Query 009999
Match_columns 520
No_of_seqs 249 out of 2254
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 17:39:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iek_A Ribonuclease TTHA0252; 100.0 1E-64 3.4E-69 534.7 39.5 383 1-513 1-402 (431)
2 2i7t_A Cleavage and polyadenyl 100.0 1.5E-58 5.3E-63 492.2 36.7 390 1-515 12-422 (459)
3 3af5_A Putative uncharacterize 100.0 4.5E-52 1.5E-56 458.8 38.6 398 1-514 189-621 (651)
4 2xr1_A Cleavage and polyadenyl 100.0 1.4E-51 4.8E-56 453.6 37.6 395 1-514 184-610 (640)
5 2ycb_A Beta-CAsp RNAse, cleava 100.0 4.5E-51 1.5E-55 450.0 37.0 396 1-514 180-606 (636)
6 2i7x_A Protein CFT2; polyadeny 100.0 3.9E-45 1.3E-49 405.1 32.1 339 1-464 1-371 (717)
7 3zq4_A Ribonuclease J 1, RNAse 100.0 1.5E-37 5.1E-42 336.2 23.2 354 1-515 9-394 (555)
8 3bk2_A RNAse J, metal dependen 100.0 2.3E-35 7.9E-40 320.4 27.2 357 1-515 17-409 (562)
9 2az4_A Hypothetical protein EF 100.0 8.8E-31 3E-35 276.1 22.7 387 1-517 7-410 (429)
10 4b87_A DNA cross-LINK repair 1 99.9 2.6E-26 9.1E-31 235.9 17.1 283 92-512 49-344 (367)
11 3zdk_A 5' exonuclease apollo; 99.9 1.4E-24 4.9E-29 220.2 19.1 176 92-366 22-206 (336)
12 1y44_A Ribonuclease Z; zinc-de 99.8 1.2E-18 3.9E-23 176.1 11.7 174 1-293 1-238 (320)
13 2cbn_A Ribonuclease Z; phospho 99.8 1.8E-18 6.2E-23 173.3 11.8 173 1-292 2-239 (306)
14 3zwf_A Zinc phosphodiesterase 99.7 1.5E-17 5.1E-22 171.2 12.9 90 1-136 1-105 (368)
15 1zkp_A Hypothetical protein BA 99.7 1.6E-17 5.4E-22 163.4 12.0 159 1-271 25-198 (268)
16 3g1p_A Protein PHNP; C-P lyase 99.7 1.5E-17 5.1E-22 162.9 8.9 158 1-271 3-186 (258)
17 3jxp_A Coenzyme PQQ synthesis 99.6 1.7E-16 5.6E-21 160.3 6.6 176 1-272 3-222 (321)
18 3md7_A Beta-lactamase-like; ss 99.6 4.4E-16 1.5E-20 155.3 9.4 125 91-272 96-230 (293)
19 2e7y_A TRNAse Z; tRNA maturati 99.6 4.4E-16 1.5E-20 153.7 8.0 159 1-271 1-207 (280)
20 3kl7_A Putative metal-dependen 99.5 6.8E-13 2.3E-17 127.9 17.2 139 1-272 30-181 (235)
21 2r2d_A AGR_PTI_140P, Zn-depend 99.4 7.3E-12 2.5E-16 123.1 14.6 111 89-251 98-216 (276)
22 1ztc_A Hypothetical protein TM 99.3 1.1E-12 3.8E-17 125.0 5.2 153 1-250 13-176 (221)
23 3rpc_A Possible metal-dependen 99.3 1.5E-11 5.3E-16 120.4 13.1 164 1-272 5-190 (264)
24 3m8t_A 'BLR6230 protein; subcl 99.3 9.2E-12 3.2E-16 123.4 10.5 151 3-250 47-204 (294)
25 2wyl_A L-ascorbate-6-phosphate 99.3 5.9E-11 2E-15 121.6 16.4 117 92-272 107-248 (360)
26 3dha_A N-acyl homoserine lacto 99.3 2.9E-12 9.9E-17 124.5 5.1 101 89-251 95-198 (254)
27 3bv6_A Metal-dependent hydrola 99.2 5.6E-11 1.9E-15 122.6 14.5 117 92-272 131-273 (379)
28 2xf4_A Hydroxyacylglutathione 99.2 4.5E-12 1.5E-16 119.5 5.6 148 1-250 1-153 (210)
29 1k07_A FEZ-1 beta-lactamase; m 99.2 1.4E-11 4.6E-16 120.5 9.2 147 14-251 24-177 (263)
30 3esh_A Protein similar to meta 99.2 1.4E-11 4.8E-16 121.6 7.7 160 14-251 47-209 (280)
31 2zwr_A Metallo-beta-lactamase 99.2 1.9E-11 6.5E-16 115.1 6.5 144 1-250 1-146 (207)
32 3aj3_A MLR6805 protein, 4-pyri 99.1 4.2E-11 1.4E-15 117.6 6.8 169 15-251 35-210 (274)
33 3l6n_A Metallo-beta-lactamase; 99.1 7.4E-11 2.5E-15 111.7 7.8 128 13-250 29-160 (219)
34 3adr_A Putative uncharacterize 99.1 5.1E-10 1.8E-14 108.8 13.8 158 2-250 5-167 (261)
35 4efz_A Metallo-beta-lactamase 99.1 8.4E-10 2.9E-14 109.9 12.7 161 1-250 5-176 (298)
36 1sml_A Protein (penicillinase) 99.0 1.7E-10 6E-15 112.9 6.7 143 14-249 37-185 (269)
37 1vjn_A Zn-dependent hydrolase 99.0 7.8E-10 2.7E-14 105.3 10.8 59 210-272 80-145 (220)
38 1p9e_A Methyl parathion hydrol 99.0 9E-10 3.1E-14 111.5 11.6 155 15-251 97-258 (331)
39 2bib_A CBPE, teichoic acid pho 99.0 5E-10 1.7E-14 121.1 8.2 196 1-271 6-226 (547)
40 1m2x_A Class B carbapenemase B 99.0 7.2E-10 2.5E-14 105.4 7.4 128 13-250 25-156 (223)
41 2vw8_A PA1000, PQSE; quinolone 99.0 3.3E-09 1.1E-13 105.7 11.9 155 14-250 23-182 (303)
42 1e5d_A Rubredoxin\:oxygen oxid 98.9 4.9E-10 1.7E-14 116.2 5.9 96 91-250 68-167 (402)
43 4ax1_B Metallo-beta-lactamase 98.9 1.2E-09 4E-14 108.5 8.2 135 13-237 56-193 (303)
44 2zo4_A Metallo-beta-lactamase 98.9 1.9E-09 6.5E-14 108.0 9.0 167 14-251 21-193 (317)
45 3tp9_A Beta-lactamase and rhod 98.9 3.2E-10 1.1E-14 120.5 2.9 138 1-250 4-151 (474)
46 4hl2_A Beta-lactamase NDM-1; s 98.9 1.1E-10 3.7E-15 112.6 -0.8 138 12-251 45-184 (243)
47 2gcu_A Putative hydroxyacylglu 98.9 1.6E-09 5.6E-14 104.8 7.0 130 1-250 3-144 (245)
48 2p18_A Glyoxalase II; metallop 98.9 1.7E-09 5.8E-14 108.4 7.3 88 93-250 83-182 (311)
49 2ohh_A Type A flavoprotein FPR 98.9 2E-09 6.8E-14 111.6 6.7 97 91-250 72-172 (404)
50 1a7t_A Metallo-beta-lactamase; 98.8 1.7E-09 5.8E-14 103.5 5.4 128 14-251 36-167 (232)
51 1mqo_A Beta-lactamase II; alph 98.8 5.8E-09 2E-13 99.3 8.7 127 14-250 40-170 (227)
52 3iog_A Beta-lactamase; hydrola 98.8 4.3E-09 1.5E-13 99.9 7.3 88 4-137 13-102 (227)
53 2fhx_A SPM-1; metallo-beta-lac 98.8 9.1E-09 3.1E-13 99.0 9.1 116 92-250 67-186 (246)
54 1qh5_A Glyoxalase II, protein 98.8 2.9E-09 9.8E-14 104.0 5.5 128 1-250 1-136 (260)
55 3q6v_A Beta-lactamase; metallo 98.8 8.4E-09 2.9E-13 98.3 8.5 88 3-136 15-104 (233)
56 2qed_A Hydroxyacylglutathione 98.8 3.4E-09 1.2E-13 103.4 5.5 125 1-250 8-136 (258)
57 1ycg_A Nitric oxide reductase; 98.8 3.8E-09 1.3E-13 109.2 5.1 96 91-250 69-168 (398)
58 3hnn_A Putative diflavin flavo 98.8 2.8E-09 9.7E-14 104.0 3.8 96 91-249 76-175 (262)
59 2p97_A Hypothetical protein; p 98.8 1.7E-09 5.8E-14 101.3 2.0 118 13-250 22-139 (201)
60 4dik_A Flavoprotein; TM0755, e 98.8 9.7E-09 3.3E-13 106.6 7.6 94 90-250 85-182 (410)
61 4ad9_A Lactb2, beta-lactamase- 98.7 8.9E-10 3E-14 109.1 -0.7 132 14-250 31-167 (289)
62 3r2u_A Metallo-beta-lactamase 98.7 6.7E-09 2.3E-13 110.0 5.8 138 1-251 25-172 (466)
63 1xm8_A Glyoxalase II; structur 98.7 4.1E-09 1.4E-13 102.5 3.4 85 94-250 46-133 (254)
64 2q9u_A A-type flavoprotein; fl 98.6 2.7E-08 9.1E-13 103.6 6.0 96 91-250 74-173 (414)
65 2y8b_A Metallo-B-lactamase; hy 98.6 2.4E-08 8.3E-13 97.5 4.9 132 13-250 66-199 (265)
66 1jjt_A IMP-1 metallo beta-lact 98.5 3E-08 1E-12 94.5 2.9 73 13-131 31-105 (228)
67 2p4z_A Metal-dependent hydrola 98.2 1E-06 3.5E-11 86.9 6.0 71 14-129 32-104 (284)
68 4eyb_A Beta-lactamase NDM-1; m 98.1 2.2E-07 7.7E-12 90.9 -0.7 75 12-131 72-148 (270)
69 2cfu_A SDSA1; SDS-hydrolase, l 97.9 2E-05 6.8E-10 86.7 9.3 78 14-132 122-204 (658)
70 2yhe_A SEC-alkyl sulfatase; hy 96.8 8.4E-06 2.9E-10 89.4 0.0 75 15-130 133-212 (668)
71 3h3e_A Uncharacterized protein 97.3 9.7E-05 3.3E-09 71.8 2.6 29 96-129 63-93 (267)
72 2i7x_A Protein CFT2; polyadeny 30.1 43 0.0015 36.6 4.8 39 473-513 649-687 (717)
73 1ej0_A FTSJ; methyltransferase 24.1 64 0.0022 27.0 4.0 38 316-353 116-153 (180)
74 3dou_A Ribosomal RNA large sub 23.1 92 0.0031 27.4 4.9 36 316-351 119-154 (191)
No 1
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=100.00 E-value=1e-64 Score=534.73 Aligned_cols=383 Identities=19% Similarity=0.186 Sum_probs=320.5
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++|||+ +++|+||++|+.++.+||+|||+...... . ..+
T Consensus 1 M~i~~LG~~-~~vg~s~~li~~~~~~iLID~G~~~~~~~---------~----------------------~~~------ 42 (431)
T 3iek_A 1 MRIVPFGAA-REVTGSAHLLLAGGRRVLLDCGMFQGKEE---------A----------------------RNH------ 42 (431)
T ss_dssp CEEEECSCS-SSSSCCCEEEEETTEEEEECCCCCCGGGG---------G----------------------GGG------
T ss_pred CEEEEeCCC-CCCCCcEEEEEECCeEEEEeCCCCcchhh---------c----------------------cch------
Confidence 999999999 78999999999999999999999532100 0 000
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
....+++.+||+|||||+ ||+||||+|.+ .++++|||+|++|.++++.++.+..++++
T Consensus 43 -----~~~~~~~~~Id~VllTH~H~DH~gglp~l~~-~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~-------------- 102 (431)
T 3iek_A 43 -----APFGFDPKEVDAVLLTHAHLDHVGRLPKLFR-EGYRGPVYATRATVLLMEIVLEDALKVMD-------------- 102 (431)
T ss_dssp -----SCCSSCGGGCCEEECSCCCHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHCS--------------
T ss_pred -----hhcCCCcccCCEEEECCCChHHhccHHHHHH-cCCCCeEEEcHHHHHHHHHHHHHHHhhcc--------------
Confidence 112346778999999999 99999999998 67899999999999999998888754421
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeC
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA 238 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~ 238 (520)
.+.|. .+|+..++.+++.+++++++++ ++++|+++++||++||++|.|+.+
T Consensus 103 --------------------------~~~y~--~~~~~~~~~~~~~l~~~~~~~l-~g~~v~~~~agH~~Gs~~~~i~~~ 153 (431)
T 3iek_A 103 --------------------------EPFFG--PEDVEEALGHLRPLEYGEWLRL-GALSLAFGQAGHLPGSAFVVAQGE 153 (431)
T ss_dssp --------------------------SCSSC--HHHHHHHHHTEEECCTTCCEEE-TTEEEEEEECCSSTTCEEEEEEET
T ss_pred --------------------------cCCCC--HHHHHHHHhccEEcCCCCeEEe-CCEEEEEEeCCCCcCceEEEEEEC
Confidence 00111 6888888899999999999999 689999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCccccccCCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHHHHHHHHHH
Q 009999 239 KGNIAYISGSNFASGHAMDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFI 318 (520)
Q Consensus 239 ~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~e~~~l~~l 318 (520)
+++|+| |||++........++..+.++|+||+ |+||+++.|. +++ ++.++|
T Consensus 154 ~~~ilf-sGD~~~~~~~~l~~~~~~~~~D~LI~--------------EsTy~~~~h~---------~~~-----~~~~~l 204 (431)
T 3iek_A 154 GRTLVY-SGDLGNREKDVLPDPSLPPLADLVLA--------------EGTYGDRPHR---------PYR-----ETVREF 204 (431)
T ss_dssp TEEEEE-CCCCCCTTSSSSCCCCBCCCCSEEEE--------------ECTTTTCCCC---------CHH-----HHHHHH
T ss_pred CEEEEE-eCCCCCCCCcccCCccccCCccEEEE--------------EcccCCcCCC---------ChH-----HHHHHH
Confidence 999999 99998755444334556789999999 9999998874 222 223567
Q ss_pred HHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEcchHHHHHHHHHHhHHHHHHHHHhhhccCCCC
Q 009999 319 CSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPL 397 (520)
Q Consensus 319 ~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~~l-~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~~~~~~~p 397 (520)
++.|.+++++||+||||+|++||+|||+.+|.++|++ + ++|||++||||.+++++|+.+.|||++..++.+..+++|
T Consensus 205 ~~~i~~~~~~gg~vlIp~fa~gR~qell~~l~~~~~~--~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p 282 (431)
T 3iek_A 205 LEILEKTLSQGGKVLIPTFAVERAQEILYVLYTHGHR--LPRAPIYLDSPMAGRVLSLYPRLVRYFSEEVQAHFLQGKNP 282 (431)
T ss_dssp HHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHGGG--SCCCCEEEECHHHHHHHHHGGGGGGGSCHHHHHHHHTTSCT
T ss_pred HHHHHHHHHcCCeEEEEeccchHHHHHHHHHHHHHHh--ccCCCEEEeChHHHHHHHHHHHhHHHHHHHHHHHHhcCCCC
Confidence 8899999999999999999999999999999999987 5 799999999999999999999999999999888888889
Q ss_pred C--cceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcchhhc-------
Q 009999 398 F--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA------- 468 (520)
Q Consensus 398 f--~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~~~~~------- 468 (520)
| ++.+++++ .++++.+...++||||||++|||++|+++++|+.|++|++|+||||||+.+.+.
