aligned_cols=344 Identities=17% Similarity=0.160 Sum_probs=209.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC------CCeEEEEccCCCCCCc-eeeeeeccchHHHHHhcCchhHHhh-ccc-ce
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKD------GRRVHVIERDVTEPDR-IVGELLQPGGYLKLVELGLEDCVEE-IDA-QQ 122 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~v~Er~~~~~~~-~~g~~l~~~~~~~l~~lGl~~~l~~-~~~-~~ 122 (520)
.+++||+||||||+||++|+.|+++ |++|+|+||....... ..|..+.+++++.| ++-+..... ... ..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~~~~g~~~~~~~~ 110 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDWKEKGAPLNTPVT 110 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTHHHHTCCCCEECC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHHHhcCCceeeeec
Confidence 3468999999999999999999999 9999999998755433 45667888877665 221111000 000 00
Q ss_pred eceEEEEECCccccccCCC-cC-CCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEe--
Q 009994 123 VLGYALFKDGKSTRLSYPL-EK-FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKT-- 196 (520)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~gv~v~~-- 196 (520)
...+.+...... ..++. .. ......++.++|..|.+.|.+.+++. |++++.++ |+++..++ +.+.+|+..+
T Consensus 111 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g 187 (584)
T 2gmh_A 111 EDRFGILTEKYR--IPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEILFHEDGSVKGIATNDVG 187 (584)
T ss_dssp EEEEEEECSSCE--EECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEEECTTSSEEEEEECCEE
T ss_pred hhheeeeccCCC--ccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCCCEEEEEeCCcc
Confidence 112222222211 12221 00 01122357889999999999999987 89999997 99998775 5566676642
Q ss_pred --CCCcE-------EEEecCeEEEecCCcchhhhhh----cCCCCCCcc-cceeeE-Eecc--CCCCCCceEEEecC---
Q 009994 197 --KDGQE-------LRAYAPLTIVCDGCFSNLRRSL----CKPKVDVPS-CFVGLV-LENC--QLPFANHGHVILAD--- 256 (520)
Q Consensus 197 --~~g~~-------~~~~ad~vV~AdG~~S~vR~~l----~~~~~~~~~-~~~~~~-~~~~--~~~~~~~~~~~~~~--- 256 (520)
.+|+. .+++||+||+|||.+|.+|+.+ ++....... ...++. +... ....+.....+++.
T Consensus 188 ~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~ 267 (584)
T 2gmh_A 188 IQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLD 267 (584)
T ss_dssp ECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSC
T ss_pred ccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEecccc
Confidence 35532 3578999999999999999987 443211111 111221 1111 11122232333321
Q ss_pred ---CCcEEEEecC--CCeEEEEEEeCCCCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCeE------EecCCC
Q 009994 257 ---PSPILFYPIS--STEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIR------TMPNRS 325 (520)
Q Consensus 257 ---~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~------~~~~~~ 325 (520)
.+..++||.. ++..++.+....+....... ..+.+.++.. .+.+.+.+ +.+.+. .++...
T Consensus 268 ~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~--~~~~l~~~~~---~p~i~~~l----~~~~~~~~~~~~~~~~~~ 338 (584)
T 2gmh_A 268 RHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS--PFREFQRWKH---HPSIKPTL----EGGKRIAYGARALNEGGF 338 (584)
T ss_dssp TTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCC--HHHHHHHHTT---STTTHHHH----TTCEEEEEEEEEEECCGG
T ss_pred CCcCCceEEEEecCCCCeEEEEEEEecCcccccCC--hHHHHHHHHh---ChHHHHHh----CCCeEEEecceEccCCCc
Confidence 2345788888 67777777654332211111 2233333322 12333322 112221 122333
Q ss_pred CCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHH---HHHHHHhhcch-hHHHHHH
Q 009994 326 MPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRY---LESFYTLRKPV-ASTINTL 401 (520)
Q Consensus 326 ~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~---L~~Y~~~R~~~-~~~~~~~ 401 (520)
....+|..+|++|+|||||.++|++|||+|+||+||.+||++|..+...++. ..+++ |+.|+++|++. .......
T Consensus 339 ~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-~~~~a~~~L~~Ye~~r~~~~v~~~l~~ 417 (584)
T 2gmh_A 339 QSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-QSKTIGLHVTEYEDNLKNSWVWKELYS 417 (584)
T ss_dssp GGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-CCSSSSCCCTHHHHHHHTSHHHHHHHH
T ss_pred ccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhhhHHHHHHHHHHhHHHHHHHH
Confidence 3456788899999999999999999999999999999999999865321110 01233 89999999987 5666666
Q ss_pred HHHHHhhhc
Q 009994 402 AGALYKVFS 410 (520)
Q Consensus 402 a~~~~~~~~ 410 (520)
++.+..+|.
T Consensus 418 ~r~~~~~~~ 426 (584)
T 2gmh_A 418 VRNIRPSCH 426 (584)
T ss_dssp TTTTTGGGG
T ss_pred HhChhHHHH
Confidence 666666664
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=7.8e-30 Score=271.00 Aligned_cols=340 Identities=16% Similarity=0.076 Sum_probs=216.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhH--HhhcccceeceEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDC--VEEIDAQQVLGYAL 128 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~--l~~~~~~~~~~~~~ 128 (520)
.+||+|||||++|+++|+.|++ .|++|+||||.. .+....|+.+.+...+.++.+|+.+. +.........+..+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~-~~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~ 80 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN-VRRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRF 80 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC-CCceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEecccee
Confidence 4699999999999999999999 999999999975 33345677888999999999999875 54433222122111
Q ss_pred -----------EECCc-------cc----------c-------------ccCC-------CcCC----C-----------
Q 009994 129 -----------FKDGK-------ST----------R-------------LSYP-------LEKF----H----------- 145 (520)
Q Consensus 129 -----------~~~~~-------~~----------~-------------~~~~-------~~~~----~----------- 145 (520)
...+. .. . ..+. ...+ .
T Consensus 81 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 160 (511)
T 2weu_A 81 ENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQ 160 (511)
T ss_dssp ESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGC
T ss_pred cCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccC
Confidence 11110 00 0 0000 0011 1
Q ss_pred C--CccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEecCeEEEecCCcchhhh-
Q 009994 146 A--DVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENG-TIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRR- 221 (520)
Q Consensus 146 ~--~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~-~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~- 221 (520)
. ...++.+++..|.+.|.+.+.+. |+++++++|+++..+++ .+. .+...+|+ +++||+||+|||.+|.+|+
T Consensus 161 ~~~~~~~~~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~--~v~~~~g~--~~~ad~vV~A~G~~S~~~~~ 235 (511)
T 2weu_A 161 RAQFPYAYHFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWIS--GVHTKQHG--EISGDLFVDCTGFRGLLINQ 235 (511)
T ss_dssp CSCCSCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEE--EEEESSSC--EEECSEEEECCGGGCCCCCC
T ss_pred cCCCCeeEEEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEE--EEEECCCC--EEEcCEEEECCCcchHHHHH
Confidence 1 33467899999999999999886 79998889999987544 333 34456776 4679999999999999954
Q ss_pred hhcCCCCC---CcccceeeEEe-ccCCC--CCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHH
Q 009994 222 SLCKPKVD---VPSCFVGLVLE-NCQLP--FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKA 295 (520)
Q Consensus 222 ~l~~~~~~---~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (520)
.++.+... ......++... ....+ ..........+.++++++|..+ ...+.+....+ ..+.++..+.+.+
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~---~~~~~~~~~~l~~ 311 (511)
T 2weu_A 236 TLGGRFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE---FISPEEAERELRS 311 (511)
T ss_dssp CTCCCEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT---TSCHHHHHHHHHH
T ss_pred HhCCCCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC---CCCHHHHHHHHHH
Confidence 55554211 11111222211 11111 1222334456677889999987 34444333322 2234555556665
Q ss_pred hcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCC
Q 009994 296 MVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFN 375 (520)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~ 375 (520)
.+.. .| .+ . .....+.......++..+|++|+|||||.++|++|||+|+|++||..|++.|...
T Consensus 312 ~~~~-~~-~~--------~--~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~---- 375 (511)
T 2weu_A 312 TVAP-GR-DD--------L--EANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE---- 375 (511)
T ss_dssp HHCT-TC-TT--------S--CCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT----
T ss_pred HhCc-cc-cc--------c--cceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC----
Confidence 5431 11 11 1 1122233333345666899999999999999999999999999999999999741
Q ss_pred ChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHHHHH
Q 009994 376 DAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMR 421 (520)
Q Consensus 376 ~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~~lr 421 (520)
...+.+++.|+++|+++...+..+....|.+....+.+.....+
T Consensus 376 --~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~~~~ 419 (511)
T 2weu_A 376 --RWDPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWKAAK 419 (511)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHhcc
Confidence 12357899999999999999888887777766544445544433
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=8.2e-30 Score=272.35 Aligned_cols=336 Identities=16% Similarity=0.118 Sum_probs=214.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCCCCceeeeeeccchHH-HHHhcCchhH--HhhcccceeceE
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVGELLQPGGYL-KLVELGLEDC--VEEIDAQQVLGY 126 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~--l~~~~~~~~~~~ 126 (520)
..+||+|||||++|+++|+.|++ .|++|+|||+... +....|..+.+.+.+ .++.+|+.+. +.........+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~ 82 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI-PRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAI 82 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS-CCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC-CCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCc
Confidence 35799999999999999999999 9999999999753 334447888899999 9999999864 443222111111
Q ss_pred EE----------------EECCccc-----cc------------cCC---------------C------cCCCCCcccee
Q 009994 127 AL----------------FKDGKST-----RL------------SYP---------------L------EKFHADVSGRS 152 (520)
Q Consensus 127 ~~----------------~~~~~~~-----~~------------~~~---------------~------~~~~~~~~~~~ 152 (520)
.+ ...|... .. ... . ..+ ..+.++.
T Consensus 83 ~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~ 161 (538)
T 2aqj_A 83 KFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTR-QMSHAWH 161 (538)
T ss_dssp EEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCB-CSCCEEE
T ss_pred cccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCc-CCCccEE
Confidence 11 1111000 00 000 0 000 1234578
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEecCeEEEecCCcchhhh-hhcCCCCCC
Q 009994 153 FHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENG-TIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRR-SLCKPKVDV 230 (520)
Q Consensus 153 ~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~-~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~-~l~~~~~~~ 230 (520)
+++..+.+.|.+.+.+. |++++.++|+++..+++ .+. .+...+|+ +++||+||+|||.+|.+|+ .++.+....
T Consensus 162 i~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~--~v~~~~g~--~i~ad~vV~A~G~~s~~~~~~lg~~~~~~ 236 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYIS--NLLTKEGR--TLEADLFIDCSGMRGLLINQALKEPFIDM 236 (538)
T ss_dssp ECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEE--EEEETTSC--EECCSEEEECCGGGCCCCCCCTCCCEEEC
T ss_pred EeHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEE--EEEECCCc--EEEeCEEEECCCCchhhHHHHhCCCcccc
Confidence 99999999999999886 89998889999987544 333 34456675 4679999999999999955 445432111
Q ss_pred c---ccceeeEEe-ccCCC---CCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHhcCCCCCh
Q 009994 231 P---SCFVGLVLE-NCQLP---FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQVPP 303 (520)
Q Consensus 231 ~---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 303 (520)
. ....++... ....+ ..........+.++++++|..+. ..+.+.+... ..+.++..+.+++.+.. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~---~~~~~~~~~~l~~~~~~--~- 309 (538)
T 2aqj_A 237 SDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH---FTSRDQATADFLKLWGL--S- 309 (538)
T ss_dssp TTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT---TSCHHHHHHHHHHHHTC--C-
T ss_pred ccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC---CCChHHHHHHHHHHhcC--C-
Confidence 1 111222221 11101 11222334556678899999874 3333333221 12344555666655432 1
Q ss_pred hhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHH
Q 009994 304 ELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRY 383 (520)
Q Consensus 304 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~ 383 (520)
.+ .....++.......++..|||+|+|||||.++|++|||+|+|++||..|++.|... ...+.+
T Consensus 310 ~~----------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~------~~~~~~ 373 (538)
T 2aqj_A 310 DN----------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT------SFDPRL 373 (538)
T ss_dssp TT----------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT------TCCHHH
T ss_pred CC----------CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc------CCCHHH
Confidence 11 11223344333456677899999999999999999999999999999999999731 123568
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHH
Q 009994 384 LESFYTLRKPVASTINTLAGALYKVFSSSPDQARK 418 (520)
Q Consensus 384 L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~ 418 (520)
|+.|+++|+++...+.......|..-...++++..
T Consensus 374 l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~ 408 (538)
T 2aqj_A 374 SDAFNAEIVHMFDDCRDFVQAHYFTTSRDDTPFWL 408 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHH
Confidence 99999999999888877666666543333334433
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=1.3e-29 Score=271.34 Aligned_cols=339 Identities=15% Similarity=0.128 Sum_probs=217.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCCCCceeeeeeccchHH-HHHhcCchhH--HhhcccceeceE
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVGELLQPGGYL-KLVELGLEDC--VEEIDAQQVLGY 126 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~~~~~~g~~l~~~~~~-~l~~lGl~~~--l~~~~~~~~~~~ 126 (520)
..+||+|||||++|+++|+.|++ .|++|+|||+... +....|+.+.|.+.+ +++.+|+.+. +.........+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~-~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~ 102 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI-PTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAI 102 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC-CCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC-CccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEee
Confidence 46899999999999999999999 9999999999753 334457889999999 9999999865 554322211222
Q ss_pred EEE------------------------ECCcc---------------------c-c---ccC---CCcCCC---------
Q 009994 127 ALF------------------------KDGKS---------------------T-R---LSY---PLEKFH--------- 145 (520)
Q Consensus 127 ~~~------------------------~~~~~---------------------~-~---~~~---~~~~~~--------- 145 (520)
.+. ..+.. . . ..+ +..+..
T Consensus 103 ~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (550)
T 2e4g_A 103 KFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGS 182 (550)
T ss_dssp EEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSC
T ss_pred eEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCC
Confidence 111 00100 0 0 000 000000
Q ss_pred -CCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEecCeEEEecCCcchh-hhh
Q 009994 146 -ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENG-TIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRS 222 (520)
Q Consensus 146 -~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~-~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~v-R~~ 222 (520)
....++.+++..+.+.|.+.+++.+|+++++++|+++..+++ .+. .+...+|+ +++||+||+|||.+|.+ ++.
T Consensus 183 ~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~--~v~~~~G~--~i~ad~vI~A~G~~S~~~~~~ 258 (550)
T 2e4g_A 183 KVTNYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIE--SVRTATGR--VFDADLFVDCSGFRGLLINKA 258 (550)
T ss_dssp BCSCCEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEE--EEEETTSC--EEECSEEEECCGGGCCCCCCC
T ss_pred CCCCcceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEE--EEEECCCC--EEECCEEEECCCCchhhHHHH
Confidence 123456789999999999999886579998889999987543 333 34456675 36699999999999999 566
Q ss_pred hcCCCCCCc---ccceeeEEe-ccCCC---CCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHH
Q 009994 223 LCKPKVDVP---SCFVGLVLE-NCQLP---FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKA 295 (520)
Q Consensus 223 l~~~~~~~~---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (520)
++....... .....+... ....+ ..........+.++++++|..+. ..+.+..... ..+.++..+.+.+
T Consensus 259 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~---~~~~~~~~~~l~~ 334 (550)
T 2e4g_A 259 MEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR---FATEDEAVREFCE 334 (550)
T ss_dssp TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT---TSCHHHHHHHHHH
T ss_pred hCCCcccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC---CCChHHHHHHHHH
Confidence 665422111 111222211 11111 11222333446678889998763 3333333221 1234556666666
Q ss_pred hcCCCCChhhHHHHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCC
Q 009994 296 MVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFN 375 (520)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~ 375 (520)
.+... | .+ . .....+.......++..+|++++|||||.++|++|||+|+|++||..|++.|...
T Consensus 335 ~~~~~-p-~l--------~--~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~---- 398 (550)
T 2e4g_A 335 MWHLD-P-ET--------Q--PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK---- 398 (550)
T ss_dssp HTTCC-T-TT--------S--CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT----
T ss_pred hhCcC-c-cc--------C--CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc----
Confidence 55321 1 11 1 1112233333345567899999999999999999999999999999999999741
Q ss_pred ChHHHHHHHHHHHHhhcchhHHHHHHHHHHHhhhcCCChhHHH
Q 009994 376 DAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARK 418 (520)
Q Consensus 376 ~~~~~~~~L~~Y~~~R~~~~~~~~~~a~~~~~~~~~~~~~~~~ 418 (520)
...+.++++|+++|++....+..+....|.+-...+.++..
T Consensus 399 --~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~~r~~~~fw~ 439 (550)
T 2e4g_A 399 --SLNPVLTARFNREIETMFDDTRDFIQAHFYFSPRTDTPFWR 439 (550)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 22457999999999999999988888777764433334443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=2.9e-26 Score=238.00 Aligned_cols=322 Identities=14% Similarity=0.127 Sum_probs=178.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC---ceee-eeeccchHHHHHhcCchhHHhhcccceeceEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD---RIVG-ELLQPGGYLKLVELGLEDCVEEIDAQQVLGYA 127 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~---~~~g-~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 127 (520)
.+..||+||||||+||++|+.|+++|++|+|+||.+.+.. +..+ ..+...++..++.+|+..-... .....+..
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~--~~~~~~~~ 97 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE--EFGYFGHY 97 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH--HHCEEEEE
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh--ccccccee
Confidence 3457999999999999999999999999999999863211 1111 2234456677777765321111 11223333
Q ss_pred EEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceE--EEEEeeCCeEEEEEEEeCCCcEEEEe
Q 009994 128 LFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTV--TSLLEENGTIKGVQYKTKDGQELRAY 205 (520)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v--~~~~~~~~~v~gv~v~~~~g~~~~~~ 205 (520)
+...+.. ...+.. . ....+..+.+..+...|.+.+++. |++++..++ .++. .....
T Consensus 98 ~~~~~~~-~~~~~~-~--~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l~-----------------~~~~~ 155 (430)
T 3ihm_A 98 YYVGGPQ-PMRFYG-D--LKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDLE-----------------GLSEQ 155 (430)
T ss_dssp EEECSSS-CEEEEE-E--EEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGHH-----------------HHHTT
T ss_pred EEECCCC-ccccch-h--cCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhhh-----------------hhccc
Confidence 3332221 111110 0 122446788899999999999887 677765331 1110 00124
Q ss_pred cCeEEEecCCcchhhhhhcCCC---CCCcccceeeE-EeccCCCCC-CceEEEecCCCcEEEEecCC--CeEEEEE--Ee
Q 009994 206 APLTIVCDGCFSNLRRSLCKPK---VDVPSCFVGLV-LENCQLPFA-NHGHVILADPSPILFYPISS--TEVRCLV--DV 276 (520)
Q Consensus 206 ad~vV~AdG~~S~vR~~l~~~~---~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~--~~~~~~~--~~ 276 (520)
+|+||+|||.+|.+|....... ...+....... +.....+.+ .....++...+.++++|... +...+.+ ..
T Consensus 156 ad~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~ 235 (430)
T 3ihm_A 156 YDLLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENH 235 (430)
T ss_dssp SSEEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEec
Confidence 8999999999998874332111 11111222221 111111221 12233444556777788532 3333332 23
Q ss_pred CCCCCC---C----CCchHHHHHHHHhcCCCCChhhHHHHHHhhh------cCCe---EEecCCCCCCCCCCCCcEEE-E
Q 009994 277 PGQKVP---S----ISNGEMANYLKAMVAPQVPPELHEAFVSAVE------RGNI---RTMPNRSMPADPQPTPGALL-M 339 (520)
Q Consensus 277 ~~~~~~---~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~i---~~~~~~~~~~~~~~~grv~L-v 339 (520)
+..... . .++++..+.+.+.+.+.. +.+.+.+ ...+ ...+ ..++....+..+|..||++| +
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 313 (430)
T 3ihm_A 236 IGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHH-PSVAERI-DPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGL 313 (430)
T ss_dssp TTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHC-HHHHTTB-CTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEEC
T ss_pred CCCcHHHhccccCCCCHHHHHHHHHHHHHHhC-ccHHHHH-hhchhccccCccceeecceeecccccccccCCCCEEEEe
Confidence 322211 1 133433334433332211 1211111 1111 1111 12333334556788899888 9
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhc-chhHHHHHHHHHH
Q 009994 340 GDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRK-PVASTINTLAGAL 405 (520)
Q Consensus 340 GDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~a~~~ 405 (520)
|||||.++|++|||+|+||+||.+|+++|.... + .+++|.+|+.+|+ .++......++.+
T Consensus 314 GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~---~---~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 314 GDIQATVDPVLGQGANMASYAAWILGEEILAHS---V---YDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp GGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCS---C---CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccCCCchhhhHHHHHHHHHHHHHHHHhcC---C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998752 1 4579999999998 5555555555443
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.92 E-value=1.8e-25 Score=235.86 Aligned_cols=308 Identities=15% Similarity=0.089 Sum_probs=179.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
...+||+|||||++|+++|+.|++.|++|+|+||.+... +.....+.+.+++.|+.+|+.+....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g-~~~~~~~~~~~~~~l~~~g~~~~~~~-------------- 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFS-RHNVLHLWPFTIHDLRALGAKKFYGR-------------- 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCC-CCCEEECCHHHHHHHHTTTHHHHCTT--------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccC-CCCcccCChhHHHHHHHcCCcccccc--------------
Confidence 456899999999999999999999999999999986543 23445577888889998887643211
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEeC-CCcEEEEecC
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKTK-DGQELRAYAP 207 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~--~~~v~gv~v~~~-~g~~~~~~ad 207 (520)
+.. .....+++..+.+.|.+.+++. +++++.++ |+++..+ ++....|++... +|+..+++||
T Consensus 155 -------~~~------~~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad 220 (497)
T 2bry_A 155 -------FCT------GTLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD 220 (497)
T ss_dssp -------TTC------TTCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS
T ss_pred -------ccc------cccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC
Confidence 000 0112467788999999999885 89999987 9999864 233344655544 6633346799
Q ss_pred eEEEecCCcchhhhhhcCCCCCCcc-cceeeEEec-----cCCCCCCceEEEecC----------CC-cE-EEEecCCCe
Q 009994 208 LTIVCDGCFSNLRRSLCKPKVDVPS-CFVGLVLEN-----CQLPFANHGHVILAD----------PS-PI-LFYPISSTE 269 (520)
Q Consensus 208 ~vV~AdG~~S~vR~~l~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~-~~-~~~p~~~~~ 269 (520)
+||+|||.+|.+|+..++...+... ......+.. ..++ +..+..+..+ .+ +. .++|..++.
T Consensus 221 ~VV~A~G~~S~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~-~~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~ 299 (497)
T 2bry_A 221 VLISAAGGKFVPEGFTIREMRGKLAIGITANFVNGRTVEETQVP-EISGVARIYNQKFFQSLLKATGIDLENIVYYKDET 299 (497)
T ss_dssp EEEECCCTTCCCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSC-CBCC----CCSSHHHHHHHHHCCCEEEEEEEESSE
T ss_pred EEEECCCCCcccccccchhhcCceeEeeeeeeeeeccccccchh-hcCceEEecChhhhHhHHhhcCCCcccccccCCCe
Confidence 9999999999999877654333221 111111100 0011 0111111111 01 11 134444444
Q ss_pred EEEEEEeCC-----C-----CCC---------CCCchHHHHHH---HHhcCCCCChhhH---HHHHH---hh-hcCCeEE
Q 009994 270 VRCLVDVPG-----Q-----KVP---------SISNGEMANYL---KAMVAPQVPPELH---EAFVS---AV-ERGNIRT 320 (520)
Q Consensus 270 ~~~~~~~~~-----~-----~~~---------~~~~~~~~~~l---~~~~~~~~~~~~~---~~~~~---~~-~~~~i~~ 320 (520)
..+...... . ..+ ..+.+++..+- .+...+...+.+. ..+.. .+ +......
T Consensus 300 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 379 (497)
T 2bry_A 300 HYFVMTAKKQCLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMR 379 (497)
T ss_dssp EEEEEEECHHHHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEE
T ss_pred EEEEeccccccccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhccccchhhhhccCCCCCceeeeEEEEe
Confidence 333332110 0 000 01111111110 0000000000000 00000 00 1223446
Q ss_pred ecCCCCCCCCCCCCc-EEEEccCCC-CCCCCCCchhhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHhhcchhHH
Q 009994 321 MPNRSMPADPQPTPG-ALLMGDAFN-MRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVAST 397 (520)
Q Consensus 321 ~~~~~~~~~~~~~gr-v~LvGDAAh-~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~L~~Y~~~R~~~~~~ 397 (520)
|+...+.+++|.+|| ++|+|||+| .+.| .|||+|+||+||.+|+|+|+.+. .+.+...+| .+|++.+..
T Consensus 380 ~~~~~r~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~---~g~~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 380 AESSARVQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWA---EGAGPLEVL----AERESLYQL 450 (497)
T ss_dssp ESCSEEEEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHH---TTCCHHHHH----HHHHHHHTT
T ss_pred cchhhHHHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHh---CCCCccchh----hhHHHHhhh
Confidence 777777788999998 999999999 4455 99999999999999999998763 222334455 777776543
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.76 E-value=1.4e-17 Score=166.44 Aligned_cols=293 Identities=12% Similarity=0.104 Sum_probs=143.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeee------------eeccchHHHHHhcCchhHHhhcccc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGE------------LLQPGGYLKLVELGLEDCVEEIDAQ 121 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~------------~l~~~~~~~l~~lGl~~~l~~~~~~ 121 (520)
++||+|||||++|+++|+.|+++|++|+|+||.+....+.... .+........+.+..+... .....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ-GHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH-TSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC-CCeee
Confidence 4699999999999999999999999999999986543221111 1111111121111111100 00000
Q ss_pred eeceEEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc
Q 009994 122 QVLGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQ 200 (520)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~ 200 (520)
....+.....+.. ... ..... ....+..+.. |.+.+.+ ++++++++ |+++..++++ +++.+.+|+
T Consensus 81 ~~~~~~~~~~~~~-----~~~--~~~~~-~~~~~~~~~~-l~~~l~~--g~~i~~~~~v~~i~~~~~~---~~v~~~~g~ 146 (336)
T 1yvv_A 81 WTPLLYNFHAGRL-----SPS--PDEQV-RWVGKPGMSA-ITRAMRG--DMPVSFSCRITEVFRGEEH---WNLLDAEGQ 146 (336)
T ss_dssp ECCCEEEESSSBC-----CCC--CTTSC-EEEESSCTHH-HHHHHHT--TCCEECSCCEEEEEECSSC---EEEEETTSC
T ss_pred ccccceeccCccc-----ccC--CCCCc-cEEcCccHHH-HHHHHHc--cCcEEecCEEEEEEEeCCE---EEEEeCCCc
Confidence 1111111111110 000 00111 1112222222 3333333 67888887 9999887774 556677786
Q ss_pred EEEEecCeEEEecCCcchhhhhhcCC-------CCCCcccceeeEEeccCCCCCCceEEEecCCCcEEEE------ecCC
Q 009994 201 ELRAYAPLTIVCDGCFSNLRRSLCKP-------KVDVPSCFVGLVLENCQLPFANHGHVILADPSPILFY------PISS 267 (520)
Q Consensus 201 ~~~~~ad~vV~AdG~~S~vR~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~ 267 (520)
. ..+||+||+|||.+|.+|.....+ ...........+........+..+ .+ .+.++..++ |..+
T Consensus 147 ~-~~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~p~~~ 223 (336)
T 1yvv_A 147 N-HGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPMQG-CF-VQDSPLDWLARNRSKPERD 223 (336)
T ss_dssp E-EEEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCCCE-EE-ECSSSEEEEEEGGGSTTCC
T ss_pred C-ccccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCCCe-EE-eCCCceeEEEecCcCCCCC
Confidence 3 335899999999999988653321 111111111111111122112122 22 234444333 3333
Q ss_pred Ce-EEEEEEeCC---CCCCCCCchHHHHHHHHhcCCCCChhhHHHHHHhhhcCCe-EEecCCCCCCCCC--CCCcEEEEc
Q 009994 268 TE-VRCLVDVPG---QKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNI-RTMPNRSMPADPQ--PTPGALLMG 340 (520)
Q Consensus 268 ~~-~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~--~~grv~LvG 340 (520)
+. ..+++.... ......+.++..+.+.+.+...+....... ......+. ..++......... ..+|++|+|
T Consensus 224 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p--~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laG 301 (336)
T 1yvv_A 224 DTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAP--VFSLAHRWLYARPAGAHEWGALSDADLGIYVCG 301 (336)
T ss_dssp CSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCC--SEEEEEEEEEEEESSCCCCSCEEETTTTEEECC
T ss_pred CCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCC--cEEEccccCccCCCCCCCCCeeecCCCCEEEEe
Confidence 32 455555431 112234445555544443332222111000 00000011 1223333222222 348999999
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHhcCccC
Q 009994 341 DAFNMRHPLTGGGMTVALSDIVVLRNLLKPLH 372 (520)
Q Consensus 341 DAAh~~~P~~G~G~n~al~Da~~La~~L~~~~ 372 (520)
||+| |.|++.|+.|+..||+.|.+..
T Consensus 302 Da~~------g~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 302 DWCL------SGRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp GGGT------TSSHHHHHHHHHHHHHHHHHHT
T ss_pred cCCC------CCCHHHHHHHHHHHHHHHHHHh
Confidence 9996 4599999999999999987654
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.58 E-value=2.1e-14 Score=145.98 Aligned_cols=195 Identities=13% Similarity=0.101 Sum_probs=108.0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch-hhhhhcCCCC
Q 009994 151 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSLCKPKV 228 (520)
Q Consensus 151 ~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~-vR~~l~~~~~ 228 (520)
..++...+.+.|.+.+++. |++++.++ |+++..+++++ .+.+.+| +++||.||.|+|.+|. +.+.++...+
T Consensus 159 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~---~v~~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~ 231 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKML-GAEIFEHTPVLHVERDGEAL---FIKTPSG---DVWANHVVVASGVWSGMFFKQLGLNNA 231 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHT-TCEEETTCCCCEEECSSSSE---EEEETTE---EEEEEEEEECCGGGTHHHHHHTTCCCC
T ss_pred eEEcHHHHHHHHHHHHHHC-CCEEEcCCcEEEEEEECCEE---EEEcCCc---eEEcCEEEECCChhHHHHHHhcCCCCc
Confidence 3466678999999999887 79999886 99998777754 3445555 4679999999999986 7777764322
Q ss_pred CCcccceeeEEe-ccCCCCCCceEEEecCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHhcCCCCChhhHH
Q 009994 229 DVPSCFVGLVLE-NCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHE 307 (520)
Q Consensus 229 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 307 (520)
-.+ ..+..+. ....+... ..++.+ ..+++|..++...+..............++..+.+.+.+...+|. +..
T Consensus 232 ~~~--~~g~~~~~~~~~~~~~--~~~~~~--~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~-l~~ 304 (382)
T 1ryi_A 232 FLP--VKGECLSVWNDDIPLT--KTLYHD--HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPA-IQN 304 (382)
T ss_dssp CEE--EEEEEEEEECCSSCCC--SEEEET--TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGG-GGG
T ss_pred eec--cceEEEEECCCCCCcc--ceEEcC--CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCC-cCC
Confidence 111 2222221 11111111 122332 567788776644333321111111112222222332222212221 110
Q ss_pred HHHHhhhcCCeEEecCCCCCCCCCCCCcEEEEccCC-----CCCCCCCCchhhHHHHHHHHHHHhcCc
Q 009994 308 AFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVVLRNLLKP 370 (520)
Q Consensus 308 ~~~~~~~~~~i~~~~~~~~~~~~~~~grv~LvGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 370 (520)
. .....|.- ..++..++..++|++. +...+++|.|+..|..-+..+++.+..
T Consensus 305 -----~--~~~~~w~g----~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 305 -----M--KVDRFWAG----LRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp -----S--EEEEEEEE----EEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred -----C--ceeeEEEE----ecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 0 01111210 0112335566778763 345778999999999999999999874
No 32
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.54 E-value=1.8e-13 Score=144.40 Aligned_cols=213 Identities=14% Similarity=0.071 Sum_probs=110.7
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEecCCcch-hhhh-hcCCC
Q 009994 152 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSN-LRRS-LCKPK 227 (520)
Q Consensus 152 ~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~-vR~~-l~~~~ 227 (520)
.++..++...|.+.+.+. |++++.++ |+++..++ ++.+|++.+ .+|+..+++||.||.|+|.+|. +++. ++...
T Consensus 145 ~v~~~~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 367788999999999887 79999886 99998876 455677655 4676667889999999999985 5554 54321
Q ss_pred CCCcccceeeEEe-ccCCCCCCceEEEec-CCCcEEEEecCCCeEEEEEEe---CCCC-CCCCCchHHHHHHHHhcCCCC
Q 009994 228 VDVPSCFVGLVLE-NCQLPFANHGHVILA-DPSPILFYPISSTEVRCLVDV---PGQK-VPSISNGEMANYLKAMVAPQV 301 (520)
Q Consensus 228 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~l~~~~~~~~ 301 (520)
........+..+. ....+. ....++-. ++..++++|..++...+.... ..+. ....+.++. +++.+.....+
T Consensus 223 ~~~i~p~rG~~~~~~~~~~~-~~~~~~~~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 300 (501)
T 2qcu_A 223 PYGIRLIKGSHIVVPRVHTQ-KQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEI-NYLLNVYNTHF 300 (501)
T ss_dssp SSCBCCEEEEEEEEECSSSC-SCEEEEECTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHH-HHHHHHHHHHB
T ss_pred ccccccceeEEEEECCCCCC-ceEEEeecCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHHHHhc
Confidence 1111112222221 222222 22222322 334578889876643332211 1111 122233333 33332222122
Q ss_pred ChhhHHHHHHhh-hcCCeEEecCCCCC-CCCCCCCcEEE--EccCCCCCCCCCCchhhHHHHHHHHHHHhcCc
Q 009994 302 PPELHEAFVSAV-ERGNIRTMPNRSMP-ADPQPTPGALL--MGDAFNMRHPLTGGGMTVALSDIVVLRNLLKP 370 (520)
Q Consensus 302 ~~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~~grv~L--vGDAAh~~~P~~G~G~n~al~Da~~La~~L~~ 370 (520)
|..+... ... ....++.......+ ......+.++. .+|..|.+...+|.|++++-.=|..+++.+..
T Consensus 301 p~~l~~~--~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 301 KKQLSRD--DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp SSCCCGG--GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGG
T ss_pred CCCCCcc--cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHH
Confidence 2111000 000 00011111111111 11122355666 57777777778888999887777777666654
No 33
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.53 E-value=3.7e-13 Score=143.67 Aligned_cols=174 Identities=18% Similarity=0.231 Sum_probs=101.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc-eeeeeeccchHHHHHhcCch---hHHhh------cccc
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR-IVGELLQPGGYLKLVELGLE---DCVEE------IDAQ 121 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~-~~g~~l~~~~~~~l~~lGl~---~~l~~------~~~~ 121 (520)
+.++||+|||||++|+++|+.|+++|++|+|+||+...... .....+-.++.+.++...+. +.+.+ ....
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~ 95 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH 95 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch
Confidence 45699999999999999999999999999999998532211 11122223344444332211 11000 0000
Q ss_pred ---------ee------------ceEEEEE--CCc------------cccccCCCcCCCC-----CccceeecchHHHHH
Q 009994 122 ---------QV------------LGYALFK--DGK------------STRLSYPLEKFHA-----DVSGRSFHNGRFIQR 161 (520)
Q Consensus 122 ---------~~------------~~~~~~~--~~~------------~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~ 161 (520)
+. .+...+. .+. ......|...... ......++..++...
T Consensus 96 l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~ 175 (561)
T 3da1_A 96 VTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLE 175 (561)
T ss_dssp TCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHH
T ss_pred hccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHH
Confidence 00 0000000 000 0000111100000 001124667789999
Q ss_pred HHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEecCCcc-hhhhhhcCC
Q 009994 162 MREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS-NLRRSLCKP 226 (520)
Q Consensus 162 L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~~ 226 (520)
|.+.+.+. |++++.++ |+++..+++++.+|++.+ .+|+..+++||.||.|+|.+| .+++.++..
T Consensus 176 L~~~a~~~-G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVAR-GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHT-TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred HHHHHHHc-CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 99999887 78998877 999999999888898876 356666789999999999998 678877654
No 34
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.51 E-value=5.5e-13 Score=136.58 Aligned_cols=195 Identities=14% Similarity=0.102 Sum_probs=104.8
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc-hhhhhhcCCCCC
Q 009994 152 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKPKVD 229 (520)
Q Consensus 152 ~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~~~~~ 229 (520)
.++...+.+.|.+.+++. |++++.++ |+++..+++++.+|+ ..+| +++||.||.|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~--~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKDGEKVTGVK--TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEeCCEEEEEE--eCCc---eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 345567889999999887 79999987 999988777655444 4556 366999999999998 688888765422
Q ss_pred CcccceeeEEeccCCCCCCceEEEecCCCcEEEEecCCCeEEEEEEeCC-CCC-CCCCchHHHHHHHHhcCCCCChhhHH
Q 009994 230 VPSCFVGLVLENCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPG-QKV-PSISNGEMANYLKAMVAPQVPPELHE 307 (520)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~ 307 (520)
.......+... ..+.. ....+......+++.|..++...+...... ... ...+.+. .+.+.+.+...+| .+
T Consensus 244 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~p-~l-- 316 (405)
T 2gag_B 244 QSHPLQALVSE--LFEPV-HPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHV-IQEQMAAAVELFP-IF-- 316 (405)
T ss_dssp EEEEEEEEEEE--EBCSC-CCSEEEETTTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHH-HHHHHHHHHHHCG-GG--
T ss_pred cccceeEEEec--CCccc-cCceEEeCCCcEEEEEcCCCcEEEEeccCCCCccccCCCHHH-HHHHHHHHHHhCC-cc--
Confidence 22111111111 12111 111233344567778877776655544331 111 1222222 2222222211122 11
Q ss_pred HHHHhhhcCCe-EEecCCCCCCCCCCCCcEEEEccCC--C--CCCCCCCchhhHHHHHHHHHHHhcC
Q 009994 308 AFVSAVERGNI-RTMPNRSMPADPQPTPGALLMGDAF--N--MRHPLTGGGMTVALSDIVVLRNLLK 369 (520)
Q Consensus 308 ~~~~~~~~~~i-~~~~~~~~~~~~~~~grv~LvGDAA--h--~~~P~~G~G~n~al~Da~~La~~L~ 369 (520)
....+ ..|.- ..+...++..++|++. + ....++|.|+..|..-+..|++.+.
T Consensus 317 ------~~~~~~~~w~g----~~~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 317 ------ARAHVLRTWGG----IVDTTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp ------GGCEECEEEEE----EEEEETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHH
T ss_pred ------ccCCcceEEee----ccccCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHh
Confidence 10111 11110 0112346778889864 2 2233455677777777777777665
No 35
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.50 E-value=1.2e-12 Score=132.98 Aligned_cols=196 Identities=13% Similarity=0.083 Sum_probs=104.6
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc-hhhhhhcCC--C
Q 009994 152 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKP--K 227 (520)
Q Consensus 152 ~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~~--~ 227 (520)
.++...+.+.|.+.+++. |++++.++ |+++..+++++.+|+ +.+| +++||.||.|+|.+| .+.+.++.. .
T Consensus 145 ~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~v~gv~--~~~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~~ 218 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIENNEIKGVK--TNKG---IIKTGIVVNATNAWANLINAMAGIKTKI 218 (382)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTE---EEECSEEEECCGGGHHHHHHHHTCCSCC
T ss_pred eECHHHHHHHHHHHHHHC-CCEEECCceEEEEEEECCEEEEEE--ECCc---EEECCEEEECcchhHHHHHHHcCCCcCc
Confidence 466778999999999887 79999986 999998877655544 4555 467999999999998 567776654 2
Q ss_pred CCCcccceeeEEeccCCCCCCceEEEecCC-CcEEEEecCCCeEEEEE-EeC-CCCC-CCCCchHHHHHHHHhcCCCCCh
Q 009994 228 VDVPSCFVGLVLENCQLPFANHGHVILADP-SPILFYPISSTEVRCLV-DVP-GQKV-PSISNGEMANYLKAMVAPQVPP 303 (520)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~ 303 (520)
+-.+ ..+..+.....+.......++... ..+++.|..++ ..+.. ... .... ...+.+...+ +.+.+...+|
T Consensus 219 ~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~p- 293 (382)
T 1y56_B 219 PIEP--YKHQAVITQPIKRGTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLRE-VSYYFTKIIP- 293 (382)
T ss_dssp CCEE--EEEEEEEECCCSTTSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHH-HHHHHHHHCG-
T ss_pred CCCe--eEeEEEEEccCCcccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHH-HHHHHHHhCC-
Confidence 2111 222222111111111102233333 46677787665 33332 111 1111 1222222222 2222211122
Q ss_pred hhHHHHHHhhhcCCe-EEecCCCCCCCCCCCCcEEEEccCC-----CCCCCCCCchhhHHHHHHHHHHHhcCc
Q 009994 304 ELHEAFVSAVERGNI-RTMPNRSMPADPQPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVVLRNLLKP 370 (520)
Q Consensus 304 ~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~grv~LvGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 370 (520)
.+ ....+ ..|.- .+ +...++..++|... .....++|.|+..+..-+..+++.+..
T Consensus 294 ~l--------~~~~~~~~~~g-~r---~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 294 AL--------KNLLILRTWAG-YY---AKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp GG--------GGSEEEEEEEE-EE---EECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred Cc--------CCCCceEEEEe-cc---ccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 11 11111 11110 00 11124445566643 223457889999999999999998864
No 36
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.49 E-value=3.3e-13 Score=133.37 Aligned_cols=141 Identities=24% Similarity=0.280 Sum_probs=98.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCc-------eeeeeeccchHHHHHhcCchhHHhhccccee
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDR-------IVGELLQPGGYLKLVELGLEDCVEEIDAQQV 123 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~-------~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~ 123 (520)
.++||+|||||++|+++|+.|+++ |.+|+|+|+....... .....+.+...+.|+++|+.-. .
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~-------~- 149 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE-------D- 149 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE-------E-
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc-------c-
Confidence 468999999999999999999997 9999999998643211 1112233445566666665310 0
Q ss_pred ceEEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC----------------
Q 009994 124 LGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN---------------- 186 (520)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~---------------- 186 (520)
.+. .....+..++.+.|.+.+.+.+++++++++ ++++..++
T Consensus 150 -------~G~---------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~ 207 (344)
T 3jsk_A 150 -------EGD---------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAED 207 (344)
T ss_dssp -------CSS---------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC---------------
T ss_pred -------cCC---------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccccc
Confidence 000 001123456788999999887799999997 89988765
Q ss_pred -C--eEEEEEEEe----CCC------cEEEEecCeEEEecCCcchhhhhh
Q 009994 187 -G--TIKGVQYKT----KDG------QELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 187 -~--~v~gv~v~~----~~g------~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
+ ++.||.+.. .+| +..+++|++||+|||..|++++.+
T Consensus 208 ~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 208 EAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp -CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 3 778887752 222 345788999999999999976554
No 37
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.49 E-value=1.7e-12 Score=130.90 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=56.3
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc-hhhhhh-cCC
Q 009994 152 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSL-CKP 226 (520)
Q Consensus 152 ~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l-~~~ 226 (520)
.++...+.+.|.+.+++. |+++++++ |+++..++++. +.+...+|+..+++||.||.|+|.+| .+.+.+ +.+
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGG--FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSS--EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EECHHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCce--EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 466778999999999887 79999887 99999876642 33556677655688999999999998 566766 654
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.47 E-value=7.4e-13 Score=129.14 Aligned_cols=141 Identities=23% Similarity=0.260 Sum_probs=96.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC-CCeEEEEccCCCCCCc--eee-----eeeccchHHHHHhcCchhHHhhcccceec
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVTEPDR--IVG-----ELLQPGGYLKLVELGLEDCVEEIDAQQVL 124 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~Er~~~~~~~--~~g-----~~l~~~~~~~l~~lGl~~~l~~~~~~~~~ 124 (520)
.++||+|||||++|+++|+.|+++ |.+|+|+||....... ..+ ..+.....+.|+++|+.-.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~---------- 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYD---------- 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCE----------
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcc----------
Confidence 458999999999999999999997 9999999998643211 000 1122233344444443200
Q ss_pred eEEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC------
Q 009994 125 GYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK------ 197 (520)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~------ 197 (520)
..+. .....+...+...|.+.+.+..+++++.++ |+++..+++++.+|.+...
T Consensus 108 -----~~~~---------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~ 167 (284)
T 1rp0_A 108 -----EQDT---------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNH 167 (284)
T ss_dssp -----ECSS---------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCT
T ss_pred -----cCCC---------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEecccccccc
Confidence 0000 001124567888888888775689999997 9999988888888877531
Q ss_pred -C---CcEEEEecCeEEEecCCcchhhhhh
Q 009994 198 -D---GQELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 198 -~---g~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
+ ++..+++||.||.|+|.+|.++...
T Consensus 168 ~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 168 HTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred CccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 3445688999999999999887654
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.46 E-value=1.1e-12 Score=143.52 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=95.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCC---Cceeeeeeccc------------------hHHHHHhcCc
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP---DRIVGELLQPG------------------GYLKLVELGL 111 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~---~~~~g~~l~~~------------------~~~~l~~lGl 111 (520)
..+||+|||||++|+++|+.|+++|.+|+|+||+.... ....+..+.+. +.+.++.+++
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 45899999999999999999999999999999964322 11122222221 1122222221
Q ss_pred hhHHhhcccceeceEEEEECCcc--------ccccCC-----------------CcCCC---CCccceeecchHHHHHHH
Q 009994 112 EDCVEEIDAQQVLGYALFKDGKS--------TRLSYP-----------------LEKFH---ADVSGRSFHNGRFIQRMR 163 (520)
Q Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~-----------------~~~~~---~~~~~~~~~~~~l~~~L~ 163 (520)
.. . ....+......... ....++ ..... ..+.+..++...+.+.|.
T Consensus 351 ~~-----~-~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~ 424 (676)
T 3ps9_A 351 KF-----D-HDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVL 424 (676)
T ss_dssp CC-----C-EECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHH
T ss_pred Cc-----C-cCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHH
Confidence 10 0 00111111110000 000000 00000 012234566778999999
Q ss_pred HHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch-hhhhhc
Q 009994 164 EKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSLC 224 (520)
Q Consensus 164 ~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~-vR~~l~ 224 (520)
+.+++. |+++++++ |+++..++++ |.+.+.+|.+ ++||.||.|+|.+|. +.+..+
T Consensus 425 ~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~--i~Ad~VVlAtG~~s~~l~~~~~ 481 (676)
T 3ps9_A 425 ELAQQQ-GLQIYYQYQLQNFSRKDDC---WLLNFAGDQQ--ATHSVVVLANGHQISRFSQTST 481 (676)
T ss_dssp HHHHHT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECCGGGGGCSTTTTT
T ss_pred HHHHhC-CCEEEeCCeeeEEEEeCCe---EEEEECCCCE--EECCEEEECCCcchhccccccC
Confidence 999887 79999987 9999988885 4566767664 669999999999986 444433
No 40
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.46 E-value=3.6e-12 Score=129.71 Aligned_cols=164 Identities=20% Similarity=0.186 Sum_probs=94.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCC--Cce--eeeeecc------chHH-HHHhcCchhHHhhcc---
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP--DRI--VGELLQP------GGYL-KLVELGLEDCVEEID--- 119 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~--~~~--~g~~l~~------~~~~-~l~~lGl~~~l~~~~--- 119 (520)
++||+|||||++|+++|+.|+++|.+|+|+||..... ... .+..+.+ ...+ ..+.+.+++.+.+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5899999999999999999999999999999986432 111 1111211 1111 112223333332210
Q ss_pred cceeceEEEEECC-c------------------------cccccCCCcCCCC------CccceeecchHHHHHHHHHHHc
Q 009994 120 AQQVLGYALFKDG-K------------------------STRLSYPLEKFHA------DVSGRSFHNGRFIQRMREKAAS 168 (520)
Q Consensus 120 ~~~~~~~~~~~~~-~------------------------~~~~~~~~~~~~~------~~~~~~~~~~~l~~~L~~~~~~ 168 (520)
.....+....... . .....+|.-.... .+....++...+.+.|.+.+++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 0111122111111 0 0000011000000 1122345667899999999988
Q ss_pred CCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch-hhhhhc
Q 009994 169 LPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSLC 224 (520)
Q Consensus 169 ~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~-vR~~l~ 224 (520)
. |++++.++ |+++..+++. +.+.+.+| +++||.||.|+|.+|. +.+.++
T Consensus 163 ~-Gv~i~~~~~v~~i~~~~~~---~~v~~~~g---~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 163 R-GAKVLTHTRVEDFDISPDS---VKIETANG---SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp T-TCEEECSCCEEEEEECSSC---EEEEETTE---EEEEEEEEECCGGGHHHHGGGGT
T ss_pred C-CCEEEcCcEEEEEEecCCe---EEEEeCCC---EEEeCEEEEecCccHHHHhhhhc
Confidence 7 79999886 9999887664 44555555 3679999999999975 445554
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.45 E-value=1e-12 Score=133.28 Aligned_cols=69 Identities=7% Similarity=0.046 Sum_probs=55.0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc-hhhhhhcCC
Q 009994 151 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKP 226 (520)
Q Consensus 151 ~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-~vR~~l~~~ 226 (520)
..++...+.+.|.+.+++. |++++.++ |+++..++++ +.+++.+| +++||.||.|+|.+| .+.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---~~V~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRN-QGQVLCNHEALEIRRVDGA---WEVRCDAG---SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEESSCCCCEEEEETTE---EEEECSSE---EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEeCCe---EEEEeCCC---EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3466778999999999988 79999887 9999988775 45666666 467999999999998 566666653
No 42
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.45 E-value=1.2e-13 Score=147.84 Aligned_cols=165 Identities=20% Similarity=0.240 Sum_probs=106.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc--eeeeeeccchHHHHHhcCchhHHhhcccce-------
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR--IVGELLQPGGYLKLVELGLEDCVEEIDAQQ------- 122 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~--~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~------- 122 (520)
+.++||+|||||++||++|+.|+++|.+|+|+||.+..... ..+..+.......++.+|+.+..+......
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 45689999999999999999999999999999998654321 223334443344455555543222110000
Q ss_pred ---------------------eceEEE--EEC-CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece
Q 009994 123 ---------------------VLGYAL--FKD-GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT 178 (520)
Q Consensus 123 ---------------------~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~ 178 (520)
..+..+ ... +. ..++.. ..+.+..+....+.+.|.+.+++. +++++.++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g---~~~~r~---~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~ 271 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGG---ARVDRT---HRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRLNS 271 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTT---CSSCCE---EECSSSSCHHHHHHHHHHHHHHHT-TCCEECSE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCC---CCCCce---eecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCC
Confidence 000000 000 00 000000 000011133557889999999887 89999997
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhhh
Q 009994 179 -VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 179 -v~~~~~~~-~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
|+++..++ +++.+|++.+.+|+..+++||.||.|+|.+|..|+.+
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99999887 8888999887778766788999999999999886655
No 43
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.44 E-value=2.2e-12 Score=123.49 Aligned_cols=38 Identities=26% Similarity=0.533 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~ 90 (520)
+++||+|||||||||++|+.|+++|++|+|+||.+.+.
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 35899999999999999999999999999999987553
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.42 E-value=2.9e-13 Score=145.18 Aligned_cols=171 Identities=20% Similarity=0.244 Sum_probs=104.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc--eeeeeeccchHHHHHhcCchhHHhhcccceec-e---
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR--IVGELLQPGGYLKLVELGLEDCVEEIDAQQVL-G--- 125 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~--~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~-~--- 125 (520)
..++||+|||||++||++|+.|+++|.+|+|+||.+..... ..+..+........+++|+.+..+........ +
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999999999998654321 12223333333445555654322211000000 0
Q ss_pred -----EEEEEC--Ccc----ccccCCCcC---CCCCccce-------eecchHHHHHHHHHHHcCCCeEEEece-EEEEE
Q 009994 126 -----YALFKD--GKS----TRLSYPLEK---FHADVSGR-------SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLL 183 (520)
Q Consensus 126 -----~~~~~~--~~~----~~~~~~~~~---~~~~~~~~-------~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~ 183 (520)
...+.. ... .....++.. .......+ ......+.+.|.+.+++. +++++.++ |+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRMNTRGIEVL 282 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEeeEeE
Confidence 000000 000 000000000 00000000 022356888999999887 89999998 99999
Q ss_pred eeC-CeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhhh
Q 009994 184 EEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 184 ~~~-~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
.++ +++.+|.+...+|+..+++||.||.|+|.+|..++.+
T Consensus 283 ~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 283 KDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 876 8888998887678767789999999999999765443
No 45
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.42 E-value=1.1e-12 Score=143.86 Aligned_cols=167 Identities=16% Similarity=0.114 Sum_probs=94.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC---ceeeeeeccch------H-HHHH-----hcCchhHH-
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD---RIVGELLQPGG------Y-LKLV-----ELGLEDCV- 115 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~---~~~g~~l~~~~------~-~~l~-----~lGl~~~l- 115 (520)
+.++||+|||||++|+++|+.|+++|++|+|+||+..... ...+..+.+.. . +... ...+.+.+
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4568999999999999999999999999999999743321 11122232210 1 1100 01111111
Q ss_pred hh-cccc-eeceEEEEECCcc-c-------cccCC-----------------CcCCC---CCccceeecchHHHHHHHHH
Q 009994 116 EE-IDAQ-QVLGYALFKDGKS-T-------RLSYP-----------------LEKFH---ADVSGRSFHNGRFIQRMREK 165 (520)
Q Consensus 116 ~~-~~~~-~~~~~~~~~~~~~-~-------~~~~~-----------------~~~~~---~~~~~~~~~~~~l~~~L~~~ 165 (520)
.. .... ...+......... . ...++ ..... ..+.+..++...+.+.|.+.
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~ 421 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMML 421 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHH
T ss_pred hhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHH
Confidence 10 0000 0111111111100 0 00011 00000 01223345667899999999
Q ss_pred HHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch-hhhhh
Q 009994 166 AASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSL 223 (520)
Q Consensus 166 ~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~-vR~~l 223 (520)
+++. |++++.++ |+++..++++ +.+.+.+|+ .+++||.||.|+|.+|. +.+.+
T Consensus 422 a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~-~~i~Ad~VVlAtG~~s~~l~~~~ 476 (689)
T 3pvc_A 422 AQQN-GMTCHYQHELQRLKRIDSQ---WQLTFGQSQ-AAKHHATVILATGHRLPEWEQTH 476 (689)
T ss_dssp HHHT-TCEEEESCCEEEEEECSSS---EEEEEC-CC-CCEEESEEEECCGGGTTCSTTTT
T ss_pred HHhC-CCEEEeCCeEeEEEEeCCe---EEEEeCCCc-EEEECCEEEECCCcchhcccccc
Confidence 9887 79999887 9999988775 455666664 12569999999999985 44433
No 46
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.41 E-value=1.8e-11 Score=125.05 Aligned_cols=165 Identities=22% Similarity=0.285 Sum_probs=95.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC--ce--eeeeeccc-----hH-HHHHhcCchhHHhhc---cc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD--RI--VGELLQPG-----GY-LKLVELGLEDCVEEI---DA 120 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~--~~--~g~~l~~~-----~~-~~l~~lGl~~~l~~~---~~ 120 (520)
++||+|||||++|+++|+.|+++|.+|+|+||...... .. .+..+... .. ..++.+.+++.+.+. ..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERRL 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCccH
Confidence 47999999999999999999999999999999864321 11 11112110 00 112222333333211 01
Q ss_pred ceeceEEEEE-CCc-----cc--------ccc--------------CCCcCCCC------CccceeecchHHHHHHHHHH
Q 009994 121 QQVLGYALFK-DGK-----ST--------RLS--------------YPLEKFHA------DVSGRSFHNGRFIQRMREKA 166 (520)
Q Consensus 121 ~~~~~~~~~~-~~~-----~~--------~~~--------------~~~~~~~~------~~~~~~~~~~~l~~~L~~~~ 166 (520)
....+..... ... .. ... +|...... .+.+..++...+.+.|.+.+
T Consensus 84 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~a 163 (397)
T 2oln_A 84 IHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTLA 163 (397)
T ss_dssp EECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHHH
T ss_pred HHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHHH
Confidence 1111221111 110 00 000 01000000 11223456667889999998
Q ss_pred HcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCc-chhhhhhcC
Q 009994 167 ASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF-SNLRRSLCK 225 (520)
Q Consensus 167 ~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~-S~vR~~l~~ 225 (520)
++. |+++++++ |+++..+++. |++.+.+| +++||.||.|+|.+ +.+++.++.
T Consensus 164 ~~~-Gv~i~~~~~V~~i~~~~~~---v~v~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 164 QAA-GATLRAGETVTELVPDADG---VSVTTDRG---TYRAGKVVLACGPYTNDLLEPLGA 217 (397)
T ss_dssp HHT-TCEEEESCCEEEEEEETTE---EEEEESSC---EEEEEEEEECCGGGHHHHHGGGTC
T ss_pred HHc-CCEEECCCEEEEEEEcCCe---EEEEECCC---EEEcCEEEEcCCcChHHHhhhcCC
Confidence 887 79999887 9999988775 44555555 36799999999999 467777765
No 47
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.4e-12 Score=131.09 Aligned_cols=143 Identities=23% Similarity=0.251 Sum_probs=87.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCce----eee-ee-----c---------cchHHHHHhcCch
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI----VGE-LL-----Q---------PGGYLKLVELGLE 112 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~----~g~-~l-----~---------~~~~~~l~~lGl~ 112 (520)
+.++||+|||||++|+++|+.|+++|.+|+|+||.+...... .|. .+ . ......+......
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 457899999999999999999999999999999987532211 000 00 0 0011223333322
Q ss_pred hHHhhcccceeceEEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEE
Q 009994 113 DCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKG 191 (520)
Q Consensus 113 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~g 191 (520)
+.+.-... .+........ ...-.......+.+.|.+.+++. +++++.++ |+++..+++.
T Consensus 105 ~~~~~~~~---~Gi~~~~~~~-------------g~~~~~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~~~~--- 164 (417)
T 3v76_A 105 DFVALVER---HGIGWHEKTL-------------GQLFCDHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERTASG--- 164 (417)
T ss_dssp HHHHHHHH---TTCCEEECST-------------TEEEESSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---
T ss_pred HHHHHHHH---cCCCcEEeeC-------------CEEeeCCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---
Confidence 22211100 0111110000 00000123457888999998887 89999987 9999888774
Q ss_pred EEEEeCCCcEEEEecCeEEEecCCcc
Q 009994 192 VQYKTKDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 192 v~v~~~~g~~~~~~ad~vV~AdG~~S 217 (520)
+.+.+.+| +++||.||.|+|.+|
T Consensus 165 ~~V~~~~g---~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 165 FRVTTSAG---TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEEETTE---EEEESEEEECCCCSS
T ss_pred EEEEECCc---EEEeeEEEECCCCcc
Confidence 55667666 467999999999999
No 48
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.37 E-value=1.7e-12 Score=137.30 Aligned_cols=62 Identities=26% Similarity=0.404 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEeCCCcEEEEecC-eEEEecCCcchhh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKTKDGQELRAYAP-LTIVCDGCFSNLR 220 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~gv~v~~~~g~~~~~~ad-~vV~AdG~~S~vR 220 (520)
.+.+.|.+.+++. |+++++++ |+++..+ +++++||.+.. +|+..+++|| .||.|+|.+|.-+
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~ 267 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYND 267 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCH
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCH
Confidence 7899999999887 89999997 9999987 68899998876 4555678995 9999999999543
No 49
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.37 E-value=5.4e-12 Score=123.98 Aligned_cols=143 Identities=26% Similarity=0.276 Sum_probs=94.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCc-------eeeeeeccchHHHHHhcCchhHHhhcccce
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDR-------IVGELLQPGGYLKLVELGLEDCVEEIDAQQ 122 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~-------~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~ 122 (520)
..++||+|||||++|+++|+.|+++ |.+|+|+|+....... .....+.+...+.|+++|+.-.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~-------- 134 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYE-------- 134 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCE--------
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccc--------
Confidence 3457999999999999999999998 9999999998643211 0111222333444444443200
Q ss_pred eceEEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC----C--eEEEEEEE
Q 009994 123 VLGYALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN----G--TIKGVQYK 195 (520)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~----~--~v~gv~v~ 195 (520)
..+ ......+...+...|++.+.+.++++++.++ |+++..++ + ++.||.+.
T Consensus 135 -------~~g---------------~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 135 -------DEG---------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp -------ECS---------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred -------cCC---------------CeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 000 0001123456788999999887899999887 99998763 4 78888875
Q ss_pred e----CCC------cEEEEec---------------CeEEEecCCcchhhhhhc
Q 009994 196 T----KDG------QELRAYA---------------PLTIVCDGCFSNLRRSLC 224 (520)
Q Consensus 196 ~----~~g------~~~~~~a---------------d~vV~AdG~~S~vR~~l~ 224 (520)
. .+| +..++.| ++||+|+|..|++.+.+.
T Consensus 193 ~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 193 WTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp EHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred ceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 2 223 3356779 999999999988877664
No 50
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.35 E-value=8.4e-12 Score=117.84 Aligned_cols=132 Identities=27% Similarity=0.291 Sum_probs=89.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
+++||+|||||++|+.+|+.|++.|.+|+|+|+.... .|....+.. ..+.....+..++
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~----~G~~~~~~~----~~~~~~~~~~~~~------------- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA----VMMPFLPPK----PPFPPGSLLERAY------------- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG----TTCCSSCCC----SCCCTTCHHHHHC-------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc----CCcccCccc----cccchhhHHhhhc-------------
Confidence 3589999999999999999999999999999997321 111111100 0000000000000
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
+ .. +. ++..+.+.|.+.+++.++++++.++|+++..+++++.+|. ..+|+ +++||+||.|
T Consensus 61 ----------d-~~---g~--~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~--~~~g~--~i~a~~VV~A 120 (232)
T 2cul_A 61 ----------D-PK---DE--RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVR--TWEGP--PARGEKVVLA 120 (232)
T ss_dssp ----------C-TT---CC--CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--CEECSEEEEC
T ss_pred ----------c-CC---CC--CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEE--ECCCC--EEECCEEEEC
Confidence 0 00 11 5667889999999887789998766999998888755444 46675 3669999999
Q ss_pred cCCcchhhhhhcC
Q 009994 213 DGCFSNLRRSLCK 225 (520)
Q Consensus 213 dG~~S~vR~~l~~ 225 (520)
+|.+|..+..++.
T Consensus 121 ~G~~s~~~~~~G~ 133 (232)
T 2cul_A 121 VGSFLGARLFLGG 133 (232)
T ss_dssp CTTCSSCEEEETT
T ss_pred CCCChhhceecCC
Confidence 9999998876654
No 51
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.34 E-value=3.7e-11 Score=128.51 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=57.1
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeEEEecCCcc-hhhhhhcC
Q 009994 153 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFS-NLRRSLCK 225 (520)
Q Consensus 153 ~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~vV~AdG~~S-~vR~~l~~ 225 (520)
++..++...|.+.+.+. |+++..++ |+++..+++++.+|++.+. +|+..+++||.||.|+|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 45567888888888887 79999886 9999998888888888763 56555688999999999998 45665543
No 52
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.31 E-value=2.3e-11 Score=126.02 Aligned_cols=63 Identities=27% Similarity=0.377 Sum_probs=50.1
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEec----eEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch
Q 009994 151 RSFHNGRFIQRMREKAASLPNVRLEQG----TVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 151 ~~~~~~~l~~~L~~~~~~~~~v~i~~~----~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~ 218 (520)
..++...+.+.|.+.+++. |++++.+ +|+++..+++++.+|+ +.+|+ +++||.||.|+|++|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~~~~v~gV~--t~~G~--~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFENNDVKGAV--TADGK--IWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEETTEEEEEE--ETTTE--EEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEecCCeEEEEE--ECCCC--EEECCEEEECCCCChh
Confidence 3455668999999999887 7999887 5999998888765554 56675 3669999999999985
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.29 E-value=1.1e-11 Score=128.75 Aligned_cols=154 Identities=18% Similarity=0.249 Sum_probs=94.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCce--e--e--eeeccchH-HHHHhcCchhH-----Hhhcc
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI--V--G--ELLQPGGY-LKLVELGLEDC-----VEEID 119 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~--~--g--~~l~~~~~-~~l~~lGl~~~-----l~~~~ 119 (520)
.+++||+|||||++|+++|+.|+++|.+|+|+||.+...... . + ........ +.+..++.... +....
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 456899999999999999999999999999999986432110 0 0 00000001 11222211100 00000
Q ss_pred cc------eeceEEEEECCccccccCCCcCCCCCccceeec----chHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe
Q 009994 120 AQ------QVLGYALFKDGKSTRLSYPLEKFHADVSGRSFH----NGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGT 188 (520)
Q Consensus 120 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~ 188 (520)
.. ...+..+. ....+..+. ...+.+.|.+.+++. +++++.++ |+++..++++
T Consensus 104 ~~~~~~~~~~~G~~~~----------------~~~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~~~~~ 166 (447)
T 2i0z_A 104 NEDIITFFENLGVKLK----------------EEDHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEYENGQ 166 (447)
T ss_dssp HHHHHHHHHHTTCCEE----------------ECGGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTE
T ss_pred HHHHHHHHHhcCCceE----------------EeeCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEecCCc
Confidence 00 00000000 001122222 356888999999886 89999887 9999988887
Q ss_pred EEEEEEEeCCCcEEEEecCeEEEecCCcc-----------hhhhhhcCC
Q 009994 189 IKGVQYKTKDGQELRAYAPLTIVCDGCFS-----------NLRRSLCKP 226 (520)
Q Consensus 189 v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-----------~vR~~l~~~ 226 (520)
+.+|+ ..+|+ +++||.||.|||.+| .+++.++..
T Consensus 167 v~~V~--~~~G~--~i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 167 TKAVI--LQTGE--VLETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EEEEE--ETTCC--EEECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EEEEE--ECCCC--EEECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 55554 45665 467999999999999 788888764
No 54
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.29 E-value=2.2e-10 Score=118.03 Aligned_cols=57 Identities=23% Similarity=0.282 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+.+.|.+.+++. |++++.++ |+++..+++++++|+. +|+ +++||.||.|.|.+...
T Consensus 197 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~gv~~---~g~--~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 197 GIIDALETVISAN-GGKIHTGQEVSKILIENGKAAGIIA---DDR--IHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEEE---TTE--EEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHc-CCEEEECCceeEEEEECCEEEEEEE---CCE--EEECCEEEECCCHHHHH
Confidence 4677788888887 78999887 9999998888766654 354 46699999999987654
No 55
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.27 E-value=2.8e-11 Score=129.99 Aligned_cols=69 Identities=13% Similarity=0.257 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEecCCcchhhhhhc
Q 009994 156 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNLRRSLC 224 (520)
Q Consensus 156 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 224 (520)
..+...|.+.+.+.++++++.++ |+++..+++++.||.+.+ .+|+..+++|+.||.|||++|.++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~ 204 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT 204 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcC
Confidence 36888999999888559999998 999998888888887765 6787667899999999999999876554
No 56
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.27 E-value=3.1e-11 Score=127.48 Aligned_cols=165 Identities=21% Similarity=0.247 Sum_probs=89.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceee-------eeeccchHHHHHhcCchhHHhhcccceec
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVG-------ELLQPGGYLKLVELGLEDCVEEIDAQQVL 124 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g-------~~l~~~~~~~l~~lGl~~~l~~~~~~~~~ 124 (520)
...+||+||||||+|+++|+.|++.|++|+|+||......+.+. ..+.+.....+..-|....-.........
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 45689999999999999999999999999999998532111000 00000000000000000000000000000
Q ss_pred e--------EEEE-ECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEE
Q 009994 125 G--------YALF-KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQY 194 (520)
Q Consensus 125 ~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v 194 (520)
. ...+ ..+......+. ..+.........+.+.|++.+++. |+++++++ |+++..+++++.+|+
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~-----~~p~~G~~~~~~l~~~L~~~l~~~-Gv~I~~~t~V~~I~~~~~~v~gV~- 257 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYV-----SKPHIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMEDGQITGVT- 257 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTB-----SSCCCCHHHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESSSBEEEEE-
T ss_pred cccccHHHHHHHHHHcCCCceEeec-----cccccccchHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEEeCCEEEEEE-
Confidence 0 0000 00000000000 011111233466888899999887 89999997 999998887766555
Q ss_pred EeCCCcEEEEecCeEEEecCCcch----hhhhhcCC
Q 009994 195 KTKDGQELRAYAPLTIVCDGCFSN----LRRSLCKP 226 (520)
Q Consensus 195 ~~~~g~~~~~~ad~vV~AdG~~S~----vR~~l~~~ 226 (520)
..+|++ ++||+||+|||.+|. ..+..++.
T Consensus 258 -l~~G~~--i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 258 -LSNGEE--IKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp -ETTSCE--EECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred -ECCCCE--EECCEEEECCCCChhhHHHHHHHcCCC
Confidence 456764 669999999999995 34444543
No 57
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.26 E-value=1.3e-10 Score=122.42 Aligned_cols=63 Identities=16% Similarity=0.186 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhhhc
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 224 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 224 (520)
.+.+.|.+.+++. |++|+.++ |++++.+++++++|+ +.+|++ +.||.||.+.+.....++.+.
T Consensus 222 ~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~~~~~~gV~--~~~g~~--~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 222 ALVQGMIKLFQDL-GGEVVLNARVSHMETTGNKIEAVH--LEDGRR--FLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCE--EECSCEEECCC----------
T ss_pred chHHHHHHHHHHh-CCceeeecceeEEEeeCCeEEEEE--ecCCcE--EEcCEEEECCCHHHHHHHhcc
Confidence 4677788888888 78999998 999999999877765 567875 559999998888777776664
No 58
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.26 E-value=5.2e-12 Score=135.23 Aligned_cols=163 Identities=20% Similarity=0.278 Sum_probs=97.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc--eeeeeeccchHHHHHhcCchhHHhh-------------
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR--IVGELLQPGGYLKLVELGLEDCVEE------------- 117 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~--~~g~~l~~~~~~~l~~lGl~~~l~~------------- 117 (520)
..+||+|||||++|+++|+.|++.|.+|+|+||.+..... ..+..+........++.|+.+..+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998654321 1111121111111111222111000
Q ss_pred -------cc--------cceeceEEE--EE--CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece
Q 009994 118 -------ID--------AQQVLGYAL--FK--DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT 178 (520)
Q Consensus 118 -------~~--------~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~ 178 (520)
.. .....+..+ .. .+.. ++.. ..+.........+...|.+.+++. +++++.++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~----~~r~---~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~t 276 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGAS----VNRS---HRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLNS 276 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCS----SCCE---EESTTTCCHHHHHHHHHHHHHHHT-TCEEESSE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCc----CCee---EecCCCCCCHHHHHHHHHHHHHHc-CCeEEecC
Confidence 00 000000000 00 0000 0000 000000122446888999999887 89999998
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhhh
Q 009994 179 -VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 179 -v~~~~~~~-~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
|+++..++ +++.+|.+.+.+|+..+++||.||.|+|.+|..++.+
T Consensus 277 ~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 277 RVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp EEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 99998777 8888999887778777789999999999999765544
No 59
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.25 E-value=5.6e-11 Score=126.58 Aligned_cols=152 Identities=22% Similarity=0.272 Sum_probs=95.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC-CCCceeeeeecc-chHHHHHhc---C-chhHHhhcccceece
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIVGELLQP-GGYLKLVEL---G-LEDCVEEIDAQQVLG 125 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~-~~~~~~g~~l~~-~~~~~l~~l---G-l~~~l~~~~~~~~~~ 125 (520)
+.++||+|||||+||+++|+.|++.|.+|+|+|+... .....+...... ....+++.+ + +...... ..+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d-----~~g 93 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID-----ATG 93 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH-----HHE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH-----hcC
Confidence 4569999999999999999999999999999999742 111111111111 112233332 2 1111100 011
Q ss_pred EEE--EECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEE
Q 009994 126 YAL--FKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELR 203 (520)
Q Consensus 126 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~ 203 (520)
..+ ...... + ........+++..+...|.+.+++.++++++.+.|+++..+++++.+|. ..+|+ +
T Consensus 94 i~f~~l~~~kg-----p----av~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~--t~~G~--~ 160 (641)
T 3cp8_A 94 IQFRMLNRSKG-----P----AMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVT--VRSGR--A 160 (641)
T ss_dssp EEEEEECSSSC-----T----TTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSC--E
T ss_pred CchhhcccccC-----c----cccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEE--ECCCc--E
Confidence 111 111110 0 0011123577888999999999887799998778999988888777665 45675 4
Q ss_pred EecCeEEEecCCcchhhh
Q 009994 204 AYAPLTIVCDGCFSNLRR 221 (520)
Q Consensus 204 ~~ad~vV~AdG~~S~vR~ 221 (520)
++||.||.|||.++..+-
T Consensus 161 i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 161 IQAKAAILACGTFLNGLI 178 (641)
T ss_dssp EEEEEEEECCTTCBTCEE
T ss_pred EEeCEEEECcCCCCCccc
Confidence 679999999999976443
No 60
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.25 E-value=4.7e-11 Score=127.20 Aligned_cols=156 Identities=19% Similarity=0.255 Sum_probs=96.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC-CCCceeeeeec----cchHHHHHhcCc-hhHHhhcccceeceE
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIVGELLQ----PGGYLKLVELGL-EDCVEEIDAQQVLGY 126 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~-~~~~~~g~~l~----~~~~~~l~~lGl-~~~l~~~~~~~~~~~ 126 (520)
.++||+|||||+||+++|+.|++.|.+|+|+|+... .....+...+. ....+.++.+|- ....... ....+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~---~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQ---AGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHH---HEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhh---cccch
Confidence 468999999999999999999999999999999742 11111111111 011222333331 1111000 00011
Q ss_pred EEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEec
Q 009994 127 ALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYA 206 (520)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~a 206 (520)
........ + ........+++..+...|.+.+++.+|+++..++|+++..+++++.+|. ..+|. +++|
T Consensus 104 ~~l~~~kg-----p----av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~--t~dG~--~I~A 170 (651)
T 3ces_A 104 RILNASKG-----P----AVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAV--TQMGL--KFRA 170 (651)
T ss_dssp EEESTTSC-----G----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEE--ETTSE--EEEE
T ss_pred hhhhcccC-----c----ccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEE--ECCCC--EEEC
Confidence 11111000 0 0001123567778999999999886689997777999988888776665 45664 4679
Q ss_pred CeEEEecCCcchhhhhhc
Q 009994 207 PLTIVCDGCFSNLRRSLC 224 (520)
Q Consensus 207 d~vV~AdG~~S~vR~~l~ 224 (520)
|.||.|||.+|..+...+
T Consensus 171 d~VVLATGt~s~~~~i~G 188 (651)
T 3ces_A 171 KAVVLTVGTFLDGKIHIG 188 (651)
T ss_dssp EEEEECCSTTTCCEEECC
T ss_pred CEEEEcCCCCccCccccC
Confidence 999999999987765543
No 61
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.24 E-value=7.8e-11 Score=125.04 Aligned_cols=152 Identities=17% Similarity=0.205 Sum_probs=95.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC-CCCceeeeee---c-cchHHHHHhcC-chhHHhhcccceeceE
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIVGELL---Q-PGGYLKLVELG-LEDCVEEIDAQQVLGY 126 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~-~~~~~~g~~l---~-~~~~~~l~~lG-l~~~l~~~~~~~~~~~ 126 (520)
.++||+|||||+||+++|+.|++.|.+|+|+|+... .....+...+ . ....+.++.+| ....... ..+.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d-----~~gi 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAID-----QTGI 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHH-----HHEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhh-----hccc
Confidence 468999999999999999999999999999999742 1111111111 0 01122333333 2211111 0111
Q ss_pred EE--EECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009994 127 AL--FKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRA 204 (520)
Q Consensus 127 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~ 204 (520)
.+ ...... + ........+++..+.+.|.+.+++.+|+++..++|+++..+++++.+|. ..+|. ++
T Consensus 101 ~f~~l~~~kG-----p----av~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~--t~dG~--~i 167 (637)
T 2zxi_A 101 QFKMLNTRKG-----K----AVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVR--TNLGV--EY 167 (637)
T ss_dssp EEEEESTTSC-----G----GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEE--ETTSC--EE
T ss_pred ceeecccccC-----c----cccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEE--ECCCc--EE
Confidence 11 111000 0 0001123567788999999999886799997777999988888776665 45675 46
Q ss_pred ecCeEEEecCCcchhhhh
Q 009994 205 YAPLTIVCDGCFSNLRRS 222 (520)
Q Consensus 205 ~ad~vV~AdG~~S~vR~~ 222 (520)
+||.||.|+|.++..+..