T Consensus 283 f~~~~~~~~~~--------~~~~~~~~~~~~p~viia~~gm~~~G~~~~~l~~~~~~~~n~ii~~gyq~~gt~g~~l~~~ 354 (431)
T 3iek_A 283 FRPAGLEVVEH--------TEASKALNRAPGPMVVLAGSGMLAGGRILHHLKHGLSDPRNALVFVGYQPQGGLGAEIIAR 354 (431)
T ss_dssp TCCTTEEECCS--------HHHHHHHHHSCSSEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHHTC
T ss_pred CCCCCeEEeCC--------HHHHHHHhcCCCCeEEEecCCCCCCChHHHHHHHhcCCCCCeEEEECCCCCCChHHHhhcC
Confidence 8 55555443 434444556789999999999999999999999999999999999998865432
Q ss_pred ------cCCCceeeeEEEEe-cccCCCCHHHHHHhhhhcCCCCceeEeeecc
Q 009999 469 ------VLPFKPISMKASES-STLTKDTATEVSSVSRGMEDSCQFFRCYFIL 513 (520)
Q Consensus 469 ------~~~~~~v~~~v~~~-~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~ 513 (520)
.+...+|+|+|+++ .||+|||++||++|++.++ .|+.+||.
T Consensus 355 ~~~v~~~g~~~~v~a~v~~~~~~saHad~~~l~~~~~~~~----~v~lvHge 402 (431)
T 3iek_A 355 PPAVRILGEEVPLRASVHTLGGFSGHAGQDELLDWLQGEP----RVVLVHGE 402 (431)
T ss_dssp CSEEEETTEEEECCSEEEECGGGCSSCCHHHHHHHHTTCS----EEEEESSC
T ss_pred CcEEEECCEEEEEEEEEEEECCccccCCHHHHHHHHHhCC----eEEEECCC
Confidence 23456899999999 6999999999999999874 57889986
No 2
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=100.00 E-value=1.5e-58 Score=492.24 Aligned_cols=390 Identities=19% Similarity=0.235 Sum_probs=280.0
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++||++ +++|+||++|+.++.+||+|||+.... .+. ...|+
T Consensus 12 m~i~~LG~~-~~vg~s~~li~~~~~~iLID~G~~~~~--------~~~---------------------------~~~~~ 55 (459)
T 2i7t_A 12 LLIRPLGAG-QEVGRSCIILEFKGRKIMLDCGIHPGL--------EGM---------------------------DALPY 55 (459)
T ss_dssp EEEEEEESS-SSSSSCEEEEEETTEEEEECCCCCTTS--------CGG---------------------------GGSCC
T ss_pred EEEEEEecC-CCCCCCEEEEEECCeEEEEeCCCCcCc--------ccc---------------------------cccCc
Confidence 799999998 789999999999999999999997331 000 01111
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
. ..+++.+||+|||||+ ||+||||+|....+|++|||+|++|.++.+.++.+..++++..
T Consensus 56 l------~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~iy~t~~t~~l~~~~l~d~~~~~~~~------------ 117 (459)
T 2i7t_A 56 I------DLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNIS------------ 117 (459)
T ss_dssp G------GGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEEEEEHHHHHHHHHHHHHHCC-----------------
T ss_pred c------cccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCEEechHHHHHHHHHHHHHHHHhccc------------
Confidence 1 1235678999999999 9999999998767888999999999999888877754332200
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeC
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA 238 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~ 238 (520)
. ....|. .+++..+..+++.+++++++++ ++++|+++++||++|+++|.|+.+
T Consensus 118 -----------------------~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~gi~v~~~~~GH~~Gs~~~~i~~~ 170 (459)
T 2i7t_A 118 -----------------------A-DDMLYT--ETDLEESMDKIETINFHEVKEV-AGIKFWCYHAGHVLGAAMFMIEIA 170 (459)
T ss_dssp ----------------------------CCC--HHHHHHHGGGEEEECTTCCEEE-TTEEEEEEECCSSTTCEEEEEEET
T ss_pred -----------------------c-cccccC--HHHHHHHHhccEEeCCCCEEEE-CCEEEEEEeCCCccCcEEEEEEEC
Confidence 0 000111 5677777778999999999999 589999999999999999999999
Q ss_pred CeEEEEecCCCCCCCCCCccccc-cCCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHHHHHHHHH
Q 009999 239 KGNIAYISGSNFASGHAMDFDYR-AIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAF 317 (520)
Q Consensus 239 ~~~i~Y~sgD~~~~~~~~~~~~~-~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~e~~~l~~ 317 (520)
+++|+| |||+............ ...++|+||+ |+||++..|. .++ ++.++
T Consensus 171 ~~~il~-sGD~~~~~~~~~~~~~~~~~~~D~Li~--------------Esty~~~~~~---------~~~-----~~~~~ 221 (459)
T 2i7t_A 171 GVKLLY-TGDFSRQEDRHLMAAEIPNIKPDILII--------------ESTYGTHIHE---------KRE-----EREAR 221 (459)
T ss_dssp TEEEEE-CCSCCCC-----CCCCCCSSCCSEEEE--------------ECTTTTCCCC---------CHH-----HHHHH
T ss_pred CcEEEE-eCCCCCCCCcccCCCCcCCCCCeEEEE--------------CCCCCCCCCC---------ChH-----HHHHH
Confidence 999999 9999764432211111 1358999999 8999988764 222 22345
Q ss_pred HHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhC-CC-ceeEEEEcchHHHHHHHHHHhHHHHHHHHHhhhccCC
Q 009999 318 ICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECS-SL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGD 395 (520)
Q Consensus 318 l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~-~l-~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~~~~~~ 395 (520)
|++.|.+++++||+|+||+|++||+|||+.+|+.+|++. .+ .+|||++|+||.+++++|+.+.+||++..++.+. ..
T Consensus 222 l~~~i~~~~~~~g~vlip~fa~gr~qell~~l~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~-~~ 300 (459)
T 2i7t_A 222 FCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQIN-IN 300 (459)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSSHHHHHHHHHHHHHHCGGGTTSCEEEC------------------------------
T ss_pred HHHHHHHHHHCCCEEEEEecchhHHHHHHHHHHHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhc-cc
Confidence 788999999999999999999999999999999999886 34 6999999999999999999999999998776553 46
Q ss_pred CCC--cceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcchhh------
Q 009999 396 PLF--AHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL------ 467 (520)
Q Consensus 396 ~pf--~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~~~~------ 467 (520)
+|| ++++.+++ .+ .. ...+||||||++|||++|+++++|+.|++|++|+|||+||+....
T Consensus 301 ~p~~~~~~~~~~~--------~~---~~-~~~~~~viia~~gm~~~g~~~~~l~~~~~~~~~~ii~~gy~~~gt~g~~l~ 368 (459)
T 2i7t_A 301 NPFVFKHISNLKS--------MD---HF-DDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIM 368 (459)
T ss_dssp ----CCSEEECCC--------TT---SS-CCCSSEEEEESCTTCSSHHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHT
T ss_pred CCcCCCcceeeCC--------HH---Hh-cCCCCeEEEEcCcccCCCHHHHHHHHHcCCCCCeEEEEecCCCCChHHHHh
Confidence 776 44444322 21 11 246899999999999999999999999999999999999875432
Q ss_pred --------ccCCCceeeeEEEEecccCCCCHHHHHHhhhhcCCCCceeEeeecccc
Q 009999 468 --------AVLPFKPISMKASESSTLTKDTATEVSSVSRGMEDSCQFFRCYFILSL 515 (520)
Q Consensus 468 --------~~~~~~~v~~~v~~~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~~ 515 (520)
..+...+++|+|+.++||+|||+.+|++||+.++|+ .|+++||...
T Consensus 369 ~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~--~v~~vHGe~~ 422 (459)
T 2i7t_A 369 SEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPP--HVILVHGEQN 422 (459)
T ss_dssp TCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCS--EEEEESSCHH
T ss_pred hCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCC--eEEEeCCCHH
Confidence 123456789999999999999999999999999998 6799998643
No 3
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=100.00 E-value=4.5e-52 Score=458.76 Aligned_cols=398 Identities=17% Similarity=0.213 Sum_probs=307.4
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++||++ +++|+||++|+.++.+||+|||....... .+. ...|.
T Consensus 189 m~i~~LG~~-~~vg~s~~LI~~~~~~ILID~G~~~~~~~------~g~---------------------------~~l~~ 234 (651)
T 3af5_A 189 IRITGLGGF-REVGRSALLVQTDESFVLVDFGVNVAMLN------DPY---------------------------KAFPH 234 (651)
T ss_dssp EEEEEEECS-SSSSCCEEEEEESSCEEEECCCCCGGGTT------CHH---------------------------HHSCC
T ss_pred eEEEEEecC-CCCCCcEEEEEECCcEEEEeCCCChhccc------cch---------------------------hhccc
Confidence 789999998 78999999999999999999999843200 000 00111
Q ss_pred cccccccccc--cC--CcccEEEecCC--CCCCchhhhhcccC-CceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 009999 81 YKTVNNLHLW--NV--SFIDVVLISSP--MGMLGLPFLTRMEG-FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAE 153 (520)
Q Consensus 81 ~~~~~~~~~~--~~--~~id~IlISH~--DH~g~LP~L~~~~~-~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~ 153 (520)
+. ...+ +. .+||+|||||+ ||+||||+|.+ .+ |++|||+|.+|.++.+.++.++.++++..
T Consensus 235 l~----~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~-~~~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~------- 302 (651)
T 3af5_A 235 FD----APEFQYVLREGLLDAIIITHAHLDHCGMLPYLFR-YNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSN------- 302 (651)
T ss_dssp TT----CHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHH-TTCCCSCEEECHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred cc----chhhccCcccCCCCEEEECCCChHhhcCHHHHHh-cCCCCceEEEcHHHHHHHHHHHHHHHHHhhhc-------
Confidence 10 0002 45 78999999999 99999999987 45 78999999999999988888876554310
Q ss_pred CCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCch-HHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEE
Q 009999 154 ESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPC-IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACN 232 (520)
Q Consensus 154 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~ 232 (520)
+ ...++ .+++..+..+++.+++++.+++.++++|+++++||++|+++
T Consensus 303 ----------------------------~----~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~ 350 (651)
T 3af5_A 303 ----------------------------G----QDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHILGSAI 350 (651)
T ss_dssp ----------------------------T----CCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEE
T ss_pred ----------------------------c----cCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCcCcEE
Confidence 0 00122 56777776788999999999994589999999999999999
Q ss_pred EEEEeCCe--EEEEecCCCCCCCCCCcccc-ccCCCCCEEEEcCCCCCCCcccCCCCccccCCC--chhHhhhccCCCch
Q 009999 233 WIISGAKG--NIAYISGSNFASGHAMDFDY-RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNN--NWEELMNSLSNYDE 307 (520)
Q Consensus 233 ~~I~~~~~--~i~Y~sgD~~~~~~~~~~~~-~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~--~~~~~~~~~~~~~~ 307 (520)
|.|+.+++ +|+| |||++.......... ....++|+||+ |+||+++. |. ++.
T Consensus 351 ~~i~~~~~~~~ilf-tGD~~~~~~~ll~~~~~~~~~~DvLI~--------------EsT~~~~~~~h~---------s~~ 406 (651)
T 3af5_A 351 VHLHIGNGLHNIAI-TGDFKFIPTRLLEPANAKFPRLETLVM--------------ESTYGGANDIQM---------PRE 406 (651)
T ss_dssp EEEEETTTTTCEEE-CCSCCCSCCSSCCCCCCBCSSCSEEEE--------------ECTTCSTTCCCC---------CHH
T ss_pred EEEEECCCceEEEE-eCCCCCCcccccccccccCCCCCEEEE--------------CCCCCCCCCCCC---------CHH
Confidence 99998887 9999 999976543221111 13568999999 89999876 53 222
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCCceeEEEEcchHHHHHHHHHHhHHHHHHHH
Q 009999 308 SVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQR 387 (520)
Q Consensus 308 ~~~e~~~l~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~~l~~pI~~~s~~a~~~~~~~~~~~e~l~~~~ 387 (520)
+ ..++|++.|.+++++||+||||+|++||+|||+.+|..+++++++.+|||++| ++.+++++|..+.+||+...
T Consensus 407 ~-----~~~~l~~~i~~~l~~~g~vlIp~favgR~qell~~l~~~~~~~~l~~~I~~dg-~a~~~~~~~~~~~~~l~~~~ 480 (651)
T 3af5_A 407 E-----AEKRLIEVIHNTIKRGGKVLIPAMAVGRAQEVMMVLEEYARIGGIEVPIYLDG-MIWEATAIHTAYPEYLSRRL 480 (651)
T ss_dssp H-----HHHHHHHHHHHHHHTTCEEEEECCTTTHHHHHHHHHHHHHTTTCCCSCEEEES-SHHHHHHHHHTCGGGSCHHH
T ss_pred H-----HHHHHHHHHHHHHhCCCEEEEeccCccHHHHHHHHHHHhhhhcCCCCcEEEec-hHHHHHHHHHHhHHhcCHHH
Confidence 2 22457788999999999999999999999999999999998877779999996 99999999999999999987
Q ss_pred Hhhhc-cCCCCCc--ceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcc
Q 009999 388 QEKLF-SGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVD 464 (520)
Q Consensus 388 ~~~~~-~~~~pf~--~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~ 464 (520)
++.++ ...+||. ++..+++ ..+.+......+|+||||++|||++|+++++|++|+.|++|+|||+||..
T Consensus 481 ~~~~~~~~~~~f~~~~~~~v~~--------~~~~~~~~~~~~~~vIia~~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~ 552 (651)
T 3af5_A 481 REQIFKEGYNPFLSEIFHPVAN--------SRERQDIIDSNEPAIIIASSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQA 552 (651)
T ss_dssp HHHTTTSSCCSTTCTTEEECCS--------HHHHHHHHHSCSCEEEEESCTTSSSSHHHHHHHHHTTCTTCEEEECSCCC
T ss_pred HHHHHhccCCCccCCceEEcCC--------HHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 76553 5577883 3333321 11111112337899999999999999999999999999999999999876
Q ss_pred hhhc----------------cCC--CceeeeEEEEec-ccCCCCHHHHHHhhhhcCCCCceeEeeeccc
Q 009999 465 AELA----------------VLP--FKPISMKASESS-TLTKDTATEVSSVSRGMEDSCQFFRCYFILS 514 (520)
Q Consensus 465 ~~~~----------------~~~--~~~v~~~v~~~~-~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~ 514 (520)
+... .+. ..+++|+|..+. ||+|||++||.+|++.++|+..+|+.+||..
T Consensus 553 ~gt~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~ 621 (651)
T 3af5_A 553 EGTLGRQVQSGIREIPMVGEEGRTEVIKVNMEVHTIDGFSGHADRRELMNYVAKVRPRPERIITVHGEP 621 (651)
T ss_dssp TTCHHHHHHHTCSEEEEECGGGCEEEEECCSEEEECGGGCSSCCHHHHHHHHHHCBSCCSEEEEESSCH
T ss_pred CCcHHHHHHhccceeeehhcCCCceEEEeEEEEEEcCcccCcCCHHHHHHHHHHhhcCCCEEEEEcCCH
Confidence 5330 023 345789999998 9999999999999999993333889999864
No 4
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=100.00 E-value=1.4e-51 Score=453.63 Aligned_cols=395 Identities=14% Similarity=0.202 Sum_probs=294.5
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++||++ +++|+||++|+.++.+||+|||..... + . ...|.
T Consensus 184 m~I~~LG~~-~evg~s~~LI~~~~~~ILID~G~~~~~---------~-~--------------------------~~l~~ 226 (640)
T 2xr1_A 184 VRVTALGGC-KEVGRSCFLLSTPESRILIDCGVNVGS---------D-E--------------------------NMTPY 226 (640)
T ss_dssp CEEEEEECS-SSSBCCEEEEECSSCEEEECCCCBCSS---------C-S--------------------------SCCCC
T ss_pred eEEEEEecC-CCCCCcEEEEEECCeEEEEeCCCCccc---------c-c--------------------------ccccc
Confidence 789999998 789999999999999999999988331 0 0 00111
Q ss_pred cccccccccc-cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 009999 81 YKTVNNLHLW-NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (520)
Q Consensus 81 ~~~~~~~~~~-~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~ 157 (520)
+. .... +..+||+|||||+ ||+||||+|.+ .++++|||+|++|.++.+.++.+++++.+..
T Consensus 227 l~----~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~-~~~~~~Iy~t~~t~~ll~~~l~d~~~~~~~~----------- 290 (640)
T 2xr1_A 227 LY----VPEVFPLNQIDAVIVTHAHLDHQGLVPLLFK-YGYEGPVYCTPPTRDLMVLLQLDYIDVAAKE----------- 290 (640)
T ss_dssp TT----STTTCSGGGCCEEECCSSCHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHHHHH-----------
T ss_pred cc----ccccCCcccCcEEEECCCChhhhccHHHHHh-cCCCCeEEECHHHHHHHHHHHHHHHHHhhhc-----------
Confidence 10 0123 5668999999999 99999999987 4678999999999999988888876554310
Q ss_pred ccchhhhHhhhchhhhhhhhccCCCCCCCCCCch-HHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEE
Q 009999 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPC-IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIIS 236 (520)
Q Consensus 158 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~ 236 (520)
+ ...++ .+++..+..+++.+++++.+++.++++|+++++||++||++|.|+
T Consensus 291 ------------------------g----~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~Gs~~~~i~ 342 (640)
T 2xr1_A 291 ------------------------G----KKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHILGSAISHFH 342 (640)
T ss_dssp ------------------------T----CCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSSTTCEEEEEE
T ss_pred ------------------------c----cCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCcCcEEEEEE
Confidence 0 00122 567777777889999999999955899999999999999999999
Q ss_pred eCCe--EEEEecCCCCCCCCCCcccc-ccCCCCCEEEEcCCCCCCCcccCCCCccccCCC--chhHhhhccCCCchhHHH
Q 009999 237 GAKG--NIAYISGSNFASGHAMDFDY-RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNN--NWEELMNSLSNYDESVEE 311 (520)
Q Consensus 237 ~~~~--~i~Y~sgD~~~~~~~~~~~~-~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~--~~~~~~~~~~~~~~~~~e 311 (520)
.++. +|+| |||++.......... ....++|+||+ |+||++.. |. ++.+
T Consensus 343 ~~~~~~~ilf-tGD~~~~~~~ll~~~~~~~~~~DvLi~--------------EsT~g~~~~~h~---------s~~~--- 395 (640)
T 2xr1_A 343 IGDGLHNVVF-TGDYKYEKTRLFDPAVNKFPRVETVIS--------------EATYGNANAFQP---------ALKD--- 395 (640)
T ss_dssp ETTTTEEEEE-CCSCCSSCCSSCCCCCCBCSCCSEEEE--------------ECTTCSTTCCCC---------CHHH---
T ss_pred ECCceEEEEE-ECCCCCCCccccccccccCCCCcEEEE--------------CCCCCCCccCCC---------CHHH---
Confidence 8887 9999 999976543221111 23468999999 89999876 53 2222
Q ss_pred HHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEcchHHHHHHHHHHhHHHHHHHHHhh
Q 009999 312 MEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 390 (520)
Q Consensus 312 ~~~l~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~~l-~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~ 390 (520)
..++|++.|.++++.||+||||+|++||.||++..|..+++++.+ ++|||++| ++.+++++|..+.+||+...++.
T Consensus 396 --~~~~l~~~i~~~~~~~g~vlIp~favGR~qell~~l~~~~~~~~~~~~~V~~dg-~a~~~~~~~~~~~~~l~~~~~~~ 472 (640)
T 2xr1_A 396 --AEKHLQMVVKNTIERGGIAVIPAFAVGRSQEVMIVLEESIRKGLIPEVPVYLDG-MIWEATAIHATHPEYLNNDLRKL 472 (640)
T ss_dssp --HHHHHHHHC--------CEEEECCTTTHHHHHHHHHHHHHHHTSSCCCCEEEES-SHHHHHHHHHHCGGGSCHHHHHH
T ss_pred --HHHHHHHHHHHHHhcCCeEEEEecccchHHHHHHHHHHHHHhCCCCCCcEEEEh-HHHHHHHHHHHhHhhhcHHHHHH
Confidence 224567889888889999999999999999999999999988877 69999996 99999999999999999987765
Q ss_pred hc-cCCCCCc--ceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcchhh
Q 009999 391 LF-SGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL 467 (520)
Q Consensus 391 ~~-~~~~pf~--~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~~~~ 467 (520)
++ ...+||. +...+++ .++.+.....++|+||||++|||++|+++++|++|+.+++|+|||++|..+..