T Consensus 168 ~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 168 KTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp ECSEEEECCTTCBTCEEE
T ss_pred EeCEEEEccCCCccCcee
Confidence 799999999999876644
No 62
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.22 E-value=1.6e-10 Score=120.00 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=52.2
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEe---------------eCCeEEEEEEEeCCCcEEEE--ecCeEEEec
Q 009994 152 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLE---------------ENGTIKGVQYKTKDGQELRA--YAPLTIVCD 213 (520)
Q Consensus 152 ~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~---------------~~~~v~gv~v~~~~g~~~~~--~ad~vV~Ad 213 (520)
.++...+.+.|.+.+++. |++++.++ |+++.. +++++.+| .+.+|+ + +||.||.|+
T Consensus 177 ~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V--~t~~g~---i~~~Ad~VV~At 250 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAA--VLSDGT---RVEVGEKLVVAA 250 (448)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEE--EETTSC---EEEEEEEEEECC
T ss_pred EEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccCCCceEEE--EeCCCE---EeecCCEEEECC
Confidence 455668999999999887 79999876 999987 45554444 456663 5 799999999
Q ss_pred CCcch-hhhhhcCC
Q 009994 214 GCFSN-LRRSLCKP 226 (520)
Q Consensus 214 G~~S~-vR~~l~~~ 226 (520)
|.+|. +.+.++..
T Consensus 251 G~~s~~l~~~~g~~ 264 (448)
T 3axb_A 251 GVWSNRLLNPLGID 264 (448)
T ss_dssp GGGHHHHHGGGTCC
T ss_pred CcCHHHHHHHcCCC
Confidence 99986 66766543
No 63
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=6.6e-11 Score=106.84 Aligned_cols=117 Identities=21% Similarity=0.325 Sum_probs=84.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....+ . ..+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~---------~------~~~----------------------- 43 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG---------V------SRV----------------------- 43 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT---------C------SCC-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC---------c------hhh-----------------------
Confidence 68999999999999999999999999999998521100 0 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecC
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDG 214 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG 214 (520)
..++. + + ..+....+.+.+.+.+++. +++++.++|+++..+++. +.+..++| ++.+|+||.|+|
T Consensus 44 --~~~~~--~---~--~~~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~~~~---~~v~~~~g---~i~ad~vI~A~G 107 (180)
T 2ywl_A 44 --PNYPG--L---L--DEPSGEELLRRLEAHARRY-GAEVRPGVVKGVRDMGGV---FEVETEEG---VEKAERLLLCTH 107 (180)
T ss_dssp --CCSTT--C---T--TCCCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSS---EEEECSSC---EEEEEEEEECCT
T ss_pred --hccCC--C---c--CCCCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEcCCE---EEEEECCC---EEEECEEEECCC
Confidence 00010 0 0 0133456888888888887 799988888888876654 44556666 467999999999
Q ss_pred CcchhhhhhcC
Q 009994 215 CFSNLRRSLCK 225 (520)
Q Consensus 215 ~~S~vR~~l~~ 225 (520)
..+.+++.+++
T Consensus 108 ~~~~~~~~~g~ 118 (180)
T 2ywl_A 108 KDPTLPSLLGL 118 (180)
T ss_dssp TCCHHHHHHTC
T ss_pred CCCCccccCCC
Confidence 99988777765
No 64
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.22 E-value=3.7e-11 Score=123.19 Aligned_cols=168 Identities=16% Similarity=0.105 Sum_probs=91.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCc--eeee-ee-ccch----H--HHHHhcCchhHHhhc--
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDR--IVGE-LL-QPGG----Y--LKLVELGLEDCVEEI-- 118 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~--~~g~-~l-~~~~----~--~~l~~lGl~~~l~~~-- 118 (520)
.++||+|||||++|+++|+.|+++ |++|+|+|+....... ..+. .+ .+.. . ...+.+.++......
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999 9999999997533221 1111 22 1111 0 111111222110000
Q ss_pred -ccceeceEEEEEC-----C----ccccccCCC-------cCCC---CCccceeecchHHHHHHHHHHHcCCCeEEEece
Q 009994 119 -DAQQVLGYALFKD-----G----KSTRLSYPL-------EKFH---ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT 178 (520)
Q Consensus 119 -~~~~~~~~~~~~~-----~----~~~~~~~~~-------~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~ 178 (520)
......+...... + ......+|. .... ..+....++...+.+.|.+.+++. |+++++++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~-Gv~i~~~~ 193 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQ-GAGLLLNT 193 (405)
T ss_dssp CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTT-TCEEECSC
T ss_pred CCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHC-CCEEEcCC
Confidence 0001111111110 0 000000110 0000 011223566778999999999887 79998886
Q ss_pred -EE---------EEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc-hhhh-hhcCCC
Q 009994 179 -VT---------SLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRR-SLCKPK 227 (520)
Q Consensus 179 -v~---------~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S-~vR~-~l~~~~ 227 (520)
|+ ++..+++++ .+.+.+| +++||.||.|+|.+| .+++ .++...
T Consensus 194 ~v~~~~g~~~~~~i~~~~~~v---~v~~~~g---~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTNTHQ---IVVHETR---QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp EEEEETTEEEEECBCC----------CBCCE---EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred EEEeccccccccceEeeCCeE---EEEECCc---EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 88 777666643 3444454 477999999999999 6887 777643
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.19 E-value=7.7e-11 Score=120.48 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=83.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCcee----ee----e--eccc---------hHHHHHhcCchhH
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV----GE----L--LQPG---------GYLKLVELGLEDC 114 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~----g~----~--l~~~---------~~~~l~~lGl~~~ 114 (520)
++||+|||||++|+++|+.|+++|.+|+|+||.+....... |. . ..+. ....+......+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 58999999999999999999999999999999864321100 00 0 0000 0011111111111
Q ss_pred HhhcccceeceEEEEECCccccccCCCcCCCCCccceee---cchHHHHHHHHHHHcCCCeEEEece-EEEEEee----C
Q 009994 115 VEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRSF---HNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE----N 186 (520)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~----~ 186 (520)
+.... ..+..+... ..+..+ +...+.+.|.+.+++. +++++.++ |+++..+ +
T Consensus 84 ~~~~~---~~Gi~~~~~----------------~~g~~~p~~~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~~g~~ 143 (401)
T 2gqf_A 84 ISLVA---EQGITYHEK----------------ELGQLFCDEGAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQNDEK 143 (401)
T ss_dssp HHHHH---HTTCCEEEC----------------STTEEEETTCTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECCSCSS
T ss_pred HHHHH---hCCCceEEC----------------cCCEEccCCCHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcccCcCC
Confidence 11000 001111000 011111 4567888888888876 79999987 9999866 4
Q ss_pred CeEEEEEEEeCCCcEEEEecCeEEEecCCcc
Q 009994 187 GTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 187 ~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S 217 (520)
+. +.+...+| +++||.||.|+|.+|
T Consensus 144 ~~---~~v~~~~g---~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 144 VR---FVLQVNST---QWQCKNLIVATGGLS 168 (401)
T ss_dssp CC---EEEEETTE---EEEESEEEECCCCSS
T ss_pred Ce---EEEEECCC---EEECCEEEECCCCcc
Confidence 43 44555555 467999999999999
No 66
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.19 E-value=5.5e-11 Score=126.22 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEe-eCC------eEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLE-ENG------TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~-~~~------~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+.+.|.+.+++.+++++++++ |+++.. +++ ++.||.+.+ .+|+..+++|+.||.|+|.+|.+
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 5667788888775589999998 999987 445 788888876 46776678999999999999976
No 67
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.19 E-value=1.1e-09 Score=112.84 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhhhc
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 224 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 224 (520)
.+.+.|.+.+++. |++++.++ |+++..+++++ + ..+|++ ++||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~v----V-~~~g~~--~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMEN-KGKILTRKEVVEINIEEKKV----Y-TRDNEE--YSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTT-TCEEESSCCEEEEETTTTEE----E-ETTCCE--EECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHC-CCEEEcCCeEEEEEEECCEE----E-EeCCcE--EEeCEEEECCCHHHHH-HhcC
Confidence 4667778888877 78999998 99999877754 3 345654 5699999999987644 4443
No 68
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.18 E-value=1.4e-10 Score=117.27 Aligned_cols=158 Identities=20% Similarity=0.191 Sum_probs=90.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc----eeeeeecc-----c-hH-HHHHhcCchhHHhhcc---
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR----IVGELLQP-----G-GY-LKLVELGLEDCVEEID--- 119 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~----~~g~~l~~-----~-~~-~~l~~lGl~~~l~~~~--- 119 (520)
++||+|||||++|+++|+.|+++|.+|+|+||....... ..+..+.. . .. ...+.+.+++.+....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 81 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNEDD 81 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCCc
Confidence 579999999999999999999999999999998543210 11111111 0 00 0111222222222100
Q ss_pred -cceeceEE-EEECCc-----------------------cccccCCCcCCCC------CccceeecchHHHHHHHHHHHc
Q 009994 120 -AQQVLGYA-LFKDGK-----------------------STRLSYPLEKFHA------DVSGRSFHNGRFIQRMREKAAS 168 (520)
Q Consensus 120 -~~~~~~~~-~~~~~~-----------------------~~~~~~~~~~~~~------~~~~~~~~~~~l~~~L~~~~~~ 168 (520)
.....+.. +..+.. .....+|.-.... .+....++...+.+.|.+.+++
T Consensus 82 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 161 (372)
T 2uzz_A 82 PIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAKE 161 (372)
T ss_dssp CSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHHH
T ss_pred cceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHHH
Confidence 00111211 111110 0000111000000 1122345666889999999988
Q ss_pred CCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch
Q 009994 169 LPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 169 ~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~ 218 (520)
. |++++.++ |+++..+++. +.+++.+|+ ++||.||.|+|.+|.
T Consensus 162 ~-G~~i~~~~~V~~i~~~~~~---~~v~~~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 162 A-GCAQLFNCPVTAIRHDDDG---VTIETADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp T-TCEEECSCCEEEEEECSSS---EEEEESSCE---EEEEEEEECCGGGGG
T ss_pred C-CCEEEcCCEEEEEEEcCCE---EEEEECCCe---EEcCEEEEcCCccHH
Confidence 7 79999886 9999887664 445566663 669999999999874
No 69
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.17 E-value=5.1e-10 Score=116.65 Aligned_cols=62 Identities=24% Similarity=0.365 Sum_probs=46.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC------CeEEEEccCCCCCCcee-----------ee-e---eccchHHHHHhcCch
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG------RRVHVIERDVTEPDRIV-----------GE-L---LQPGGYLKLVELGLE 112 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G------~~V~v~Er~~~~~~~~~-----------g~-~---l~~~~~~~l~~lGl~ 112 (520)
.+||+|||||++||++|+.|+++| ++|+|+|++.....+.. |. . ..+...+.++++|+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 579999999999999999999999 99999999854432211 10 1 145566888899987
Q ss_pred hHH
Q 009994 113 DCV 115 (520)
Q Consensus 113 ~~l 115 (520)
+.+
T Consensus 85 ~~~ 87 (470)
T 3i6d_A 85 HLL 87 (470)
T ss_dssp TTE
T ss_pred cee
Confidence 544
No 70
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.14 E-value=1.4e-10 Score=124.25 Aligned_cols=63 Identities=11% Similarity=0.194 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 156 GRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 156 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
..+.+.|.+.+.+. +++++.++ |+++..+ ++++.||.+.+ .+|+..+++|+.||.|+|++|.+
T Consensus 143 ~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 46788899988887 89999998 9999886 67888998876 67777778999999999999864
No 71
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.14 E-value=3.2e-10 Score=121.88 Aligned_cols=62 Identities=21% Similarity=0.280 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+...|.+.+.+. +++++.++ |+++..+++++.||.+.+ .+|+..+++|+.||.|+|++|.+
T Consensus 156 ~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 156 SLLHTLYGRSLRY-DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHTTS-CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 6888899998875 89999998 999998888999998876 67877778999999999999975
No 72
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.12 E-value=4.7e-10 Score=109.32 Aligned_cols=113 Identities=20% Similarity=0.305 Sum_probs=81.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.+||+|||||++|+++|..|++.|++|+|+|+.... +. +. . .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----~~-~~-----------------~----~----------- 43 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR-----NR-FA-----------------S----H----------- 43 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG-----GG-GC-----------------S----C-----------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc-----cc-cc-----------------h----h-----------
Confidence 479999999999999999999999999999997410 00 00 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
...++. ........+...+.+.+.+.+++++..++|+++..+++. ..+...+|++ +.+|.||.|+
T Consensus 44 --~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~d~vviAt 108 (297)
T 3fbs_A 44 --SHGFLG--------QDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE---FIVEIDGGRR--ETAGRLILAM 108 (297)
T ss_dssp --CCSSTT--------CTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE---EEEEETTSCE--EEEEEEEECC
T ss_pred --hcCCcC--------CCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe---EEEEECCCCE--EEcCEEEECC
Confidence 000110 012344568888888888877899988889999887764 4566677764 5699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|..+..
T Consensus 109 G~~~~~ 114 (297)
T 3fbs_A 109 GVTDEL 114 (297)
T ss_dssp CCEEEC
T ss_pred CCCCCC
Confidence 997654
No 73
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.12 E-value=1e-09 Score=118.75 Aligned_cols=62 Identities=15% Similarity=0.319 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+...|.+.+.+. +++++.++ |+++..+++++.||.+.+ .+|+...++|+.||.|+|+++.+
T Consensus 159 ~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5788888888876 89999998 999988888888988865 67877778999999999999865
No 74
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.11 E-value=3e-10 Score=114.36 Aligned_cols=126 Identities=18% Similarity=0.216 Sum_probs=84.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+..+||+|||||++|+++|+.|++.|++|+|+|+.+.. | +... .. .... ..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----g------g~~~--~~--------~~~~-----~~--- 62 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL-----G------GQLA--AL--------YPEK-----HI--- 62 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----C------HHHH--HT--------CTTS-----EE---
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC-----C------Cccc--cc--------CCCc-----cc---
Confidence 34689999999999999999999999999999997532 1 1100 00 0000 00
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
...+ .+ ..+.+..+.+.|.+.+.+. +++++.++ |+++..+++. .+++...+|+. +.+|+||
T Consensus 63 -----~~~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~~--~~~~~li 124 (360)
T 3ab1_A 63 -----YDVA--GF------PEVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKLDDG--TFETRTNTGNV--YRSRAVL 124 (360)
T ss_dssp -----CCST--TC------SSEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEECTTS--CEEEEETTSCE--EEEEEEE
T ss_pred -----ccCC--CC------CCCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEECCCc--eEEEEECCCcE--EEeeEEE
Confidence 0000 00 0144567888888888876 78888876 9998876542 24455667754 5699999
Q ss_pred EecCCcchhhhhhc
Q 009994 211 VCDGCFSNLRRSLC 224 (520)
Q Consensus 211 ~AdG~~S~vR~~l~ 224 (520)
.|+|.+|..++.+.
T Consensus 125 ~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 125 IAAGLGAFEPRKLP 138 (360)
T ss_dssp ECCTTCSCCBCCCG
T ss_pred EccCCCcCCCCCCC
Confidence 99999886655443
No 75
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.11 E-value=3.8e-10 Score=112.24 Aligned_cols=124 Identities=23% Similarity=0.308 Sum_probs=83.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
.++||+|||||++|+++|..|++.|++|+|+|+.... | +.... . .... ..+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----g------g~~~~--~--------~~~~-----~~~--- 54 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP-----G------GQLTA--L--------YPEK-----YIY--- 54 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS-----C------HHHHH--T--------CTTS-----EEC---
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC-----C------Ceeec--c--------CCCc-----eee---
Confidence 3589999999999999999999999999999997532 1 11000 0 0000 000
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
..+ .+ ..+.+..+.+.|.+.+.+. +++++.++ |+++..+++. +++...+|++ +.+|.||.
T Consensus 55 -----~~~--~~------~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~~~lv~ 115 (335)
T 2zbw_A 55 -----DVA--GF------PKVYAKDLVKGLVEQVAPF-NPVYSLGERAETLEREGDL---FKVTTSQGNA--YTAKAVII 115 (335)
T ss_dssp -----CST--TC------SSEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEETTE---EEEEETTSCE--EEEEEEEE
T ss_pred -----ccC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEECCCE---EEEEECCCCE--EEeCEEEE
Confidence 000 00 0134566778888888776 68887775 9998877663 4566667754 56999999
Q ss_pred ecCCcchhhhhhc
Q 009994 212 CDGCFSNLRRSLC 224 (520)
Q Consensus 212 AdG~~S~vR~~l~ 224 (520)
|+|.+|...+...
T Consensus 116 AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 116 AAGVGAFEPRRIG 128 (335)
T ss_dssp CCTTSEEEECCCC
T ss_pred CCCCCCCCCCCCC
Confidence 9999876555443
No 76
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.10 E-value=2.9e-10 Score=113.78 Aligned_cols=129 Identities=13% Similarity=0.179 Sum_probs=82.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
++||+|||||++|+++|..|+++|++|+|+|+.+... |... . .++.+ .... .
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~g----g~~~--~---------~~~~~-----------~~~~-~- 54 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPG----GAWQ--H---------AWHSL-----------HLFS-P- 54 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSS----GGGG--G---------SCTTC-----------BCSS-C-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC----Cccc--C---------CCCCc-----------EecC-c-
Confidence 4799999999999999999999999999999985321 1000 0 00000 0000 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEE-EEeCCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQ-YKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~-v~~~~g~~~~~~ad~vV~ 211 (520)
.....++..... .......++..+.+.|.+.+++. +++++.++ |+++..+++. +. +.+.+| ++.+|.||.
T Consensus 55 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~~v~~~~g---~~~~d~vV~ 126 (357)
T 4a9w_A 55 AGWSSIPGWPMP-ASQGPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFGER---LRVVARDGR---QWLARAVIS 126 (357)
T ss_dssp GGGSCCSSSCCC-CCSSSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEETTE---EEEEETTSC---EEEEEEEEE
T ss_pred hhhhhCCCCCCC-CCccCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECCCc---EEEEEeCCC---EEEeCEEEE
Confidence 000001100000 01112245677888898888887 78898886 9999888774 44 556666 467999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|+|.+|.
T Consensus 127 AtG~~~~ 133 (357)
T 4a9w_A 127 ATGTWGE 133 (357)
T ss_dssp CCCSGGG
T ss_pred CCCCCCC
Confidence 9998874
No 77
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.09 E-value=8.8e-11 Score=127.31 Aligned_cols=65 Identities=15% Similarity=0.149 Sum_probs=51.8
Q ss_pred chHHHHHHHHHHHcCCCe-EEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 155 NGRFIQRMREKAASLPNV-RLEQGT-VTSLLEENG---TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 155 ~~~l~~~L~~~~~~~~~v-~i~~~~-v~~~~~~~~---~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
...+...|.+.+++.+++ +++.++ |+++..+++ ++.||.+.. .+|+..+++|+.||.|+|++|..
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 345677787777765478 899887 999998777 899998754 67776678899999999999863
No 78
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.08 E-value=8.3e-10 Score=110.32 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=32.4
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTE 89 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~ 89 (520)
.||+|||||++|+++|+.|++ .|++|+|+||....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 489999999999999999999 99999999998643
No 79
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.08 E-value=2e-09 Score=108.37 Aligned_cols=36 Identities=36% Similarity=0.665 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+.++||+|||||++|+++|+.|+++|.+|+|+||..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456899999999999999999999999999999975
No 80
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.06 E-value=8e-10 Score=108.53 Aligned_cols=114 Identities=16% Similarity=0.225 Sum_probs=75.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+++|||+||||||||+++|+.|+|.|++|+|+|+... .| .+. ... .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-----gg-~~~----------------~~~-----~------- 49 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-----RN-RVT----------------QNS-----H------- 49 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-----GG-GGS----------------SCB-----C-------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-----CC-eee----------------eec-----C-------
Confidence 5679999999999999999999999999999998631 11 000 000 0
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
.++. .. .+....+.+..++.+.+.+++.+...+++.+...++. ..++...+|++ +.+|.||.
T Consensus 50 ------~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~g~~--~~a~~lii 111 (304)
T 4fk1_A 50 ------GFIT------RD--GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTG--LFEIVTKDHTK--YLAERVLL 111 (304)
T ss_dssp ------CSTT------CT--TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTS--CEEEEETTCCE--EEEEEEEE
T ss_pred ------CccC------CC--CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCC--cEEEEECCCCE--EEeCEEEE
Confidence 0000 00 1223456666677777777888888887777655443 23455677775 55999999
Q ss_pred ecCCcc
Q 009994 212 CDGCFS 217 (520)
Q Consensus 212 AdG~~S 217 (520)
|+|...
T Consensus 112 ATGs~p 117 (304)
T 4fk1_A 112 ATGMQE 117 (304)
T ss_dssp CCCCEE
T ss_pred ccCCcc
Confidence 999753
No 81
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.05 E-value=8.6e-10 Score=110.58 Aligned_cols=33 Identities=24% Similarity=0.374 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC------CeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG------RRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G------~~V~v~Er~~ 87 (520)
+||+|||||++|+++|+.|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 9999999985
No 82
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.03 E-value=7.2e-10 Score=119.88 Aligned_cols=66 Identities=17% Similarity=0.129 Sum_probs=53.4
Q ss_pred cchHHHHHHHHHHHcC-CCeEEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEecCeEEEecCCcchh
Q 009994 154 HNGRFIQRMREKAASL-PNVRLEQGT-VTSLLEENG---TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 154 ~~~~l~~~L~~~~~~~-~~v~i~~~~-v~~~~~~~~---~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
....+...|.+.+++. ++++++.++ ++++..+++ ++.||.+.+ .+|+...++|+.||.|+|+++.+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 3456788888888775 379999987 999888776 899998765 57777788999999999999863
No 83
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.03 E-value=7.4e-10 Score=115.67 Aligned_cols=62 Identities=11% Similarity=0.158 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchhhhh
Q 009994 156 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRS 222 (520)
Q Consensus 156 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~vR~~ 222 (520)
..+.+.|.+.+++. +++++.++ | ++..+++++.+|.+.+.+|+ +.||.||.|+|.+|.++..
T Consensus 119 ~~l~~~L~~~~~~~-gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 119 REIFNFLLKLAREE-GIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHT-TCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHhC-CCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCCcccCcc
Confidence 46778888888654 89999998 8 99888888888877554442 5699999999999987654
No 84
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.02 E-value=3.9e-10 Score=112.01 Aligned_cols=121 Identities=18% Similarity=0.250 Sum_probs=80.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.+.+||+|||||++|+++|+.|+++|++|+|+|+.+.......|...... .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~-------------------------~---- 70 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT-------------------------E---- 70 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS-------------------------E----
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch-------------------------h----
Confidence 45689999999999999999999999999999997521111111000000 0
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEe---CCCcEEEEecCe
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKT---KDGQELRAYAPL 208 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~---~~g~~~~~~ad~ 208 (520)
...++ .+ ...+.+..+...|.+.+.+. +++++.++|+++..+++.+ .+.. .++.. +.+|.
T Consensus 71 ----~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~~~~~---~v~~~~~~~~~~--~~~d~ 133 (338)
T 3itj_A 71 ----IENFP--GF-----PDGLTGSELMDRMREQSTKF-GTEIITETVSKVDLSSKPF---KLWTEFNEDAEP--VTTDA 133 (338)
T ss_dssp ----ECCST--TC-----TTCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECSSSSE---EEEETTCSSSCC--EEEEE
T ss_pred ----hcccC--CC-----cccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEcCCEE---EEEEEecCCCcE--EEeCE
Confidence 00111 00 01245567888888888887 8999999988888776653 3444 24443 56999
Q ss_pred EEEecCCcch
Q 009994 209 TIVCDGCFSN 218 (520)
Q Consensus 209 vV~AdG~~S~ 218 (520)
+|.|+|..+.
T Consensus 134 vvlAtG~~~~ 143 (338)
T 3itj_A 134 IILATGASAK 143 (338)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCCcC
Confidence 9999998654
No 85
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.01 E-value=2.3e-09 Score=105.29 Aligned_cols=115 Identities=18% Similarity=0.278 Sum_probs=80.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
+||+|||||++|+++|..|++.|+ +|+|+|+.. . .|..... . .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~----gg~~~~~---------~----------------------~ 45 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-P----GGQITGS---------S----------------------E 45 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-T----TCGGGGC---------S----------------------C
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-C----Ccccccc---------c----------------------c
Confidence 699999999999999999999999 999999962 1 1111100 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
. ..++ .+ ...+++..+.+.|.+.+.+. +++++.++|+++..+++. +++...+|++ +++|.||.|+
T Consensus 46 ~--~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~~~vv~At 110 (311)
T 2q0l_A 46 I--ENYP--GV-----KEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH---FVILAEDGKT--FEAKSVIIAT 110 (311)
T ss_dssp B--CCST--TC-----CSCBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEETTE---EEEEETTSCE--EEEEEEEECC
T ss_pred c--ccCC--CC-----cccCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEcCCE---EEEEEcCCCE--EECCEEEECC
Confidence 0 0011 00 01245667888888888876 799888779999877763 4455566764 5699999999
Q ss_pred CCcchhh
Q 009994 214 GCFSNLR 220 (520)
Q Consensus 214 G~~S~vR 220 (520)
|.++...
T Consensus 111 G~~~~~~ 117 (311)
T 2q0l_A 111 GGSPKRT 117 (311)
T ss_dssp CEEECCC
T ss_pred CCCCCCC
Confidence 9877543
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.01 E-value=1.5e-09 Score=112.78 Aligned_cols=157 Identities=18% Similarity=0.238 Sum_probs=85.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceec------
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVL------ 124 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~------ 124 (520)
..+||+||||||+|+++|..|++.|. +|+|+||..... |......... ..+++.............
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~G----G~~~~~~~~~--~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG----GVWNYTSTLS--NKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSS----TTCSCCSCCC--SCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCC----CeecCCCCCC--cccccccccccccccccccccccC
Confidence 45899999999999999999999999 999999985321 1110000000 000000000000000000
Q ss_pred e--EEEE----ECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-
Q 009994 125 G--YALF----KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT- 196 (520)
Q Consensus 125 ~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~- 196 (520)
. ...+ .+.......++...+... .....++..+.+.|.+.+++. +..+++++ |+++..+++.+. |++.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~~~-V~~~~~ 155 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGSWV-VTYKGT 155 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTEEE-EEEEES
T ss_pred CccCchhhhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCeEE-EEEeec
Confidence 0 0000 000000011110000011 112356778888898888776 56777776 999988777533 55543
Q ss_pred CCCc-EEEEecCeEEEecCCcch
Q 009994 197 KDGQ-ELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 197 ~~g~-~~~~~ad~vV~AdG~~S~ 218 (520)
.+|+ ..++.+|.||.|+|.+|.
T Consensus 156 ~~G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 156 KAGSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp STTCCEEEEEESEEEECCCSSSS
T ss_pred CCCCeeEEEEeCEEEECCCCCCC
Confidence 2365 445779999999999874
No 87
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.00 E-value=7.3e-09 Score=108.30 Aligned_cols=67 Identities=22% Similarity=0.351 Sum_probs=47.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeee------------ee---ccchHHHHHhcCchhH
Q 009994 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGE------------LL---QPGGYLKLVELGLEDC 114 (520)
Q Consensus 50 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~------------~l---~~~~~~~l~~lGl~~~ 114 (520)
+...++||+|||||++||++|+.|+++|++|+|+|++.....+.... .+ .+...+.++++|+.+.
T Consensus 12 ~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 12 PRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLEGR 91 (478)
T ss_dssp -----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCGGG
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCcce
Confidence 33556899999999999999999999999999999987543322111 11 2455688899998754
Q ss_pred Hh
Q 009994 115 VE 116 (520)
Q Consensus 115 l~ 116 (520)
+.
T Consensus 92 ~~ 93 (478)
T 2ivd_A 92 IR 93 (478)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 88
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.00 E-value=2.1e-09 Score=120.25 Aligned_cols=69 Identities=25% Similarity=0.351 Sum_probs=53.1
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchh-hhhhcC
Q 009994 151 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRSLCK 225 (520)
Q Consensus 151 ~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~v-R~~l~~ 225 (520)
..++...+.+.|.+.+++. |++++.++ |+++..+++++.+|. +.+| +++||.||.|+|.+|.. .+.++.
T Consensus 146 g~v~p~~l~~~L~~~a~~~-Gv~i~~~t~V~~i~~~~~~v~~V~--t~~G---~i~Ad~VV~AaG~~s~~l~~~~g~ 216 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESA-GVTYRGSTTVTGIEQSGGRVTGVQ--TADG---VIPADIVVSCAGFWGAKIGAMIGM 216 (830)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTE---EEECSEEEECCGGGHHHHHHTTTC
T ss_pred ceEcHHHHHHHHHHHHHHc-CCEEECCceEEEEEEeCCEEEEEE--ECCc---EEECCEEEECCccchHHHHHHhCC
Confidence 3457778999999999887 79999887 999998888755443 4555 46799999999999853 344444
No 89
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.95 E-value=7.9e-10 Score=109.81 Aligned_cols=119 Identities=18% Similarity=0.204 Sum_probs=78.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.+||+||||||+|+++|+.|++.|++|+|+|+.........|. +. .. .. .
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~-~~-----------------~~--~~-----~----- 57 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ-LT-----------------TT--TD-----V----- 57 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG-GG-----------------GC--SE-----E-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce-ee-----------------ec--cc-----c-----
Confidence 5799999999999999999999999999999831110010110 00 00 00 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..++ .+ ...+++..+...|.+.+.+. +++++.++|+++..+++. +++.. +|+ ++++|+||.|+
T Consensus 58 ---~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~---~~v~~-~~~--~~~~~~vv~A~ 120 (333)
T 1vdc_A 58 ---ENFP--GF-----PEGILGVELTDKFRKQSERF-GTTIFTETVTKVDFSSKP---FKLFT-DSK--AILADAVILAI 120 (333)
T ss_dssp ---CCST--TC-----TTCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECSSSS---EEEEC-SSE--EEEEEEEEECC
T ss_pred ---ccCC--CC-----ccCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEcCCE---EEEEE-CCc--EEEcCEEEECC
Confidence 0011 00 01245567888888888776 799998888888766554 33444 554 46699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|.++..
T Consensus 121 G~~~~~ 126 (333)
T 1vdc_A 121 GAVAKR 126 (333)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 998754
No 90
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.94 E-value=3.4e-09 Score=104.43 Aligned_cols=113 Identities=22% Similarity=0.163 Sum_probs=77.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
+.+||+|||||++|+++|+.|++.|++|+|+|+. . |..+.. ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~-----gg~~~~------------------------------~~ 56 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P-----GGQLTE------------------------------AG 56 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T-----TGGGGG------------------------------CC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C-----CCeecc------------------------------cc
Confidence 4589999999999999999999999999999996 1 111100 00
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
. ...++. + ..+....+.+.+.+.+.+. +++++..+|+++..+++. +.+...+|++ +.+|.||.|
T Consensus 57 ~--~~~~~~--~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~d~lvlA 120 (323)
T 3f8d_A 57 I--VDDYLG--L------IEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENRGDE---FVVKTKRKGE--FKADSVILG 120 (323)
T ss_dssp E--ECCSTT--S------TTEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC--C---EEEEESSSCE--EEEEEEEEC
T ss_pred c--ccccCC--C------CCCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEecCCE---EEEEECCCCE--EEcCEEEEC
Confidence 0 000110 0 0134567888888888877 788888669999877654 4456666664 569999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
+|....
T Consensus 121 tG~~~~ 126 (323)
T 3f8d_A 121 IGVKRR 126 (323)
T ss_dssp CCCEEC
T ss_pred cCCCCc
Confidence 998753
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.94 E-value=3.1e-09 Score=105.15 Aligned_cols=116 Identities=20% Similarity=0.266 Sum_probs=79.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.. | +... .... .. ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~-----g------G~~~--------~~~~--~~-----~~----- 55 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL-----G------GQLS--------ALYP--EK-----YI----- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS-----C------HHHH--------HHCT--TS-----EE-----
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC-----C------ceeh--------hcCC--Cc-----eE-----
Confidence 479999999999999999999999999999998531 1 1100 0000 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..++ .+ ..+.+..+...+.+.+.+. +++++.++ |+++..+++. .+.+...+|+ +.+|.||.|
T Consensus 56 ---~~~~--~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~---~~~d~vVlA 118 (332)
T 3lzw_A 56 ---YDVA--GF------PKIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQADG--VFKLVTNEET---HYSKTVIIT 118 (332)
T ss_dssp ---CCST--TC------SSEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEECTTS--CEEEEESSEE---EEEEEEEEC
T ss_pred ---eccC--CC------CCCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEECCCC--cEEEEECCCE---EEeCEEEEC
Confidence 0011 00 0134567888888888877 79998765 9999877652 2445566664 669999999
Q ss_pred cCCcc
Q 009994 213 DGCFS 217 (520)
Q Consensus 213 dG~~S 217 (520)
+|.+|
T Consensus 119 tG~~~ 123 (332)
T 3lzw_A 119 AGNGA 123 (332)
T ss_dssp CTTSC
T ss_pred CCCCc
Confidence 99965
No 92
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.93 E-value=3.4e-09 Score=104.93 Aligned_cols=116 Identities=20% Similarity=0.278 Sum_probs=77.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
..+||+||||||+|+++|..|++.|++|+|+|+.. . |..+... +
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~-----gg~~~~~--------~---------------------- 50 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-P-----GGQIAWS--------E---------------------- 50 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T-----TGGGGGC--------S----------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-C-----Ccccccc--------c----------------------
Confidence 45899999999999999999999999999999972 1 1100000 0
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEee--CCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEE--NGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~--~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
.. ..++ .+. ..+++..+.+.+.+.+++. +++++.++|+++..+ ++.. +++...+|++ +.+|+||
T Consensus 51 ~~--~~~~--~~~-----~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~~--~~v~~~~g~~--~~~~~vv 116 (325)
T 2q7v_A 51 EV--ENFP--GFP-----EPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHPY--PFTVRGYNGE--YRAKAVI 116 (325)
T ss_dssp CB--CCST--TCS-----SCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSSC--CEEEEESSCE--EEEEEEE
T ss_pred cc--ccCC--CCC-----CCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCce--EEEEECCCCE--EEeCEEE
Confidence 00 0011 000 0234567888888888877 788888779888766 3320 2233445653 5699999
Q ss_pred EecCCcch
Q 009994 211 VCDGCFSN 218 (520)
Q Consensus 211 ~AdG~~S~ 218 (520)
.|+|..+.
T Consensus 117 ~AtG~~~~ 124 (325)
T 2q7v_A 117 LATGADPR 124 (325)
T ss_dssp ECCCEEEC
T ss_pred ECcCCCcC
Confidence 99998764
No 93
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.92 E-value=6.7e-09 Score=102.49 Aligned_cols=113 Identities=24% Similarity=0.300 Sum_probs=76.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
.++||+|||||++|+++|+.|++.|++|+|+|+.. . .|..... . .
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~----gg~~~~~---------~------~--------------- 59 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-A----GGLTAEA---------P------L--------------- 59 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-T----TGGGGGC---------S------C---------------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-C----Ccccccc---------c------h---------------
Confidence 46899999999999999999999999999999952 1 1100000 0 0
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
. ..++ .+ ..+.+..+.+.+.+.+.+. +++++.++|+++..+++.+ ++.. +++ ++.+|++|.|
T Consensus 60 -~--~~~~--~~------~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~---~v~~-~~~--~~~~~~li~A 121 (319)
T 3cty_A 60 -V--ENYL--GF------KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGGF---DIET-NDD--TYHAKYVIIT 121 (319)
T ss_dssp -B--CCBT--TB------SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEETTEE---EEEE-SSS--EEEEEEEEEC
T ss_pred -h--hhcC--CC------cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEeCCEE---EEEE-CCC--EEEeCEEEEC
Confidence 0 0001 00 1234456777888888877 7999887799988776643 3444 444 3569999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
+|.++.
T Consensus 122 tG~~~~ 127 (319)
T 3cty_A 122 TGTTHK 127 (319)
T ss_dssp CCEEEC
T ss_pred CCCCcc
Confidence 998764
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.87 E-value=6e-09 Score=102.29 Aligned_cols=114 Identities=23% Similarity=0.296 Sum_probs=76.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
++||+||||||+|+++|..|++.|++|+|+|+... |.... ..++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g------G~~~~--------~~~~---------------------- 44 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG------GQILD--------TVDI---------------------- 44 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT------GGGGG--------CCEE----------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC------ceecc--------cccc----------------------
Confidence 37999999999999999999999999999986421 11000 0000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC--CeEEEEEEEeCCCcEEEEecCeEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN--GTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~--~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
..+. . ....++..+...+.+.+++. +++++.++ |+.+..+. +. .+.+...+|++ +.+|.+|
T Consensus 45 ---~~~~-----~---~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~--~~~v~~~~g~~--~~~~~lv 108 (310)
T 1fl2_A 45 ---ENYI-----S---VPKTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGG--LHQIETASGAV--LKARSII 108 (310)
T ss_dssp ---CCBT-----T---BSSEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTC--CEEEEETTSCE--EEEEEEE
T ss_pred ---cccc-----C---cCCCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCc--eEEEEECCCCE--EEeCEEE
Confidence 0000 0 00123456777888888776 89999994 98886542 11 23455667754 5699999
Q ss_pred EecCCcchh
Q 009994 211 VCDGCFSNL 219 (520)
Q Consensus 211 ~AdG~~S~v 219 (520)
.|+|.++..