T Consensus 473 ~~~~~~~~f~~~~~~~~~~--------~~~~~~~~~~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~gt 544 (640)
T 2xr1_A 473 IFQKGQNPFLSECFKPVDS--------HEARQKIIQNPQPCVILATSGMMNGGPVMEYFKAFAEDPRNTLVFVGYQADGT 544 (640)
T ss_dssp C------CTTCTTEEEEC---------CHHHHHC----CCCEEEESCTTSSSSHHHHHHHHHSSCTTCEEEECSCCCTTC
T ss_pred HHhcccCcccCCceEEeCC--------HHHHHHHhcCCCCeEEEeCCCccCCChHHHHHHHhhCCCCCEEEEecCCCCCC
Confidence 53 4567773 3333322 11111111237899999999999999999999999999999999998876533
Q ss_pred c-------------c---CC--CceeeeEEEEec-ccCCCCHHHHHHhhhhcCCCCceeEeeeccc
Q 009999 468 A-------------V---LP--FKPISMKASESS-TLTKDTATEVSSVSRGMEDSCQFFRCYFILS 514 (520)
Q Consensus 468 ~-------------~---~~--~~~v~~~v~~~~-~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~ 514 (520)
. + +. ..+++|+|..+. ||+|||+.||++|++.++|+..+|+.+||..
T Consensus 545 ~gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~g~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~ 610 (640)
T 2xr1_A 545 IGRRIQKGWKEIPMTGKNGSTEMLKMNMEVQVVDGFSGHSDRRQLMEYVKRMQPRPERVFTEHGDE 610 (640)
T ss_dssp HHHHHHTTCCC-----------CCCCCSEEEECCCCSCSCCHHHHHHHHHTCBSCCSEEEEESSCH
T ss_pred HHHHHhhccceeeeeccCCCceEEeeeEEEEEEccccccCCHHHHHHHHHHhccCCCEEEEECCCH
Confidence 0 0 23 456889999998 9999999999999999993333889999864
No 5
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=100.00 E-value=4.5e-51 Score=449.97 Aligned_cols=396 Identities=17% Similarity=0.225 Sum_probs=306.5
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|++++|||+ +++|+||++|+.++.+||+|||...... .+. ...|.
T Consensus 180 m~i~~LG~~-~evg~s~~lI~~~~~~ILID~G~~~~~~-------~~~---------------------------~~~~~ 224 (636)
T 2ycb_A 180 ARLTAMGGF-REVGRSCLYLQTPNSRVLLDCGVNVAGG-------DDK---------------------------NSYPY 224 (636)
T ss_dssp CEEEEEESS-SSSSCCEEEEECSSCEEEEEECCCCSSC-------CHH---------------------------HHSCC
T ss_pred EEEEEEecC-CCCCCCEEEEEECCeEEEEeCCCCcccc-------cch---------------------------hhccc
Confidence 789999998 7899999999999999999999984310 000 00111
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
+ .....+..+||+|||||+ ||+||||+|.+ .++++|||+|++|.++.+.++.+..++++..
T Consensus 225 l----~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~-~~~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~------------ 287 (636)
T 2ycb_A 225 L----NVPEFTLDSLDAVIITHAHLDHSGFLPYLYH-YGYDGPVYCTAPTRDLMTLLQLDHIDIAHRE------------ 287 (636)
T ss_dssp T----TSTTCCTTTCCEEECSSSSHHHHTTHHHHHH-TTCCSCEEECHHHHHHHHHHHHHHHHHHHHH------------
T ss_pred c----ccccCCcccCcEEEECCCChHHhcCHHHHHh-cCCCCeEEEcchHHHHHHHHHHHHHHhhhhc------------
Confidence 1 001236678999999999 99999999987 4678999999999999988888776544310
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCch-HHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEe
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPC-IAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISG 237 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~ 237 (520)
+. ..++ .+++..+..+++.+++++++++.++++|+++++||++|+++|.|+.
T Consensus 288 -----------------------~~----~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~Gs~~~~i~~ 340 (636)
T 2ycb_A 288 -----------------------DE----PLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHILGSAMAHLHI 340 (636)
T ss_dssp -----------------------TC----CCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSSTTCEEEEEEE
T ss_pred -----------------------CC----CCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCCCcEEEEEEE
Confidence 00 0022 5677777778899999999999558999999999999999999998
Q ss_pred CCe--EEEEecCCCCCCCCCCcccc-ccCCCCCEEEEcCCCCCCCcccCCCCccccCCC--chhHhhhccCCCchhHHHH
Q 009999 238 AKG--NIAYISGSNFASGHAMDFDY-RAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNN--NWEELMNSLSNYDESVEEM 312 (520)
Q Consensus 238 ~~~--~i~Y~sgD~~~~~~~~~~~~-~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~--~~~~~~~~~~~~~~~~~e~ 312 (520)
+++ +|+| |||++.......... ....++|+||+ |+||++.. |. ++.+
T Consensus 341 ~~~~~~ilf-tGD~~~~~~~ll~~~~~~~~~~D~LI~--------------EsT~~~~~~~h~---------s~~~---- 392 (636)
T 2ycb_A 341 GDGQHNMVY-TGDFKYEQSRLLEAAANRFPRIETLVM--------------ESTYGGHEDVQP---------SRNR---- 392 (636)
T ss_dssp TTTTTCEEE-CCSCCSSCCSSSCCCCCCCSCCSEEEE--------------ECTTCSGGGCCC---------CHHH----
T ss_pred CCCeEEEEE-ECCCCCCcccccCCcccCCCCCeEEEE--------------CCCCCCCCCCCC---------CHHH----
Confidence 887 9999 999976543221111 13568999999 89999876 42 2221
Q ss_pred HHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCC-ceeEEEEcchHHHHHHHHHHhHHHHHHHHHhhh
Q 009999 313 EKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSL-KIPIYIISSVAEELLAYTNTIPEWLCKQRQEKL 391 (520)
Q Consensus 313 ~~l~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~~l-~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~~ 391 (520)
..++|.+.|.++++.||+||||+|++||+||++.+|..+++++.+ ++|||++| ++.+++++|..+.+||+...++.+
T Consensus 393 -~~~~l~~~i~~~~~~~g~vlIp~fa~GR~qell~~l~~~~~~~~~~~~~V~~dg-~~~~~~~~~~~~~~~l~~~~~~~~ 470 (636)
T 2ycb_A 393 -AEKELVKTIYSTLRRGGKILIPVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDG-MIWEANAIHTARPEYLSKDLRDQI 470 (636)
T ss_dssp -HHHHHHHHHHHHHHHTCCEEEECCTTTHHHHHHHHHHHHHHTTSSCCCCEEEEH-HHHHHHHHHHHSGGGSCHHHHHHH
T ss_pred -HHHHHHHHHHHHHHcCCEEEEEECCCcHHHHHHHHHHHHHHhCCCCCCeEEEeh-HHHHHHHHHHHhHHhhCHHHHHHH
Confidence 224567888899999999999999999999999999999988777 69999985 999999999999999999876655
Q ss_pred c-cCCCCCc--ceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcchhhc
Q 009999 392 F-SGDPLFA--HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAELA 468 (520)
Q Consensus 392 ~-~~~~pf~--~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~~~~~ 468 (520)
+ ...+||. +...+++ ..+.+... .++|+||||++|||++|+++++|++|+.+++|+|||++|..+...
T Consensus 471 ~~~~~~~f~~~~~~~~~~--------~~~~~~l~-~~~~~vIiat~gm~~gg~~~~~l~~~~~~~~~~vi~sg~~~~Gt~ 541 (636)
T 2ycb_A 471 FHMGHNPFISDIFHKVNG--------MDERREIV-EGEPSIILSTSGMLTGGNSLEYFKWLCEDPDNSLVFVGYQAEGSL 541 (636)
T ss_dssp HTTCCCGGGCTTEEEECC--------HHHHHHHH-HSSSCEEEESCSSSSSHHHHHHHHHHTTCTTSEEEECSCCCSSSH
T ss_pred HhccCCcccCCceEEeCC--------HHHHHHhc-cCCCEEEEecCCccCCChHHHHHHHHhCCCCCEEEEecCCCCCCH
Confidence 3 5567873 3333321 11111121 378999999999999999999999999999999999988765320
Q ss_pred -------------c---CC--CceeeeEEEEec-ccCCCCHHHHHHhhhhcCCCCceeEeeeccc
Q 009999 469 -------------V---LP--FKPISMKASESS-TLTKDTATEVSSVSRGMEDSCQFFRCYFILS 514 (520)
Q Consensus 469 -------------~---~~--~~~v~~~v~~~~-~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~ 514 (520)
+ +. ..+++|+|..+. ||+|||++||.+|++.++|+..+|+.+||..
T Consensus 542 gr~l~~g~~~i~~~~~~G~~~~v~v~~~v~~i~~~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~ 606 (636)
T 2ycb_A 542 GRRIQKGWKEIPLKDEDDKMRVYNVRMNIKTIEGFSGHSDRRQLMEYVKRISPKPEKILLCHGDN 606 (636)
T ss_dssp HHHHHTTCCEEEEECSSSCEEEEECCSEEEECCSCCSSCCHHHHHHHHHSCSSCCSEEEEESSCH
T ss_pred HHHhhcCCceeeeeccCCceeEEEeEEEEEEECCcceeCCHHHHHHHHHHhccCCCEEEEECCCH
Confidence 0 23 345789999998 9999999999999999993333889999864
No 6
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=100.00 E-value=3.9e-45 Score=405.08 Aligned_cols=339 Identities=15% Similarity=0.229 Sum_probs=259.2
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++++|++++++++||+|+.++.+||||||+..... .. + .+ ..+
T Consensus 1 m~~t~L~gg~~ev~~n~~LIe~~~~~ILID~G~~~~~~--------~~----~-------------------~~---l~~ 46 (717)
T 2i7x_A 1 MTYKYNCCDDGSGTTVGSVVRFDNVTLLIDPGWNPSKV--------SY----E-------------------QC---IKY 46 (717)
T ss_dssp CCEEEEECCSSSSSCCCEEEEETTEEEEECCCCCTTTS--------CH----H-------------------HH---HHH
T ss_pred CEEEEEeecCCCCCCCEEEEEECCeEEEEeCCCCcccc--------hh----h-------------------hH---HHH
Confidence 89999977768899999999999999999999884210 00 0 00 000
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccC----CceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEG----FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEE 154 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~----~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~ 154 (520)
...... +||+|||||+ ||+||||+|.+.++ .++|||||++|..+++.++.+.++....
T Consensus 47 ------L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~pIY~t~~t~~l~~~~l~d~~~~~~~--------- 110 (717)
T 2i7x_A 47 ------WEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSHFISRIQVYATLPVINLGRVSTIDSYASAGV--------- 110 (717)
T ss_dssp ------HHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTCEEEEEHHHHHHHHHHHHHHHHHTTS---------
T ss_pred ------HHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhcccCCceEEecchhHHHHHHHHHHHHHhhcc---------
Confidence 001123 7999999999 99999999986432 3689999999999999888887543210
Q ss_pred CCCccchhhhHhhhchhhhhhhhccCCCCCCCCC--Cch-HHHHHHHHhhceeeccCCeEEe---CCCEEEEEEecCCCC
Q 009999 155 SSGPQWMKWEELELLPSALRKIALGEDGSELGGG--CPC-IAHVKDCISKVQTLRFGEEACY---NGILIIKAFSSGLDI 228 (520)
Q Consensus 155 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~dv~~~~~~i~~~~y~~~~~l---~~~~~i~~~~aGH~l 228 (520)
...| .++ ..++..++.+++.++|++++.+ .++++|+++++||++
T Consensus 111 ------------------------------~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~ 160 (717)
T 2i7x_A 111 ------------------------------IGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCP 160 (717)
T ss_dssp ------------------------------SSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSST
T ss_pred ------------------------------ccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCC
Confidence 0011 022 5677777889999999999999 358999999999999
Q ss_pred ccEEEEEEeCCeEEEEecCCCCCCCCCCc--cc--------cccCCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHh
Q 009999 229 GACNWIISGAKGNIAYISGSNFASGHAMD--FD--------YRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEEL 298 (520)
Q Consensus 229 Gs~~~~I~~~~~~i~Y~sgD~~~~~~~~~--~~--------~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~ 298 (520)
|+++|.|+.++++|+| |||++....... .+ ...+.++|+||+ |+||++..|.