T Consensus 109 ~AtG~~~~~ 117 (310)
T 1fl2_A 109 VATGAKWRN 117 (310)
T ss_dssp ECCCEEECC
T ss_pred ECcCCCcCC
Confidence 999987643
No 95
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.86 E-value=5.1e-09 Score=109.14 Aligned_cols=148 Identities=17% Similarity=0.211 Sum_probs=83.6
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCe---EEEEccCCCCCCceeeeeecc--chHHHHHhcCchhHHhhcccceeceE
Q 009994 55 TDVIIVGAGVAGAALAHTLGK---DGRR---VHVIERDVTEPDRIVGELLQP--GGYLKLVELGLEDCVEEIDAQQVLGY 126 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~---~G~~---V~v~Er~~~~~~~~~g~~l~~--~~~~~l~~lGl~~~l~~~~~~~~~~~ 126 (520)
+||+||||||+|+++|..|++ .|.+ |+|+|+..... |..... .+. ...|+.. ........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G----G~w~~~~~~g~---~~~g~~~-----~~~~y~~l 70 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG----GQWNYTWRTGL---DENGEPV-----HSSMYRYL 70 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC----GGGSCCSCCSB---CTTSSBC-----CCCCCTTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC----CEeecCCCCCc---cccCCCC-----cCccccch
Confidence 699999999999999999999 9999 99999985321 111100 000 0011100 00000000
Q ss_pred EEEECCccccccCCCcCCCC-----CccceeecchHHHHHHHHHHHcCCCeE--EEece-EEEEEeeCC--eEEEEEEEe
Q 009994 127 ALFKDGKSTRLSYPLEKFHA-----DVSGRSFHNGRFIQRMREKAASLPNVR--LEQGT-VTSLLEENG--TIKGVQYKT 196 (520)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~L~~~~~~~~~v~--i~~~~-v~~~~~~~~--~v~gv~v~~ 196 (520)
..+.......++ ++.. .......++..+.+.|.+.+++. ++. +++++ |+++..+++ .. .|++.+
T Consensus 71 --~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~ 144 (464)
T 2xve_A 71 --WSNGPKECLEFA--DYTFDEHFGKPIASYPPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTF-TVTVQD 144 (464)
T ss_dssp --BCSSCGGGTCBT--TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEE-EEEEEE
T ss_pred --hhcCChhhcccC--CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcE-EEEEEE
Confidence 000000000111 0000 00122356677888888888776 666 77776 999887654 33 355544
Q ss_pred -CCCcEEEEecCeEEEecCCcchhh
Q 009994 197 -KDGQELRAYAPLTIVCDGCFSNLR 220 (520)
Q Consensus 197 -~~g~~~~~~ad~vV~AdG~~S~vR 220 (520)
.+|+..++.+|.||.|+|.+|.-+
T Consensus 145 ~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 145 HTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp TTTTEEEEEEESEEEECCCSSSSBC
T ss_pred cCCCceEEEEcCEEEECCCCCCCCc
Confidence 245445678999999999876543
No 96
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.86 E-value=8.4e-09 Score=102.61 Aligned_cols=115 Identities=26% Similarity=0.356 Sum_probs=76.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+..+||+|||||++|+++|..|++.|++|+|+|+.. ..|..... . .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~~-------------------~-~--------- 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-----FGGALMTT-------------------T-D--------- 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-----CSCGGGSC-------------------S-C---------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-----CCCceecc-------------------c-h---------
Confidence 456899999999999999999999999999999752 11110000 0 0
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEE-EeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQY-KTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v-~~~~g~~~~~~ad~vV 210 (520)
. ..++ .+ ...+.+..+...|.+.+.+. +++++.++++++.. ++. +++ ...+|++ +.+|.||
T Consensus 58 --~--~~~~--~~-----~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~-~~~---~~v~~~~~g~~--~~~d~lv 119 (335)
T 2a87_A 58 --V--ENYP--GF-----RNGITGPELMDEMREQALRF-GADLRMEDVESVSL-HGP---LKSVVTADGQT--HRARAVI 119 (335)
T ss_dssp --B--CCST--TC-----TTCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEEC-SSS---SEEEEETTSCE--EEEEEEE
T ss_pred --h--hhcC--CC-----CCCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEe-CCc---EEEEEeCCCCE--EEeCEEE
Confidence 0 0011 00 01234556777888877776 79999988888776 332 233 4556654 5699999
Q ss_pred EecCCcch
Q 009994 211 VCDGCFSN 218 (520)
Q Consensus 211 ~AdG~~S~ 218 (520)
.|+|.++.
T Consensus 120 iAtG~~~~ 127 (335)
T 2a87_A 120 LAMGAAAR 127 (335)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcc
Confidence 99998764
No 97
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.85 E-value=4.1e-09 Score=111.73 Aligned_cols=135 Identities=16% Similarity=0.195 Sum_probs=83.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHh-hCCCeEEEEccCCCCCCceeeeeeccchHHHHH-hcCchhHHhhcccceeceEEEEE
Q 009994 53 SPTDVIIVGAGVAGAALAHTLG-KDGRRVHVIERDVTEPDRIVGELLQPGGYLKLV-ELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La-~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~-~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
.++||+|||||++|+++|..|+ +.|++|+|+|+.+... | .-... .-|.. ..+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~G----G-------tw~~~~ypg~~-------------~d~-- 60 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPG----G-------TWYWNRYPGAL-------------SDT-- 60 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSC----T-------HHHHCCCTTCE-------------EEE--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCC----C-------cccccCCCCce-------------ecC--
Confidence 3589999999999999999999 9999999999985321 1 00000 00100 000
Q ss_pred CCccccccCCCcC---CCCCccceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009994 131 DGKSTRLSYPLEK---FHADVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRA 204 (520)
Q Consensus 131 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~v--~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~ 204 (520)
... ...+.... ...........+..+.+.|.+.+++. ++ .+++++ |+++..+++.. .+++...+|++ +
T Consensus 61 ~s~--~~~~~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~G~~--i 134 (540)
T 3gwf_A 61 ESH--LYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDDEN-LWEVTTDHGEV--Y 134 (540)
T ss_dssp EGG--GSSCCSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETTTT-EEEEEETTSCE--E
T ss_pred Ccc--eeeeccccccccCCCCcccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCCCC-EEEEEEcCCCE--E
Confidence 000 00011000 00011122456778888888888887 56 677776 99988765411 24566777874 5
Q ss_pred ecCeEEEecCCcchh
Q 009994 205 YAPLTIVCDGCFSNL 219 (520)
Q Consensus 205 ~ad~vV~AdG~~S~v 219 (520)
+||+||.|+|..|.-
T Consensus 135 ~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 135 RAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEEEEEECCCSCCSB
T ss_pred EeCEEEECCcccccC
Confidence 699999999987743
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.85 E-value=8.6e-09 Score=106.23 Aligned_cols=34 Identities=32% Similarity=0.561 Sum_probs=32.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
+||+|||||++|+++|+.|++.|.+|+|+|++..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 6999999999999999999999999999999653
No 99
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.85 E-value=1.1e-08 Score=108.89 Aligned_cols=141 Identities=22% Similarity=0.201 Sum_probs=81.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
..++||+|||||++|+++|+.|++.|++|+|+|+..... |.... + ..-|+.-.... ....+.+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G----G~w~~-~-----~~pg~~~d~~~----~~~~~~f--- 76 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVG----GVWYW-N-----RYPGARCDIES----IEYCYSF--- 76 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----THHHH-C-----CCTTCBCSSCT----TTSSCCS---
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCC----Ccccc-c-----CCCceeecccc----ccccccc---
Confidence 346899999999999999999999999999999985421 10000 0 00000000000 0000000
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCC-CeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLP-NVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
.......++ .......+..+.+.|.+.+++.+ ++.+++++ |+++..+++.. .+++...+|++ ++||+|
T Consensus 77 ~~~~~~~~~-------~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~--~~ad~v 146 (542)
T 1w4x_A 77 SEEVLQEWN-------WTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDR--IRARYL 146 (542)
T ss_dssp CHHHHHHCC-------CCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--EEEEEE
T ss_pred ChhhhhccC-------cccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCE--EEeCEE
Confidence 000000000 01122456677777877776653 25677776 99988765310 24455677764 569999
Q ss_pred EEecCCcchh
Q 009994 210 IVCDGCFSNL 219 (520)
Q Consensus 210 V~AdG~~S~v 219 (520)
|.|+|.+|.-
T Consensus 147 V~AtG~~s~p 156 (542)
T 1w4x_A 147 IMASGQLSVP 156 (542)
T ss_dssp EECCCSCCCC
T ss_pred EECcCCCCCC
Confidence 9999998754
No 100
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.83 E-value=7e-09 Score=102.26 Aligned_cols=114 Identities=17% Similarity=0.228 Sum_probs=76.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.+||+||||||+|+++|..|++.|++|+|+|+.. ..|.... . . .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-----~gg~~~~-----------------~-~--~----------- 48 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-----KGGQLTT-----------------T-T--E----------- 48 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-----TTGGGGG-----------------C-S--B-----------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-----CCceEec-----------------c-h--h-----------
Confidence 5799999999999999999999999999999752 1111000 0 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
. ..++ .+. ..+.+..+.+.+.+.+.+. +++++.++++++..+++.+ ++ ..+|++ +.+|+||.|+
T Consensus 49 ~--~~~~--~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~---~v-~~~~~~--~~~~~lv~At 112 (320)
T 1trb_A 49 V--ENWP--GDP-----NDLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQNRPF---RL-NGDNGE--YTCDALIIAT 112 (320)
T ss_dssp C--CCST--TCC-----SSCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EE-EESSCE--EEEEEEEECC
T ss_pred h--hhCC--CCC-----CCCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEecCCEE---EE-EeCCCE--EEcCEEEECC
Confidence 0 0001 000 1134456777777777776 7999998888887666543 33 345554 5699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|..+..
T Consensus 113 G~~~~~ 118 (320)
T 1trb_A 113 GASARY 118 (320)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 987643
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.83 E-value=1.7e-08 Score=105.03 Aligned_cols=150 Identities=18% Similarity=0.193 Sum_probs=83.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-----CeEEEEccCCCCCCceeeeeeccchH--HHHHhcCchhHHhhcccceece
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDG-----RRVHVIERDVTEPDRIVGELLQPGGY--LKLVELGLEDCVEEIDAQQVLG 125 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G-----~~V~v~Er~~~~~~~~~g~~l~~~~~--~~l~~lGl~~~l~~~~~~~~~~ 125 (520)
..+||+|||||++|+++|..|++.| .+|+||||.+...... +..+....+ ..++.+. .... +...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~-~~~~~~~~~~~~~~~~l~------~~~~-p~~~ 100 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG-NTLVSQSELQISFLKDLV------SLRN-PTSP 100 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG-GGCCSSCBCSSCTTSSSS------TTTC-TTCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC-CCCCCCCcCCcchhhccc------cccC-CCCC
Confidence 4579999999999999999999999 9999999987432111 000000000 0000000 0000 0000
Q ss_pred EEEE----ECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEe--
Q 009994 126 YALF----KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKT-- 196 (520)
Q Consensus 126 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~--~~~v~gv~v~~-- 196 (520)
+.+. ..+.. ..++ ........+..+.+.|...+.+. ++.+++++ |+++..+ +++...+++..
T Consensus 101 ~~~~~~l~~~~~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~ 171 (463)
T 3s5w_A 101 YSFVNYLHKHDRL--VDFI------NLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRN 171 (463)
T ss_dssp TSHHHHHHHTTCH--HHHH------HHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CChhHhhhhcCce--eecc------cccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEec
Confidence 0000 00000 0000 00011235667888888888776 57888887 9888765 24443345544
Q ss_pred CCCcEEEEecCeEEEecCCcchh
Q 009994 197 KDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 197 ~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+|+..++++|.||.|+|....+
T Consensus 172 g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 172 ADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp TTSCEEEEEESEEEECCCCEECC
T ss_pred CCCceEEEEeCEEEECCCCCCCC
Confidence 33555568899999999985543
No 102
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.82 E-value=1.1e-08 Score=102.85 Aligned_cols=136 Identities=17% Similarity=0.214 Sum_probs=77.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCCCCCCceeeeee-ccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPDRIVGELL-QPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~~~~~~~~g~~l-~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
++||+|||||++|+++|..|++.|. +|+|+|+.. .. +... .+.....+.. ... ....++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~G----g~~~~~~~~~~~~~~-~~~--------~~~~g~~---- 65 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VG----HSFKHWPKSTRTITP-SFT--------SNGFGMP---- 65 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TT----HHHHTSCTTCBCSSC-CCC--------CGGGTCC----
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CC----CccccCcccccccCc-chh--------cccCCch----
Confidence 5799999999999999999999999 999999984 11 1000 0000000000 000 0000000
Q ss_pred CccccccCCCcCCCC--CccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCe
Q 009994 132 GKSTRLSYPLEKFHA--DVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPL 208 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~ 208 (520)
........... ......+.+..+...+.+.+++. +++++.++ |+++..+++. +.+...+|+ +.+|.
T Consensus 66 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~---~~~d~ 134 (369)
T 3d1c_A 66 ----DMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISADDAY---YTIATTTET---YHADY 134 (369)
T ss_dssp ----CTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCC---EEEEE
T ss_pred ----hhhhccccccccccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEECCCe---EEEEeCCCE---EEeCE
Confidence 00000000000 00011234456777787777776 78999886 9988876653 345555553 56999
Q ss_pred EEEecCCcch
Q 009994 209 TIVCDGCFSN 218 (520)
Q Consensus 209 vV~AdG~~S~ 218 (520)
||.|+|.++.
T Consensus 135 vVlAtG~~~~ 144 (369)
T 3d1c_A 135 IFVATGDYNF 144 (369)
T ss_dssp EEECCCSTTS
T ss_pred EEECCCCCCc
Confidence 9999998763
No 103
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.80 E-value=1.6e-08 Score=99.39 Aligned_cols=119 Identities=19% Similarity=0.325 Sum_probs=75.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
..|||+||||||||+++|..|++.|++|+|+|+... .+.. +++. +... .. +
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~-----gg~~--~~G~-----------~~~~--~~-----i---- 53 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA-----GGVA--AGGQ-----------LTTT--TI-----I---- 53 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG-----GGCC--TTCG-----------GGGS--SE-----E----
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-----CCcc--cCCC-----------cCCh--HH-----h----
Confidence 358999999999999999999999999999998742 1111 1110 0000 00 0
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..++ .+. ..+...++...+.+.+.+. ++++...++.....+.+. ..+...++.+ +.+|.+|.|
T Consensus 54 ----~~~~--g~~-----~~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~---~~~~~~~~~~--~~~~~liiA 116 (314)
T 4a5l_A 54 ----ENFP--GFP-----NGIDGNELMMNMRTQSEKY-GTTIITETIDHVDFSTQP---FKLFTEEGKE--VLTKSVIIA 116 (314)
T ss_dssp ----CCST--TCT-----TCEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSS---EEEEETTCCE--EEEEEEEEC
T ss_pred ----hhcc--CCc-----ccCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecCCCc---eEEEECCCeE--EEEeEEEEc
Confidence 0011 000 0133456777777777776 688888777776655543 2233455554 559999999
Q ss_pred cCCcc
Q 009994 213 DGCFS 217 (520)
Q Consensus 213 dG~~S 217 (520)
+|...
T Consensus 117 TG~~~ 121 (314)
T 4a5l_A 117 TGATA 121 (314)
T ss_dssp CCEEE
T ss_pred ccccc
Confidence 99754
No 104
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.77 E-value=1.5e-08 Score=107.56 Aligned_cols=135 Identities=24% Similarity=0.291 Sum_probs=82.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHH-hcCchhHHhhcccceeceEEEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLV-ELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~-~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
+.++||+|||||++|+++|..|++.|++|+|+|+..... | .-... .-|..-.+.. .
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~G----G-------tw~~~~ypg~~~dv~s------~------ 75 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVG----G-------VWYWNRYPGARCDVES------I------ 75 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC----T-------HHHHCCCTTCBCSSCT------T------
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCC----C-------ccccCCCCCceeCCCc------h------
Confidence 446899999999999999999999999999999975321 1 00000 0011000000 0
Q ss_pred CCccccccCCCcC---CCCCccceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEE
Q 009994 131 DGKSTRLSYPLEK---FHADVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRA 204 (520)
Q Consensus 131 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~v--~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~ 204 (520)
...+.... ...........+..+.+.|.+.+++. ++ .+++++ |+++..+++.. .+++...+|++ +
T Consensus 76 -----~y~~~f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~w~V~~~~G~~--i 146 (549)
T 4ap3_A 76 -----DYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGL-RWTVRTDRGDE--V 146 (549)
T ss_dssp -----TSSCCSCHHHHHHCCCSSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--E
T ss_pred -----hcccccccccccCCCCccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCC-EEEEEECCCCE--E
Confidence 00000000 00001112345677888888888877 55 677776 99988665421 24566677874 5
Q ss_pred ecCeEEEecCCcch
Q 009994 205 YAPLTIVCDGCFSN 218 (520)
Q Consensus 205 ~ad~vV~AdG~~S~ 218 (520)
+||+||.|+|..|.
T Consensus 147 ~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 147 SARFLVVAAGPLSN 160 (549)
T ss_dssp EEEEEEECCCSEEE
T ss_pred EeCEEEECcCCCCC
Confidence 69999999998764
No 105
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.76 E-value=5.9e-09 Score=108.69 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=81.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccc---hHHHHHhcCchhHHhhcccceeceEEEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPG---GYLKLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~---~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
++||+||||||+|+++|..|++.|++|+|+||.. . .|..++.+ ....+...++.+.+.... ...++. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~----gG~~~~~g~~psk~ll~~~~~~~~~~~~~--~~~g~~--~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-W----GGVCLNVGCIPSKALLRNAELVHIFTKDA--KAFGIS--G 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-T----THHHHHHSHHHHHHHHHHHHHHHHHHHHT--TTTTEE--E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-C----CCcccccCchhhHHHHHHHHHHHHHHHHH--HhcCCC--C
Confidence 4799999999999999999999999999999972 1 12222221 112333334443332100 011221 0
Q ss_pred CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
.. . ..++ .... ..... ...+.+.+.+.+++. +++++.++.+. .+++ .+++...+|+..++++|.+|
T Consensus 74 ~~-~--~~~~--~~~~-~~~~~--~~~l~~~l~~~~~~~-gv~~~~g~~~~--id~~---~v~V~~~~G~~~~~~~d~lV 139 (464)
T 2a8x_A 74 EV-T--FDYG--IAYD-RSRKV--AEGRVAGVHFLMKKN-KITEIHGYGTF--ADAN---TLLVDLNDGGTESVTFDNAI 139 (464)
T ss_dssp CC-E--ECHH--HHHH-HHHHH--HHHHHHHHHHHHHHT-TCEEECEEEEE--SSSS---EEEEEETTSCCEEEEEEEEE
T ss_pred CC-c--cCHH--HHHH-HHHHH--HHHHHHHHHHHHHhC-CCEEEEeEEEE--ecCC---eEEEEeCCCceEEEEcCEEE
Confidence 00 0 0000 0000 00000 123455566666665 89999988443 2334 35566677743457799999
Q ss_pred EecCCcchhh
Q 009994 211 VCDGCFSNLR 220 (520)
Q Consensus 211 ~AdG~~S~vR 220 (520)
.|+|.++...
T Consensus 140 iAtG~~~~~~ 149 (464)
T 2a8x_A 140 IATGSSTRLV 149 (464)
T ss_dssp ECCCEEECCC
T ss_pred ECCCCCCCCC
Confidence 9999987544
No 106
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.75 E-value=3e-08 Score=103.52 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTE 89 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~~~ 89 (520)
+||+|||||++||++|+.|+++|. +|+|+|++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 699999999999999999999999 99999997643
No 107
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.73 E-value=3.2e-08 Score=104.60 Aligned_cols=115 Identities=23% Similarity=0.331 Sum_probs=77.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+..+||+||||||+|+++|+.|++.|++|+|+|+... |.... ..++.
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G------G~~~~--------~~~~~------------------- 256 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG------GQVLD--------TVDIE------------------- 256 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT------GGGTT--------CSCBC-------------------
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC------Ccccc--------ccccc-------------------
Confidence 4578999999999999999999999999999987421 11000 00100
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC--CeEEEEEEEeCCCcEEEEecCe
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN--GTIKGVQYKTKDGQELRAYAPL 208 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~--~~v~gv~v~~~~g~~~~~~ad~ 208 (520)
.+. .. .......+...|.+.+++. +++++.++ |+++..+. +. .+++...+|+. +++|.
T Consensus 257 ------~~~--~~------~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~--~~~V~~~~g~~--~~~d~ 317 (521)
T 1hyu_A 257 ------NYI--SV------PKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGG--LHQIETASGAV--LKARS 317 (521)
T ss_dssp ------CBT--TB------SSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTS--CEEEEETTSCE--EEEEE
T ss_pred ------ccC--CC------CCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCc--eEEEEECCCCE--EEcCE
Confidence 000 00 0123456778888888877 89999995 98886432 21 23455667764 56999
Q ss_pred EEEecCCcch
Q 009994 209 TIVCDGCFSN 218 (520)
Q Consensus 209 vV~AdG~~S~ 218 (520)
||.|+|.++.
T Consensus 318 vVlAtG~~~~ 327 (521)
T 1hyu_A 318 IIIATGAKWR 327 (521)
T ss_dssp EEECCCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998764
No 108
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.73 E-value=3.2e-08 Score=104.99 Aligned_cols=140 Identities=17% Similarity=0.119 Sum_probs=80.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
+.++||+|||||++|+++|..|++.|++|+|+|++......-. ..-.|+. ........... .+ .
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~-~~~yPg~-----~~d~~~~~y~~--------~f--~ 70 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY-WNRYPGC-----RLDTESYAYGY--------FA--L 70 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH-HCCCTTC-----BCSSCHHHHCH--------HH--H
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc-cCCCCce-----eecCchhhccc--------cc--C
Confidence 3468999999999999999999999999999999853211000 0000000 00000000000 00 0
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCe
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPL 208 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v--~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~ 208 (520)
..+... .........+..+...+.+.+++. ++ .+++++ |+++..+++.. .+++...+|++ ++||+
T Consensus 71 ------~~~~~~--~~~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~--~~ad~ 138 (545)
T 3uox_A 71 ------KGIIPE--WEWSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDR-LWEVTLDNEEV--VTCRF 138 (545)
T ss_dssp ------TTSSTT--CCCSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGT-EEEEEETTTEE--EEEEE
T ss_pred ------cccccC--CCccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCC-EEEEEECCCCE--EEeCE
Confidence 000000 011112345667778888777765 44 567776 88887654321 24566677864 56999
Q ss_pred EEEecCCcchh
Q 009994 209 TIVCDGCFSNL 219 (520)
Q Consensus 209 vV~AdG~~S~v 219 (520)
||.|+|..|.-
T Consensus 139 lV~AtG~~s~p 149 (545)
T 3uox_A 139 LISATGPLSAS 149 (545)
T ss_dssp EEECCCSCBC-
T ss_pred EEECcCCCCCC
Confidence 99999987643
No 109
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.73 E-value=3e-08 Score=97.52 Aligned_cols=35 Identities=31% Similarity=0.412 Sum_probs=33.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
..+|||+||||||||+++|..|++.|++|+|+||.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 35799999999999999999999999999999986
No 110
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.70 E-value=2.5e-08 Score=104.40 Aligned_cols=34 Identities=29% Similarity=0.545 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++.|.+|+|+|++.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~ 39 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999964
No 111
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=2.8e-08 Score=103.73 Aligned_cols=144 Identities=15% Similarity=0.132 Sum_probs=78.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchH---HHHHhcCchhHHhhcccceeceEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGY---LKLVELGLEDCVEEIDAQQVLGYAL 128 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~---~~l~~lGl~~~l~~~~~~~~~~~~~ 128 (520)
+.++||+|||||++|+++|..|++.|.+|+|+|+.+... |..+..+.. ..+....+.+.+... ....+...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G----G~~~~~g~~p~k~l~~~~~~~~~~~~~--~~~~g~~~ 77 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG----GTCLNVGCIPSKALLHSSHMYHEAKHS--FANHGVKV 77 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC----CSHHHHSHHHHHHHHHHHHHHHHHHHT--HHHHTEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc----ccccCcCccchHHHHHHHHHHHHHHHH--HHhcCccc
Confidence 346899999999999999999999999999999985321 211111111 111111111111110 00011110
Q ss_pred EECCccccccCCCcCCCCCccceeec-----chHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEE
Q 009994 129 FKDGKSTRLSYPLEKFHADVSGRSFH-----NGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELR 203 (520)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~ 203 (520)
.... ..+ ...+. ...+...+.+.+++. +++++.++++.+ +.+ .+++...+|+..+
T Consensus 78 --~~~~--~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~~~v~~~~G~~~~ 137 (470)
T 1dxl_A 78 --SNVE--IDL----------AAMMGQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFV--SPS---EISVDTIEGENTV 137 (470)
T ss_dssp --SCEE--ECH----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEESCEEEE--ETT---EEEECCSSSCCEE
T ss_pred --CCCc--cCH----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeEEEEe--cCC---EEEEEeCCCceEE
Confidence 0000 000 00010 112334445555554 799999985443 344 3556566674345
Q ss_pred EecCeEEEecCCcchhhh
Q 009994 204 AYAPLTIVCDGCFSNLRR 221 (520)
Q Consensus 204 ~~ad~vV~AdG~~S~vR~ 221 (520)
+++|.+|.|+|.++.+..
T Consensus 138 i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 138 VKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp EECSEEEECCCEEECCBT
T ss_pred EEcCEEEECCCCCCCCCC
Confidence 789999999998876544
No 112
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.68 E-value=6.7e-08 Score=101.41 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=31.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++++||+||||||+|+++|..|++.|.+|+|+||..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 58 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRS 58 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 456999999999999999999999999999999874
No 113
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.65 E-value=1.3e-07 Score=92.53 Aligned_cols=113 Identities=23% Similarity=0.361 Sum_probs=74.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEE-EccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHV-IERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v-~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
..+||+|||||++|+++|..|+++|++|+| +||.. . .|...... .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~----gG~~~~~~--------~--------------------- 48 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-P----GGQITSSS--------E--------------------- 48 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-T----TGGGGGCS--------C---------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-C----Cceeeeec--------e---------------------
Confidence 457999999999999999999999999999 99942 1 11100000 0
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeC--CeEEEEEEEeCCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEN--GTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~--~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
...+|. . ...+....+...+.+.+.+. +++++.++|+++ .++ +. +.++..++. ++.+|.+
T Consensus 49 ----~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~---~~v~~~~~~--~~~~d~l 110 (315)
T 3r9u_A 49 ----IENYPG--V-----AQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGS---FTIKLEGGK--TELAKAV 110 (315)
T ss_dssp ----BCCSTT--C-----CSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSC---EEEEETTSC--EEEEEEE
T ss_pred ----eccCCC--C-----CCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCc---EEEEEecCC--EEEeCEE
Confidence 000110 0 01234556788888888877 799999888888 555 43 332122233 5679999
Q ss_pred EEecCCcc
Q 009994 210 IVCDGCFS 217 (520)
Q Consensus 210 V~AdG~~S 217 (520)
|.|+|...
T Consensus 111 vlAtG~~~ 118 (315)
T 3r9u_A 111 IVCTGSAP 118 (315)
T ss_dssp EECCCEEE
T ss_pred EEeeCCCC
Confidence 99999743
No 114
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.65 E-value=9.2e-09 Score=102.14 Aligned_cols=115 Identities=21% Similarity=0.235 Sum_probs=69.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc-----eeeeee---ccchHHHHHhcCc-hhHHhhcccceece
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR-----IVGELL---QPGGYLKLVELGL-EDCVEEIDAQQVLG 125 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~-----~~g~~l---~~~~~~~l~~lGl-~~~l~~~~~~~~~~ 125 (520)
+||+|||||++|+.+|+.|++.|.+|+|+|+++..... ..++.. +.+|...+...|+ .++++..+......
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~~ 81 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEA 81 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhhh
Confidence 58999999999999999999999999999997632111 111111 1122222222232 23333221110000
Q ss_pred EEEEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEE
Q 009994 126 YALFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLL 183 (520)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~ 183 (520)
... ...| . .....++|..|.+.+.+.++++|++++++++|+++.
T Consensus 82 ------aD~--~~ip-----A-g~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~ 125 (443)
T 3g5s_A 82 ------ADL--ARVP-----A-GGALAVDREEFSGYITERLTGHPLLEVVREEVREIP 125 (443)
T ss_dssp ------HHH--SEEC-----C-TTEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC
T ss_pred ------hhh--cCCC-----C-CccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc
Confidence 000 0001 0 111358999999999999999999999988877764
No 115
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.64 E-value=1.6e-07 Score=101.07 Aligned_cols=54 Identities=11% Similarity=0.210 Sum_probs=43.3
Q ss_pred CCeEEEece-EEEEEeeC--CeEEEEEEEe-CCCcEEEEecCeEEEecCCcchhhhhh
Q 009994 170 PNVRLEQGT-VTSLLEEN--GTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNLRRSL 223 (520)
Q Consensus 170 ~~v~i~~~~-v~~~~~~~--~~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~S~vR~~l 223 (520)
+|++++.++ |+++..++ +++++|++.+ .+|+..+++||.||.|.|.....+-.+
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 378899887 89998764 3788999987 578878899999999999887665443
No 116
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.63 E-value=2.9e-07 Score=96.56 Aligned_cols=63 Identities=19% Similarity=0.319 Sum_probs=46.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceee------------eee---ccchHHHHHhcCchhHH
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVG------------ELL---QPGGYLKLVELGLEDCV 115 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g------------~~l---~~~~~~~l~~lGl~~~l 115 (520)
+++||+|||||++||++|..|++.|++|+|+|++.....+... ..+ ++...+.++++|+.+.+
T Consensus 38 ~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~ 115 (495)
T 2vvm_A 38 GPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNAL 115 (495)
T ss_dssp CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCE
T ss_pred cCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCccee
Confidence 3489999999999999999999999999999998654332211 111 34555677788885443
No 117
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.62 E-value=1.4e-07 Score=98.55 Aligned_cols=62 Identities=18% Similarity=0.231 Sum_probs=46.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--CeEEEEccCCCCCCcee-----e-------e---eeccchHHHHHhcCchhHH
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIV-----G-------E---LLQPGGYLKLVELGLEDCV 115 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~~~~~~~~-----g-------~---~l~~~~~~~l~~lGl~~~l 115 (520)
.+||+|||||++||++|+.|+++| .+|+|+|++.....+.. | . ...+...+.++++|+.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999754322110 1 0 1234556788899987654
No 118
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.62 E-value=7.1e-08 Score=100.53 Aligned_cols=133 Identities=21% Similarity=0.162 Sum_probs=74.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHH---HHHhcCchhHHhhcccceeceEEEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYL---KLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~---~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
++||+|||||++|+++|..|++.|.+|+|+||.... .|..+..+... .+......+.+.....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~----GG~~~~~gciPsk~l~~~a~~~~~~~~~~~---------- 69 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL----GGNCLYSGCVPSKTVREVIQTAWRLTNIAN---------- 69 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS----SHHHHHHSHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC----CCcccccCCCchHHHHHHHHHHHHHHhccc----------
Confidence 589999999999999999999999999999976422 12222211111 0111111111111100
Q ss_pred CCccccccCCCcCCCCCccceeecchHHH-----HHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEe
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFI-----QRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAY 205 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ 205 (520)
.. ..++ .....-....+. ..+.+.+.+. ++++..++++.+. .+ .+++...+|+..++.
T Consensus 70 --~~--~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~g~v~~id--~~---~~~V~~~~g~~~~~~ 132 (466)
T 3l8k_A 70 --VK--IPLD-------FSTVQDRKDYVQELRFKQHKRNMSQYE-TLTFYKGYVKIKD--PT---HVIVKTDEGKEIEAE 132 (466)
T ss_dssp --SC--CCCC-------HHHHHHHHHHHHHHHHHHHHHHHTTCT-TEEEESEEEEEEE--TT---EEEEEETTSCEEEEE
T ss_pred --CC--CCcC-------HHHHHHHHHhheeccccchHHHHHHhC-CCEEEEeEEEEec--CC---eEEEEcCCCcEEEEe
Confidence 00 0000 000000011122 3344444444 8999998876654 33 355667778765577
Q ss_pred cCeEEEecCCcc
Q 009994 206 APLTIVCDGCFS 217 (520)
Q Consensus 206 ad~vV~AdG~~S 217 (520)
+|.+|.|+|...
T Consensus 133 ~d~lviAtG~~p 144 (466)
T 3l8k_A 133 TRYMIIASGAET 144 (466)
T ss_dssp EEEEEECCCEEE
T ss_pred cCEEEECCCCCc
Confidence 999999999643
No 119
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=1e-07 Score=99.02 Aligned_cols=138 Identities=15% Similarity=0.151 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHH---HHHhcCchhHHhhcccceeceEEEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYL---KLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~---~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
++||+|||||++|+++|..|++.|.+|+|+|+.. . .|..++.+... .+....+.+.+... ...+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~----gG~~~~~g~~p~k~l~~~~~~~~~~~~~---~~~g~~~-- 72 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN-L----GGVCLNVGCIPSKALISASHRYEQAKHS---EEMGIKA-- 72 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-T----THHHHHTSHHHHHHHHHHHHHHHHHHTC---GGGTEEC--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC-C----CCcCcCcCchhhHHHHHHHHHHHHHHHH---HhcCccc--
Confidence 4799999999999999999999999999999972 1 12112211111 11111111111111 0011110
Q ss_pred CCccccccCCCcCCCCCccceeecc-----hHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEe
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHN-----GRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAY 205 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ 205 (520)
.... .+ . ...+.+ ..+.+.+.+.+++. +++++.++++.+ +++. +++...+|+ .++.
T Consensus 73 ~~~~----~~-------~-~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~i--d~~~---v~V~~~~G~-~~i~ 133 (455)
T 1ebd_A 73 ENVT----ID-------F-AKVQEWKASVVKKLTGGVEGLLKGN-KVEIVKGEAYFV--DANT---VRVVNGDSA-QTYT 133 (455)
T ss_dssp CSCE----EC-------H-HHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEESEEEEE--ETTE---EEEEETTEE-EEEE
T ss_pred CCCc----cC-------H-HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEc--cCCe---EEEEeCCCc-EEEE
Confidence 0000 00 0 000111 12444455666665 899999985443 3443 556666663 3577
Q ss_pred cCeEEEecCCcchhh
Q 009994 206 APLTIVCDGCFSNLR 220 (520)
Q Consensus 206 ad~vV~AdG~~S~vR 220 (520)
+|.+|.|+|..+..-
T Consensus 134 ~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 134 FKNAIIATGSRPIEL 148 (455)
T ss_dssp CSEEEECCCEEECCB
T ss_pred eCEEEEecCCCCCCC
Confidence 999999999866443
No 120
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.61 E-value=4.6e-08 Score=102.29 Aligned_cols=144 Identities=18% Similarity=0.136 Sum_probs=76.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccc---hHHHHHhcCchhHHhhcccceeceEEEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPG---GYLKLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~---~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
++||+||||||+|+++|..|++.|++|+|+|+.... .|..++.+ +...+...++.+.+... ....+....
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~----GG~~~~~g~~psk~l~~~~~~~~~~~~~--~~~~gi~~~- 77 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL----GGTCLNVGCIPSKALLNNSHLFHQMHTE--AQKRGIDVN- 77 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS----SHHHHHHSHHHHHHHHHHHHHHHHHHHT--SGGGTEEEC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc----CCccceeccHHHHHHHHHHHHHHHHHHH--HHhcCcccC-
Confidence 589999999999999999999999999999996432 12222211 11222333333333210 011122110
Q ss_pred CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEE------E
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELR------A 204 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~------~ 204 (520)
... .++..... ..... ....+...+.+.+++. +++++.++.+.. +++ .+++...+|+..+ +
T Consensus 78 ~~~----~~~~~~~~-~~~~~--~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~v~V~~~~G~~~~~~~~~~i 144 (478)
T 1v59_A 78 GDI----KINVANFQ-KAKDD--AVKQLTGGIELLFKKN-KVTYYKGNGSFE--DET---KIRVTPVDGLEGTVKEDHIL 144 (478)
T ss_dssp SCE----EECHHHHH-HHHHH--HHHHHHHHHHHHHHHT-TCEEEESEEEES--SSS---EEEEECCTTCTTCCSSCEEE
T ss_pred CCC----ccCHHHHH-HHHHH--HHHHHHHHHHHHHHhC-CCEEEEEEEEEc--cCC---eEEEEecCCCcccccccceE
Confidence 000 00000000 00000 0112344455556654 899999984322 333 3556666662123 6
Q ss_pred ecCeEEEecCCcc
Q 009994 205 YAPLTIVCDGCFS 217 (520)
Q Consensus 205 ~ad~vV~AdG~~S 217 (520)
++|.||.|+|.++
T Consensus 145 ~~d~lViAtGs~p 157 (478)
T 1v59_A 145 DVKNIIVATGSEV 157 (478)
T ss_dssp EEEEEEECCCEEE
T ss_pred EeCEEEECcCCCC
Confidence 7999999999876
No 121
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.60 E-value=5.5e-08 Score=99.52 Aligned_cols=110 Identities=20% Similarity=0.257 Sum_probs=70.1
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.+|+|||||++|+++|..|++ .|.+|+|+|+++.. ...+...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~-------~~~~~~~---------------------------- 46 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS-------YFRPALP---------------------------- 46 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE-------EECCSSC----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc-------eeccchh----------------------------
Confidence 379999999999999999999 89999999998510 0111000
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
....... . ..++...+.+.+.+. +++++.++|+++..++.. |++.+.+++..++.+|.||.
T Consensus 47 ------~~~~~~~--~-------~~~~~~~~~~~~~~~-gv~~~~~~v~~i~~~~~~---V~~~~g~~~~~~~~~d~lVi 107 (409)
T 3h8l_A 47 ------HVAIGVR--D-------VDELKVDLSEALPEK-GIQFQEGTVEKIDAKSSM---VYYTKPDGSMAEEEYDYVIV 107 (409)
T ss_dssp ------CCCSSCC--C-------CCCEEEEHHHHTGGG-TCEEEECEEEEEETTTTE---EEEECTTSCEEEEECSEEEE
T ss_pred ------hcccCCc--C-------HHHHHHHHHHHHhhC-CeEEEEeeEEEEeCCCCE---EEEccCCcccceeeCCEEEE
Confidence 0000000 0 000111123333344 799998889888766653 55555555556688999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|+|....
T Consensus 108 AtG~~~~ 114 (409)
T 3h8l_A 108 GIGAHLA 114 (409)
T ss_dssp CCCCEEC
T ss_pred CCCCCcC
Confidence 9998554
No 122
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.59 E-value=2.4e-08 Score=105.55 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=33.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+.++||+||||||+|+++|..|++.|.+|+|+||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 457999999999999999999999999999999964
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.59 E-value=1.2e-07 Score=99.09 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++||+|||||++|+++|+.|++.|.+|+|+||.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~ 36 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYK 36 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 46899999999999999999999999999999985
No 124
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.58 E-value=1.4e-07 Score=98.61 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++||+|||||++|+++|..|++.|.+|+|+|+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 39 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNE 39 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 45899999999999999999999999999999985
No 125
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.57 E-value=2e-07 Score=97.61 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+.+.+.+.+++. |++++.++ |+++..++++ +.+...+|++ +.+|.||.|+|..+..
T Consensus 233 ~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAK-GISIIYEATVSQVQSTENC---YNVVLTNGQT--ICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHH-TCEEESSCCEEEEEECSSS---EEEEETTSCE--EEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHC-CCEEEeCCEEEEEEeeCCE---EEEEECCCcE--EEcCEEEEeeCCCcCC
Confidence 4566677777776 89999987 9999887665 3455677764 5699999999987654
No 126
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.55 E-value=2.7e-08 Score=104.34 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
+.++||+||||||+|+++|..|++.|.+|+|+||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 45699999999999999999999999999999985
No 127
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.55 E-value=4e-07 Score=96.23 Aligned_cols=36 Identities=36% Similarity=0.528 Sum_probs=33.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
.+||+|||||++||++|..|++.|++|+|+|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 579999999999999999999999999999998654
No 128
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.54 E-value=1.6e-07 Score=96.75 Aligned_cols=35 Identities=29% Similarity=0.568 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
+.+||+|||||++|+++|..|++.|. +|+|+|+.+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 35799999999999999999999998 799999875
No 129
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.50 E-value=1.3e-07 Score=98.92 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=69.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.+||+|||||++|+++|..|++. |.+|+|+|+.+..... +.++..+ +..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-------~~~~~~~--------~~~-------------- 86 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA-------QCGLPYV--------ISG-------------- 86 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC-------GGGHHHH--------HTT--------------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC-------CCCcchh--------hcC--------------
Confidence 36999999999999999999996 9999999998532111 1111100 000
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLT 209 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~v 209 (520)
.. ..... ...+ . .+.+.+..+++++.++ |+.+..+++. |++.+ .+|+..++.+|.+
T Consensus 87 -~~----~~~~~--------l~~~--~----~~~~~~~~gv~~~~~~~v~~i~~~~~~---v~v~~~~~g~~~~~~~d~l 144 (480)
T 3cgb_A 87 -AI----ASTEK--------LIAR--N----VKTFRDKYGIDAKVRHEVTKVDTEKKI---VYAEHTKTKDVFEFSYDRL 144 (480)
T ss_dssp -SS----SCGGG--------GBSS--C----HHHHHHTTCCEEESSEEEEEEETTTTE---EEEEETTTCCEEEEECSEE
T ss_pred -Cc----CCHHH--------hhhc--C----HHHHHhhcCCEEEeCCEEEEEECCCCE---EEEEEcCCCceEEEEcCEE
Confidence 00 00000 0000 1 1222222379999876 8888766653 55555 4566456789999
Q ss_pred EEecCCcch
Q 009994 210 IVCDGCFSN 218 (520)
Q Consensus 210 V~AdG~~S~ 218 (520)
|.|+|....