T Consensus 161 Gs~~~~I~~~~~~Ivy-tGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~--------------EsTy~~~~h~--- 222 (717)
T 2i7x_A 161 GGSIWCISTYSEKLVY-AKRWNHTRDNILNAASILDATGKPLSTLMRPSAIIT--------------TLDRFGSSQP--- 222 (717)
T ss_dssp TCEEEEEECSSCEEEE-CSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEE--------------CCSCCCCSSC---
T ss_pred CcEEEEEEeCCCEEEE-ECCCCCCcccccCccccccccchhHHhccCCcEEEE--------------cCCCCCCCCC---
Confidence 9999999999999999 999976432221 11 123568999999 9999998774
Q ss_pred hhccCCCchhHHHHHHHHHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHH-H---hCCC-ceeEEEEcchHHHHH
Q 009999 299 MNSLSNYDESVEEMEKLAFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM-E---CSSL-KIPIYIISSVAEELL 373 (520)
Q Consensus 299 ~~~~~~~~~~~~e~~~l~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~-~---~~~l-~~pI~~~s~~a~~~~ 373 (520)
.+ +++.+|++.|.+++++||+||||+|++||+|||+.+|..+| + ++.+ ++|||++|+++.+++
T Consensus 223 ------~~------~~~~~l~~~i~~~l~~~G~VlIp~fa~gR~qell~~l~~~~~~~~~~~~~~~~pI~l~g~~a~~~~ 290 (717)
T 2i7x_A 223 ------FK------KRSKIFKDTLKKGLSSDGSVIIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTL 290 (717)
T ss_dssp ------HH------HHHHHHHHHHHHHTSTTCEEEEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHH
T ss_pred ------CH------HHHHHHHHHHHHHHhCCCeEEEEeccchHHHHHHHHHHHhhhhhhccccCCCceEEEECHHHHHHH
Confidence 11 13346788899999999999999999999999999999988 2 2344 689999999999999
Q ss_pred HHHHHhHHHHHHHHHhhhccCC--CCCc---ceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHH
Q 009999 374 AYTNTIPEWLCKQRQEKLFSGD--PLFA---HVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRR 448 (520)
Q Consensus 374 ~~~~~~~e~l~~~~~~~~~~~~--~pf~---~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~ 448 (520)
++|+.+.+||++..++.+.... .||. ++++ .+ . +.+...++|+||+||+ .+|+++++|.+
T Consensus 291 ~i~~~~~e~l~~~~~~~~~~~~~~~pf~~~~~l~~-~~--------~---~~l~~~~~p~VI~aSG---~gG~~~~~L~~ 355 (717)
T 2i7x_A 291 TYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIKI-IA--------P---NELSKYPGSKICFVSE---VGALINEVIIK 355 (717)
T ss_dssp HHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTEEE-CC--------G---GGGGGCCSCEEEEEES---CHHHHHHHHHH
T ss_pred HHHHHHHHHhChHHHHHHhcccccCCccccccCcc-CC--------H---HHHhhCCCCEEEEECC---CCHHHHHHHHH
Confidence 9999999999988765544323 4764 2332 11 2 2344556799888866 89999999999
Q ss_pred HcCCCCCceeecCCcc
Q 009999 449 WSGDHNSLLVLENEVD 464 (520)
Q Consensus 449 ~~~~~~n~iil~~~~~ 464 (520)
|+.|++|+|||++|..
T Consensus 356 ~a~~~~n~VIf~g~~~ 371 (717)
T 2i7x_A 356 VGNSEKTTLILTKPSF 371 (717)
T ss_dssp HSSCTTEEEEECSSCC
T ss_pred HcCCCcCEEEEEcCCC
Confidence 9999999999999877
No 7
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-37 Score=336.23 Aligned_cols=354 Identities=13% Similarity=0.088 Sum_probs=253.3
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|++++|||. +++|+||++++.++..||+|||..+.... ..+. ..+.....+
T Consensus 9 i~i~~lGg~-~eiG~n~~li~~~~~~iLID~G~~~~~~~-----~~g~-----------------------d~iip~~~~ 59 (555)
T 3zq4_A 9 TAVFALGGL-GEIGKNTYAVQFQDEIVLIDAGIKFPEDE-----LLGI-----------------------DYVIPDYTY 59 (555)
T ss_dssp EEEEEEESB-SSSSCCEEEEEETTEEEEEEECCBCCCTT-----STTC-----------------------SEEEECCHH
T ss_pred EEEEEcCCC-CccCCEEEEEEECCeEEEEeCCCCCCccc-----cccc-----------------------cccccCHHH
Confidence 578999999 79999999999999999999998743210 0000 000011111
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
...+..+||+|||||+ ||+||||+|.+. +++|||+|+.|.++.+..+.+.. .
T Consensus 60 -------l~~~~~~Id~I~lTH~H~DHiggl~~l~~~--~~~pIy~t~~t~~ll~~~l~~~~--------~--------- 113 (555)
T 3zq4_A 60 -------LVKNEDKIKGLFITHGHEDHIGGIPYLLRQ--VNIPVYGGKLAIGLLRNKLEEHG--------L--------- 113 (555)
T ss_dssp -------HHTTTTTEEEEEESCCCHHHHTTHHHHHTT--CCCCEEECHHHHHHHHHHHHHHS--------T---------
T ss_pred -------HhcCccCCCEEEECCCchhhhCCHHHHHHh--cCceEEECHHHHHHHHHHHHHcC--------c---------
Confidence 1225678999999999 999999999873 68899999999988766554420 0
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCC-CCccEEEEEEe
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWIISG 237 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH-~lGs~~~~I~~ 237 (520)
+.+ ..++.+++++++++ ++++|++++++| ++|+++|.|+.
T Consensus 114 -----------------------------~~~---------~~~~~v~~g~~~~i-g~~~v~~~~~~H~~pgs~~~~i~~ 154 (555)
T 3zq4_A 114 -----------------------------LRQ---------TKLNIIGEDDIVKF-RKTAVSFFRTTHSIPDSYGIVVKT 154 (555)
T ss_dssp -----------------------------TTT---------CCEEECCTTCCEEE-TTEEEEEEEEBCSSSSEEEEEEEE
T ss_pred -----------------------------cCC---------CceEEeCCCCEEEE-CCEEEEEEeCCCCCcCcEEEEEEE
Confidence 000 24678899999999 589999999999 78999999999
Q ss_pred CCeEEEEecCCCCCCCCCC--ccccccC-----CCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHH
Q 009999 238 AKGNIAYISGSNFASGHAM--DFDYRAI-----QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVE 310 (520)
Q Consensus 238 ~~~~i~Y~sgD~~~~~~~~--~~~~~~~-----~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~ 310 (520)
++.+|+| |||+.....+. ..+...+ +++|+||+ ||||+++.+. . ..
T Consensus 155 ~~~~il~-tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~--------------esT~~~~~~~---------~-~s-- 207 (555)
T 3zq4_A 155 PPGNIVH-TGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLS--------------DSTNSENPEF---------T-MS-- 207 (555)
T ss_dssp TTEEEEE-CCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEE--------------ECTTTTCCSC---------C-CC--
T ss_pred CCcEEEE-eCCCCCCCCcCcCccCHHHHHHhcccCCcEEEe--------------cCcccCCCCC---------C-CC--
Confidence 9999999 99997654332 1232222 47999999 8999986542 1 01
Q ss_pred HHHHHHHHHHHHHHHHhc-CCeEEEecCC--hHHHHHHHHHHHHHHHhCCCceeEEEEcchHHHHHHHHHHhHHHHHHHH
Q 009999 311 EMEKLAFICSCAIDSVKA-GGSVLIPINR--VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQR 387 (520)
Q Consensus 311 e~~~l~~l~~~I~~tl~~-gG~VLIP~~~--~Gr~qEll~~L~~~~~~~~l~~pI~~~s~~a~~~~~~~~~~~e~l~~~~ 387 (520)
+ .++.+.+.+++++ +|+|+||+|+ +||+||++..+..+ ..+|++++..+.++++++..+ .|+.
T Consensus 208 e----~~v~~~i~~~~~~~~grvii~~fasnv~R~q~il~~a~~~------gr~v~v~grs~~~~~~~~~~~-g~l~--- 273 (555)
T 3zq4_A 208 E----RRVGESIHDIFRKVDGRIIFATFASNIHRLQQVIEAAVQN------GRKVAVFGRSMESAIEIGQTL-GYIN--- 273 (555)
T ss_dssp H----HHHHHHHHHHHHHCCSCEEEECCTTCHHHHHHHHHHHHTT------TCEEEEESHHHHHHHHHHHGG-GSCC---
T ss_pred H----HHHHHHHHHHHHhCCCEEEEEEChhHHHHHHHHHHHHHHH------CCEEEEeCHHHHHHHHHHHHc-CCcc---
Confidence 1 1234567777775 8999999999 99999999988443 468999998888888877654 2211
Q ss_pred HhhhccCCCCCcceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCC--------ceee
Q 009999 388 QEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNS--------LLVL 459 (520)
Q Consensus 388 ~~~~~~~~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n--------~iil 459 (520)
++...++.. + +.....+++.|+++|++ .|....+|.+++.+++| +|||
T Consensus 274 ----------~p~~~~v~~---------~--~~~~~~~~~~vii~tgs---qGe~~~~L~r~a~~~~~~~~~~~~d~vi~ 329 (555)
T 3zq4_A 274 ----------CPKNTFIEH---------N--EINRMPANKVTILCTGS---QGEPMAALSRIANGTHRQISINPGDTVVF 329 (555)
T ss_dssp ----------CCGGGEECG---------G--GTTTSCGGGEEEEECCT---TCCTTSHHHHHHSSCCSSCCCCTTCEEEE
T ss_pred ----------CCcccEeCH---------H--HHhhCCCCCEEEEeCCC---CchHHHHHHHHhcCCCCccccCCCCEEEE
Confidence 111112211 1 12223345778888877 58888999999999887 8999
Q ss_pred cCCcchh-h-----ccCCCceeeeEEEE-----ecccCCCCHHHHHHhhhhcCCCCceeEeeecccc
Q 009999 460 ENEVDAE-L-----AVLPFKPISMKASE-----SSTLTKDTATEVSSVSRGMEDSCQFFRCYFILSL 515 (520)
Q Consensus 460 ~~~~~~~-~-----~~~~~~~v~~~v~~-----~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~~ 515 (520)
+++.-|. + .........++|.+ +.+|+||+++||..|++.++|+ +|+.+||..+
T Consensus 330 s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~SgHa~~~eL~~~~~~~~Pk--~~ipvHGe~~ 394 (555)
T 3zq4_A 330 SSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSGHGGQEEQKLMLRLIKPK--FFMPIHGEYR 394 (555)
T ss_dssp CSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCSSCCHHHHHHHHHHSCEE--EEEEESBCHH
T ss_pred ECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeCCCCHHHHHHHHHHhCCC--EEEEcCCCHH
Confidence 8765332 1 11112334567654 7899999999999999999999 8899999743
No 8
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=100.00 E-value=2.3e-35 Score=320.40 Aligned_cols=357 Identities=11% Similarity=0.069 Sum_probs=237.3
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|++++|||+ +++|+||++|+.++..||+|||..+.... ..+.. .+ .|.
T Consensus 17 ~~i~~LGg~-~eig~n~~li~~~~~~iLID~G~~~~~~~-----~~g~~-----------------------~~---~p~ 64 (562)
T 3bk2_A 17 VEIIPLGGM-GEIGKNITVFRFRDEIFVLDGGLAFPEEG-----MPGVD-----------------------LL---IPR 64 (562)
T ss_dssp EEEEEEESB-SBSSCCEEEEEETTEEEEECCCCBCCCTT-----STTCC-----------------------EE---EEC
T ss_pred EEEEEecCC-CCcCCCEEEEEECCeEEEEECCCCCCccc-----ccccc-----------------------cc---ccc
Confidence 689999998 78999999999999999999998743200 00000 00 011
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhccc---CCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEES 155 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~---~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~ 155 (520)
+. ....+..+||+|||||+ ||+||||+|.+.. .-++|||+|+.|.++.+..+.+.