T Consensus 145 viAtG~~p~ 153 (480)
T 3cgb_A 145 LIATGVRPV 153 (480)
T ss_dssp EECCCEEEC
T ss_pred EECCCCccc
Confidence 999997553
No 130
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.49 E-value=3.1e-07 Score=95.68 Aligned_cols=34 Identities=24% Similarity=0.464 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++.|.+|+|+|+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 35 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRG 35 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5799999999999999999999999999999985
No 131
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.48 E-value=4.9e-07 Score=94.16 Aligned_cols=34 Identities=35% Similarity=0.541 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999987
No 132
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.48 E-value=3.5e-07 Score=95.40 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
..||+|||||++|+++|..|++. |.+|+|+|+++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 36899999999999999999998 999999999864
No 133
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.47 E-value=1.6e-07 Score=97.29 Aligned_cols=111 Identities=18% Similarity=0.157 Sum_probs=68.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
+||+|||||++|+++|..|++. |.+|+|+|+.+... ..+.++... +..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~-------~~~~~~~~~--------~~~--------------- 50 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS-------FLSAGMQLY--------LEG--------------- 50 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS-------BCGGGHHHH--------HTT---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC-------cccccchhh--------hcC---------------
Confidence 4899999999999999999998 99999999985321 111111100 000
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTI 210 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV 210 (520)
.. ...... .. .+.+ .+.+. +++++.++ ++.+..++.. |++.+ .+|+..++.+|.+|
T Consensus 51 ~~----~~~~~~--------~~--~~~~----~~~~~-gv~~~~~~~v~~i~~~~~~---v~~~~~~~g~~~~~~~d~lv 108 (447)
T 1nhp_A 51 KV----KDVNSV--------RY--MTGE----KMESR-GVNVFSNTEITAIQPKEHQ---VTVKDLVSGEERVENYDKLI 108 (447)
T ss_dssp SS----CCGGGS--------BS--CCHH----HHHHT-TCEEEETEEEEEEETTTTE---EEEEETTTCCEEEEECSEEE
T ss_pred cc----CCHHHh--------hc--CCHH----HHHHC-CCEEEECCEEEEEeCCCCE---EEEEecCCCceEEEeCCEEE
Confidence 00 000000 00 0112 22334 78987776 8888766653 55555 45665567899999
Q ss_pred EecCCcc
Q 009994 211 VCDGCFS 217 (520)
Q Consensus 211 ~AdG~~S 217 (520)
.|+|...
T Consensus 109 iAtG~~p 115 (447)
T 1nhp_A 109 ISPGAVP 115 (447)
T ss_dssp ECCCEEE
T ss_pred EcCCCCc
Confidence 9999754
No 134
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.46 E-value=1.5e-06 Score=89.82 Aligned_cols=56 Identities=16% Similarity=0.237 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEe-eCCeEEEEEEEeCCCcEEEEecCeEEEecCCc
Q 009994 156 GRFIQRMREKAASLPNVRLEQGT-VTSLLE-ENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 216 (520)
Q Consensus 156 ~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~-~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~ 216 (520)
+.+.+.|.+.+++. |++++.++ |+++.. +++++.+|+ ..+|++ ++||.||.+.|..
T Consensus 256 ~~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g~v~gV~--~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDNKVCGIK--SSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEECTTSCEEEEE--ETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCCeEEEEE--ECCCcE--EECCEEEECCCcc
Confidence 35777888888887 78888887 999987 667766665 466764 5699999999977
No 135
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.45 E-value=1.2e-07 Score=97.98 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=69.7
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~---~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
.||+|||||++|+++|..|++ .|.+|+|+|+.+.. ...+...... .|.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~-------~~~~~~~~~~--~g~-------------------- 55 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF-------QFVPSNPWVG--VGW-------------------- 55 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE-------ECGGGHHHHH--HTS--------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC-------cccCCccccc--cCc--------------------
Confidence 589999999999999999999 89999999998521 1111110000 000
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
.....+...+.+.+++. +++++.++|+++..++.. +...+|++ +.+|+||.
T Consensus 56 ---------------------~~~~~~~~~l~~~~~~~-gv~~~~~~v~~id~~~~~-----V~~~~g~~--i~~d~lvi 106 (437)
T 3sx6_A 56 ---------------------KERDDIAFPIRHYVERK-GIHFIAQSAEQIDAEAQN-----ITLADGNT--VHYDYLMI 106 (437)
T ss_dssp ---------------------SCHHHHEEECHHHHHTT-TCEEECSCEEEEETTTTE-----EEETTSCE--EECSEEEE
T ss_pred ---------------------cCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEcCCCE-----EEECCCCE--EECCEEEE
Confidence 00011111233344444 799988889998766553 33566764 56999999
Q ss_pred ecCCcchhh
Q 009994 212 CDGCFSNLR 220 (520)
Q Consensus 212 AdG~~S~vR 220 (520)
|+|..+..-
T Consensus 107 AtG~~~~~~ 115 (437)
T 3sx6_A 107 ATGPKLAFE 115 (437)
T ss_dssp CCCCEECGG
T ss_pred CCCCCcCcc
Confidence 999876543
No 136
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.45 E-value=2.8e-07 Score=96.94 Aligned_cols=34 Identities=32% Similarity=0.422 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC---CCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++. |.+|+|+|+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999974
No 137
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.43 E-value=4.1e-07 Score=94.38 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 38 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQAT 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5999999999999999999998 999999999863
No 138
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.43 E-value=1.1e-06 Score=91.39 Aligned_cols=57 Identities=12% Similarity=0.133 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEE-eCCCcEEEEecCeEEEecCCcchh
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYK-TKDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~-~~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
.+.+.+.+.+++. |++++.++ |.++..++++. +.+. ..+|+ +.+|.||.|.|..++.
T Consensus 212 ~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~~g~---i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 212 DMRRGLHAAMEEK-GIRILCEDIIQSVSADADGR--RVATTMKHGE---IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSC--EEEEESSSCE---EEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCCE--EEEEEcCCCe---EEeCEEEEeeCcccCC
Confidence 4566777777776 89999987 99998775542 3455 66775 6699999999987643
No 139
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.42 E-value=1.6e-07 Score=98.36 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
+.++||+||||||+|+++|..|++.|.+|+|+||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 45699999999999999999999999999999964
No 140
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.42 E-value=3.5e-07 Score=93.78 Aligned_cols=36 Identities=44% Similarity=0.603 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCe--EEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRR--VHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~--V~v~Er~~~ 88 (520)
+++||+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 457999999999999999999999987 999999863
No 141
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.42 E-value=2.9e-07 Score=95.47 Aligned_cols=34 Identities=26% Similarity=0.261 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
+||+|||||++|+++|..|++. |.+|+|+|++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 5899999999999999999998 999999999863
No 142
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.42 E-value=4.3e-07 Score=94.90 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++||+|||||++|+++|..|++.|.+|+|+||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 45899999999999999999999999999999973
No 143
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.41 E-value=7.1e-07 Score=94.26 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|||+||||||+|+++|..+++.|.+|+|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36999999999999999999999999999999875
No 144
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.41 E-value=2.4e-07 Score=97.18 Aligned_cols=36 Identities=22% Similarity=0.361 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC---CeEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDG---RRVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G---~~V~v~Er~~~ 88 (520)
+++||+|||||++|+++|..|++.| .+|+|+|+...
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~ 72 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSN 72 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCC
Confidence 4589999999999999999999988 99999999853
No 145
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.38 E-value=2.5e-06 Score=89.59 Aligned_cols=63 Identities=14% Similarity=0.105 Sum_probs=46.7
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC-------eEEEEEEEe-CCCcEEEEecCeEEEecCCc
Q 009994 153 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG-------TIKGVQYKT-KDGQELRAYAPLTIVCDGCF 216 (520)
Q Consensus 153 ~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~-------~v~gv~v~~-~~g~~~~~~ad~vV~AdG~~ 216 (520)
..|.++.+.|+..+++. +..+++++ |+++...+. ....|+..+ .+|+..++.|+.||.|+|..
T Consensus 142 p~r~E~~~Yl~~~A~~~-~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQF-SDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CBHHHHHHHHHHHHHTT-GGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCHHHHHHHHHHHHHHc-CCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 56788999999999887 56688887 999875432 123455554 45677778899999999954
No 146
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.38 E-value=4.1e-07 Score=97.64 Aligned_cols=115 Identities=15% Similarity=0.196 Sum_probs=72.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEE
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALF 129 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 129 (520)
+...||+|||||++|+++|..|++. |.+|+|+|+.+... +.+.++.. .+..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~lp~--------~~~g------------ 86 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGLPY--------YIGG------------ 86 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHHH--------HHTT------------
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCCch--------hhcC------------
Confidence 4567999999999999999999998 89999999986432 11111111 0000
Q ss_pred ECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecC
Q 009994 130 KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAP 207 (520)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad 207 (520)
.. .+ . ...+...+...+++. +++++.++ |+++..++.. +.+.. .+|+..++.+|
T Consensus 87 ---~~----~~-------~------~~~~~~~~~~~~~~~-gi~v~~~~~V~~id~~~~~---v~v~~~~~g~~~~~~~d 142 (588)
T 3ics_A 87 ---VI----TE-------R------QKLLVQTVERMSKRF-NLDIRVLSEVVKINKEEKT---ITIKNVTTNETYNEAYD 142 (588)
T ss_dssp ---SS----CC-------G------GGGBSSCHHHHHHHT-TCEEECSEEEEEEETTTTE---EEEEETTTCCEEEEECS
T ss_pred ---cC----CC-------h------HHhhccCHHHHHHhc-CcEEEECCEEEEEECCCCE---EEEeecCCCCEEEEeCC
Confidence 00 00 0 000111122222333 78988776 8888876664 44544 45665667899
Q ss_pred eEEEecCCcc
Q 009994 208 LTIVCDGCFS 217 (520)
Q Consensus 208 ~vV~AdG~~S 217 (520)
.+|.|+|...
T Consensus 143 ~lviAtG~~p 152 (588)
T 3ics_A 143 VLILSPGAKP 152 (588)
T ss_dssp EEEECCCEEE
T ss_pred EEEECCCCCC
Confidence 9999999743
No 147
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.36 E-value=2.7e-06 Score=90.47 Aligned_cols=52 Identities=29% Similarity=0.444 Sum_probs=43.3
Q ss_pred HcCCCeEEEece-EEEEEee--CCeEEEEEEEeCCCcEEEEec-CeEEEecCCcch
Q 009994 167 ASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKTKDGQELRAYA-PLTIVCDGCFSN 218 (520)
Q Consensus 167 ~~~~~v~i~~~~-v~~~~~~--~~~v~gv~v~~~~g~~~~~~a-d~vV~AdG~~S~ 218 (520)
.+.+|++++.++ |+++..+ +++++||++...+|+..+++| +-||.|.|+...
T Consensus 216 ~~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 216 KNKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SSCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred hcCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 345699999998 9999988 788999999887788888888 679999998754
No 148
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.35 E-value=8.3e-07 Score=90.59 Aligned_cols=33 Identities=33% Similarity=0.504 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
.||+|||||++|+++|..|++.|. +|+|+|+.+
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 489999999999999999999999 899999986
No 149
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.35 E-value=6.5e-07 Score=90.76 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
++++|+|||||+||+++|..|++.+.+|+|+|+.+.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 457899999999999999999888999999999864
No 150
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.33 E-value=3.3e-06 Score=87.83 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+... +. .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~---------~---------------------- 208 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL---------PQ---------G---------------------- 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------TT---------S----------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc---------cc---------c----------------------
Confidence 3579999999999999999999999999999975211 00 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCC--CcEEEEecCeEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKD--GQELRAYAPLTI 210 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~--g~~~~~~ad~vV 210 (520)
...+.+.+.+.+++. |++++.++ |+++..+++.+. +++.. + |+..++.+|.||
T Consensus 209 ---------------------~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~~-v~~~~-~~~g~~~~i~~D~vv 264 (464)
T 2eq6_A 209 ---------------------DPETAALLRRALEKE-GIRVRTKTKAVGYEKKKDGLH-VRLEP-AEGGEGEEVVVDKVL 264 (464)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEE-TTCCSCEEEEESEEE
T ss_pred ---------------------CHHHHHHHHHHHHhc-CCEEEcCCEEEEEEEeCCEEE-EEEee-cCCCceeEEEcCEEE
Confidence 012445556666666 89999997 999987766532 44431 4 664457799999
Q ss_pred EecCCcchhh
Q 009994 211 VCDGCFSNLR 220 (520)
Q Consensus 211 ~AdG~~S~vR 220 (520)
.|+|..+...
T Consensus 265 ~a~G~~p~~~ 274 (464)
T 2eq6_A 265 VAVGRKPRTE 274 (464)
T ss_dssp ECSCEEESCT
T ss_pred ECCCcccCCC
Confidence 9999887653
No 151
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.33 E-value=1.3e-06 Score=89.90 Aligned_cols=33 Identities=27% Similarity=0.491 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHhh--CCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGK--DGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~--~G~~V~v~Er~~ 87 (520)
.||+|||||++|+++|..|++ .|++|+|+|+++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~ 37 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 589999999999999999999 899999999985
No 152
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.32 E-value=4.7e-07 Score=89.62 Aligned_cols=38 Identities=39% Similarity=0.521 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhh--CCCeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGK--DGRRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~--~G~~V~v~Er~~~~ 89 (520)
..++||+|||||||||++|+.|++ .|++|+|+||....
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 346899999999999999999974 59999999998643
No 153
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.31 E-value=9.9e-07 Score=91.51 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+||||||+|+++|..|++.|.+|+|+|+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 34 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEK 34 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCC
Confidence 3799999999999999999999999999999985
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.30 E-value=4.8e-06 Score=84.27 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|+.|+.+|..|++.|.+|+|+|+.+.....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 457999999999999999999999999999997521100
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
.....+.+.+.+.+++. |++++.++ |+++..+++. +.+...+|++ +.+|.||.|
T Consensus 184 -------------------~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~~--i~~d~vv~a 238 (384)
T 2v3a_A 184 -------------------LLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEG---LEAHLSDGEV--IPCDLVVSA 238 (384)
T ss_dssp -------------------TSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEEC
T ss_pred -------------------ccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEecCCE---EEEEECCCCE--EECCEEEEC
Confidence 00123556666777776 89999987 9999877663 4555677764 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
+|..+..
T Consensus 239 ~G~~p~~ 245 (384)
T 2v3a_A 239 VGLRPRT 245 (384)
T ss_dssp SCEEECC
T ss_pred cCCCcCH
Confidence 9988764
No 155
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.28 E-value=1.3e-06 Score=91.27 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
+.++||+||||||+|+++|..|++.|.+|+|+||+
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 44689999999999999999999999999999976
No 156
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.28 E-value=2.5e-06 Score=89.30 Aligned_cols=32 Identities=28% Similarity=0.525 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-CCCeEEEEcc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~Er 85 (520)
++||+||||||+|+++|+.|++ .|.+|+|+|+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999994
No 157
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=9.6e-07 Score=91.46 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 46999999999999999999998 889999999863
No 158
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.27 E-value=1.5e-06 Score=90.49 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++.|.+|+|+|+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999974
No 159
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.26 E-value=7.8e-06 Score=86.92 Aligned_cols=52 Identities=23% Similarity=0.371 Sum_probs=42.8
Q ss_pred HHcCCCeEEEece-EEEEEee----CCeEEEEEEEeCCCcEEEEecC-eEEEecCCcc
Q 009994 166 AASLPNVRLEQGT-VTSLLEE----NGTIKGVQYKTKDGQELRAYAP-LTIVCDGCFS 217 (520)
Q Consensus 166 ~~~~~~v~i~~~~-v~~~~~~----~~~v~gv~v~~~~g~~~~~~ad-~vV~AdG~~S 217 (520)
+.+.+|++++.++ |+++..+ +++++||++...+|+..+++|+ -||.|.|+..
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred hhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 3345799999987 9999877 6789999998678888888896 6999999874
No 160
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.25 E-value=1.8e-06 Score=94.96 Aligned_cols=37 Identities=41% Similarity=0.475 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
..+||+|||||++|+++|+.|++.|++|+|+|+....
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 4689999999999999999999999999999997644
No 161
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.24 E-value=2.4e-06 Score=87.99 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=66.3
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
+|+|||||+||+++|..|++.+ .+|+|||+++. ...+|....+.. |..+ .+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~-------~~~~p~l~~v~~--g~~~------------------~~ 56 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY-------FGFTPAFPHLAM--GWRK------------------FE 56 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE-------EECGGGHHHHHH--TCSC------------------GG
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC-------CccCccHHHHhc--CCCC------------------HH
Confidence 6999999999999999999865 89999999852 122332211110 1100 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
.+.++ +. +.+++. ++++..++|+++..+... +.+++|++ +.+|++|.|+
T Consensus 57 --~i~~~-----------------~~----~~~~~~-gv~~i~~~v~~Id~~~~~-----V~~~~g~~--i~YD~LViAt 105 (430)
T 3hyw_A 57 --DISVP-----------------LA----PLLPKF-NIEFINEKAESIDPDANT-----VTTQSGKK--IEYDYLVIAT 105 (430)
T ss_dssp --GSEEE-----------------ST----TTGGGG-TEEEECSCEEEEETTTTE-----EEETTCCE--EECSEEEECC
T ss_pred --Hhhhc-----------------HH----HHHHHC-CcEEEEeEEEEEECCCCE-----EEECCCCE--EECCEEEEeC
Confidence 00001 00 111223 799999999999876664 33577875 5599999999
Q ss_pred CCcc
Q 009994 214 GCFS 217 (520)
Q Consensus 214 G~~S 217 (520)
|...
T Consensus 106 G~~~ 109 (430)
T 3hyw_A 106 GPKL 109 (430)
T ss_dssp CCEE
T ss_pred CCCc
Confidence 9753
No 162
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.22 E-value=2.8e-06 Score=90.64 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=68.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
.||+|||||++|+++|..|++. |.+|+|+|+.+... +.+.++.. .+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l~~--------~~~~--------------- 51 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGLPY--------HISG--------------- 51 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGHHH--------HHTS---------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCchH--------HhcC---------------
Confidence 3899999999999999999998 89999999986432 11111111 0000
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTI 210 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV 210 (520)
.. . ........ ..+.+.+ +. +++++.++ |+++..+... +++.+ .+|+..++.+|.+|
T Consensus 52 ~~-----~------~~~~~~~~---~~~~~~~---~~-~i~~~~~~~V~~id~~~~~---v~~~~~~~g~~~~~~~d~lv 110 (565)
T 3ntd_A 52 EI-----A------QRSALVLQ---TPESFKA---RF-NVEVRVKHEVVAIDRAAKL---VTVRRLLDGSEYQESYDTLL 110 (565)
T ss_dssp SS-----C------CGGGGBCC---CHHHHHH---HH-CCEEETTEEEEEEETTTTE---EEEEETTTCCEEEEECSEEE
T ss_pred Cc-----C------ChHHhhcc---CHHHHHH---hc-CcEEEECCEEEEEECCCCE---EEEEecCCCCeEEEECCEEE
Confidence 00 0 00000000 1122222 12 78888776 9888776664 44544 44665567899999
Q ss_pred EecCCcc
Q 009994 211 VCDGCFS 217 (520)
Q Consensus 211 ~AdG~~S 217 (520)
.|+|...
T Consensus 111 iAtG~~p 117 (565)
T 3ntd_A 111 LSPGAAP 117 (565)
T ss_dssp ECCCEEE
T ss_pred ECCCCCC
Confidence 9999743
No 163
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.22 E-value=1.1e-06 Score=89.88 Aligned_cols=34 Identities=32% Similarity=0.535 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCe--EEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRR--VHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~--V~v~Er~~~ 88 (520)
.+|+|||||++|+++|..|+++|.+ |+|+|+.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~ 38 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC
Confidence 4899999999999999999999987 999999864
No 164
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.21 E-value=2.6e-06 Score=91.52 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
...+||+||||||+|+++|..|++.|.+|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999984
No 165
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.18 E-value=1.1e-05 Score=83.46 Aligned_cols=99 Identities=21% Similarity=0.255 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+... +. .
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l---------~~---------~---------------------- 206 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL---------PT---------M---------------------- 206 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC---------TT---------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc---------cc---------c----------------------
Confidence 3579999999999999999999999999999985210 00 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.|.+.+++. |++++.++ |+++..+++. +.+...+|++ +.+|.||.|
T Consensus 207 ---------------------~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~~D~vv~A 259 (455)
T 2yqu_A 207 ---------------------DLEVSRAAERVFKKQ-GLTIRTGVRVTAVVPEAKG---ARVELEGGEV--LEADRVLVA 259 (455)
T ss_dssp ---------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEEEETTSCE--EEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEEEECCCeE--EEcCEEEEC
Confidence 012344455555555 89999987 9999877764 4455566764 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
+|..++.
T Consensus 260 ~G~~p~~ 266 (455)
T 2yqu_A 260 VGRRPYT 266 (455)
T ss_dssp SCEEECC
T ss_pred cCCCcCC
Confidence 9988765
No 166
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.17 E-value=7.1e-06 Score=87.01 Aligned_cols=58 Identities=17% Similarity=0.180 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCC-CcEEEEecC-eEEEecCCc
Q 009994 159 IQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTKD-GQELRAYAP-LTIVCDGCF 216 (520)
Q Consensus 159 ~~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~gv~v~~~~-g~~~~~~ad-~vV~AdG~~ 216 (520)
...+.+.+.+.+|++++.++ |+++..++ ++++||++...+ |+..+++|+ .||.|.|+.
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 34444444445699999998 99999877 788999987532 777788998 999999984
No 167
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.17 E-value=1.8e-05 Score=77.58 Aligned_cols=100 Identities=20% Similarity=0.235 Sum_probs=75.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~-----------~---------------------- 183 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---------A-----------E---------------------- 183 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---------C-----------C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---------c-----------C----------------------
Confidence 479999999999999999999999999999874210 0 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-C-CcEEEEecCeEEE
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-D-GQELRAYAPLTIV 211 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~-g~~~~~~ad~vV~ 211 (520)
..+.+.+.+.+++. +++++.++ ++++..+++++.+|++.+. + |+..++.+|.||.
T Consensus 184 ---------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~ 241 (320)
T 1trb_A 184 ---------------------KILIKRLMDKVENG-NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFV 241 (320)
T ss_dssp ---------------------HHHHHHHHHHHHTS-SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEE
T ss_pred ---------------------HHHHHHHHHhcccC-CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEE
Confidence 11344455566665 89999886 9999877767777777652 2 5445678999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|.|....
T Consensus 242 a~G~~p~ 248 (320)
T 1trb_A 242 AIGHSPN 248 (320)
T ss_dssp CSCEEES
T ss_pred EeCCCCC
Confidence 9997643
No 168
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=5.3e-06 Score=86.11 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.++||+|||||++|+++|..|++.|.+|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999994
No 169
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.15 E-value=2.6e-06 Score=89.94 Aligned_cols=36 Identities=28% Similarity=0.332 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..++||+|||||++|+++|..|++.|.+|+|+|++.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~ 76 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 76 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456899999999999999999999999999999985
No 170
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.14 E-value=9e-07 Score=93.08 Aligned_cols=38 Identities=29% Similarity=0.520 Sum_probs=34.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh-CCCeEEEEccCCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGK-DGRRVHVIERDVTEP 90 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~Er~~~~~ 90 (520)
.++||+|||||++||++|+.|++ .|++|+|+|++....
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~G 47 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPG 47 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCc
Confidence 35899999999999999999998 599999999987554
No 171
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.14 E-value=4.7e-06 Score=85.11 Aligned_cols=36 Identities=22% Similarity=0.454 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~~ 88 (520)
.++||+|||||++|+++|..|++.|. +|+|+|+...
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~ 43 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAE 43 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCC
Confidence 45899999999999999999999998 4999999853
No 172
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.14 E-value=4e-06 Score=87.87 Aligned_cols=111 Identities=17% Similarity=0.215 Sum_probs=69.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
++||+|||||++|+++|..|++. .+|+|+|+.+... | .+... ... .
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G----G-~~~~~------------------~~~-----~----- 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG----G-DMWLK------------------GIK-----Q----- 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS----C-SGGGT------------------CSE-----E-----
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC----C-eeecc------------------ccc-----c-----
Confidence 47999999999999999999999 9999999985321 1 00000 000 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..++ + ...++...+.+.+ + .+++++.++ |+++..++..+. +. ...+++..++.+|.+|.|
T Consensus 154 ---~g~~---------~---~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~~~~~~-~~-~~~~~~~~~~~~d~lvlA 214 (493)
T 1y56_A 154 ---EGFN---------K---DSRKVVEELVGKL-N-ENTKIYLETSALGVFDKGEYFL-VP-VVRGDKLIEILAKRVVLA 214 (493)
T ss_dssp ---TTTT---------E---EHHHHHHHHHHTC-C-TTEEEETTEEECCCEECSSSEE-EE-EEETTEEEEEEESCEEEC
T ss_pred ---CCCC---------C---CHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcCCcEEE-EE-EecCCeEEEEECCEEEEC
Confidence 0000 0 1123444444444 3 489988876 888776665432 11 123455456789999999
Q ss_pred cCCcc
Q 009994 213 DGCFS 217 (520)
Q Consensus 213 dG~~S 217 (520)
+|...
T Consensus 215 tGa~~ 219 (493)
T 1y56_A 215 TGAID 219 (493)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99754
No 173
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.13 E-value=1.9e-05 Score=78.85 Aligned_cols=99 Identities=23% Similarity=0.286 Sum_probs=74.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|.+|+-+|..|++.|.+|+++++.+... +.
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~---------~~--------------------------------- 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ---------GH--------------------------------- 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS---------SC---------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC---------CC---------------------------------
Confidence 479999999999999999999999999999975210 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..+.+.|.+..++. +++++.++ ++++..+++++.+|++...+|+..++.+|.||.|.
T Consensus 202 ---------------------~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 202 ---------------------GKTAHEVERARANG-TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp ---------------------SHHHHSSHHHHHHT-SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECC
T ss_pred ---------------------HHHHHHHHHHhhcC-ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECC
Confidence 00112233334444 89999996 99998887877777776567766678899999999
Q ss_pred CCcc
Q 009994 214 GCFS 217 (520)
Q Consensus 214 G~~S 217 (520)
|...
T Consensus 260 G~~p 263 (360)
T 3ab1_A 260 GFKS 263 (360)
T ss_dssp CBCC
T ss_pred CCCC
Confidence 9654
No 174
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.12 E-value=3.2e-06 Score=88.60 Aligned_cols=32 Identities=28% Similarity=0.561 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-CCCeEEEEcc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~Er 85 (520)
++||+|||||++|+++|..|++ .|.+|+|+|+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.11 E-value=1.2e-05 Score=81.76 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=65.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
+|+|||||+||+++|..|++.| .+|+|||+++. ...++....++. |..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~-------~~~~p~~~~v~~--g~~--------------------- 53 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET-------YYTCYMSNEVIG--GDR--------------------- 53 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS-------EECSTTHHHHHH--TSS---------------------
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC-------CCCccCHHHHhc--CCC---------------------
Confidence 6999999999999999998866 68999998752 112221111110 100
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
+..+ .... +. .+.+. ++++..++|+++..+... +...+|++ +.+|++|.|+
T Consensus 54 ------~~~~-------~~~~---~~-----~~~~~-gv~~i~~~v~~id~~~~~-----v~~~~g~~--i~yd~LviAt 104 (401)
T 3vrd_B 54 ------ELAS-------LRVG---YD-----GLRAH-GIQVVHDSALGIDPDKKL-----VKTAGGAE--FAYDRCVVAP 104 (401)
T ss_dssp ------CGGG-------GEEC---SH-----HHHHT-TCEEECSCEEEEETTTTE-----EEETTSCE--EECSEEEECC
T ss_pred ------CHHH-------HhhC---HH-----HHHHC-CCEEEEeEEEEEEccCcE-----EEecccce--eecceeeecc
Confidence 0000 0000 11 11223 799999999998776653 23567765 5599999999
Q ss_pred CCcch
Q 009994 214 GCFSN 218 (520)
Q Consensus 214 G~~S~ 218 (520)
|....
T Consensus 105 G~~~~ 109 (401)
T 3vrd_B 105 GIDLL 109 (401)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 97643
No 176
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.10 E-value=2e-05 Score=81.47 Aligned_cols=100 Identities=24% Similarity=0.357 Sum_probs=72.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+....+ .
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------~------------------------ 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV---------------Y------------------------ 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT---------------T------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc---------------c------------------------
Confidence 4578999999999999999999999999999998521100 0
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
+ ...+.+.+.+.+++. |++++.++ |+++..+ +++..+. . +|+ ++.+|.||.
T Consensus 189 ------~---------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~v~~v~--~-~~~--~i~~d~vi~ 240 (447)
T 1nhp_A 189 ------L---------------DKEFTDVLTEEMEAN-NITIATGETVERYEGD-GRVQKVV--T-DKN--AYDADLVVV 240 (447)
T ss_dssp ------C---------------CHHHHHHHHHHHHTT-TEEEEESCCEEEEECS-SBCCEEE--E-SSC--EEECSEEEE
T ss_pred ------C---------------CHHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc-CcEEEEE--E-CCC--EEECCEEEE
Confidence 0 023556667777776 89999987 8888765 4433333 3 344 366999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|+|..++.
T Consensus 241 a~G~~p~~ 248 (447)
T 1nhp_A 241 AVGVRPNT 248 (447)
T ss_dssp CSCEEESC
T ss_pred CcCCCCCh
Confidence 99987653
No 177
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.10 E-value=3e-05 Score=75.58 Aligned_cols=96 Identities=21% Similarity=0.264 Sum_probs=72.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|++|+-+|..|++.|.+|+++++.+... ..
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------~~---------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--------------------AD---------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------cc----------------------
Confidence 479999999999999999999999999999875210 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~A 212 (520)
+.+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|+..++.+|.||.|
T Consensus 183 -------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 237 (310)
T 1fl2_A 183 -------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQ 237 (310)
T ss_dssp -------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEe
Confidence 0122333443489999987 999987767776787776 4576667889999999
Q ss_pred cCCcc
Q 009994 213 DGCFS 217 (520)
Q Consensus 213 dG~~S 217 (520)
.|...
T Consensus 238 ~G~~p 242 (310)
T 1fl2_A 238 IGLLP 242 (310)
T ss_dssp SCEEE
T ss_pred eCCcc
Confidence 99654
No 178
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=4.3e-06 Score=84.13 Aligned_cols=34 Identities=35% Similarity=0.553 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..||+|||||++|+++|..|++.| +|+|+|+...
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 469999999999999999999999 9999999853
No 179
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.07 E-value=6.9e-06 Score=84.66 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC--CeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~ 87 (520)
++|+|||||+||+++|..|++.| .+|+|+|+++
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~ 35 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDR 35 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 36999999999999999999988 5799999975
No 180
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.06 E-value=1.6e-05 Score=89.82 Aligned_cols=34 Identities=41% Similarity=0.659 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+||||||||+++|..|++.|++|+|+|+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~ 161 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERA 161 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5799999999999999999999999999999975
No 181
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.06 E-value=5.4e-06 Score=87.03 Aligned_cols=62 Identities=29% Similarity=0.404 Sum_probs=47.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCcee-----e-------eee---ccchHHHHHhcCchhH
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----G-------ELL---QPGGYLKLVELGLEDC 114 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~-----g-------~~l---~~~~~~~l~~lGl~~~ 114 (520)
..+||+|||||++||++|+.|+++|++|+|+|++.....+.. | ..+ ++...+.++++|+.+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~ 88 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLREK 88 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCccc
Confidence 458999999999999999999999999999999875433211 1 112 2445678899998754
No 182
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.06 E-value=3.5e-06 Score=87.32 Aligned_cols=56 Identities=21% Similarity=0.218 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEeCCCcEEEEecCeEEEecCCcch
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~--~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~ 218 (520)
.+.+.|.+.+++. |++++.++ |+++..+ ++++.+|+. +|+ +++||.||.|.|.++.
T Consensus 243 ~l~~al~~~~~~~-G~~i~~~~~V~~i~~~~~~~~~~~V~~---~g~--~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIY-GGTYMLDTPIDEVLYKKDTGKFEGVKT---KLG--TFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCCCEEEEETTTTEEEEEEE---TTE--EEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEECCCCeEEEEEE---CCe--EEECCEEEECCCccch
Confidence 5777788888877 67888887 9999887 777666553 454 3669999999999864
No 183
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=3.1e-05 Score=80.20 Aligned_cols=102 Identities=18% Similarity=0.326 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..- + ++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~---------~~---------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL---------S---------GF---------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------T---------TS----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------c---------cc----------------------
Confidence 3589999999999999999999999999999975210 0 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ |+++..+++.+. +++.. +|+..++.+|.||.|
T Consensus 210 ---------------------~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~~-~g~~~~~~~D~vv~a 265 (455)
T 1ebd_A 210 ---------------------EKQMAAIIKKRLKKK-GVEVVTNALAKGAEEREDGVT-VTYEA-NGETKTIDADYVLVT 265 (455)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEEE-EEEEE-TTEEEEEEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCeEE-EEEEe-CCceeEEEcCEEEEC
Confidence 012444555666666 89999987 999987766532 44432 333345779999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
+|.....
T Consensus 266 ~G~~p~~ 272 (455)
T 1ebd_A 266 VGRRPNT 272 (455)
T ss_dssp SCEEESC
T ss_pred cCCCccc
Confidence 9987654
No 184
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.05 E-value=6.8e-05 Score=73.04 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------~~---------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-------CA---------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-------SC----------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-------CC----------------------------------
Confidence 3579999999999999999999999999999874210 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~ 211 (520)
..+.+.+.+..+++++.++ ++++..+++++.+|++.. .+|++.++.+|.||.
T Consensus 182 --------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 235 (311)
T 2q0l_A 182 --------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFI 235 (311)
T ss_dssp --------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEE
Confidence 0012223333489999887 889887767766677764 367666788999999
Q ss_pred ecCCcc
Q 009994 212 CDGCFS 217 (520)
Q Consensus 212 AdG~~S 217 (520)
|.|...
T Consensus 236 a~G~~p 241 (311)
T 2q0l_A 236 FVGYDV 241 (311)
T ss_dssp CSCEEE
T ss_pred EecCcc
Confidence 999654
No 185
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.05 E-value=4e-05 Score=75.50 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++++......
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 35799999999999999999999999999999752110
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~ 211 (520)
.+.+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|+..++.+|.||.
T Consensus 211 -------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~ 265 (338)
T 3itj_A 211 -------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFY 265 (338)
T ss_dssp -------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEE
T ss_pred -------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEE
Confidence 00122233333489999887 999988877777788776 345556788999999
Q ss_pred ecCCcc
Q 009994 212 CDGCFS 217 (520)
Q Consensus 212 AdG~~S 217 (520)
|.|...
T Consensus 266 a~G~~p 271 (338)
T 3itj_A 266 AIGHTP 271 (338)
T ss_dssp CSCEEE
T ss_pred EeCCCC
Confidence 999653
No 186
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.04 E-value=2.6e-05 Score=83.41 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=44.2
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEeeC----CeEEEEEEEeCCCcEEEEec-CeEEEecCCcch
Q 009994 161 RMREKAASLPNVRLEQGT-VTSLLEEN----GTIKGVQYKTKDGQELRAYA-PLTIVCDGCFSN 218 (520)
Q Consensus 161 ~L~~~~~~~~~v~i~~~~-v~~~~~~~----~~v~gv~v~~~~g~~~~~~a-d~vV~AdG~~S~ 218 (520)
.+...+.+.+|++++.++ |+++..++ ++++||++.+.+|+..+++| +-||.|.|+...
T Consensus 235 ~~l~~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 235 AWLLPNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp HHTTTTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCC
Confidence 333333445699999997 99988653 47899998866788778889 899999998754
No 187
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.04 E-value=3.7e-06 Score=86.99 Aligned_cols=38 Identities=45% Similarity=0.462 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~ 90 (520)
.++||+|||||++||++|+.|++.|++|+|+|++....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCC
Confidence 35799999999999999999999999999999986543
No 188
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.03 E-value=1.3e-05 Score=84.15 Aligned_cols=36 Identities=17% Similarity=0.352 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+.+.+|||||||++|+++|..|++.+++|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999984
No 189
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.03 E-value=1.8e-05 Score=83.87 Aligned_cols=57 Identities=21% Similarity=0.329 Sum_probs=43.1
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEee----C-CeEEEEEEEeCCC-cEEEEec-CeEEEecCCcc
Q 009994 161 RMREKAASLPNVRLEQGT-VTSLLEE----N-GTIKGVQYKTKDG-QELRAYA-PLTIVCDGCFS 217 (520)
Q Consensus 161 ~L~~~~~~~~~v~i~~~~-v~~~~~~----~-~~v~gv~v~~~~g-~~~~~~a-d~vV~AdG~~S 217 (520)
.....+.+.+|++++.++ |+++..+ + ++++||++...+| +..+++| +-||.|.|+..
T Consensus 212 ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 212 AYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHH
T ss_pred HHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcC
Confidence 333444456799999997 9999876 3 5788999987666 6677888 78999999763
No 190
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.02 E-value=6.4e-06 Score=83.36 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--CeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999999 5699999874
No 191
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.02 E-value=1.9e-05 Score=81.66 Aligned_cols=100 Identities=18% Similarity=0.243 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+... + .+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~---------~~~--------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL---------P---------SFD--------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------T---------TSC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh---------h---------hhh---------------------
Confidence 3579999999999999999999999999999975210 0 000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ |+++..++++. +.+...+|++ +.+|.||.|
T Consensus 208 ----------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~--i~~D~vv~a 260 (450)
T 1ges_A 208 ----------------------PMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGS--LTLELEDGRS--ETVDCLIWA 260 (450)
T ss_dssp ----------------------HHHHHHHHHHHHHH-SCEEECSCCEEEEEECTTSC--EEEEETTSCE--EEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCcE--EEEEECCCcE--EEcCEEEEC
Confidence 01334445555555 89999987 99998765431 3445667763 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
+|..+..
T Consensus 261 ~G~~p~~ 267 (450)
T 1ges_A 261 IGREPAN 267 (450)
T ss_dssp SCEEESC
T ss_pred CCCCcCC
Confidence 9988765
No 192
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.01 E-value=3.7e-05 Score=79.88 Aligned_cols=103 Identities=17% Similarity=0.272 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.. + +. +
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~--------l-~~---------~---------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC--------A-PT---------L---------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS--------S-TT---------S----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc--------c-cc---------C----------------------
Confidence 357999999999999999999999999999998521 0 00 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHH-HcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKA-ASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
...+.+.+.+.+ ++. |++++.++ |+++..+++.+ .+++...+|+..++.+|.||.
T Consensus 214 ---------------------d~~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~ 270 (468)
T 2qae_A 214 ---------------------DEDVTNALVGALAKNE-KMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLV 270 (468)
T ss_dssp ---------------------CHHHHHHHHHHHHHHT-CCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEE
T ss_pred ---------------------CHHHHHHHHHHHhhcC-CcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEE
Confidence 012344555666 555 89999986 99988766543 244433356445678999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|.|..++.
T Consensus 271 a~G~~p~~ 278 (468)
T 2qae_A 271 SVGRRPFT 278 (468)
T ss_dssp CSCEEECC
T ss_pred CCCcccCC
Confidence 99988754
No 193
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.00 E-value=2.6e-05 Score=80.92 Aligned_cols=99 Identities=20% Similarity=0.186 Sum_probs=73.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+... . . +.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l--------~--------~--~~---------------------- 206 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL--------F--------Q--FD---------------------- 206 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------T--------T--SC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc--------c--------c--cC----------------------
Confidence 479999999999999999999999999999974210 0 0 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..+.+.+.+.+++. |++++.++ |+++..++++ +.+...+|+. ++.+|.||.|+
T Consensus 207 ---------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~G~~-~i~~D~vv~a~ 260 (463)
T 2r9z_A 207 ---------------------PLLSATLAENMHAQ-GIETHLEFAVAALERDAQG---TTLVAQDGTR-LEGFDSVIWAV 260 (463)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TCEEESSCCEEEEEEETTE---EEEEETTCCE-EEEESEEEECS
T ss_pred ---------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCe---EEEEEeCCcE-EEEcCEEEECC
Confidence 01233445555555 89999997 9999877664 4555677873 46799999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|..+..
T Consensus 261 G~~p~~ 266 (463)
T 2r9z_A 261 GRAPNT 266 (463)
T ss_dssp CEEESC
T ss_pred CCCcCC
Confidence 987754
No 194
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.00 E-value=5e-05 Score=79.11 Aligned_cols=105 Identities=16% Similarity=0.268 Sum_probs=73.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..-. . +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------~---------~~--------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------S---------MD--------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------S---------SC---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------c---------cC---------------------
Confidence 35799999999999999999999999999999852100 0 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEecCeEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT-KDGQELRAYAPLTI 210 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~gv~v~~-~~g~~~~~~ad~vV 210 (520)
..+.+.+.+.+++. |++++.++ |+++..+ +++...+++.. .+|+..++.+|.||
T Consensus 224 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv 280 (478)
T 1v59_A 224 ----------------------GEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 280 (478)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEE
Confidence 12445556666666 89999997 8888762 33333354442 23433457799999
Q ss_pred EecCCcchhh
Q 009994 211 VCDGCFSNLR 220 (520)
Q Consensus 211 ~AdG~~S~vR 220 (520)
.|.|...+..
T Consensus 281 ~a~G~~p~~~ 290 (478)
T 1v59_A 281 VAVGRRPYIA 290 (478)
T ss_dssp ECSCEEECCT
T ss_pred ECCCCCcCCC
Confidence 9999877653
No 195
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.98 E-value=6.8e-06 Score=84.20 Aligned_cols=37 Identities=30% Similarity=0.443 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEccCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTE 89 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~~~ 89 (520)
+++||+|||||++||++|+.|+++| .+|+|+|++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4579999999999999999999999 999999998654
No 196
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.97 E-value=7.3e-05 Score=72.76 Aligned_cols=96 Identities=18% Similarity=0.189 Sum_probs=73.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... ..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---------~~--------------------------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR---------AA--------------------------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---------SC---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---------CC---------------------------------
Confidence 579999999999999999999999999999875210 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..+.+ +..++. +++++.++ +.++..+++++.+|++...+|+..++.+|.||.|.
T Consensus 186 ---------------------~~~~~---~~~~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 186 ---------------------PSTVE---KVKKNE-KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ---------------------HHHHH---HHHHCT-TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred ---------------------HHHHH---HHHhcC-CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 00111 112333 89999886 99998888888888887668877778899999999
Q ss_pred CCcc
Q 009994 214 GCFS 217 (520)
Q Consensus 214 G~~S 217 (520)
|...
T Consensus 241 G~~p 244 (315)
T 3r9u_A 241 GLNV 244 (315)
T ss_dssp CEEE
T ss_pred cCCC
Confidence 9643
No 197
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.97 E-value=6e-05 Score=76.70 Aligned_cols=99 Identities=24% Similarity=0.384 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~------------------------------------------ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR------------------------------------------ 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh------------------------------------------
Confidence 47999999999999999999999999999997521000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
.....+.+.+.+.+++. |++++.++ |+++..+++++.+| ...+|++ +.||.||.|.
T Consensus 181 ------------------~~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~V--~~~dG~~--i~aD~Vv~a~ 237 (404)
T 3fg2_P 181 ------------------VVTPEISSYFHDRHSGA-GIRMHYGVRATEIAAEGDRVTGV--VLSDGNT--LPCDLVVVGV 237 (404)
T ss_dssp ------------------TSCHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEE--EETTSCE--EECSEEEECC
T ss_pred ------------------ccCHHHHHHHHHHHHhC-CcEEEECCEEEEEEecCCcEEEE--EeCCCCE--EEcCEEEECc
Confidence 00123455666666666 89999986 99998887776544 4567774 5699999999
Q ss_pred CCcch
Q 009994 214 GCFSN 218 (520)
Q Consensus 214 G~~S~ 218 (520)
|....
T Consensus 238 G~~p~ 242 (404)
T 3fg2_P 238 GVIPN 242 (404)
T ss_dssp CEEEC
T ss_pred CCccC
Confidence 98764
No 198
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.97 E-value=5.9e-05 Score=77.01 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=75.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------------------------------------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------------------------------------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----------------------------------------
Confidence 457999999999999999999999999999998532000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
.....+.+.+.+.+++. |++++.++ |+++..+++++.+|+ ..+|++ +.||.||.|
T Consensus 191 -------------------~~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~v~--l~dG~~--i~aD~Vv~a 246 (415)
T 3lxd_A 191 -------------------VAGEALSEFYQAEHRAH-GVDLRTGAAMDCIEGDGTKVTGVR--MQDGSV--IPADIVIVG 246 (415)
T ss_dssp -------------------TSCHHHHHHHHHHHHHT-TCEEEETCCEEEEEESSSBEEEEE--ESSSCE--EECSEEEEC
T ss_pred -------------------hcCHHHHHHHHHHHHhC-CCEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEEC
Confidence 00123455566666666 89999887 999988777665554 567764 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|.....
T Consensus 247 ~G~~p~~ 253 (415)
T 3lxd_A 247 IGIVPCV 253 (415)
T ss_dssp SCCEESC
T ss_pred CCCccCh
Confidence 9987653
No 199
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.96 E-value=6.7e-06 Score=82.54 Aligned_cols=35 Identities=37% Similarity=0.753 Sum_probs=33.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
...+||+|||||++||++|+.|+++|++|+|+|++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 45689999999999999999999999999999998
No 200
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.95 E-value=5.8e-05 Score=73.95 Aligned_cols=96 Identities=21% Similarity=0.315 Sum_probs=71.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+... . .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~---------~-----------~---------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM---------C-----------E---------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC---------S-----------C----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC---------C-----------C----------------------
Confidence 479999999999999999999999999999874210 0 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~A 212 (520)
..+. +.+.+. +++++.++ ++++..+++++.+|.+.. .+|+..++.+|.||.|
T Consensus 194 ---------------------~~l~----~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 247 (319)
T 3cty_A 194 ---------------------NAYV----QEIKKR-NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIY 247 (319)
T ss_dssp ---------------------HHHH----HHHHHT-TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEEC
T ss_pred ---------------------HHHH----HHHhcC-CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEe
Confidence 0112 222233 89999887 889887766566777765 4676667889999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
.|...+
T Consensus 248 ~G~~p~ 253 (319)
T 3cty_A 248 VGLIPQ 253 (319)
T ss_dssp CCEEEC
T ss_pred eCCccC
Confidence 996543
No 201
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.94 E-value=7e-05 Score=78.31 Aligned_cols=103 Identities=22% Similarity=0.391 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+... . .+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------~----------~~---------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL--------G----------GM---------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------S----------SS----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc--------c----------cC----------------------
Confidence 3579999999999999999999999999999875210 0 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCC-CcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKD-GQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~-g~~~~~~ad~vV~ 211 (520)
...+.+.+.+.+++. |++++.++ ++++..+++.+. +.+.+.+ |+..++.+|.||.
T Consensus 238 ---------------------d~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~~~~~-v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 238 ---------------------DGEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSGDGAK-VTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEEE-EEEEETTSCCCEEEEESEEEE
T ss_pred ---------------------CHHHHHHHHHHHHhC-CCEEEECCeEEEEEEeCCEEE-EEEEecCCCceEEEEcCEEEE
Confidence 012444555666665 89999987 999988777543 5555433 5445678999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|.|.....
T Consensus 295 a~G~~p~~ 302 (491)
T 3urh_A 295 ATGRKPST 302 (491)
T ss_dssp CCCCEECC
T ss_pred eeCCccCC
Confidence 99987654
No 202
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.93 E-value=9.7e-06 Score=84.75 Aligned_cols=38 Identities=32% Similarity=0.495 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
.+++||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 34679999999999999999999999999999998654
No 203
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.92 E-value=7.3e-05 Score=78.82 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++|+.+... +. +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l---------~~---------~----------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK---------LI---------K----------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------TC---------C-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc---------cc---------c-----------------------
Confidence 689999999999999999999999999999985210 00 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.|.+.+++. |++++.++ |+++..++ +++.++.+...+|+ .++.||.||.|
T Consensus 254 --------------------~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~Vv~A 311 (523)
T 1mo9_A 254 --------------------DNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDFVFLG 311 (523)
T ss_dssp --------------------SHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSCEEEC
T ss_pred --------------------cHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCEEEEC
Confidence 012445566666666 89999986 99988654 44544666777775 35779999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|..++.
T Consensus 312 ~G~~p~~ 318 (523)
T 1mo9_A 312 LGEQPRS 318 (523)
T ss_dssp CCCEECC
T ss_pred cCCccCC
Confidence 9988765
No 204
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.90 E-value=9.1e-06 Score=82.22 Aligned_cols=37 Identities=41% Similarity=0.663 Sum_probs=34.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
...+||+|||||++||++|+.|+++|.+|+|+|+++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~ 63 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPH 63 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCC
Confidence 4578999999999999999999999999999999764
No 205
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.90 E-value=9e-06 Score=82.75 Aligned_cols=36 Identities=31% Similarity=0.555 Sum_probs=33.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC-CCeEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~Er~~~ 88 (520)
.++||+|||||++||++|+.|++. |.+|+|+|+++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPH 42 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 468999999999999999999999 999999999864
No 206
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.90 E-value=8.7e-05 Score=77.62 Aligned_cols=102 Identities=22% Similarity=0.302 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... + .+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---------~---------~~d--------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA---------N---------LQD--------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT---------T---------CCC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc---------c---------cCC---------------------
Confidence 4579999999999999999999999999999985210 0 000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. ++++.++ ++++..+++.+. +++...+|+..++.+|.||.|
T Consensus 215 ----------------------~~~~~~l~~~l~~~--V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a 269 (492)
T 3ic9_A 215 ----------------------EEMKRYAEKTFNEE--FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAA 269 (492)
T ss_dssp ----------------------HHHHHHHHHHHHTT--SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHhhC--cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEe
Confidence 12444555555553 8898886 888887776543 444434776566889999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|.....
T Consensus 270 ~G~~p~~ 276 (492)
T 3ic9_A 270 TGRKANV 276 (492)
T ss_dssp SCCEESC
T ss_pred eCCccCC
Confidence 9987543
No 207
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.89 E-value=6.1e-06 Score=86.96 Aligned_cols=38 Identities=37% Similarity=0.524 Sum_probs=34.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEccCCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTEP 90 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~~~~ 90 (520)
..+||+|||||++||++|..|+++| .+|+|+|++....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 3579999999999999999999999 9999999987543
No 208
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=9.7e-05 Score=72.72 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=71.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+... . .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~---------~-----------~--------------------- 197 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR---------A-----------S--------------------- 197 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC---------S-----------C---------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC---------c-----------c---------------------
Confidence 3579999999999999999999999999999985210 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC--eEEEEEEEe-CCCcEEEEecCeE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG--TIKGVQYKT-KDGQELRAYAPLT 209 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~--~v~gv~v~~-~~g~~~~~~ad~v 209 (520)
+.+.+.+.+..+++++.++ ++++..+++ ++.+|.+.+ .+|+..++.+|.|
T Consensus 198 --------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~v 251 (333)
T 1vdc_A 198 --------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGL 251 (333)
T ss_dssp --------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred --------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEE
Confidence 0111222222489999886 888887664 666677765 3566567889999
Q ss_pred EEecCCcch
Q 009994 210 IVCDGCFSN 218 (520)
Q Consensus 210 V~AdG~~S~ 218 (520)
|.|.|....
T Consensus 252 i~a~G~~p~ 260 (333)
T 1vdc_A 252 FFAIGHEPA 260 (333)
T ss_dssp EECSCEEES
T ss_pred EEEeCCccc
Confidence 999997543
No 209
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.88 E-value=4e-05 Score=79.63 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..- +. +.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l---------~~---------~~--------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV---------PT---------MD--------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS---------TT---------SC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------cc---------cc---------------------
Confidence 3579999999999999999999999999999985210 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~vV~ 211 (520)
..+.+.+.+.+++. |++++.++ |+++..+++.+ .+++... +|+..++.+|.||.
T Consensus 218 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~D~vv~ 273 (470)
T 1dxl_A 218 ----------------------AEIRKQFQRSLEKQ-GMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGEQTIIEADVVLV 273 (470)
T ss_dssp ----------------------HHHHHHHHHHHHHS-SCCEECSEEEEEEECSSSSE-EEEEEESSSCCCEEEEESEEEC
T ss_pred ----------------------HHHHHHHHHHHHHc-CCEEEeCCEEEEEEEcCCeE-EEEEEecCCCcceEEECCEEEE
Confidence 12444555666665 89999987 88888765543 2444432 45434577999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|.|...+.
T Consensus 274 a~G~~p~~ 281 (470)
T 1dxl_A 274 SAGRTPFT 281 (470)
T ss_dssp CCCEEECC
T ss_pred CCCCCcCC
Confidence 99987654
No 210
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.88 E-value=9e-05 Score=76.75 Aligned_cols=143 Identities=15% Similarity=0.156 Sum_probs=81.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCCCCCce----eeeeeccchHHHHHhcCchhHHhhcccceeceEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRI----VGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYA 127 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~~~~~~----~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~ 127 (520)
..+|+|||||.+|+-+|..|++. |.+|++++|........ ......|...+.+..+.-.....-...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~------- 299 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLRE------- 299 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHH-------
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHH-------
Confidence 45799999999999999999998 99999999986421110 111222322333333221100000000
Q ss_pred EEECCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEe
Q 009994 128 LFKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAY 205 (520)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ 205 (520)
.....+.. .. ..+-...+.....+.+....+++++.++ |+++..+++.+. +++... +|+..++.
T Consensus 300 ------~~~~~~~~------~~-~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~-v~~~~~~~g~~~~~~ 365 (463)
T 3s5w_A 300 ------YHNTNYSV------VD-TDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIE-LALRDAGSGELSVET 365 (463)
T ss_dssp ------TGGGTSSC------BC-HHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEE-EEEEETTTCCEEEEE
T ss_pred ------hhccCCCc------CC-HHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEE-EEEEEcCCCCeEEEE
Confidence 00000000 00 0011112333344455554589999998 888888776543 555543 67777788
Q ss_pred cCeEEEecCCcc
Q 009994 206 APLTIVCDGCFS 217 (520)
Q Consensus 206 ad~vV~AdG~~S 217 (520)
+|.||.|+|...
T Consensus 366 ~D~Vv~AtG~~p 377 (463)
T 3s5w_A 366 YDAVILATGYER 377 (463)
T ss_dssp ESEEEECCCEEC
T ss_pred CCEEEEeeCCCC
Confidence 999999999654
No 211
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.87 E-value=0.00016 Score=70.85 Aligned_cols=96 Identities=22% Similarity=0.283 Sum_probs=70.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|..|+-+|..|++.|.+|+++++.+... ..
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---------~~--------------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR---------AN--------------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC---------SC---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC---------cc---------------------------------
Confidence 479999999999999999999999999999874210 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+..+++++.++ ++++..+ +++.+|.+.. .+|+..++.+|.||.|
T Consensus 191 -------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a 244 (325)
T 2q7v_A 191 -------------------------KVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIF 244 (325)
T ss_dssp -------------------------HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------hHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEc
Confidence 0012223333489999887 8888764 5566677765 4676667889999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
.|...+
T Consensus 245 ~G~~p~ 250 (325)
T 2q7v_A 245 IGHVPN 250 (325)
T ss_dssp SCEEES
T ss_pred cCCCCC
Confidence 996543
No 212
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.87 E-value=8.6e-05 Score=77.23 Aligned_cols=104 Identities=17% Similarity=0.231 Sum_probs=72.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+..-.+ .+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~~----------------------- 218 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-----------------GI----------------------- 218 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------------SC-----------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------------cc-----------------------
Confidence 57999999999999999999999999999998521100 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ |+++..+++....+++.. .+++..++.+|.||.|
T Consensus 219 --------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a 277 (474)
T 1zmd_A 219 --------------------DMEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVC 277 (474)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEEC
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEEC
Confidence 012444555666666 89999997 999887665412244432 1222235679999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|.....
T Consensus 278 ~G~~p~~ 284 (474)
T 1zmd_A 278 IGRRPFT 284 (474)
T ss_dssp SCEEECC
T ss_pred cCCCcCC
Confidence 9987654
No 213
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.87 E-value=3.3e-05 Score=80.09 Aligned_cols=99 Identities=24% Similarity=0.345 Sum_probs=70.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+... +. +.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~---------~~--------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL---------PT---------YD--------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS---------TT---------SC---------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc---------cc---------cC---------------------
Confidence 3579999999999999999999999999999985210 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ |+++.. ++ +.+...+|+..++.+|.||.|
T Consensus 212 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~--~~---v~v~~~~G~~~~i~~D~vv~a 263 (458)
T 1lvl_A 212 ----------------------SELTAPVAESLKKL-GIALHLGHSVEGYEN--GC---LLANDGKGGQLRLEADRVLVA 263 (458)
T ss_dssp ----------------------HHHHHHHHHHHHHH-TCEEETTCEEEEEET--TE---EEEECSSSCCCEECCSCEEEC
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEECCEEEEEEe--CC---EEEEECCCceEEEECCEEEEC
Confidence 12333444555554 89999986 888875 33 344444564345789999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
+|...+.
T Consensus 264 ~G~~p~~ 270 (458)
T 1lvl_A 264 VGRRPRT 270 (458)
T ss_dssp CCEEECC
T ss_pred cCCCcCC
Confidence 9987654
No 214
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.86 E-value=1.7e-05 Score=81.58 Aligned_cols=56 Identities=20% Similarity=0.241 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch
Q 009994 157 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 157 ~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~ 218 (520)
.+.+.|.+.+++. |++++.++ |+++..+++++.+|+ .+|+ +++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~v~~v~---~~g~--~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIY-GGTYMLNKPVDDIIMENGKVVGVK---SEGE--VARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHH-TCCCBCSCCCCEEEEETTEEEEEE---ETTE--EEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEeCCEEEEEE---ECCe--EEECCEEEECCCCCcc
Confidence 5777788877776 67888887 999998888776554 2565 3669999999999874
No 215
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.84 E-value=0.00014 Score=71.63 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=72.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+... +.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~---------~~-------------------------------- 190 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR---------AH-------------------------------- 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC---------SC--------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC---------cc--------------------------------
Confidence 3579999999999999999999999999999974210 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~vV~ 211 (520)
..+.+.|.+.+++. +++++.++ +.++..+ +++.+|++... +|+..++.+|.||.
T Consensus 191 ----------------------~~~~~~l~~~l~~~-gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2zbw_A 191 ----------------------EASVKELMKAHEEG-RLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLI 246 (335)
T ss_dssp ----------------------HHHHHHHHHHHHTT-SSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------HHHHHHHHhccccC-CeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEE
Confidence 01122344555555 89999996 8888774 55556766543 67655688999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|.|....
T Consensus 247 a~G~~p~ 253 (335)
T 2zbw_A 247 LAGYITK 253 (335)
T ss_dssp CCCEEEE
T ss_pred eecCCCC
Confidence 9997653
No 216
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=6.1e-05 Score=78.50 Aligned_cols=100 Identities=19% Similarity=0.221 Sum_probs=71.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.. + + .+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~--------l-~---------~~d---------------------- 225 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV--------L-R---------KFD---------------------- 225 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS--------C-T---------TSC----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc--------c-c---------ccC----------------------
Confidence 57999999999999999999999999999997521 0 0 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe-EEEEEEEeCCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGT-IKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~-v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ |+++..++++ + +.+...+|+ .++.+|.||.|
T Consensus 226 ---------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~~v~~~~G~-~~i~~D~vv~a 280 (479)
T 2hqm_A 226 ---------------------ECIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDK--LKIHMNDSK-SIDDVDELIWT 280 (479)
T ss_dssp ---------------------HHHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCC--EEEEETTSC-EEEEESEEEEC
T ss_pred ---------------------HHHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcE--EEEEECCCc-EEEEcCEEEEC
Confidence 11333444455554 89999997 9998865432 2 344556773 34679999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|...+.
T Consensus 281 ~G~~p~~ 287 (479)
T 2hqm_A 281 IGRKSHL 287 (479)
T ss_dssp SCEEECC
T ss_pred CCCCCcc
Confidence 9987765
No 217
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.81 E-value=0.00011 Score=75.93 Aligned_cols=99 Identities=23% Similarity=0.358 Sum_probs=72.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++|+.+....+ .+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~~----------------------- 189 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-----------------YF----------------------- 189 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------TS-----------------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------hh-----------------------
Confidence 47999999999999999999999999999997521000 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
...+.+.+.+.+++. |++++.++ |+++..+++++..+. . +|++ +.+|.||.|.
T Consensus 190 --------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~~v~--~-~g~~--i~~D~vv~a~ 243 (452)
T 2cdu_A 190 --------------------DKEFTDILAKDYEAH-GVNLVLGSKVAAFEEVDDEIITKT--L-DGKE--IKSDIAILCI 243 (452)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEESSCEEEEEEETTEEEEEE--T-TSCE--EEESEEEECC
T ss_pred --------------------hhhHHHHHHHHHHHC-CCEEEcCCeeEEEEcCCCeEEEEE--e-CCCE--EECCEEEECc
Confidence 012445556666666 89999987 999987666554333 3 5653 5699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|...+.
T Consensus 244 G~~p~~ 249 (452)
T 2cdu_A 244 GFRPNT 249 (452)
T ss_dssp CEEECC
T ss_pred CCCCCH
Confidence 987654
No 218
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.80 E-value=2.3e-05 Score=82.07 Aligned_cols=38 Identities=39% Similarity=0.618 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
....||+|||||++||++|..|++.|.+|+|+|++...
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 34689999999999999999999999999999998654
No 219
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=0.00027 Score=73.97 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.. + +. +.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~--------l-~~---------~d--------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRI--------L-RK---------FD--------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSS--------C-TT---------SC---------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCcc--------C-cc---------cc---------------------
Confidence 347999999999999999999999999999997521 0 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ |+++..++++. +.+...+|++ ++.+|.||.|
T Consensus 217 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~-~~~~D~vi~a 270 (500)
T 1onf_A 217 ----------------------ESVINVLENDMKKN-NINIVTFADVVEIKKVSDKN--LSIHLSDGRI-YEHFDHVIYC 270 (500)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTTC--EEEEETTSCE-EEEESEEEEC
T ss_pred ----------------------hhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCce--EEEEECCCcE-EEECCEEEEC
Confidence 12334455556665 89999987 99988754331 3455667775 3679999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|...+.
T Consensus 271 ~G~~p~~ 277 (500)
T 1onf_A 271 VGRSPDT 277 (500)
T ss_dssp CCBCCTT
T ss_pred CCCCcCC
Confidence 9987654
No 220
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.78 E-value=0.00013 Score=74.81 Aligned_cols=100 Identities=20% Similarity=0.245 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+..-.+ .+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------------~~---------------------- 189 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER-----------------VT---------------------- 189 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----------------TS----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------hh----------------------
Confidence 357999999999999999999999999999997421000 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEe--eCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLE--ENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~--~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
...+.+.+.+.+++. |++++.++ ++++.. +++++.+| ...+|++ +.+|.||
T Consensus 190 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~v--~~~~G~~--i~~D~Vv 243 (431)
T 1q1r_A 190 ---------------------APPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQQKVTAV--LCEDGTR--LPADLVI 243 (431)
T ss_dssp ---------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTTCCEEEE--EETTSCE--EECSEEE
T ss_pred ---------------------hHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCCCcEEEE--EeCCCCE--EEcCEEE
Confidence 012344455555555 89999997 999886 45555444 4567764 5699999
Q ss_pred EecCCcch
Q 009994 211 VCDGCFSN 218 (520)
Q Consensus 211 ~AdG~~S~ 218 (520)
.|.|....
T Consensus 244 ~a~G~~p~ 251 (431)
T 1q1r_A 244 AGIGLIPN 251 (431)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcC
Confidence 99997754
No 221
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.78 E-value=0.00025 Score=73.66 Aligned_cols=102 Identities=22% Similarity=0.283 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+... + .+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~---------~~---------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL---------P---------AV---------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------T---------TS----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC---------c---------cc----------------------
Confidence 3579999999999999999999999999999974210 0 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ ++++..+++.+. +.+.+.+| ..++.+|.||.|
T Consensus 220 ---------------------~~~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g-~~~~~~D~vi~a 275 (476)
T 3lad_A 220 ---------------------DEQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQVT-VKFVDAEG-EKSQAFDKLIVA 275 (476)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TEEEEETCEEEEEEECSSCEE-EEEESSSE-EEEEEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHhC-CCEEEECCEEEEEEEcCCEEE-EEEEeCCC-cEEEECCEEEEe
Confidence 012445555666665 89999886 899887766543 55554445 346789999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|.....
T Consensus 276 ~G~~p~~ 282 (476)
T 3lad_A 276 VGRRPVT 282 (476)
T ss_dssp SCEEECC
T ss_pred eCCcccC
Confidence 9977654
No 222
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.78 E-value=1.6e-05 Score=79.83 Aligned_cols=34 Identities=44% Similarity=0.572 Sum_probs=32.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
+||+|||||++|+++|..|++.|.+|+|+|++..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 6999999999999999999999999999999864
No 223
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.77 E-value=7.2e-05 Score=76.27 Aligned_cols=100 Identities=28% Similarity=0.361 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++|+.+... ++ .+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l---------~~---~~--------------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL---------VR---VL--------------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------HH---HH---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc---------hh---hc---------------------------
Confidence 3579999999999999999999999999999985211 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ |.++..++ ++. .+...+|++ +.||.||.|
T Consensus 184 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~-~~~--~v~~~dg~~--i~aD~Vv~a 236 (410)
T 3ef6_A 184 ---------------------GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEG-QLE--QVMASDGRS--FVADSALIC 236 (410)
T ss_dssp ---------------------CHHHHHHHHHHHHHH-TCEEECSCCEEEEECSS-SCC--EEEETTSCE--EECSEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEeccC-cEE--EEEECCCCE--EEcCEEEEe
Confidence 012344455555555 89999887 88887654 332 344677874 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|..+..
T Consensus 237 ~G~~p~~ 243 (410)
T 3ef6_A 237 VGAEPAD 243 (410)
T ss_dssp SCEEECC
T ss_pred eCCeecH
Confidence 9987653
No 224
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.75 E-value=0.00014 Score=76.05 Aligned_cols=100 Identities=14% Similarity=0.216 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC---CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEE
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~---G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
.-+|+|||||..|+-+|..|++. |.+|+|+|+.+.. + +. +
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~--------l-~~---------~------------------- 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI--------L-RG---------F------------------- 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS--------S-TT---------S-------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc--------c-cc---------c-------------------
Confidence 35799999999999999999999 9999999998521 0 00 0
Q ss_pred CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
...+.+.+.+.+++. |++++.++ |+++..++++. +.+...+|+ ++.+|.|
T Consensus 230 ------------------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~v 280 (490)
T 1fec_A 230 ------------------------DSELRKQLTEQLRAN-GINVRTHENPAKVTKNADGT--RHVVFESGA--EADYDVV 280 (490)
T ss_dssp ------------------------CHHHHHHHHHHHHHT-TEEEEETCCEEEEEECTTSC--EEEEETTSC--EEEESEE
T ss_pred ------------------------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCE--EEEEECCCc--EEEcCEE
Confidence 012445556666666 89999997 99998765432 344566776 4669999
Q ss_pred EEecCCcchh
Q 009994 210 IVCDGCFSNL 219 (520)
Q Consensus 210 V~AdG~~S~v 219 (520)
|.|.|...+.
T Consensus 281 v~a~G~~p~~ 290 (490)
T 1fec_A 281 MLAIGRVPRS 290 (490)
T ss_dssp EECSCEEESC
T ss_pred EEccCCCcCc
Confidence 9999987654
No 225
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.75 E-value=2.5e-05 Score=78.97 Aligned_cols=36 Identities=33% Similarity=0.681 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
++||+|||||++|+++|..|++.|.+|+|+|++...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 479999999999999999999999999999998643
No 226
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.74 E-value=1.1e-05 Score=84.54 Aligned_cols=34 Identities=32% Similarity=0.457 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+||||||+|+++|..|++.|.+|+|+||+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5899999999999999999999999999999963
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.74 E-value=0.0001 Score=76.39 Aligned_cols=102 Identities=25% Similarity=0.349 Sum_probs=71.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.. + +. +.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~--------l-~~---------~~--------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA--------L-PN---------ED--------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS--------S-TT---------SC---------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc--------c-cc---------cC---------------------
Confidence 357999999999999999999999999999998521 0 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ ++++..+++.+. +++. .+|+..++.+|.||.|
T Consensus 212 ----------------------~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-v~~~-~~g~~~~~~~D~vv~a 266 (464)
T 2a8x_A 212 ----------------------ADVSKEIEKQFKKL-GVTILTATKVESIADGGSQVT-VTVT-KDGVAQELKAEKVLQA 266 (464)
T ss_dssp ----------------------HHHHHHHHHHHHHH-TCEEECSCEEEEEEECSSCEE-EEEE-SSSCEEEEEESEEEEC
T ss_pred ----------------------HHHHHHHHHHHHHc-CCEEEeCcEEEEEEEcCCeEE-EEEE-cCCceEEEEcCEEEEC
Confidence 11333444555555 89999986 888887665432 3332 2565456789999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|...+.
T Consensus 267 ~G~~p~~ 273 (464)
T 2a8x_A 267 IGFAPNV 273 (464)
T ss_dssp SCEEECC
T ss_pred CCCCccC
Confidence 9987654
No 228
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.73 E-value=0.00016 Score=75.48 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+ .+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~~---------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-----------------YY---------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------TS----------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------------HH----------------------
Confidence 357999999999999999999999999999997521100 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ |+++.. ++++..+.. +|+ ++.+|.||.|
T Consensus 235 ---------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~-~~~v~~v~~---~g~--~i~~D~Vi~a 286 (490)
T 2bc0_A 235 ---------------------DRDLTDLMAKNMEEH-GIQLAFGETVKEVAG-NGKVEKIIT---DKN--EYDVDMVILA 286 (490)
T ss_dssp ---------------------CHHHHHHHHHHHHTT-TCEEEETCCEEEEEC-SSSCCEEEE---SSC--EEECSEEEEC
T ss_pred ---------------------HHHHHHHHHHHHHhC-CeEEEeCCEEEEEEc-CCcEEEEEE---CCc--EEECCEEEEC
Confidence 012445566666666 89999987 888876 444333432 455 3669999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|...+.
T Consensus 287 ~G~~p~~ 293 (490)
T 2bc0_A 287 VGFRPNT 293 (490)
T ss_dssp CCEEECC
T ss_pred CCCCcCh
Confidence 9977653
No 229
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.71 E-value=0.00029 Score=74.14 Aligned_cols=96 Identities=22% Similarity=0.284 Sum_probs=73.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|.+|+-+|..|++.|.+|+++|+.+... . +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~---------~------------~--------------------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---------A------------D--------------------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC---------S------------C---------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC---------c------------C---------------------
Confidence 479999999999999999999999999999874210 0 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~A 212 (520)
+.+.+.+.+.+|++++.++ ++++..+++++.++.+.+ .+|+..++.+|.||.|
T Consensus 394 -------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 448 (521)
T 1hyu_A 394 -------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQ 448 (521)
T ss_dssp -------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEEC
Confidence 1122334443589999987 888887777777788776 4677667889999999
Q ss_pred cCCcc
Q 009994 213 DGCFS 217 (520)
Q Consensus 213 dG~~S 217 (520)
.|...
T Consensus 449 ~G~~p 453 (521)
T 1hyu_A 449 IGLLP 453 (521)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99543
No 230
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.70 E-value=0.00019 Score=75.22 Aligned_cols=99 Identities=23% Similarity=0.302 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+..- +. +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l---------~~---------~---------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL---------PY---------E---------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS---------CC---------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---------cc---------c----------------------
Confidence 3579999999999999999999999999999985210 00 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
...+.+.+.+.+++. |++++.++ |+++..++++ +.+...+|++ +.+|.||.|
T Consensus 222 ---------------------d~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~aD~Vv~a 274 (499)
T 1xdi_A 222 ---------------------DADAALVLEESFAER-GVRLFKNARAASVTRTGAG---VLVTMTDGRT--VEGSHALMT 274 (499)
T ss_dssp ---------------------SHHHHHHHHHHHHHT-TCEEETTCCEEEEEECSSS---EEEEETTSCE--EEESEEEEC
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCE---EEEEECCCcE--EEcCEEEEC
Confidence 012445556666666 89999997 9999876654 4455667764 569999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|..++.
T Consensus 275 ~G~~p~~ 281 (499)
T 1xdi_A 275 IGSVPNT 281 (499)
T ss_dssp CCEEECC
T ss_pred CCCCcCC
Confidence 9988754
No 231
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.70 E-value=3.1e-05 Score=80.81 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=34.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~~~ 89 (520)
+..+||+|||||++||++|+.|+++| .+|+|+|+++..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34689999999999999999999999 799999998643
No 232
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.69 E-value=0.00034 Score=72.23 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+... +..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------~~~-------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL---------PKY-------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------TTT--------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc---------ccc--------------------------------
Confidence 479999999999999999999999999999975210 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
+ ...+.+.+.+.+++. |++++.++ |+++..+++++ .+..++| ++.+|.||.|.
T Consensus 187 ----~---------------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v---~v~~~~g---~i~aD~Vv~A~ 240 (452)
T 3oc4_A 187 ----F---------------DKEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGI---VLETSEQ---EISCDSGIFAL 240 (452)
T ss_dssp ----C---------------CHHHHHHHHHHHHTT-TEEEEETCCEEEEEECSSCE---EEEESSC---EEEESEEEECS
T ss_pred ----C---------------CHHHHHHHHHHHHHc-CCEEEeCCEEEEEEccCCeE---EEEECCC---EEEeCEEEECc
Confidence 0 013455666677766 89999987 99998766654 3445555 46799999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|.....
T Consensus 241 G~~p~~ 246 (452)
T 3oc4_A 241 NLHPQL 246 (452)
T ss_dssp CCBCCC
T ss_pred CCCCCh
Confidence 987543
No 233
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.69 E-value=0.00015 Score=75.68 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.. + +. +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~--------l-~~---------~~--------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGL--------M-QG---------AD--------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSS--------S-TT---------SC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc--------c-cc---------cC---------------------
Confidence 457999999999999999999999999999997521 0 00 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CC-CcEEEEecCeEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KD-GQELRAYAPLTI 210 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~-g~~~~~~ad~vV 210 (520)
..+.+.+.+.+++. |++++.++ |+++..+++.+ .|++.+ .+ |++ +.+|.||
T Consensus 226 ----------------------~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~--~~~D~vv 279 (482)
T 1ojt_A 226 ----------------------RDLVKVWQKQNEYR-FDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKEP--QRYDAVL 279 (482)
T ss_dssp ----------------------HHHHHHHHHHHGGG-EEEEECSCEEEEEEEETTEE-EEEEESSSCCSSC--EEESCEE
T ss_pred ----------------------HHHHHHHHHHHHhc-CCEEEECCEEEEEEEcCCeE-EEEEeccCCCceE--EEcCEEE
Confidence 12344556666665 89999986 99988776542 244432 11 543 4599999
Q ss_pred EecCCcchh
Q 009994 211 VCDGCFSNL 219 (520)
Q Consensus 211 ~AdG~~S~v 219 (520)
.|.|...+.
T Consensus 280 ~a~G~~p~~ 288 (482)
T 1ojt_A 280 VAAGRAPNG 288 (482)
T ss_dssp ECCCEEECG
T ss_pred ECcCCCcCC
Confidence 999987764
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.69 E-value=0.00017 Score=74.86 Aligned_cols=99 Identities=26% Similarity=0.318 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC-CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
.-+|+|||+|..|+-+|..|++. |.+|+++|+.+.... +.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~---------~~------------------------------ 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP---------GF------------------------------ 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST---------TT------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc---------cc------------------------------
Confidence 35799999999999999999999 999999999742100 00
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
....+.+.+.+.+++. |++++.++ |+++..+++++. +...+|++ +.+|.||.
T Consensus 200 ---------------------~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~---v~~~~g~~--i~aD~Vv~ 252 (472)
T 3iwa_A 200 ---------------------TSKSLSQMLRHDLEKN-DVVVHTGEKVVRLEGENGKVA---RVITDKRT--LDADLVIL 252 (472)
T ss_dssp ---------------------SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEE---EEEESSCE--EECSEEEE
T ss_pred ---------------------cCHHHHHHHHHHHHhc-CCEEEeCCEEEEEEccCCeEE---EEEeCCCE--EEcCEEEE
Confidence 0013555666666666 89999986 999987666543 44556764 56999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|.|....