T Consensus 65 ~~----~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~~~~~~~~pIy~~~~t~~~l~~~l~~~---------------- 124 (562)
T 3bk2_A 65 VD----YLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMIFGKESPVPIYGARLTLGLLRGKLEEF---------------- 124 (562)
T ss_dssp CH----HHHHTGGGEEEEECCCCCHHHHTTHHHHHHHHHCSCCCSEEEEEHHHHHHHHHHHHHT----------------
T ss_pred hh----hhhcCcccCcEEEECCCChHHhCCHHHHHHhhccccCCceEEeCHHHHHHHHHHHHHc----------------
Confidence 10 01124568999999999 9999999998732 01689999999998766544321
Q ss_pred CCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCC-CCccEEEE
Q 009999 156 SGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWI 234 (520)
Q Consensus 156 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH-~lGs~~~~ 234 (520)
+ ...+ . ..++.+++++.++++++++|++++++| ++||++|.
T Consensus 125 --------------------------~--~~~~-~---------~~~~~v~~g~~~~lg~~~~v~~~~~~H~~~gs~~~~ 166 (562)
T 3bk2_A 125 --------------------------G--LRPG-A---------FNLKEISPDDRIQVGRYFTLDLFRMTHSIPDNSGVV 166 (562)
T ss_dssp --------------------------T--CCST-T---------SEEEEECTTCEEEETTTEEEEEEECCCSSSSCEEEE
T ss_pred --------------------------C--CCcC-C---------ceEEEECCCCEEEeCCCEEEEEEECCCCCcccEEEE
Confidence 0 0000 0 256788999999995339999999999 68999999
Q ss_pred EEeCCeEEEEecCCCCCCCCCC---ccccccC-----CCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCc
Q 009999 235 ISGAKGNIAYISGSNFASGHAM---DFDYRAI-----QGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYD 306 (520)
Q Consensus 235 I~~~~~~i~Y~sgD~~~~~~~~---~~~~~~~-----~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~ 306 (520)
|+.++.+|+| |||+.....+. ..+...+ +++|+||+ |+||+...+. .+.
T Consensus 167 i~~~~~~il~-tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~--------------EsT~~~~~g~--------~~~ 223 (562)
T 3bk2_A 167 IRTPIGTIVH-TGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIA--------------DATNAERPGY--------TPS 223 (562)
T ss_dssp EEETTEEEEE-CCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEE--------------ECTTTTCCSC--------CCC
T ss_pred EEECCeEEEE-cCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEe--------------cccCCCCCCC--------CCh
Confidence 9999999999 99996543322 1222111 57999999 8999865432 011
Q ss_pred hhHHHHHHHHHHHHHHHHHHh-cCCeEEEecCC--hHHHHHHHHHHHHHHHhCCCceeEEEEcchHHHHHHHHHHhHHHH
Q 009999 307 ESVEEMEKLAFICSCAIDSVK-AGGSVLIPINR--VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWL 383 (520)
Q Consensus 307 ~~~~e~~~l~~l~~~I~~tl~-~gG~VLIP~~~--~Gr~qEll~~L~~~~~~~~l~~pI~~~s~~a~~~~~~~~~~~e~l 383 (520)
+. .+.+.+.++++ .+|+|++|+|+ .||+|+++..+..+ ..+|++++....+++++|+.. +|+
T Consensus 224 ----e~----~v~~~l~~~~~~~~grvii~~fas~~~r~q~il~~a~~~------~r~V~v~g~s~~~~~~~~~~~-g~l 288 (562)
T 3bk2_A 224 ----EM----EIAKELDRVIGRAPGRVFVTTFASHIHRIQSVIWAAEKY------GRKVAMEGRSMLKFSRIALEL-GYL 288 (562)
T ss_dssp ----HH----HHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHT------TCEEEEECHHHHHHHHHHHHT-TSC
T ss_pred ----HH----HHHHHHHHHHHhCCCEEEEEEccccchHHHHHHHHHHHh------CCEEEEEChHHHHHHHHHHhc-Ccc
Confidence 10 12234445554 68999999999 99999999987543 358888654445666666532 232
Q ss_pred HHHHHhhhccCCCCCcceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcC--------CCCC
Q 009999 384 CKQRQEKLFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSG--------DHNS 455 (520)
Q Consensus 384 ~~~~~~~~~~~~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~--------~~~n 455 (520)
. .+++| +. ..+.....++++|+++|+++ |.....+.+|+. +++|
T Consensus 289 ~---------~~~~~-----i~-----------~~~~~~~~~~~~vi~~tg~~---ge~~~~l~ria~~~h~~~~~~~~~ 340 (562)
T 3bk2_A 289 K---------VKDRL-----YT-----------LEEVKDLPDHQVLILATGSQ---GQPMSVLHRLAFEGHAKMAIKPGD 340 (562)
T ss_dssp C---------CSSCC-----BC-----------TGGGTTSCGGGEEEEECCTT---SCSHHHHHHHHTTCCSSCCCCTTC
T ss_pred c---------CCCCc-----cC-----------HHHHhcCCCCCEEEEEcCCC---chhHHHHHhhhhcccccccCCCCC
Confidence 1 12222 11 11111222445677777553 444445677764 7889
Q ss_pred ceeecCCcchhh------ccCCCceeeeEEE-----EecccCCCCHHHHHHhhhhcCCCCceeEeeecccc
Q 009999 456 LLVLENEVDAEL------AVLPFKPISMKAS-----ESSTLTKDTATEVSSVSRGMEDSCQFFRCYFILSL 515 (520)
Q Consensus 456 ~iil~~~~~~~~------~~~~~~~v~~~v~-----~~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~~ 515 (520)
+|||+++.-+.. .........++|. .+.+|+|||++||.+|++.++|+ +|+.+||..+
T Consensus 341 ~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk--~vipvHGe~~ 409 (562)
T 3bk2_A 341 TVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPR--FFLPWHGEVR 409 (562)
T ss_dssp EEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCS--EEEEESBCHH
T ss_pred EEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCC--EEEEEcCCHH
Confidence 999998765432 1112223456654 46899999999999999999999 8899998654
No 9
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.97 E-value=8.8e-31 Score=276.06 Aligned_cols=387 Identities=11% Similarity=0.012 Sum_probs=227.3
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|++|||+ +++|+||++|+.++..||||||........+ |... .. ...+....++++.+.....
T Consensus 7 m~i~~lG~~-~~~g~n~~li~~~~~~iLiD~G~~~~~~~~~-~~~~-~~-----------~~~~~~~~~~~~~l~~~~~- 71 (429)
T 2az4_A 7 TTVTFHSGI-LTIGGTVIEVAYKDAHIFFDFGTEFRPELDL-PDDH-IE-----------TLINNRLVPELKDLYDPRL- 71 (429)
T ss_dssp EEEEEEECT-TSSSCCEEEEEETTEEEEECCCCCCCTTCCC-SCCC-HH-----------HHHHTTSSCCCSSCBCGGG-
T ss_pred eEEEEeeCC-CccCCeEEEEEECCeEEEEecCCCCCcccCC-Ccch-hh-----------hccCCcccCCchhhhcccc-
Confidence 789999998 7899999999999999999999985421100 0000 00 0000000111111100000
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
..|......+..+||+|||||+ ||+||||+|.+ +.|||+|+.|.++.+.+..+. .
T Consensus 72 -~~p~~~~~~~~~~i~~v~lTH~H~DHiggl~~l~~----~~~iy~~~~~~~~~~~~~~~~------------------~ 128 (429)
T 2az4_A 72 -GYEYHGAEDKDYQHTAVFLSHAHLDHSRMINYLDP----AVPLYTLKETKMILNSLNRKG------------------D 128 (429)
T ss_dssp -CCCCCSSCCCCCSEEEEECSCSCHHHHTTGGGBCT----TSCEEEEHHHHHHHHHHTTTS------------------C
T ss_pred -cccchhhhhccccCCEEEECCchHHHhCcHhHhcC----CCCEEECHHHHHHHHHHHHhC------------------c
Confidence 0000112346778999999999 99999999976 679999999988754321100 0
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCC-CCccEEEEEEe
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL-DIGACNWIISG 237 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH-~lGs~~~~I~~ 237 (520)
.|. +... .. . . + ..+++.+++++.+++ ++++|++++++| +.|+++|+|+.
T Consensus 129 ~~~--------~~~~-------~~--~-~--~--------~~~~~~~~~g~~~~~-g~~~v~~~~~~H~~~gs~~~~i~~ 179 (429)
T 2az4_A 129 FLI--------PSPF-------EE--K-N--F--------TREMIGLNKNDVIKV-GEISVEIVPVDHDAYGASALLIRT 179 (429)
T ss_dssp SSC--------CCTT-------SC--T-T--C--------CCCCEEECTTCEEEE-TTEEEEEEECCCSSTTCEEEEEEE
T ss_pred ccc--------cccc-------cc--c-c--c--------cceEEEeCCCCeEEE-CCEEEEEEECCCCChhhEEEEEEe
Confidence 010 0000 00 0 0 0 025778899999999 589999999999 78999999999
Q ss_pred CCeEEEEecCCCCCCCCCCc---cccccCCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHHHHHH
Q 009999 238 AKGNIAYISGSNFASGHAMD---FDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEK 314 (520)
Q Consensus 238 ~~~~i~Y~sgD~~~~~~~~~---~~~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~e~~~ 314 (520)
++++++| |||+........ .-.+..+++|+||+ |+||++..... . ...... ...+.
T Consensus 180 ~~~~i~~-tGD~~~~~~~~~~~~~~~~~~~~~d~Li~--------------Est~~~~~~~~--~-~~~~~~-~~s~~-- 238 (429)
T 2az4_A 180 PDHFITY-TGDLRLHGHNREETLAFCEKAKHTELLMM--------------EGVSISFPERE--P-DPAQIA-VVSEE-- 238 (429)
T ss_dssp TTEEEEE-CCSCCSSSTTHHHHHHHHHHHTTCSEEEE--------------ECCGGGSCCCC--C-CTTBCC-CCSHH--
T ss_pred CCcEEEE-CCCcccCCCchHHHHHHHHhccCCCEEEE--------------CCCCcCccccc--c-cccCCC-CCCHH--
Confidence 9999999 999964322110 01123458999999 88887632100 0 000000 00011
Q ss_pred HHHHHHHHHHHHhc-CCeEEEecCC---hHHHHHHHHHHHHHHHhCCCceeEEEEcchHHHHHHHHHHhHHHHHHHHHhh
Q 009999 315 LAFICSCAIDSVKA-GGSVLIPINR---VGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEK 390 (520)
Q Consensus 315 l~~l~~~I~~tl~~-gG~VLIP~~~---~Gr~qEll~~L~~~~~~~~l~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~ 390 (520)
++.+.+.+++++ +++++||.+. .+|+|++ + .+. ..||+++++++..+++++.....
T Consensus 239 --~~~~~i~~~~~~~~~rlil~h~~~~~~~r~~~~---a----~~~--gr~v~~~g~~~~~~~~~~~~~~~--------- 298 (429)
T 2az4_A 239 --DLVQHLVRLELENPNRQITFNGYPANVERFAKI---I----EKS--PRTVVLEANMAALLLEVFGIEVR--------- 298 (429)
T ss_dssp --HHHHHHHHHHHTCSSSCEEEEECTTCHHHHHHH---H----HHC--SSEEEEEHHHHHHHHHHHCCCCE---------
T ss_pred --HHHHHHHHHHHhCCCcEEEEEeccchHHHHHHH---H----HHh--CCEEEEEChhHHHHHhhccccCe---------
Confidence 123445555555 4668998877 7888888 2 122 35999999988777776521111
Q ss_pred hccCCCCCcceeeeeccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceeecCCcchhh---
Q 009999 391 LFSGDPLFAHVKLIKEKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVLENEVDAEL--- 467 (520)
Q Consensus 391 ~~~~~~pf~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil~~~~~~~~--- 467 (520)
++.. |......+.... +.+.+.....+++.|++ | .|+. ..+ .+++++|+++...+..