T Consensus 253 a~G~~p~ 259 (472)
T 3iwa_A 253 AAGVSPN 259 (472)
T ss_dssp CSCEEEC
T ss_pred CCCCCcC
Confidence 9998754
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.67 E-value=0.00027 Score=71.93 Aligned_cols=95 Identities=27% Similarity=0.343 Sum_probs=69.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+++|+.+..-.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------------------------------------- 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------
Confidence 357999999999999999999999999999998521000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
.+ ...+.+.+.+.+++. |++++.++ ++++. ++ .| ...+|++ +.+|.||.|
T Consensus 184 ----~~---------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~--~~---~v--~~~~g~~--i~~D~vi~a 234 (408)
T 2gqw_A 184 ----AA---------------PATLADFVARYHAAQ-GVDLRFERSVTGSV--DG---VV--LLDDGTR--IAADMVVVG 234 (408)
T ss_dssp ----TS---------------CHHHHHHHHHHHHHT-TCEEEESCCEEEEE--TT---EE--EETTSCE--EECSEEEEC
T ss_pred ----cc---------------CHHHHHHHHHHHHHc-CcEEEeCCEEEEEE--CC---EE--EECCCCE--EEcCEEEEC
Confidence 00 012444555666666 89999996 88887 33 23 3467764 569999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
.|...+
T Consensus 235 ~G~~p~ 240 (408)
T 2gqw_A 235 IGVLAN 240 (408)
T ss_dssp SCEEEC
T ss_pred cCCCcc
Confidence 998754
No 236
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.8e-05 Score=81.54 Aligned_cols=34 Identities=26% Similarity=0.523 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++||+|||||++|+++|..|++.|.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5899999999999999999999999999999973
No 237
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.66 E-value=3e-05 Score=80.22 Aligned_cols=36 Identities=39% Similarity=0.445 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..+||+||||||+|+++|..|++.|++|+|+|+...
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 457999999999999999999999999999999853
No 238
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.66 E-value=2.9e-05 Score=80.56 Aligned_cols=34 Identities=35% Similarity=0.551 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3689999999999999999999999999999997
No 239
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.66 E-value=0.00042 Score=67.47 Aligned_cols=97 Identities=20% Similarity=0.157 Sum_probs=70.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---------~-------------------------------- 192 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---------Q-------------------------------- 192 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---------C--------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---------C--------------------------------
Confidence 35799999999999999999999999999998742110 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~ 211 (520)
. .+.+.+.+..+++++.++ ++++..+ +++.+|++.+ .+|+..++.+|.||.
T Consensus 193 ----------------------~----~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~ 245 (323)
T 3f8d_A 193 ----------------------P----IYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFI 245 (323)
T ss_dssp ----------------------H----HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ----------------------H----HHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEE
Confidence 0 011223333489999997 8888766 5555677665 457766788999999
Q ss_pred ecCCcch
Q 009994 212 CDGCFSN 218 (520)
Q Consensus 212 AdG~~S~ 218 (520)
|.|....
T Consensus 246 a~G~~p~ 252 (323)
T 3f8d_A 246 EIGFDPP 252 (323)
T ss_dssp CCCEECC
T ss_pred EECCCCC
Confidence 9996543
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.65 E-value=0.00021 Score=74.48 Aligned_cols=99 Identities=23% Similarity=0.332 Sum_probs=70.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
..-+|+|||||++|+-+|..|++.|.+|+|+|+.+... + .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~---------~~--------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG---------T---------IY--------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT---------S---------SS---------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh---------h---------cC---------------------
Confidence 34689999999999999999999999999999974210 0 00
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
...+.+.+.+.+++. |++++.++ |+++..+ +++..+. .+ +. ++.+|.||.
T Consensus 226 ----------------------~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~v~~v~--~~-~~--~i~~D~vi~ 276 (480)
T 3cgb_A 226 ----------------------DGDMAEYIYKEADKH-HIEILTNENVKAFKGN-ERVEAVE--TD-KG--TYKADLVLV 276 (480)
T ss_dssp ----------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SBEEEEE--ET-TE--EEECSEEEE
T ss_pred ----------------------CHHHHHHHHHHHHHc-CcEEEcCCEEEEEEcC-CcEEEEE--EC-CC--EEEcCEEEE
Confidence 012445566666666 89999887 8888765 4443333 33 33 467999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|.|..+..
T Consensus 277 a~G~~p~~ 284 (480)
T 3cgb_A 277 SVGVKPNT 284 (480)
T ss_dssp CSCEEESC
T ss_pred CcCCCcCh
Confidence 99987643
No 241
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.65 E-value=0.00031 Score=73.14 Aligned_cols=101 Identities=20% Similarity=0.224 Sum_probs=72.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++++... +. .+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~---------l~----------~~d---------------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV---------LR----------GFD---------------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS---------ST----------TSC----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC---------Cc----------ccC----------------------
Confidence 4799999999999999999999999999998520 00 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeEEEe
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVC 212 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~vV~A 212 (520)
..+.+.+.+.+++. |++++.++ +.++..++++...|++.+. +|+..++.+|.||.|
T Consensus 227 ---------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a 284 (483)
T 3dgh_A 227 ---------------------QQMAELVAASMEER-GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWA 284 (483)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEEC
T ss_pred ---------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEEC
Confidence 12344455556665 89999987 8888875543223555543 355566889999999
Q ss_pred cCCcch
Q 009994 213 DGCFSN 218 (520)
Q Consensus 213 dG~~S~ 218 (520)
.|....
T Consensus 285 ~G~~p~ 290 (483)
T 3dgh_A 285 IGRKGL 290 (483)
T ss_dssp SCEEEC
T ss_pred cccccC
Confidence 997654
No 242
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.63 E-value=2.7e-05 Score=80.52 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.++||+|||||++|+++|..|++.|.+|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3589999999999999999999999999999997
No 243
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.62 E-value=0.00036 Score=74.15 Aligned_cols=98 Identities=16% Similarity=0.233 Sum_probs=70.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++|+.+... +. +
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------~~---------~----------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM---------TP---------V----------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC---------TT---------S-----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc---------hh---------c-----------------------
Confidence 379999999999999999999999999999974210 00 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-------------------CCeEEEEEE
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-------------------NGTIKGVQY 194 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-------------------~~~v~gv~v 194 (520)
...+.+.+.+.+++. |++++.++ ++++..+ +++ +++
T Consensus 191 --------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~v 246 (565)
T 3ntd_A 191 --------------------DREMAGFAHQAIRDQ-GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH---LSL 246 (565)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE---EEE
T ss_pred --------------------CHHHHHHHHHHHHHC-CCEEEeCCeEEEEeccccccccccccccccccccCCCc---EEE
Confidence 012344455555555 89999886 8888763 443 445
Q ss_pred EeCCCcEEEEecCeEEEecCCcchh
Q 009994 195 KTKDGQELRAYAPLTIVCDGCFSNL 219 (520)
Q Consensus 195 ~~~~g~~~~~~ad~vV~AdG~~S~v 219 (520)
...+|++ +.+|.||.|.|.....
T Consensus 247 ~~~~g~~--i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 247 TLSNGEL--LETDLLIMAIGVRPET 269 (565)
T ss_dssp EETTSCE--EEESEEEECSCEEECC
T ss_pred EEcCCCE--EEcCEEEECcCCccch
Confidence 5577764 5699999999987653
No 244
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.60 E-value=4.7e-05 Score=83.09 Aligned_cols=37 Identities=35% Similarity=0.486 Sum_probs=34.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 51 NGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 51 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
....+||+|||||++|+++|..|+++|++|+|+|+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3456899999999999999999999999999999975
No 245
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.59 E-value=0.00043 Score=72.23 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+++++... +. .+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~---------l~----------~~d--------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP---------LR----------GFD--------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS---------ST----------TSC---------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc---------cc----------cCC---------------------
Confidence 34699999999999999999999999999998521 00 000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~~~~~ad~vV~ 211 (520)
..+.+.+.+.+++. +++++.++ +.++...+++...+++.+. +|+..++.+|.||.
T Consensus 225 ----------------------~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~ 281 (488)
T 3dgz_A 225 ----------------------QQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLW 281 (488)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEE
T ss_pred ----------------------HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEE
Confidence 12344455555665 89999987 8888774443233555543 36655678999999
Q ss_pred ecCCcchh
Q 009994 212 CDGCFSNL 219 (520)
Q Consensus 212 AdG~~S~v 219 (520)
|.|.....
T Consensus 282 a~G~~p~~ 289 (488)
T 3dgz_A 282 AIGRVPET 289 (488)
T ss_dssp CSCEEESC
T ss_pred cccCCccc
Confidence 99976543
No 246
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.59 E-value=0.00022 Score=74.62 Aligned_cols=99 Identities=12% Similarity=0.196 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhC---CCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEEC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKD 131 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~---G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 131 (520)
-.|+|||||..|+-+|..|++. |.+|+|+|+.+.. + + .+.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~--------l-~---------~~d------------------- 234 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI--------L-R---------GFD------------------- 234 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS--------C-T---------TSC-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc--------c-c---------ccC-------------------
Confidence 4799999999999999999999 9999999987521 0 0 000
Q ss_pred CccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEE
Q 009994 132 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 210 (520)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV 210 (520)
..+.+.+.+.+++. |++++.++ |+++..++++. +.+...+|+ ++.+|.||
T Consensus 235 ------------------------~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~--~i~~D~vv 285 (495)
T 2wpf_A 235 ------------------------ETIREEVTKQLTAN-GIEIMTNENPAKVSLNTDGS--KHVTFESGK--TLDVDVVM 285 (495)
T ss_dssp ------------------------HHHHHHHHHHHHHT-TCEEEESCCEEEEEECTTSC--EEEEETTSC--EEEESEEE
T ss_pred ------------------------HHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCce--EEEEECCCc--EEEcCEEE
Confidence 12334455556665 89999997 99988765432 344556776 46699999
Q ss_pred EecCCcchh
Q 009994 211 VCDGCFSNL 219 (520)
Q Consensus 211 ~AdG~~S~v 219 (520)
.|.|...+.
T Consensus 286 ~a~G~~p~~ 294 (495)
T 2wpf_A 286 MAIGRIPRT 294 (495)
T ss_dssp ECSCEEECC
T ss_pred ECCCCcccc
Confidence 999987654
No 247
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.59 E-value=0.00038 Score=72.16 Aligned_cols=96 Identities=16% Similarity=0.191 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+..-. +.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~~----------------------------------- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------ED----------------------------------- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------SC-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC------CC-----------------------------------
Confidence 5799999999999999999999999999999752100 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..+.+.+.+.+++. |++++.++ |+++..+++. +.+... +. ++.+|.||.|.
T Consensus 216 ---------------------~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~---~~v~~~-~~--~i~aD~Vv~a~ 267 (467)
T 1zk7_A 216 ---------------------PAIGEAVTAAFRAE-GIEVLEHTQASQVAHMDGE---FVLTTT-HG--ELRADKLLVAT 267 (467)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TCEEETTCCEEEEEEETTE---EEEEET-TE--EEEESEEEECS
T ss_pred ---------------------HHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCE---EEEEEC-Cc--EEEcCEEEECC
Confidence 12444555666666 89999987 9999876653 233444 33 46799999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|..+..
T Consensus 268 G~~p~~ 273 (467)
T 1zk7_A 268 GRTPNT 273 (467)
T ss_dssp CEEESC
T ss_pred CCCcCC
Confidence 988764
No 248
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.59 E-value=4.1e-05 Score=81.18 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcE--EEE-ecCeEEEecCCcc
Q 009994 160 QRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQE--LRA-YAPLTIVCDGCFS 217 (520)
Q Consensus 160 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~-~g~~--~~~-~ad~vV~AdG~~S 217 (520)
..+.+.+.+.++++++.++ |+++..++++++||++... +|+. .++ .++-||.|.|+..
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 3455666666799999998 9999988888999988653 4642 223 6899999999864
No 249
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00027 Score=70.92 Aligned_cols=92 Identities=23% Similarity=0.342 Sum_probs=67.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||+.|+-+|..|++.|.+|+++|+.+.... + .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~-------------~---------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------L-------------D---------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------C-------------C----------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------C-------------C----------------------
Confidence 4799999999999999999999999999999852110 0 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
..+.+.+.+.+++. |++++.++ ++++. .+ +|+ ..+|+ +.+|.||.|.
T Consensus 183 ---------------------~~~~~~l~~~l~~~-gV~i~~~~~v~~i~--~~---~v~--~~~g~---i~~D~vi~a~ 230 (367)
T 1xhc_A 183 ---------------------EELSNMIKDMLEET-GVKFFLNSELLEAN--EE---GVL--TNSGF---IEGKVKICAI 230 (367)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TEEEECSCCEEEEC--SS---EEE--ETTEE---EECSCEEEEC
T ss_pred ---------------------HHHHHHHHHHHHHC-CCEEEcCCEEEEEE--ee---EEE--ECCCE---EEcCEEEECc
Confidence 02344455556666 89999987 88876 22 233 45664 6699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|...+.
T Consensus 231 G~~p~~ 236 (367)
T 1xhc_A 231 GIVPNV 236 (367)
T ss_dssp CEEECC
T ss_pred CCCcCH
Confidence 987654
No 250
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.55 E-value=4.9e-05 Score=80.18 Aligned_cols=59 Identities=15% Similarity=0.330 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc
Q 009994 158 FIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 158 l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S 217 (520)
....+...++..++.++..++ |..+..+++++++|.+...++. .++.|+-||.|.|+-.
T Consensus 212 ~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~-~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 212 ADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQGS-AEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHSCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTEE-EEEEEEEEEECSHHHH
T ss_pred ccccccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCce-EEEeecceEEcccccC
Confidence 344455555666799999887 9999999999999999876554 5678999999999754
No 251
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.55 E-value=0.0005 Score=71.83 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=71.2
Q ss_pred CcEEEECCCHHHHHHHHHHhh----CCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEE
Q 009994 55 TDVIIVGAGVAGAALAHTLGK----DGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFK 130 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~----~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 130 (520)
-+|+|||||..|+-+|..|++ .|.+|+++++.+....+ .
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~---------------~---------------------- 223 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK---------------I---------------------- 223 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT---------------T----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc---------------c----------------------
Confidence 479999999999999999987 47899999987421000 0
Q ss_pred CCccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeE
Q 009994 131 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLT 209 (520)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~v 209 (520)
+ ...+.+.+.+.+++. |++++.++ |+++..+++. +.+...+|++ +.||.|
T Consensus 224 ----------------------l-~~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~~~~---~~v~l~dG~~--i~aD~V 274 (493)
T 1m6i_A 224 ----------------------L-PEYLSNWTMEKVRRE-GVKVMPNAIVQSVGVSSGK---LLIKLKDGRK--VETDHI 274 (493)
T ss_dssp ----------------------S-CHHHHHHHHHHHHTT-TCEEECSCCEEEEEEETTE---EEEEETTSCE--EEESEE
T ss_pred ----------------------C-CHHHHHHHHHHHHhc-CCEEEeCCEEEEEEecCCe---EEEEECCCCE--EECCEE
Confidence 0 012444556666666 89999997 9998876664 3455677864 569999
Q ss_pred EEecCCcch
Q 009994 210 IVCDGCFSN 218 (520)
Q Consensus 210 V~AdG~~S~ 218 (520)
|.|.|...+
T Consensus 275 v~a~G~~pn 283 (493)
T 1m6i_A 275 VAAVGLEPN 283 (493)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcc
Confidence 999998765
No 252
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.53 E-value=0.00034 Score=68.99 Aligned_cols=96 Identities=18% Similarity=0.250 Sum_probs=67.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+... . .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~---------~-----------~--------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR---------A-----------S--------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS---------S-----------C---------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC---------c-----------c---------------------
Confidence 3579999999999999999999999999999874210 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~ 211 (520)
..+.+.+ .++ .+++++.++ ++++..++ ++.+|.+.+ .+|+..++.+|.||.
T Consensus 194 ----------------------~~~~~~~---~~~-~gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~ 246 (335)
T 2a87_A 194 ----------------------KIMLDRA---RNN-DKIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFV 246 (335)
T ss_dssp ----------------------TTHHHHH---HHC-TTEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEE
T ss_pred ----------------------HHHHHHH---hcc-CCcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEE
Confidence 0011111 123 389999887 88887654 344566654 356545688999999
Q ss_pred ecCCcc
Q 009994 212 CDGCFS 217 (520)
Q Consensus 212 AdG~~S 217 (520)
|.|...
T Consensus 247 a~G~~p 252 (335)
T 2a87_A 247 AIGHEP 252 (335)
T ss_dssp CSCEEE
T ss_pred ccCCcc
Confidence 999654
No 253
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.48 E-value=8.7e-05 Score=81.45 Aligned_cols=37 Identities=32% Similarity=0.501 Sum_probs=34.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
...+||+||||||+|+++|..|++.|++|+|+|+...
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4568999999999999999999999999999999753
No 254
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.48 E-value=0.00014 Score=79.04 Aligned_cols=36 Identities=28% Similarity=0.441 Sum_probs=33.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...+||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~ 406 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 406 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456899999999999999999999999999999985
No 255
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.46 E-value=0.00058 Score=71.82 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=69.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+|+++..- +. .+.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~---------l~----------~~d---------------------- 249 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL---------LR----------GFD---------------------- 249 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS---------ST----------TSC----------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc---------cc----------cCC----------------------
Confidence 4699999999999999999999999999998520 00 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC---eEEEEEEEeCCCc-EEEEecCeE
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG---TIKGVQYKTKDGQ-ELRAYAPLT 209 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~---~v~gv~v~~~~g~-~~~~~ad~v 209 (520)
..+.+.+.+.+++. |++++.++ ++++...++ ....+++...+|+ ..++.+|.|
T Consensus 250 ---------------------~~~~~~~~~~l~~~-GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~v 307 (519)
T 3qfa_A 250 ---------------------QDMANKIGEHMEEH-GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 307 (519)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEE
T ss_pred ---------------------HHHHHHHHHHHHHC-CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEE
Confidence 12344455555555 89999886 677765321 2223555555653 356779999
Q ss_pred EEecCCcch
Q 009994 210 IVCDGCFSN 218 (520)
Q Consensus 210 V~AdG~~S~ 218 (520)
|.|.|....
T Consensus 308 i~a~G~~p~ 316 (519)
T 3qfa_A 308 MLAIGRDAC 316 (519)
T ss_dssp EECSCEEES
T ss_pred EEecCCccc
Confidence 999997643
No 256
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.45 E-value=0.00011 Score=76.35 Aligned_cols=37 Identities=30% Similarity=0.451 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTE 89 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~~~ 89 (520)
..+||+|||||++|+++|+.|++.|. +|+|+|+....
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 35799999999999999999999999 89999998643
No 257
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.45 E-value=0.0011 Score=68.97 Aligned_cols=103 Identities=17% Similarity=0.168 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||||..|+-+|..|++.|.+|+++++.+.. + + .+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~--------l-~---------~~---------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV--------L-R---------SF---------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS--------C-T---------TS----------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc--------c-c---------cc----------------------
Confidence 357999999999999999999999999999997421 0 0 00
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCC---CcE--EEEecC
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKD---GQE--LRAYAP 207 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~---g~~--~~~~ad 207 (520)
...+.+.+.+.+++. +++++.++ ++++..++++.. +.+...+ |+. .++.+|
T Consensus 227 ---------------------d~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~-~~v~~~~~~~g~~~g~~~~~D 283 (478)
T 3dk9_A 227 ---------------------DSMISTNCTEELENA-GVEVLKFSQVKEVKKTLSGLE-VSMVTAVPGRLPVMTMIPDVD 283 (478)
T ss_dssp ---------------------CHHHHHHHHHHHHHT-TCEEETTEEEEEEEECSSSEE-EEEEECCTTSCCEEEEEEEES
T ss_pred ---------------------CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcE-EEEEEccCCCCcccceEEEcC
Confidence 012344455555555 89999987 888887654411 3333333 332 467899
Q ss_pred eEEEecCCcchh
Q 009994 208 LTIVCDGCFSNL 219 (520)
Q Consensus 208 ~vV~AdG~~S~v 219 (520)
.||.|.|.....
T Consensus 284 ~vi~a~G~~p~~ 295 (478)
T 3dk9_A 284 CLLWAIGRVPNT 295 (478)
T ss_dssp EEEECSCEEESC
T ss_pred EEEEeeccccCC
Confidence 999999976543
No 258
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.44 E-value=0.00047 Score=72.63 Aligned_cols=98 Identities=16% Similarity=0.230 Sum_probs=73.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-.++|||||+.|+-+|..+++.|.+|+|++++.. |. +.+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~---------L~----------~~D--------------------- 262 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV---------LR----------GFD--------------------- 262 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS---------ST----------TSC---------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc---------cc----------ccc---------------------
Confidence 35799999999999999999999999999987520 00 001
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEe
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 212 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~A 212 (520)
.++.+.+.+.+++. ++.++.+. +..+...++. +.+...+++.. .+|.|+.|
T Consensus 263 ----------------------~ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~~~~---~~v~~~~~~~~--~~D~vLvA 314 (542)
T 4b1b_A 263 ----------------------QQCAVKVKLYMEEQ-GVMFKNGILPKKLTKMDDK---ILVEFSDKTSE--LYDTVLYA 314 (542)
T ss_dssp ----------------------HHHHHHHHHHHHHT-TCEEEETCCEEEEEEETTE---EEEEETTSCEE--EESEEEEC
T ss_pred ----------------------hhHHHHHHHHHHhh-cceeecceEEEEEEecCCe---EEEEEcCCCeE--EEEEEEEc
Confidence 12444555666666 89999987 8888888874 45666677654 48999999
Q ss_pred cCCcchh
Q 009994 213 DGCFSNL 219 (520)
Q Consensus 213 dG~~S~v 219 (520)
.|...++
T Consensus 315 vGR~Pnt 321 (542)
T 4b1b_A 315 IGRKGDI 321 (542)
T ss_dssp SCEEESC
T ss_pred ccccCCc
Confidence 9977655
No 259
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.39 E-value=0.00014 Score=78.91 Aligned_cols=38 Identities=34% Similarity=0.440 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
....||+|||||++||++|..|++.|++|+|+|+....
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998643
No 260
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.39 E-value=0.0014 Score=70.04 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=68.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+|+|+.. . .+ ++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~---------l~---------~~d---------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-L---------LR---------GFD---------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-S---------ST---------TSC----------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-C---------cC---------cCC----------------------
Confidence 379999999999999999999999999999861 0 00 000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee------C---CeEEEEEEEeCCCcEEEE
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE------N---GTIKGVQYKTKDGQELRA 204 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~------~---~~v~gv~v~~~~g~~~~~ 204 (520)
..+.+.+.+.+++. |++++.++ ++++... + +.+. +++...+|++.++
T Consensus 326 ---------------------~~~~~~~~~~l~~~-gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~ 382 (598)
T 2x8g_A 326 ---------------------QQMAEKVGDYMENH-GVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEE 382 (598)
T ss_dssp ---------------------HHHHHHHHHHHHHT-TCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEE
T ss_pred ---------------------HHHHHHHHHHHHhC-CCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEec
Confidence 01223334444555 89999886 7676542 2 3322 4444567876666
Q ss_pred ecCeEEEecCCcchh
Q 009994 205 YAPLTIVCDGCFSNL 219 (520)
Q Consensus 205 ~ad~vV~AdG~~S~v 219 (520)
.+|.||.|.|.....
T Consensus 383 ~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 383 EFETVIFAVGREPQL 397 (598)
T ss_dssp EESEEEECSCEEECG
T ss_pred cCCEEEEEeCCcccc
Confidence 799999999976543
No 261
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.37 E-value=0.0011 Score=68.57 Aligned_cols=102 Identities=22% Similarity=0.341 Sum_probs=69.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+... . . .
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------~-~---------~---------------------- 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL--------I-T---------L---------------------- 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------T-T---------S----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC--------C-C---------C----------------------
Confidence 3579999999999999999999999999999975210 0 0 0
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~~v~gv~v~~~~g~~~~~~ad~vV~ 211 (520)
....+.+.+.+.++ ++++.++ ++++..++ +.+. +.+...+|+..++.+|.||.
T Consensus 212 --------------------~d~~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~ 266 (466)
T 3l8k_A 212 --------------------EDQDIVNTLLSILK----LNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVL 266 (466)
T ss_dssp --------------------CCHHHHHHHHHHHC----CCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEE
T ss_pred --------------------CCHHHHHHHHhcCE----EEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEE
Confidence 00113333444332 7788876 88888766 6432 33322267655678999999
Q ss_pred ecCCcchhh
Q 009994 212 CDGCFSNLR 220 (520)
Q Consensus 212 AdG~~S~vR 220 (520)
|.|......
T Consensus 267 a~G~~p~~~ 275 (466)
T 3l8k_A 267 AAGRRPVIP 275 (466)
T ss_dssp CCCEEECCC
T ss_pred CcCCCcccc
Confidence 999876543
No 262
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.36 E-value=6.4e-05 Score=79.45 Aligned_cols=49 Identities=27% Similarity=0.371 Sum_probs=39.1
Q ss_pred CCCeEEEece-EEEEEeeCC---eEEEEEEEeCCCcEEEE---ecCeEEEecCCcc
Q 009994 169 LPNVRLEQGT-VTSLLEENG---TIKGVQYKTKDGQELRA---YAPLTIVCDGCFS 217 (520)
Q Consensus 169 ~~~v~i~~~~-v~~~~~~~~---~v~gv~v~~~~g~~~~~---~ad~vV~AdG~~S 217 (520)
.+|++++.++ |+++..+++ +++||++...+|+..++ .++-||.|.|+..
T Consensus 206 ~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~ 261 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261 (536)
T ss_dssp TTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccC
Confidence 4589999987 999987753 78999988767776555 5789999999863
No 263
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.36 E-value=0.00018 Score=79.74 Aligned_cols=38 Identities=34% Similarity=0.440 Sum_probs=34.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
....+|+|||||++||++|+.|+++|++|+|+|+....
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 34679999999999999999999999999999998643
No 264
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.34 E-value=0.00095 Score=65.26 Aligned_cols=95 Identities=21% Similarity=0.178 Sum_probs=68.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCc
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGK 133 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 133 (520)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+.. .+ ..+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~---------~~----------~~~-------------------- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKF---------RA----------HEH-------------------- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSC---------SS----------CHH--------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcC---------Cc----------cHH--------------------
Confidence 357999999999999999999999999999987421 00 000
Q ss_pred cccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEEE
Q 009994 134 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIV 211 (520)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV~ 211 (520)
.. +.+++. +++++.++ +.++..+++ +.+|++.+ .+|+..++.+|.||.
T Consensus 195 ------------------------~~----~~l~~~-gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 195 ------------------------SV----ENLHAS-KVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp ------------------------HH----HHHHHS-SCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEE
T ss_pred ------------------------HH----HHHhcC-CeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEE
Confidence 01 112334 89999886 888877655 45577766 455566788999999
Q ss_pred ecCCcc
Q 009994 212 CDGCFS 217 (520)
Q Consensus 212 AdG~~S 217 (520)
|.|...
T Consensus 245 a~G~~p 250 (332)
T 3lzw_A 245 NYGFVS 250 (332)
T ss_dssp CCCEEC
T ss_pred eeccCC
Confidence 999653
No 265
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.34 E-value=0.00097 Score=71.25 Aligned_cols=96 Identities=19% Similarity=0.265 Sum_probs=70.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~~----------------------- 226 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------------PI----------------------- 226 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------TS-----------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------------cC-----------------------
Confidence 4799999999999999999999999999998742100 00
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
...+.+.+.+.+++. |++++.++ |+++..+++. |. ..+|++ +.+|.||.|.
T Consensus 227 --------------------~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~---v~--~~~g~~--i~~D~Vi~a~ 278 (588)
T 3ics_A 227 --------------------DYEMAAYVHEHMKNH-DVELVFEDGVDALEENGAV---VR--LKSGSV--IQTDMLILAI 278 (588)
T ss_dssp --------------------CHHHHHHHHHHHHHT-TCEEECSCCEEEEEGGGTE---EE--ETTSCE--EECSEEEECS
T ss_pred --------------------CHHHHHHHHHHHHHc-CCEEEECCeEEEEecCCCE---EE--ECCCCE--EEcCEEEEcc
Confidence 012344555556665 89999887 8888765553 33 456764 5699999999
Q ss_pred CCcchh
Q 009994 214 GCFSNL 219 (520)
Q Consensus 214 G~~S~v 219 (520)
|.....
T Consensus 279 G~~p~~ 284 (588)
T 3ics_A 279 GVQPES 284 (588)
T ss_dssp CEEECC
T ss_pred CCCCCh
Confidence 987653
No 266
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.29 E-value=0.00013 Score=75.46 Aligned_cols=34 Identities=29% Similarity=0.282 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-C------CCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGK-D------GRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~-~------G~~V~v~Er~~ 87 (520)
.+||+||||||+|+++|..|++ . |.+|+|+|+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~ 43 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 43 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCC
Confidence 5799999999999999999999 7 99999999985
No 267
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.28 E-value=0.002 Score=66.49 Aligned_cols=48 Identities=17% Similarity=0.114 Sum_probs=34.8
Q ss_pred CeEEEece-EEEEEeeC-C-eEEEEEEEeC-------------CCcEEEEecCeEEEecCCcch
Q 009994 171 NVRLEQGT-VTSLLEEN-G-TIKGVQYKTK-------------DGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 171 ~v~i~~~~-v~~~~~~~-~-~v~gv~v~~~-------------~g~~~~~~ad~vV~AdG~~S~ 218 (520)
++.+++++ ++++..++ + ++.+|++... +|+..++.||+||.|.|..+.
T Consensus 271 gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 271 AWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred eEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 79999997 88887653 4 6666766421 455556889999999997654
No 268
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.27 E-value=0.0024 Score=63.48 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=68.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|.+|+-+|..|++.|.+|+++|+.+... .+. .. . .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~--------~~~---------~d----~----------------~ 209 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN--------DPD---------AD----P----------------S 209 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------C----------------T
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC--------CCC---------CC----C----------------C
Confidence 479999999999999999999999999999974210 000 00 0 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
... ...+.+.+.+.+++.++++++.++ ++++..+++. +.+...+|+.. ..+|.||.|+
T Consensus 210 --~~~---------------~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~---~~v~~~~g~~~-~~~d~vi~a~ 268 (369)
T 3d1c_A 210 --VRL---------------SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ---YHISFDSGQSV-HTPHEPILAT 268 (369)
T ss_dssp --TSC---------------CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE---EEEEESSSCCE-EESSCCEECC
T ss_pred --ccC---------------CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc---eEEEecCCeEe-ccCCceEEee
Confidence 000 112445555666665239999886 8888766653 34556777643 2469999999
Q ss_pred CCcch
Q 009994 214 GCFSN 218 (520)
Q Consensus 214 G~~S~ 218 (520)
|....
T Consensus 269 G~~~~ 273 (369)
T 3d1c_A 269 GFDAT 273 (369)
T ss_dssp CBCGG
T ss_pred ccCCc
Confidence 97643
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.21 E-value=0.0023 Score=62.10 Aligned_cols=33 Identities=30% Similarity=0.403 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-+|+|||||..|+-+|..|++.|.+|+|+||..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 579999999999999999999999999999864
No 270
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.21 E-value=0.00019 Score=75.04 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=32.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
+.++||+|||||+||+++|..|++. |.+|+|+|+.+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~ 47 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPE 47 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 3468999999999999999999887 899999999864
No 271
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.18 E-value=0.00021 Score=81.45 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.+||+||||||||+++|..|++.|+ +|+|+|+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~ 221 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE 221 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 5799999999999999999999999 799999975
No 272
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.16 E-value=0.00026 Score=73.22 Aligned_cols=34 Identities=29% Similarity=0.448 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--CeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~ 87 (520)
.+||+|||||++|+.+|..|++.| .+|+|+|+.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~ 41 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQL 41 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 579999999999999999999998 9999999985
No 273
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.15 E-value=0.00031 Score=73.67 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=44.6
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEecCeEEEecCCcch
Q 009994 160 QRMREKAASLPNVRLEQGT-VTSLLEEN-G-TIKGVQYKTKDG---QELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 160 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~-~-~v~gv~v~~~~g---~~~~~~ad~vV~AdG~~S~ 218 (520)
..+...+.+.++++++.++ |+++..++ + ++++|++...+| +..+++|+-||.|.|+...
T Consensus 230 ~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 230 KTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp TTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 3344455556789999997 99998775 4 688999876566 3567889999999998743
No 274
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.13 E-value=0.0019 Score=68.06 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45799999999999999999999999999999864
No 275
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.12 E-value=0.0014 Score=67.72 Aligned_cols=59 Identities=14% Similarity=0.075 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcC-----CCeEEEece-EEEEEeeCCeEEEEEEEe--------------CCCcEEEEecCeEEEecCCcc
Q 009994 158 FIQRMREKAASL-----PNVRLEQGT-VTSLLEENGTIKGVQYKT--------------KDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 158 l~~~L~~~~~~~-----~~v~i~~~~-v~~~~~~~~~v~gv~v~~--------------~~g~~~~~~ad~vV~AdG~~S 217 (520)
+.+.|.+.+.+. .++.+++++ ++++..+ +++.+|++.. .+|+..++.||+||.|.|..+
T Consensus 248 ~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 248 NIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp HHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred HHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 345566656541 379999997 8888754 4455565542 245555688999999999664
No 276
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.11 E-value=0.00027 Score=74.01 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=44.2
Q ss_pred HHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEecCeEEEecCCcch
Q 009994 162 MREKAASLPNVRLEQGT-VTSLLEEN-G-TIKGVQYKTKDG---QELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 162 L~~~~~~~~~v~i~~~~-v~~~~~~~-~-~v~gv~v~~~~g---~~~~~~ad~vV~AdG~~S~ 218 (520)
+.+.+.+.++++++.++ |+++..++ + ++++|++...+| +..+++|+-||.|.|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 34455556789999997 99998774 3 788998876666 4567889999999998744
No 277
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.10 E-value=0.002 Score=66.34 Aligned_cols=96 Identities=25% Similarity=0.380 Sum_probs=67.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-+|+|||+|..|+-+|..|++.|.+|+++|+.+.....
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR------------------------------------------ 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh------------------------------------------
Confidence 48999999999999999999999999999997521000
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEec
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 213 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~Ad 213 (520)
.+ ...+.+.+.+.+++. ++++.++ +.++..++ ++..+ ..+|+ ++.+|.||.|.
T Consensus 187 ---~~---------------~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~~~-~v~~v---~~~g~--~i~~D~Vv~a~ 240 (449)
T 3kd9_A 187 ---SF---------------DKEVTDILEEKLKKH--VNLRLQEITMKIEGEE-RVEKV---VTDAG--EYKAELVILAT 240 (449)
T ss_dssp ---TS---------------CHHHHHHHHHHHTTT--SEEEESCCEEEEECSS-SCCEE---EETTE--EEECSEEEECS
T ss_pred ---hc---------------CHHHHHHHHHHHHhC--cEEEeCCeEEEEeccC-cEEEE---EeCCC--EEECCEEEEee
Confidence 00 013455566666654 8888887 88887554 33222 23454 46699999999
Q ss_pred CCcch
Q 009994 214 GCFSN 218 (520)
Q Consensus 214 G~~S~ 218 (520)
|....
T Consensus 241 G~~p~ 245 (449)
T 3kd9_A 241 GIKPN 245 (449)
T ss_dssp CEEEC
T ss_pred CCccC
Confidence 98654
No 278
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.97 E-value=0.0033 Score=64.47 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-+|+|||||+.|+-+|..|++.|.+|+|+|+..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 180 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD 180 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeec
Confidence 479999999999999999999999999999874
No 279
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.96 E-value=0.00097 Score=70.47 Aligned_cols=35 Identities=17% Similarity=0.361 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.-+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35799999999999999999999999999999864
No 280
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.95 E-value=0.00031 Score=75.85 Aligned_cols=34 Identities=32% Similarity=0.436 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--------CeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG--------RRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G--------~~V~v~Er~~ 87 (520)
..+|+|||||++||++|+.|++.| ++|+|+|++.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 468999999999999999999999 9999999986
No 281
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.88 E-value=0.0021 Score=61.67 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.-+|+|||+|+.|+-+|..|++.| +|+++++..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 357999999999999999999999 999998864
No 282
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.81 E-value=0.0038 Score=65.23 Aligned_cols=55 Identities=15% Similarity=0.109 Sum_probs=37.4
Q ss_pred HHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcE--EEEecCeEEEecCCc
Q 009994 158 FIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQE--LRAYAPLTIVCDGCF 216 (520)
Q Consensus 158 l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~--~~~~ad~vV~AdG~~ 216 (520)
+.+.+.+.+++. ||+++.++ |++++. +.+. +.....+|+. .++.+|+||-|.|..
T Consensus 274 ~~~~~~~~L~~~-GV~v~~~~~v~~v~~--~~~~-~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 274 LSSYAQSHLENT-SIKVHLRTAVAKVEE--KQLL-AKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHT-TCEEETTEEEEEECS--SEEE-EEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhc-ceeeecCceEEEEeC--CceE-EEEEecCcccceeeeccCEEEEccCCc
Confidence 455555666666 89999998 877753 3222 3444566653 468899999999964
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.76 E-value=0.0031 Score=71.31 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=69.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECCcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKS 134 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 134 (520)
-.|+|||+|+.|+-+|..|++.|.+|+|+|+.+... +
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~---------~---------------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS---------A---------------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC---------H----------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc---------h----------------------------------
Confidence 479999999999999999999999999999975210 0
Q ss_pred ccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe--C---CCcEEEEecC
Q 009994 135 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT--K---DGQELRAYAP 207 (520)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~-~~~v~gv~v~~--~---~g~~~~~~ad 207 (520)
. .+.+++. ||+++.++ ++++..+ ++++.+|++.+ . +|+..++.+|
T Consensus 322 ----------------------~-----~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D 373 (965)
T 2gag_A 322 ----------------------A-----AAQAVAD-GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEAD 373 (965)
T ss_dssp ----------------------H-----HHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECS
T ss_pred ----------------------h-----HHHHHhC-CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcC
Confidence 0 1222334 79999887 8888764 56666777765 2 3544568899
Q ss_pred eEEEecCCcch
Q 009994 208 LTIVCDGCFSN 218 (520)
Q Consensus 208 ~vV~AdG~~S~ 218 (520)
.||.|.|....
T Consensus 374 ~Vv~a~G~~P~ 384 (965)
T 2gag_A 374 VLAVAGGFNPV 384 (965)
T ss_dssp EEEEECCEEEC
T ss_pred EEEECCCcCcC
Confidence 99999997654
No 284
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.61 E-value=0.0072 Score=68.74 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
+|+|||||..|+-+|..|++.|. +|+|++|.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 89999999999999999999997 899999974
No 285
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.59 E-value=0.0063 Score=66.23 Aligned_cols=97 Identities=11% Similarity=0.133 Sum_probs=66.1
Q ss_pred CcEEEEC--CCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeeccchHHHHHhcCchhHHhhcccceeceEEEEECC
Q 009994 55 TDVIIVG--AGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDG 132 (520)
Q Consensus 55 ~dV~IVG--aG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~~~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 132 (520)
-+|+||| +|..|+-+|..|++.|.+|+++++.+..... ...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~----------------------~~~--------------- 566 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW----------------------TNN--------------- 566 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG----------------------GGG---------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc----------------------ccc---------------
Confidence 4699999 9999999999999999999999987421000 000
Q ss_pred ccccccCCCcCCCCCccceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCeEE
Q 009994 133 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTI 210 (520)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~-~~g~~~~~~ad~vV 210 (520)
..+...+.+.+++. |++++.++ |+++..++ +.+.. .+++..++.+|.||
T Consensus 567 -----------------------~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~-----~~v~~~~~~~~~~i~aD~VV 617 (690)
T 3k30_A 567 -----------------------TFEVNRIQRRLIEN-GVARVTDHAVVAVGAGG-----VTVRDTYASIERELECDAVV 617 (690)
T ss_dssp -----------------------GTCHHHHHHHHHHT-TCEEEESEEEEEEETTE-----EEEEETTTCCEEEEECSEEE
T ss_pred -----------------------chhHHHHHHHHHHC-CCEEEcCcEEEEEECCe-----EEEEEccCCeEEEEECCEEE
Confidence 00123344555555 89999997 88886432 33332 23444567899999
Q ss_pred EecCCcc
Q 009994 211 VCDGCFS 217 (520)
Q Consensus 211 ~AdG~~S 217 (520)
.|.|...