T Consensus 299 ~~~~--~~~~~~~~~~~~------~~~~~~~~~~~~~~ii~----~--~~~~----~~l--~~~~~vi~s~~~~~g~~~~ 358 (429)
T 2az4_A 299 YYYA--ESGKIPELNPAL------EIPYDTLLKDKTDYLWQ----V--VNQF----DNL--QEGSLYIHSDAQPLGDFDP 358 (429)
T ss_dssp EECS--SSSCCTTSCGGG------BCCHHHHHHCSSSEEEE----C--CSCG----GGS--CTTCEEEEESCSSCSTTSH
T ss_pred eEec--ccccccccCccc------eecHHHHhhCCCcEEEE----e--cCcH----Hhh--CCCCEEEEeCCCCCcccch
Confidence 1110 000000000000 11223334456666665 2 3441 133 3357888875332211
Q ss_pred ----ccCCCceeeeEEEEecccCCCCHHHHHHhhhhcCCCCceeEeeecccccc
Q 009999 468 ----AVLPFKPISMKASESSTLTKDTATEVSSVSRGMEDSCQFFRCYFILSLPL 517 (520)
Q Consensus 468 ----~~~~~~~v~~~v~~~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~~~~~ 517 (520)
.......+.++|..+.+|+|||++||.+|++.++|+ +|+.+||..+-+
T Consensus 359 ~~~~~~~~~~~~~~~v~~i~~SgHa~~~eL~~~~~~~~Pk--~~ipvHGe~~~~ 410 (429)
T 2az4_A 359 QYRVFLDLLAKKDITFVRLACSGHAIPEDLDKIIALIEPQ--VLVPIHTLKPEK 410 (429)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSSCCHHHHHHHHHHHCCS--EEEEESCSCGGG
T ss_pred HHHHHHHHHHhCCCEEEEEeecCCCCHHHHHHHHHhhCCC--EEEECCCCchhh
Confidence 111123567888899999999999999999999999 889999976543
No 10
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=235.85 Aligned_cols=283 Identities=11% Similarity=0.049 Sum_probs=183.4
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
..+||+|||||+ ||+||||. ++++|||+|+.|.++.+..+.
T Consensus 49 ~~~IdaI~lTH~H~DHiggl~~-----~~~~pIy~s~~t~~ll~~~l~-------------------------------- 91 (367)
T 4b87_A 49 VEGCTAYFLTHFHSDHYAGLSK-----HFTFPVYCSEITGNLLKNKLH-------------------------------- 91 (367)
T ss_dssp CTTCCEEECCCCCHHHHTTCST-----TCCSCEEECHHHHHHHHHHSC--------------------------------
T ss_pred ccCCcEEEECcChHHHhCCccc-----ccCCcEEECHHHHHHHHHHhc--------------------------------
Confidence 457999999999 99999993 457899999999876432100
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEe-CCeEEEEecCC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISG-AKGNIAYISGS 248 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~-~~~~i~Y~sgD 248 (520)
. .. ..++.+++++++.+ ++++|+++++||++|+++|.|+. ++++|+| |||
T Consensus 92 ---------------~---~~---------~~~~~l~~g~~~~i-g~~~v~~~~agH~~gs~~~~i~~~~g~~il~-tGD 142 (367)
T 4b87_A 92 ---------------V---QE---------QYIHPLPLDTECIV-NGVKVVLLDANHCPGAVMILFYLPNGTVILH-TGD 142 (367)
T ss_dssp ---------------C---CG---------GGEEECCBTSCEEE-TTEEEEEEECSSSTTCEEEEEECTTSCEEEE-CCS
T ss_pred ---------------c---cc---------ceEEEeCCCCEEEE-CCEEEEEEeCCCcCCcEEEEEEcCCCcEEEE-ecC
Confidence 0 00 25678889999999 58999999999999999999986 5667999 999
Q ss_pred CCCCCCCCcccccc-CCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHHHHHHHHHHHHHHHHHHh
Q 009999 249 NFASGHAMDFDYRA-IQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCAIDSVK 327 (520)
Q Consensus 249 ~~~~~~~~~~~~~~-~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~I~~tl~ 327 (520)
+........ ... ..++|+||+ |+||+++.+. .++++ +.++++++.+.++++
T Consensus 143 ~~~~~~~~~--~~l~~~~~D~Li~--------------EsTy~~~~~~-------~ps~~-----~~~~~~~~~i~~~~~ 194 (367)
T 4b87_A 143 FRADPSMER--SLLADQKVHMLYL--------------DTTYCSPEYT-------FPSQQ-----EVIRFAINTAFEAVT 194 (367)
T ss_dssp CCCCGGGGG--SGGGTSCCCEEEE--------------CCTTCSTTCC-------CCCHH-----HHHHHHHHHHHHHHH
T ss_pred cccCcccch--hhhccCCCCEEEE--------------ecccCCCCCC-------CCCHH-----HHHHHHHHHHHHHHH
Confidence 976433221 122 258999999 9999987642 11222 223345677777777
Q ss_pred cCCeE--EEecCChHHHHHHHHHHHHHHHhCCCceeEEEEcchHHHHHHHHHHhHHHHHHHHHhhhccCCCCCcceeeee
Q 009999 328 AGGSV--LIPINRVGVFLQLLEQIAIFMECSSLKIPIYIISSVAEELLAYTNTIPEWLCKQRQEKLFSGDPLFAHVKLIK 405 (520)
Q Consensus 328 ~gG~V--LIP~~~~Gr~qEll~~L~~~~~~~~l~~pI~~~s~~a~~~~~~~~~~~e~l~~~~~~~~~~~~~pf~~~~~~~ 405 (520)
.+|++ ++|+|++||.|+++.++..+ ..+|++.. ...++++.+. + +.. ..+ +.
T Consensus 195 ~~g~~~v~~~a~~igr~q~ll~ia~~~------g~ki~v~~-~~~~il~~l~----~--~~~-~~~------------~t 248 (367)
T 4b87_A 195 LNPHALVVCGTYSIGKEKVFLAIADVL------GSKVGMSQ-EKYKTLQCLN----I--PEI-NSL------------IT 248 (367)
T ss_dssp HCTTEEEEEEESSSCCHHHHHHHHHHT------TCCEECCH-HHHHHHHTTC----C--TTH-HHH------------EE
T ss_pred hCCCeEEEEccchhHHHHHHHHHHHHh------CCEEEEeH-HHHHHHHhcC----C--chh-hhh------------cc
Confidence 67764 57889999999999998553 57888863 2222222111 0 000 001 11
Q ss_pred ccccccccccCChhhhccCCCCEEEEecCCCCCcchHHHHHHHHcCCCCCceee-cCCcchhh---c---cCCCceeeeE
Q 009999 406 EKKIHVFPAVHSPKLLMNWQEPCIVFSPHWSLRLGPTIHLLRRWSGDHNSLLVL-ENEVDAEL---A---VLPFKPISMK 478 (520)
Q Consensus 406 ~~~l~~~~~~~~~~~~~~~~~p~Vv~as~~~l~~G~s~~~l~~~~~~~~n~iil-~~~~~~~~---~---~~~~~~v~~~ 478 (520)
+ ++ ..-.|-+++-..++......|+.....+....+-| +.|..... . ..|...-++.
T Consensus 249 ~----------d~------~~~~vh~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~ptgw~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T 4b87_A 249 T----------DM------CSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNIS 312 (367)
T ss_dssp S----------CG------GGCSEEEEEGGGCSHHHHHHHHHSGGGCCCEEEEEEECC----------CCCCCEEETTEE
T ss_pred c----------CC------ccceEEEeecCcCCHHHHHHHHHHhhcccccEEEEcCcccccCCCCCcccccccccCCceE
Confidence 1 00 01123444444444455556666665555454444 32222111 1 1222233578
Q ss_pred EEEecccCCCCHHHHHHhhhhcCCCCceeEeeec
Q 009999 479 ASESSTLTKDTATEVSSVSRGMEDSCQFFRCYFI 512 (520)
Q Consensus 479 v~~~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~ 512 (520)
++.+|+|.|+++.||.++++.++|+ .|+=++.
T Consensus 313 ~~~vpySeHss~~EL~~fv~~l~p~--~iiptv~ 344 (367)
T 4b87_A 313 IYGIPYSEHSSYLEMKRFVQWLKPQ--KIIPTVN 344 (367)
T ss_dssp EEEECCCSSCCHHHHHHHHHHHCCS--EEEECSS
T ss_pred EEEEeccCCCCHHHHHHHHHhcCCC--eEECeec
Confidence 8999999999999999999999999 5565554
No 11
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=220.23 Aligned_cols=176 Identities=11% Similarity=0.088 Sum_probs=127.2
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
..+||+|||||+ ||+||||++. ++|||||+.|.++.+..+.+
T Consensus 22 ~~~i~ai~lTH~H~DHiggl~~l~-----~~pVy~s~~t~~ll~~~l~~------------------------------- 65 (336)
T 3zdk_A 22 AGTARLFFLSHMHSDHTVGLSSTW-----ARPLYCSPITAHLLHRHLQV------------------------------- 65 (336)
T ss_dssp HCSSCEEECCCCCGGGSTTCSTTC-----CSCEEECHHHHHHHHHHHCC-------------------------------
T ss_pred CCCCCEEEECCChHHHHCchHHHc-----CCCEEecHHHHHHHHHhhhh-------------------------------
Confidence 357999999999 9999999974 57999999998876542211
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeC------CCEEEEEEecCCCCccEEEEEEeCCeEEE
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYN------GILIIKAFSSGLDIGACNWIISGAKGNIA 243 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~------~~~~i~~~~aGH~lGs~~~~I~~~~~~i~ 243 (520)
+ + ..++.+++++.+.+. ++++|+++++||++|+++|.|+.++++|+
T Consensus 66 ------------------~-~---------~~~~~~~~~~~~~i~~~~~~~g~~~v~~~~~~H~~gs~~~~i~~~~~~i~ 117 (336)
T 3zdk_A 66 ------------------S-K---------QWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFGTIL 117 (336)
T ss_dssp ------------------C-T---------TTEEECCTTSEEEEESSSSSSCEEEEEEEECSSSTTCEEEEEEETTEEEE
T ss_pred ------------------c-c---------cceEecCCCCeEEecCcccccCCEEEEEEECCCCcceEEEEEEeCCceEE
Confidence 0 0 134566667766541 58999999999999999999999999999
Q ss_pred EecCCCCCCCCCCcc-ccccCCCCCEEEEcCCCCCCCcccCCCCccccCCCchhHhhhccCCCchhHHHHHHHHHHHHHH
Q 009999 244 YISGSNFASGHAMDF-DYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNNNWEELMNSLSNYDESVEEMEKLAFICSCA 322 (520)
Q Consensus 244 Y~sgD~~~~~~~~~~-~~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~I 322 (520)
| |||+......... .....+++|+||+ |+||+++.+. .+++++. .+++.+.+
T Consensus 118 ~-tGD~~~~~~~~~~~~l~~~~~vD~Li~--------------DsT~~~~~~~-------~pse~~v-----~~~l~~~i 170 (336)
T 3zdk_A 118 Y-TGDFRYTPSMLKEPALTLGKQIHTLYL--------------DNTNCNPALV-------LPSRQEA-----AHQIVQLI 170 (336)
T ss_dssp E-CCSCCCCGGGGGCGGGSSCCCCSEEEE--------------CCTBCCTTCC-------CCCHHHH-----HHHHHHHH
T ss_pred E-eCCCCCCcccccchhhhccCCccEEEE--------------ecCCCCCCCC-------CCCHHHH-----HHHHHHHH
Confidence 9 9999754322111 1113578999999 9999997652 1122221 22333344
Q ss_pred HHHHhcCCeEEEecCChHHHHHHHHHHHHHHHhCCCceeEEEEc
Q 009999 323 IDSVKAGGSVLIPINRVGVFLQLLEQIAIFMECSSLKIPIYIIS 366 (520)
Q Consensus 323 ~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~~~~~l~~pI~~~s 366 (520)
.++ .||+|+||+|++||.|+++.+...+ ..+|++++
T Consensus 171 ~~~--~~g~vii~~f~vgR~q~i~~~a~~~------grkV~v~g 206 (336)
T 3zdk_A 171 RKH--PQHNIKIGLYSLGKESLLEQLALEF------QTWVVLSP 206 (336)
T ss_dssp HTC--TTSEEEEEECSSSCHHHHHHHHHHH------TCCEECCH
T ss_pred HhC--CCCcEEEeecchHHHHHHHHHHHHc------CCEEEEEh
Confidence 432 3789999999999999999988554 46888874
No 12
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.77 E-value=1.2e-18 Score=176.05 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=124.6
Q ss_pred CeEEEcCCCCCCC----CCCeEEEEE---CCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccc
Q 009999 1 MKFTCLCQGGGFN----FPPCHILNV---SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAND 73 (520)
Q Consensus 1 mkl~~lGg~~~~~----~~sc~ll~~---~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (520)
|+|++||++++.+ +.+|++|+. ++..+|||||......