T Consensus 618 ~A~G~~p 624 (690)
T 3k30_A 618 MVTARLP 624 (690)
T ss_dssp EESCEEE
T ss_pred ECCCCCC
Confidence 9999654
No 286
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.58 E-value=0.0017 Score=69.22 Aligned_cols=37 Identities=27% Similarity=0.480 Sum_probs=34.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.++|||+|||+|..|+.+|..|++.|.+|+++||+..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~ 42 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSY 42 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCc
Confidence 3479999999999999999999999999999999864
No 287
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.54 E-value=0.049 Score=52.55 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 379999999999999999999999999999974
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.52 E-value=0.0015 Score=68.99 Aligned_cols=35 Identities=17% Similarity=0.378 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.-+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35799999999999999999999999999999864
No 289
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.40 E-value=0.0039 Score=64.28 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.-+|+|||||.+|+-+|..+.+.|. +|++++|+.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 4579999999999999999999998 599999975
No 290
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.39 E-value=0.01 Score=60.96 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCe-EEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~-V~v~Er~~ 87 (520)
.-+|+|||+|.+|+-+|..|++.|.+ |+|++|..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 35799999999999999999999999 99999975
No 291
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.19 E-value=0.015 Score=59.90 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.-+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 3579999999999999999999999999999875
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.11 E-value=0.016 Score=62.69 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcch
Q 009994 160 QRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 218 (520)
Q Consensus 160 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S~ 218 (520)
..+.+.+++. ||+++.++ ++++.. ++ +.+. .+|+..++.+|.||.|.|....
T Consensus 577 ~~~~~~l~~~-GV~v~~~~~v~~i~~--~~---v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 577 WIHRTTLLSR-GVKMIPGVSYQKIDD--DG---LHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHHHHT-TCEEECSCEEEEEET--TE---EEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHHHHhc-CCEEEeCcEEEEEeC--Ce---EEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 3445555555 89999987 877763 32 4443 4676567889999999997653
No 293
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.07 E-value=0.0088 Score=50.66 Aligned_cols=36 Identities=25% Similarity=0.292 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 344579999999999999999999999999999985
No 294
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.03 E-value=0.0042 Score=62.50 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~ 180 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEY 180 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 4799999999999999999999999999999864
No 295
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.01 E-value=0.0066 Score=52.43 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
...|+|+|+|..|..+|..|.+.|.+|+++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 45799999999999999999999999999999753
No 296
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.79 E-value=0.0094 Score=50.01 Aligned_cols=33 Identities=33% Similarity=0.556 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|+|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 297
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.48 E-value=0.017 Score=49.65 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999973
No 298
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.47 E-value=0.014 Score=47.32 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC-CeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~ 87 (520)
..|+|+|+|..|..++..|.+.| .+|++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999974
No 299
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.43 E-value=0.015 Score=49.14 Aligned_cols=33 Identities=24% Similarity=0.548 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 379999999999999999999999999999974
No 300
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.35 E-value=0.043 Score=59.97 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.8
Q ss_pred CcEEEEC--CCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVG--AGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVG--aG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-+|+||| ||..|+-+|..|++.|.+|+|+|+.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4799998 99999999999999999999999873
No 301
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.62 E-value=0.031 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC-CCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~Er~~ 87 (520)
...|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999974
No 302
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.61 E-value=0.028 Score=47.19 Aligned_cols=32 Identities=19% Similarity=0.427 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|+|+|+|..|..+|..|.+.|.+|++++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999864
No 303
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.29 E-value=0.033 Score=50.90 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=30.6
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999875
No 304
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.28 E-value=0.047 Score=52.68 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999974
No 305
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.05 E-value=0.048 Score=53.16 Aligned_cols=32 Identities=28% Similarity=0.602 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.+|.|||+|..|.+.|..|++.|.+|+++.|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 57999999999999999999999999999996
No 306
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.03 E-value=0.11 Score=52.77 Aligned_cols=53 Identities=15% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc
Q 009994 159 IQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 159 ~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S 217 (520)
.+.+.+.+++. ||+++.++ |++++. + ++++.+.+++..++.+|+||.|.|...
T Consensus 203 ~~~l~~~l~~~-GV~i~~~~~v~~v~~--~---~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP--D---KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS--S---EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHC-CCEEEeCCEEEEEeC--C---eEEEEecCCCceEEeeeEEEECCCCcc
Confidence 44455556665 89999987 888754 2 245555444445678999999998653
No 307
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.02 E-value=0.13 Score=49.46 Aligned_cols=33 Identities=6% Similarity=0.037 Sum_probs=26.5
Q ss_pred CcEEEECCCH-HHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGV-AGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~-aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+++|||||. +++.+|..+++.|.+|+++++..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 4678888885 56788889999999999998753
No 308
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.01 E-value=0.047 Score=53.00 Aligned_cols=33 Identities=33% Similarity=0.573 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-.|.|||||..|...|..++++|++|+|+|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999874
No 309
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.01 E-value=0.26 Score=50.10 Aligned_cols=53 Identities=9% Similarity=0.083 Sum_probs=33.2
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc---EEEEecCeEEEecCCc
Q 009994 160 QRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQ---ELRAYAPLTIVCDGCF 216 (520)
Q Consensus 160 ~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~---~~~~~ad~vV~AdG~~ 216 (520)
..+.+.+++. ||+++.++ |+++.. +++. ++..+.+|+ ..++.+|++|.|.|..
T Consensus 212 ~~~~~~l~~~-gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 212 GILTKGLKEE-GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp HHHHHHHHHT-TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHHHHHC-CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcCCCc
Confidence 3444555555 89999987 888753 3322 222234543 3567899999998843
No 310
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.82 E-value=0.055 Score=56.94 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
...|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 35799999999999999999999999999999753
No 311
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.75 E-value=0.063 Score=52.57 Aligned_cols=34 Identities=15% Similarity=0.221 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..+|.|||||-.|.++|..|++.|+ +|+++|++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999984
No 312
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.55 E-value=0.04 Score=56.67 Aligned_cols=60 Identities=23% Similarity=0.348 Sum_probs=42.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCc----eeeeeec--cchHHHHHhcCchh
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR----IVGELLQ--PGGYLKLVELGLED 113 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~----~~g~~l~--~~~~~~l~~lGl~~ 113 (520)
.++|+|+|+|-.|..+|..|...|++|+|+|++++.-.+ .-...+. +.-.+.|++.|+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ 68 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQD 68 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCc
Confidence 467999999999999999999999999999998532111 0011222 23346778888763
No 313
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.53 E-value=0.055 Score=52.50 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.+|.|||+|-.|.+.|..|++.|.+|+++.|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 57999999999999999999999999999986
No 314
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.52 E-value=0.074 Score=50.70 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||+|..|.+.|..|++.|++|++++|+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999985
No 315
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.42 E-value=0.085 Score=47.91 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..+|.|||+|-.|.+.|..|++.|.+|++++|++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999999753
No 316
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.41 E-value=0.073 Score=51.71 Aligned_cols=34 Identities=26% Similarity=0.515 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
..+|+|||+|-.|.++|..|++.|. +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999999 999999973
No 317
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.36 E-value=0.07 Score=55.06 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++|.|||+|-.|+.+|..|++.|++|++++++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999874
No 318
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.35 E-value=0.085 Score=50.36 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 469999999999999999999999999999974
No 319
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.32 E-value=0.072 Score=51.84 Aligned_cols=33 Identities=33% Similarity=0.573 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|.+.|..|++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999985
No 320
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.28 E-value=0.097 Score=47.95 Aligned_cols=34 Identities=18% Similarity=0.364 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 3468999999999999999999999999999975
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.27 E-value=0.091 Score=52.58 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|++|+.+|..|...|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999985
No 322
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.21 E-value=0.083 Score=51.81 Aligned_cols=32 Identities=38% Similarity=0.621 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
.+|.|||+|-.|.+.|..|++.|.+|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999985
No 323
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.00 E-value=0.087 Score=53.91 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|.|||+|..|+.+|..|++.|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 579999999999999999999999999999974
No 324
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.96 E-value=0.1 Score=51.59 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999974
No 325
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.89 E-value=0.16 Score=49.56 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHH-HHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAA-LAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~-~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||.|.+|++ +|..|.++|++|.+.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999996 8999999999999999975
No 326
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.87 E-value=0.17 Score=51.66 Aligned_cols=33 Identities=30% Similarity=0.541 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 579999999999999999999999999999985
No 327
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.86 E-value=0.095 Score=50.56 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|.|||+|..|.+.|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999873
No 328
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.83 E-value=0.078 Score=49.64 Aligned_cols=33 Identities=30% Similarity=0.511 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..|+|||+|..|..+|..|++.|+ +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999984
No 329
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.78 E-value=0.078 Score=54.15 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
..|+|||.|++|+++|..|+++|++|++.|.+...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 36999999999999999999999999999987643
No 330
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.77 E-value=0.12 Score=50.52 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.+|.|||||..|.++|..|++.|+ +|+++|++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999999 999999974
No 331
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.77 E-value=0.1 Score=50.70 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..+|.|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3579999999999999999999998 999999974
No 332
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.70 E-value=0.056 Score=45.75 Aligned_cols=33 Identities=21% Similarity=0.452 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|||+|..|...|..|.+.|.+|++++|+.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999874
No 333
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.69 E-value=0.11 Score=52.98 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=32.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
...+.|||.|-.|+.+|..|++.|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 334
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.66 E-value=0.11 Score=53.21 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|.|||.|.+|+++|..|+++|++|++.|+..
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3479999999999999999999999999999874
No 335
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.63 E-value=0.068 Score=51.34 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|-.|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999984
No 336
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.56 E-value=0.11 Score=53.49 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC-CC-eEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKD-GR-RVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~-G~-~V~v~Er~~~ 88 (520)
..+|.|||+|..|+.+|..|++. |+ +|+++++++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35799999999999999999999 99 9999999864
No 337
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.55 E-value=0.068 Score=50.63 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|||||.+|+..|..|.+.|.+|+|++...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4579999999999999999999999999999763
No 338
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.47 E-value=0.13 Score=52.18 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++...|.|||.|-+||.+|..|++.|++|+.+|.++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 345689999999999999999999999999999874
No 339
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.42 E-value=0.36 Score=48.44 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCeEEEecCCcc
Q 009994 158 FIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 217 (520)
Q Consensus 158 l~~~L~~~~~~~~~v~i~~~~-v~~~~~~~~~v~gv~v~~~~g~~~~~~ad~vV~AdG~~S 217 (520)
+.+.+.+.+++. ||+++.++ |+++..+ . | ...+|++ +.+|+||.|.|...
T Consensus 220 ~~~~~~~~l~~~-gV~~~~~~~v~~i~~~--~---v--~~~~g~~--~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQL-GIKLVHNFKIKEIREH--E---I--VDEKGNT--IPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHH-TCEEECSCCEEEECSS--E---E--EETTSCE--EECSEEEEECCEEC
T ss_pred HHHHHHHHHHHC-CCEEEcCCceEEECCC--e---E--EECCCCE--EeeeEEEECCCCCc
Confidence 334444555554 89999987 8888642 2 3 3467764 56999999999654
No 340
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.34 E-value=0.13 Score=49.35 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=31.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++..|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 34678999999999999999999 999999999974
No 341
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.22 E-value=0.13 Score=52.00 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
+..|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 34799999999999999999999999999999853
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.21 E-value=0.13 Score=49.69 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|+|||+|-.|.+.|..|+ .|.+|+++.|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999973
No 343
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.20 E-value=0.14 Score=49.58 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||.|..|...|..|++.|++|++++|++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3579999999999999999999999999999985
No 344
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.20 E-value=0.11 Score=51.62 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|.+|+.+|..|...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999984
No 345
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.19 E-value=0.14 Score=50.22 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++++|.|||+|..|.+.|..|++.|++|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45789999999999999999999999999999873
No 346
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.19 E-value=0.13 Score=50.63 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|..|...|..|++.|++|++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999874
No 347
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.07 E-value=0.14 Score=49.42 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
+|.|||||-.|.++|..|+..|+ +|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999873
No 348
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.03 E-value=0.14 Score=51.87 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...+|.|||+|..|+.+|..|++ |++|+++++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999975
No 349
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.00 E-value=0.17 Score=48.99 Aligned_cols=33 Identities=27% Similarity=0.427 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~ 86 (520)
..+|.|||+|..|.++|..|++.|+ +|+++|+.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4579999999999999999999999 99999997
No 350
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.98 E-value=0.18 Score=49.11 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.+|.|||||-.|..+|..|+..|+ +|+++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999874
No 351
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.93 E-value=0.17 Score=51.96 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 352
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.91 E-value=0.14 Score=49.26 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..+|.|||.|..|...|..|++.|++|++++|++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 353
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.69 E-value=0.17 Score=48.74 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||+|-.|...|..|++.|++|++++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 354
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.68 E-value=0.15 Score=50.55 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-.|+|+|+|.+|++++..|+..|.+|++++|++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 355
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.66 E-value=0.16 Score=49.41 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=29.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
...+|.|||+|-.|.+.|..|++.|.+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 3467999999999999999999999999999 76
No 356
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.65 E-value=0.13 Score=52.42 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||+|-.|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999874
No 357
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.58 E-value=0.16 Score=48.45 Aligned_cols=33 Identities=30% Similarity=0.481 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|..|...|..|++.|++|++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 469999999999999999999999999999985
No 358
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=91.57 E-value=0.18 Score=52.42 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~~ 88 (520)
.+|+|||+|-+|.-.+..|+++ +.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 3699999999999999999875 789999999753
No 359
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.52 E-value=0.2 Score=50.16 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999874
No 360
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.51 E-value=0.19 Score=48.71 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHhhC--CCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~ 87 (520)
+|.|||+|-.|.++|..|++. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999974
No 361
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.47 E-value=0.19 Score=46.72 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
....+|.|||+|-.|.++|..|++.|++|++++|++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 345689999999999999999999999999999975
No 362
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.40 E-value=0.22 Score=48.49 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..+|.|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999999 999999975
No 363
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.33 E-value=0.18 Score=50.63 Aligned_cols=34 Identities=32% Similarity=0.507 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999874
No 364
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.30 E-value=0.21 Score=52.78 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=42.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCCceeeeeec--cchHHHHHhcCch
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVGELLQ--PGGYLKLVELGLE 112 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~~~~g~~l~--~~~~~~l~~lGl~ 112 (520)
-.|+|+|+|..|..+|..|.+.|++|+++|++++.-.... ..+. +.-.+.|++.|+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~ 407 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGID 407 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCcc
Confidence 6799999999999999999999999999999875432221 2222 2233567777765
No 365
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.22 E-value=0.21 Score=48.49 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
..+|.|||+|-+|.++|+.|+..|. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999874
No 366
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.15 E-value=0.22 Score=48.09 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.+|.|||||-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 367
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.14 E-value=0.22 Score=45.33 Aligned_cols=34 Identities=32% Similarity=0.329 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|.|||+|-.|.+.|..|++.|++|.+++|+.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 368
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.12 E-value=0.17 Score=48.50 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|.|||+|..|...|..|++.|++|.+++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 369
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.01 E-value=0.19 Score=51.48 Aligned_cols=35 Identities=23% Similarity=0.420 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 45799999999999999999999999999999863
No 370
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.97 E-value=0.21 Score=48.58 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...+|.|||.|..|...|..|++.|++|++++|++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 34689999999999999999999999999999974
No 371
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.93 E-value=0.21 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.517 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
..+|.|||+|..|.++|..|+..|+ +++++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4579999999999999999999997 89999986
No 372
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.90 E-value=0.24 Score=46.68 Aligned_cols=34 Identities=38% Similarity=0.551 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999985
No 373
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.77 E-value=0.14 Score=49.43 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhC-----C-CeEEEEcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD-----G-RRVHVIER 85 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~-----G-~~V~v~Er 85 (520)
++|.|||+|..|.+.|..|++. | .+|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5799999999999999999999 9 99999987
No 374
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=90.76 E-value=0.24 Score=48.27 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4589999999999999999999998 799999875
No 375
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.74 E-value=0.29 Score=47.58 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..+|.|||+|..|.++|..|+..|+ ++.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4589999999999999999999988 999999975
No 376
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.70 E-value=0.18 Score=49.91 Aligned_cols=32 Identities=34% Similarity=0.497 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||+|..|.+.|..|++.|++|++++|+.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 377
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.70 E-value=0.17 Score=49.28 Aligned_cols=30 Identities=37% Similarity=0.522 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEcc
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIER 85 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er 85 (520)
+|.|||+|..|.+.|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 378
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.69 E-value=0.085 Score=48.62 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=30.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEcc
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIER 85 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er 85 (520)
...+|.|||+|..|.++|..|++.|++|+++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 346899999999999999999999999999988
No 379
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.64 E-value=0.2 Score=50.37 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999874
No 380
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.64 E-value=0.17 Score=48.32 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
....|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 34689999999999999999999998 899999884
No 381
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.56 E-value=0.21 Score=49.54 Aligned_cols=34 Identities=24% Similarity=0.505 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~ 86 (520)
.+.+|+|+|||.||..+|..|...|. +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 34689999999999999999999999 99999997
No 382
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.54 E-value=0.12 Score=47.66 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4579999999999999999999999 99999985
No 383
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.52 E-value=0.29 Score=47.30 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||+|..|...|..|++.|++|++++|+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 384
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.43 E-value=0.32 Score=46.86 Aligned_cols=34 Identities=35% Similarity=0.588 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||.|..|...|..|++.|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999874
No 385
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.38 E-value=0.32 Score=47.12 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
..+|.|||+|..|.+.|..|++.|+ +|++++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 999999874
No 386
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.36 E-value=0.27 Score=44.33 Aligned_cols=32 Identities=31% Similarity=0.410 Sum_probs=30.0
Q ss_pred cEEEEC-CCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVG-AGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVG-aG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|+|+| +|-.|...|..|++.|++|.+++|+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999874
No 387
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.32 E-value=0.3 Score=46.23 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|+|+|.+|.++|..|++.|.+|+|+.|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999999873
No 388
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.29 E-value=0.27 Score=47.74 Aligned_cols=34 Identities=24% Similarity=0.358 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC-CeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~ 87 (520)
..+|.|||.|..|.+.|..|++.| ++|++++|++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 357999999999999999999999 9999999985
No 389
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.22 E-value=0.28 Score=48.70 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999873
No 390
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.08 E-value=0.29 Score=50.44 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999984
No 391
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.01 E-value=0.23 Score=48.08 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~ 86 (520)
..+|.|||.|..|...|..|++.|+ +|++++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999997
No 392
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.95 E-value=0.27 Score=45.96 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4589999999999999999999998 789999874
No 393
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.87 E-value=0.31 Score=46.15 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|.|||+|..|.+.|..|.+.|++|++++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 394
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=89.85 E-value=0.25 Score=47.39 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
+|.|||+|..|.++|..|++.|. +++++|++.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 999999874
No 395
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.84 E-value=0.26 Score=48.75 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~ 86 (520)
.+..|+|+|||-+|..+|..|...|. +|+++||.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34689999999999999999999998 89999997
No 396
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.82 E-value=0.16 Score=46.49 Aligned_cols=33 Identities=30% Similarity=0.371 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEE-EccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHV-IERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v-~Er~~ 87 (520)
.+|.|||+|-.|.+.|..|++.|++|++ ++|++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 88874
No 397
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.81 E-value=0.24 Score=48.06 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
+|.|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 68999999999999999999999 999999873
No 398
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.74 E-value=0.34 Score=46.49 Aligned_cols=33 Identities=21% Similarity=0.453 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..|+|+|+|.+|.++|..|++.|. +|+|+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 999999873
No 399
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.72 E-value=0.19 Score=47.90 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||.|..|...|..|++.|++|++++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999985
No 400
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.64 E-value=0.33 Score=47.95 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...+|.|||.|..|...|..|++.|++|++++|++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999974
No 401
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.64 E-value=0.3 Score=46.21 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|.|||..|..++..|.++|++|+++.|+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999874
No 402
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.43 E-value=0.39 Score=47.43 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=32.3
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~ 91 (520)
.|+|+|||..|..+|..+++.|++|+++|.++..+.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~ 38 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQALI 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCChh
Confidence 599999999999999999999999999998865443
No 403
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.40 E-value=0.36 Score=48.10 Aligned_cols=34 Identities=35% Similarity=0.635 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4579999999999999999999999999999873
No 404
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.36 E-value=0.37 Score=49.89 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||+|..|..+|..|+++|++|++++|++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999985
No 405
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=89.28 E-value=0.3 Score=46.86 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 406
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.22 E-value=0.34 Score=49.90 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+.+|.|||+|..|.++|..|++.|++|++++|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34689999999999999999999999999999974
No 407
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.21 E-value=0.35 Score=44.35 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=31.6
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
....|+|.|| |..|..+|..|.++|++|+++.|+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3467999998 9999999999999999999999975
No 408
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.20 E-value=0.36 Score=46.31 Aligned_cols=33 Identities=27% Similarity=0.545 Sum_probs=30.8
Q ss_pred CcEEEEC-CCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVG-AGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVG-aG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.||| +|-.|.+.|..|++.|++|.+++|+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3699999 99999999999999999999999874
No 409
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.19 E-value=0.33 Score=45.37 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC----CeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG----RRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G----~~V~v~Er~~~ 88 (520)
.+|.|||+|-.|.+.|..|++.| .+|.+++|++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 57999999999999999999999 69999999864
No 410
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.10 E-value=0.33 Score=46.98 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
++|.|||+|..|.++|..|++.|+ +++++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 369999999999999999999987 899999975
No 411
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.03 E-value=0.4 Score=49.29 Aligned_cols=34 Identities=26% Similarity=0.467 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..+|.|||.|..|..+|..|+++|++|++++|++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999985
No 412
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.93 E-value=0.48 Score=44.76 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..|+|.|+|..|..++..|.+.|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999999854
No 413
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=88.92 E-value=0.35 Score=49.84 Aligned_cols=35 Identities=26% Similarity=0.509 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 45799999999999999999999999999999853
No 414
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.85 E-value=0.37 Score=46.86 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=31.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
....+|.|||+|..|.++|..|+..|+ ++.++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 344689999999999999999999988 89999985
No 415
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.83 E-value=0.41 Score=46.41 Aligned_cols=34 Identities=26% Similarity=0.530 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
..+|.|||+|..|.++|+.|+..|. ++.++|++.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3589999999999999999998886 899999873
No 416
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=88.83 E-value=0.33 Score=45.42 Aligned_cols=32 Identities=34% Similarity=0.509 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCC-CeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDG-RRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G-~~V~v~Er~~ 87 (520)
.|.|||+|-.|.+.|..|++.| .+|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999874
No 417
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.78 E-value=0.44 Score=44.51 Aligned_cols=32 Identities=34% Similarity=0.507 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
.|+|+|+|-+|.+++..|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999974
No 418
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=88.68 E-value=0.65 Score=48.17 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.++|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 46899999999999999999999999999999976
No 419
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.65 E-value=0.37 Score=45.95 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
+|.|||+|-.|...|..|++.|++|++++|+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999874
No 420
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=88.65 E-value=0.33 Score=47.81 Aligned_cols=34 Identities=26% Similarity=0.496 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 5689999999999999999999998 799999874
No 421
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.65 E-value=0.39 Score=49.10 Aligned_cols=34 Identities=32% Similarity=0.398 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.-.|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3569999999999999999999999999999873
No 422
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.63 E-value=0.42 Score=49.33 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|..|..+|..|++.|++|.+++|+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999975
No 423
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.59 E-value=0.31 Score=50.03 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~ 87 (520)
.+|.|||+|-.|+.+|..|++. |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 89999999874
No 424
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.56 E-value=0.34 Score=46.80 Aligned_cols=32 Identities=34% Similarity=0.480 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G--~~V~v~Er~~ 87 (520)
+|.|||+|-.|.++|..|++.| .+|++++++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6999999973
No 425
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=88.49 E-value=0.43 Score=46.34 Aligned_cols=34 Identities=26% Similarity=0.379 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC----CeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDG----RRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G----~~V~v~Er~~ 87 (520)
.++|.|||+|-.|.+.|..|.+.| .+|++++|+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 457999999999999999999999 7999999874
No 426
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.47 E-value=0.37 Score=45.74 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999999 899999985
No 427
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.46 E-value=0.34 Score=45.80 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|+|+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999973
No 428
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=88.45 E-value=0.3 Score=49.10 Aligned_cols=31 Identities=26% Similarity=0.406 Sum_probs=28.5
Q ss_pred CcEEEECCCHHHHHHHHHHhh-CCCeEEEEcc
Q 009994 55 TDVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~-~G~~V~v~Er 85 (520)
++|.|||+|..|.+.|..|++ .|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 479999999999999999998 5999999993
No 429
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=88.43 E-value=0.41 Score=46.55 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
...+|.|||+|..|.++|..|+..|+ ++.++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 34689999999999999999999998 899999863
No 430
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.42 E-value=0.31 Score=50.24 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~Er~~ 87 (520)
.+|.|||+|-.|+.+|..|++. |++|++++++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5799999999999999999998 79999999874
No 431
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.39 E-value=0.48 Score=42.62 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|+|.|| |..|..++..|.++|++|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999975
No 432
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.38 E-value=0.41 Score=46.44 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=30.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
...+|.|||||-+|.++|..|+..|. .+.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 89999986
No 433
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.37 E-value=0.23 Score=48.83 Aligned_cols=34 Identities=32% Similarity=0.457 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC-------CeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG-------RRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G-------~~V~v~Er~~~ 88 (520)
.+|.|||+|-.|.+.|..|++.| .+|++++|+..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999999753
No 434
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.36 E-value=0.4 Score=45.83 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|-.|...|..|++.|++|++++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999874
No 435
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.31 E-value=0.38 Score=46.72 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.-+|+|||+|..|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 357999999999999999999998 799999874
No 436
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.30 E-value=0.58 Score=44.47 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.8
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+ |-.|.+.|..|++.|++|++++|+.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999874
No 437
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.29 E-value=0.53 Score=44.71 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC---eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR---RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~---~V~v~Er~~ 87 (520)
..|.|||+|-.|.+.|..|.+.|+ +|++++|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999975
No 438
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.26 E-value=0.69 Score=50.20 Aligned_cols=34 Identities=26% Similarity=0.428 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
--.|.|||||..|...|..+++.|++|+++|.++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 3479999999999999999999999999999875
No 439
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.24 E-value=0.53 Score=44.77 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4579999999999999999999999 699999873
No 440
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.23 E-value=0.53 Score=46.08 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||.|..|.+.|..|++.|++|++++|++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 441
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.21 E-value=0.46 Score=44.95 Aligned_cols=32 Identities=28% Similarity=0.554 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
.|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 999999873
No 442
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.16 E-value=0.51 Score=51.26 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 443
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=88.13 E-value=0.46 Score=49.88 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4679999999999999999999998 799999885
No 444
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.10 E-value=0.52 Score=45.53 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999999 899999973
No 445
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.07 E-value=0.32 Score=48.40 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC-------CeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDG-------RRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G-------~~V~v~Er~~~ 88 (520)
.+|.|||+|-.|.+.|..|++.| .+|++++|+..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999999753
No 446
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.93 E-value=0.42 Score=45.37 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|.|||+|..|...|..|++ |++|++++|+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999874
No 447
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.91 E-value=0.51 Score=42.59 Aligned_cols=32 Identities=31% Similarity=0.563 Sum_probs=30.0
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|+|.|| |..|..++..|.++|++|+++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999974
No 448
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.87 E-value=0.57 Score=43.45 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC----eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR----RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~----~V~v~Er~~ 87 (520)
.+|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999974
No 449
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=87.82 E-value=0.4 Score=45.41 Aligned_cols=33 Identities=30% Similarity=0.508 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|+|||+|.+|.+.|..|.+.|.+|++++|+.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999999873
No 450
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.79 E-value=0.47 Score=48.88 Aligned_cols=33 Identities=42% Similarity=0.612 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|.|||+|..|...|..|++.|++|++++|+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 379999999999999999999999999999874
No 451
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.77 E-value=0.36 Score=46.30 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=27.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.+|-+||-|..|...|..|.+.|++|++++|+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4699999999999999999999999999999864
No 452
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=87.67 E-value=0.51 Score=49.48 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 4679999999999999999999998 799999874
No 453
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.64 E-value=0.41 Score=48.44 Aligned_cols=33 Identities=21% Similarity=0.357 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+.-|||.|-.|+.+|..|++.|++|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 568899999999999999999999999999985
No 454
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=87.54 E-value=0.51 Score=48.32 Aligned_cols=33 Identities=30% Similarity=0.360 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
...|+|||+|.+|...|..|.+.|.+|+|++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 357999999999999999999999999999975
No 455
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.48 E-value=0.59 Score=44.66 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|..+|..|...|.+|++++|..
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999874
No 456
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.47 E-value=0.63 Score=45.30 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=31.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
....+|.|||+|-.|.++|+.|+..|. ++.|+|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 345689999999999999999999997 89999986
No 457
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=87.40 E-value=0.6 Score=44.76 Aligned_cols=34 Identities=29% Similarity=0.444 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|.|||+|..|..+|..|...|.+|++++|..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999874
No 458
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.36 E-value=0.49 Score=45.12 Aligned_cols=31 Identities=35% Similarity=0.584 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
..|+|+|+|-+|.++|..|++.| +|+++.|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 46999999999999999999999 99999986
No 459
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.31 E-value=0.65 Score=43.86 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4579999999999999999999996 999999873
No 460
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.28 E-value=0.65 Score=45.44 Aligned_cols=33 Identities=36% Similarity=0.378 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|-.|.+.|..|++.|++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999874
No 461
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.26 E-value=0.48 Score=45.55 Aligned_cols=33 Identities=21% Similarity=0.428 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~~ 87 (520)
.+|.|||||..|...|..|+..|+ ++.|+|.+.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 579999999999999999999998 999999975
No 462
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.12 E-value=0.55 Score=44.63 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4579999999999999999999998 899999874
No 463
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.08 E-value=0.61 Score=43.49 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
++|.|||+|-.|...|..|.+.|.+|.+++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 464
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.04 E-value=0.58 Score=45.52 Aligned_cols=35 Identities=23% Similarity=0.398 Sum_probs=31.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
.++.+|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 445789999999999999999998886 89999985
No 465
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.98 E-value=0.68 Score=43.99 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|+|+|-+|.+.|..|++.|. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4579999999999999999999997 999999873
No 466
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.91 E-value=0.63 Score=47.82 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.+|.|||+|..|...|..|++.|++|.+++|+.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999874
No 467
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=86.87 E-value=0.94 Score=46.97 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 52 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..++|++|||+|++|+.+|..|++.|.+|+|+|+..
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 456999999999999999999999999999999975
No 468
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=86.84 E-value=0.7 Score=43.96 Aligned_cols=34 Identities=29% Similarity=0.530 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
++|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 36999999 99999999999999999999998753
No 469
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.84 E-value=0.63 Score=43.63 Aligned_cols=32 Identities=38% Similarity=0.538 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.|+|||+|-+|.+.|..|.+.|.+|++++|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 470
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=86.83 E-value=0.72 Score=40.84 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 55 ~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
..|+|.|| |..|..++..|.++|.+|+++.|+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 46999999 99999999999999999999999753
No 471
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.79 E-value=0.57 Score=48.21 Aligned_cols=34 Identities=35% Similarity=0.475 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
.-.|+|||+|..|..+|..|+..|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999874
No 472
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.78 E-value=0.57 Score=50.82 Aligned_cols=33 Identities=18% Similarity=0.401 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999985
No 473
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.76 E-value=0.69 Score=44.60 Aligned_cols=34 Identities=21% Similarity=0.420 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 4579999999999999999999998 899999973
No 474
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.67 E-value=0.61 Score=46.81 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4579999999999999999999999999999874
No 475
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.58 E-value=0.55 Score=44.02 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCe-EEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~-V~v~Er~~ 87 (520)
..|.|||+|-.|...|..|++.|++ |.+++|+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 89999874
No 476
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.54 E-value=0.56 Score=45.43 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
+.+|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4689999999999999999999886 89999985
No 477
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=86.16 E-value=0.67 Score=44.71 Aligned_cols=34 Identities=24% Similarity=0.426 Sum_probs=31.0
Q ss_pred CCCcEEEECCC-HHHHHHHHHHhhCCCeEEEEccC
Q 009994 53 SPTDVIIVGAG-VAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 53 ~~~dV~IVGaG-~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
....|+|||+| .+|..+|..|.+.|.+|++++|+
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 45689999999 67999999999999999999987
No 478
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.98 E-value=0.59 Score=43.71 Aligned_cols=30 Identities=27% Similarity=0.265 Sum_probs=28.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEcc
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIER 85 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~~V~v~Er 85 (520)
.|.|||+|-.|.+.|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999866
No 479
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.76 E-value=0.86 Score=45.33 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=33.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
....++|+|||..|.++|..++..|++|+|+|.++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 467899999999999999999999999999998764
No 480
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=85.69 E-value=0.65 Score=43.86 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
..|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999997 799999873
No 481
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.61 E-value=0.79 Score=44.54 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=31.0
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCCC
Q 009994 52 GSPTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (520)
Q Consensus 52 ~~~~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~~ 88 (520)
.....|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34467999999 99999999999999999999999864
No 482
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.59 E-value=0.78 Score=44.90 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-.|+|+|+|..|++++..++..|.+|+++++++
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999874
No 483
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.58 E-value=0.98 Score=43.66 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.0
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGa-G~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|+|.|| |..|..++..|.++|++|+++.|..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 457999998 9999999999999999999999964
No 484
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=85.52 E-value=0.72 Score=46.67 Aligned_cols=34 Identities=35% Similarity=0.634 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4689999999999999999999998 799999874
No 485
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=85.50 E-value=1.4 Score=43.75 Aligned_cols=37 Identities=27% Similarity=0.426 Sum_probs=32.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~ 90 (520)
...|+|+|+|..|..+|..+.+.|++|++++..+..+
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p 48 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP 48 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 4579999999999999999999999999999876543
No 486
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=85.48 E-value=0.6 Score=46.92 Aligned_cols=34 Identities=35% Similarity=0.508 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|..|..+|..|...|. +|++++|..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999998 899999873
No 487
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.47 E-value=1.3 Score=44.18 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~ 89 (520)
...|+|+|+|..|..+|..+.+.|++|++++..+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 347999999999999999999999999999987543
No 488
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=85.46 E-value=0.87 Score=44.55 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=29.8
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCC--eEEEEccC
Q 009994 54 PTDVIIVGA-GVAGAALAHTLGKDGR--RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGa-G~aGl~~A~~La~~G~--~V~v~Er~ 86 (520)
..+|.|||+ |-+|.++|+.|...|. +++++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 458999998 9999999999999985 89999986
No 489
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.33 E-value=0.71 Score=44.51 Aligned_cols=32 Identities=34% Similarity=0.397 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 56 DVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 56 dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
+|.|||||..|.++|+.|+..|+ .+.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999888 699999874
No 490
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.31 E-value=0.68 Score=45.44 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
...|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 4689999999999999999999999 899999874
No 491
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.10 E-value=0.82 Score=43.45 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=30.0
Q ss_pred CcEEEEC-CCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 55 TDVIIVG-AGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 55 ~dV~IVG-aG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
..|+|+| +|.+|.++|..|++.|.+|+++.|+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 4799999 8999999999999999999999986
No 492
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=84.93 E-value=0.74 Score=44.51 Aligned_cols=32 Identities=25% Similarity=0.374 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHhhCC--CeEEEEccCC
Q 009994 56 DVIIVGA-GVAGAALAHTLGKDG--RRVHVIERDV 87 (520)
Q Consensus 56 dV~IVGa-G~aGl~~A~~La~~G--~~V~v~Er~~ 87 (520)
+|+|||| |-+|.++|..|+..| .++.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 6999998 999999999999998 6899999874
No 493
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.09 E-value=1.1 Score=44.23 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=30.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~ 86 (520)
...|+|+|+|-.|..+|..|.+.|.+|++.|++
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 357999999999999999999999999999864
No 494
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.07 E-value=0.82 Score=45.35 Aligned_cols=33 Identities=33% Similarity=0.482 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~-~V~v~Er~~ 87 (520)
-.|+|+|+|+.|++++..++..|. +|+++++++
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS 228 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 469999999999999999999999 899999774
No 495
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.98 E-value=1.7 Score=44.28 Aligned_cols=39 Identities=28% Similarity=0.484 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCCCCCC
Q 009994 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (520)
Q Consensus 53 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~~~~~ 91 (520)
.++||+|||||++||++|+.|+++|.+|+|+|++.....
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 468999999999999999999999999999999975443
No 496
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=83.84 E-value=0.65 Score=44.19 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
..|.|||+|-.|...|..|++.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 64
No 497
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=83.79 E-value=0.84 Score=44.94 Aligned_cols=33 Identities=30% Similarity=0.253 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 55 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
-.|+|+|+|+.|+.++..++..|.+|+.+++++
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 369999999999999999988999999999874
No 498
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=83.76 E-value=0.84 Score=45.30 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=32.3
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhhCCC---eEEEEccCC
Q 009994 53 SPTDVIIVGA-GVAGAALAHTLGKDGR---RVHVIERDV 87 (520)
Q Consensus 53 ~~~dV~IVGa-G~aGl~~A~~La~~G~---~V~v~Er~~ 87 (520)
....|+|+|| |.+|+.++-.+...|. +|+++|++.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4678999999 9999999999999998 999999874
No 499
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.68 E-value=0.81 Score=44.52 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=29.6
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCC-------eEEEEccC
Q 009994 54 PTDVIIVGA-GVAGAALAHTLGKDGR-------RVHVIERD 86 (520)
Q Consensus 54 ~~dV~IVGa-G~aGl~~A~~La~~G~-------~V~v~Er~ 86 (520)
..+|+|+|| |..|.+++..|...|. .+.++|+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 468999998 9999999999999886 79999876
No 500
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.63 E-value=1.4 Score=42.88 Aligned_cols=34 Identities=24% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEccCC
Q 009994 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (520)
Q Consensus 54 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~Er~~ 87 (520)
...|.|||.|-.|...|..|+..|.+|+++++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 4579999999999999999999999999999975
Done!