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~----------------------------------- 45 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQ----------------------------------- 45 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHH-----------------------------------
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHH-----------------------------------
Confidence 9999999984333 479999999 9999999999873210
Q ss_pred ccccccccccccccccccCCcccEEEecCC--CCCCchhhhhccc---C--CceeEEEeHHHHHHHHHHHHHHHHHHHhh
Q 009999 74 LIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRME---G--FSAKIYITEAAARIGQLMMEELICMNMEY 146 (520)
Q Consensus 74 l~~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~---~--~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~ 146 (520)
+ . ...++..+||+|||||. ||++|||.|.+.. + ...+||+++.+.++.+..+.. ..
T Consensus 46 l-~----------~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~----~~-- 108 (320)
T 1y44_A 46 M-L----------HTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKGIKAFIETSLAV----TK-- 108 (320)
T ss_dssp H-T----------TSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHH----TT--
T ss_pred H-H----------HcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEEeCHHHHHHHHHHHHh----hc--
Confidence 0 0 01124567999999999 9999999887632 2 256899999997755433211 00
Q ss_pred hhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCC
Q 009999 147 RQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGL 226 (520)
Q Consensus 147 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH 226 (520)
.| ..+ + .+++.++.++.+++ ++++|++++++|
T Consensus 109 ------------~~-------------------------~~~-~---------~~~~~~~~g~~~~~-~~~~v~~~p~~H 140 (320)
T 1y44_A 109 ------------TH-------------------------LTY-P---------LAIQEIEEGIVFED-DQFIVTAVSVIH 140 (320)
T ss_dssp ------------CC-------------------------CSS-C---------EEEEECCSEEEEEC-SSEEEEEEECBS
T ss_pred ------------cC-------------------------CCC-c---------eEEEEcCCCceEec-CCEEEEEEEccC
Confidence 00 001 1 14556666777887 579999999999
Q ss_pred CCccEEEEEEe--------------------------------------------------CCeEEEEecCCCCCCCCCC
Q 009999 227 DIGACNWIISG--------------------------------------------------AKGNIAYISGSNFASGHAM 256 (520)
Q Consensus 227 ~lGs~~~~I~~--------------------------------------------------~~~~i~Y~sgD~~~~~~~~ 256 (520)
..++++|+++. ++++|+| |||++.....
T Consensus 141 ~~~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~-sgDt~~~~~~- 218 (320)
T 1y44_A 141 GVEAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVF-SGDTRVSDKL- 218 (320)
T ss_dssp SSSBEEEEEEECCBCCCC--------------------------------------CCCCBCCCEEEE-CCSCBCCHHH-
T ss_pred CCCcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEE-eCCCCCHHHH-
Confidence 99999999974 4678999 9999754311
Q ss_pred ccccccCCCCCEEEEcCCCCCCCcccCCCCccccCCC
Q 009999 257 DFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDNN 293 (520)
Q Consensus 257 ~~~~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~~ 293 (520)
.+.++++|+||+ |+||++..
T Consensus 219 ---~~~~~~~D~li~--------------E~t~~~~~ 238 (320)
T 1y44_A 219 ---KELARDCDVMVH--------------EATFAKED 238 (320)
T ss_dssp ---HHHTTTCSEEEE--------------ECCBCTTC
T ss_pred ---HHHhCCCCEEEE--------------eccCCcch
Confidence 234679999999 89998754
No 13
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.76 E-value=1.8e-18 Score=173.34 Aligned_cols=173 Identities=19% Similarity=0.203 Sum_probs=124.5
Q ss_pred CeEEEcCCCCCCC----CCCeEEEEE----CCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcc
Q 009999 1 MKFTCLCQGGGFN----FPPCHILNV----SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAN 72 (520)
Q Consensus 1 mkl~~lGg~~~~~----~~sc~ll~~----~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (520)
|+|++||++++.+ +++|++|+. ++..||||||.+....
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~---------------------------------- 47 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQ---------------------------------- 47 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHH----------------------------------
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHH----------------------------------
Confidence 8999999984333 369999998 8899999999874210
Q ss_pred cccccccccccccccccccCCcccEEEecCC--CCCCchhhhhccc---C--CceeEEEeHHHHHHHHHHHHHHHHHHHh
Q 009999 73 DLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRME---G--FSAKIYITEAAARIGQLMMEELICMNME 145 (520)
Q Consensus 73 ~l~~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~---~--~~~~Iy~T~~T~~l~~~~l~d~~~~~~~ 145 (520)
+ . ...++..+||+|||||. ||++|||.|.+.. + ...+||+++.+.++.+..+... .
T Consensus 48 -l-~----------~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~----~- 110 (306)
T 2cbn_A 48 -L-L----------HTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRIS----G- 110 (306)
T ss_dssp -H-H----------TSCCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEEESTTHHHHHHHHHHHT----T-
T ss_pred -H-H----------HhCCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEEcCccHHHHHHHHHHhh----c-
Confidence 1 0 01124568999999999 9999999887521 1 3568999999987654332210 0
Q ss_pred hhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecC
Q 009999 146 YRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 225 (520)
Q Consensus 146 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aG 225 (520)
. ...+ + .+++.+..++.+++ ++++|+++++-
T Consensus 111 ------------------------------------~--~~~~-~---------~~~~~~~~g~~~~~-~~~~v~~~~~~ 141 (306)
T 2cbn_A 111 ------------------------------------S--WTDY-P---------LEIVEIGAGEILDD-GLRKVTAYPLE 141 (306)
T ss_dssp ------------------------------------C--CCSS-C---------EEEEECCSEEEEEC-SSEEEEEEECB
T ss_pred ------------------------------------c--CCCc-e---------EEEEEcCCCcEeec-CCEEEEEEEcc
Confidence 0 0011 1 14566666777887 58999999999
Q ss_pred CCCccEEEEEEe--------------------------------------------------CCeEEEEecCCCCCCCCC
Q 009999 226 LDIGACNWIISG--------------------------------------------------AKGNIAYISGSNFASGHA 255 (520)
Q Consensus 226 H~lGs~~~~I~~--------------------------------------------------~~~~i~Y~sgD~~~~~~~ 255 (520)
|..++.+|+|+. ++++|+| |||+.+....
T Consensus 142 H~~~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~-sgDt~~~~~~ 220 (306)
T 2cbn_A 142 HPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAI-FGDTGPCDAA 220 (306)
T ss_dssp SSSCCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEE-CCSCBSCSTH
T ss_pred CCCCccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEE-eCCCCCHHHH
Confidence 999999999974 4678999 9999764321
Q ss_pred CccccccCCCCCEEEEcCCCCCCCcccCCCCccccCC
Q 009999 256 MDFDYRAIQGSDLILYSDLSSLDSTEDIDQSSFSDDN 292 (520)
Q Consensus 256 ~~~~~~~~~~~DvLI~~~~~~~~~~~~~~~estyg~~ 292 (520)
.+.++++|+||+ |+||++.
T Consensus 221 ----~~~~~~~D~li~--------------E~t~~~~ 239 (306)
T 2cbn_A 221 ----LDLAKGVDVMVH--------------EATLDIT 239 (306)
T ss_dssp ----HHHHTTCSEEEE--------------ECCBCGG
T ss_pred ----HHHhcCCCEEEE--------------ECcCChh
Confidence 234578999999 8999764
No 14
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.73 E-value=1.5e-17 Score=171.24 Aligned_cols=90 Identities=22% Similarity=0.221 Sum_probs=67.9
Q ss_pred CeEEEcCCCCCCC----CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccc
Q 009999 1 MKFTCLCQGGGFN----FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIF 76 (520)
Q Consensus 1 mkl~~lGg~~~~~----~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 76 (520)
|+|++||++++.+ +.+|++|+.++..+|||||.+.... +
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~-----------------------------------l-- 43 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQ-----------------------------------L-- 43 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHH-----------------------------------H--
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHH-----------------------------------H--
Confidence 9999999884433 5899999999999999999774310 1
Q ss_pred cccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCC---------ceeEEEeHHHHHHHHHHH
Q 009999 77 AEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGF---------SAKIYITEAAARIGQLMM 136 (520)
Q Consensus 77 ~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~---------~~~Iy~T~~T~~l~~~~l 136 (520)
....++..+||+|||||. ||++|||.|....++ ..+||++..+.+..+..+
T Consensus 44 ---------~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~~~l~iygp~~~~~~l~~~l 105 (368)
T 3zwf_A 44 ---------MKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTM 105 (368)
T ss_dssp ---------HHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------CCEEEEEETTHHHHHHHHH
T ss_pred ---------HHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCCCCeEEEEcHHHHHHHHHHH
Confidence 001234568999999999 999999988763221 468999999988665443
No 15
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.72 E-value=1.6e-17 Score=163.42 Aligned_cols=159 Identities=20% Similarity=0.151 Sum_probs=116.8
Q ss_pred CeEEEcCCCCCCC----CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccc
Q 009999 1 MKFTCLCQGGGFN----FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIF 76 (520)
Q Consensus 1 mkl~~lGg~~~~~----~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 76 (520)
|+|++||++++.+ +.+|++|+.++..||+|||..... .|..
T Consensus 25 m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~-----------------------------------~l~~ 69 (268)
T 1zkp_A 25 MKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLA-----------------------------------QLQK 69 (268)
T ss_dssp EEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHH-----------------------------------HHTT
T ss_pred cEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHH-----------------------------------HHHH
Confidence 7999999873332 589999999999999999987321 0100
Q ss_pred cccccccccccccccCCcccEEEecCC--CCCCchhhhhccc---------CCceeEEEeHHHHHHHHHHHHHHHHHHHh
Q 009999 77 AEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRME---------GFSAKIYITEAAARIGQLMMEELICMNME 145 (520)
Q Consensus 77 ~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~---------~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~ 145 (520)
. ++..+||+|||||. ||++|++.+.+.. .-..+||+++.+.+..+ ..
T Consensus 70 -----------~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~----~~------ 127 (268)
T 1zkp_A 70 -----------Y-ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPELPIYGHTFDENGFH----SL------ 127 (268)
T ss_dssp -----------T-CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCCEEEEECSSSHHHHH----TT------
T ss_pred -----------h-CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCceEEEeCccHHHHHH----hc------
Confidence 1 24557999999999 9999999887631 22579999988865321 10
Q ss_pred hhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecC
Q 009999 146 YRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSG 225 (520)
Q Consensus 146 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aG 225 (520)
.|.+. ..+..+..++.+++ ++++|+++++.
T Consensus 128 -----------------------------------------~~~~~--------~~~~~~~~g~~~~~-g~~~v~~~~~~ 157 (268)
T 1zkp_A 128 -----------------------------------------THEPH--------TKGIPYNPEETLQI-GPFSISFLKTV 157 (268)
T ss_dssp -----------------------------------------CBTTT--------EEEEECCTTSCEEE-TTEEEEEEECC
T ss_pred -----------------------------------------ccCCc--------cceEEecCCCeEEE-CCEEEEEEECC
Confidence 00000 13456677888888 58999999999
Q ss_pred CCCccEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEE
Q 009999 226 LDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY 271 (520)
Q Consensus 226 H~lGs~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~ 271 (520)
|..|+++|+|+.++++++| |||+...... .+.++++|+||+
T Consensus 158 H~~~~~~~~i~~~~~~i~~-~GD~~~~~~~----~~~~~~~d~li~ 198 (268)
T 1zkp_A 158 HPVTCFAMRITAGNDIVVY-SADSSYIPEF----IPFTKDADLFIC 198 (268)
T ss_dssp SSSCCEEEEEEETTEEEEE-CCSCCCCTTH----HHHHTTCSEEEE
T ss_pred CCCCceEEEEEECCeEEEE-eCCCCCCHHH----HHHHcCCCEEEE
Confidence 9999999999999999999 9999753221 123568999999
No 16
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.70 E-value=1.5e-17 Score=162.89 Aligned_cols=158 Identities=13% Similarity=0.110 Sum_probs=113.7
Q ss_pred CeEEEcCCCCCC----------------------CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCcc
Q 009999 1 MKFTCLCQGGGF----------------------NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSD 58 (520)
Q Consensus 1 mkl~~lGg~~~~----------------------~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~ 58 (520)
|+|++||+|++. -+.+|++|+.++..||||||...-.
T Consensus 3 ~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~~~--------------------- 61 (258)
T 3g1p_A 3 LTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLA--------------------- 61 (258)
T ss_dssp EEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTTHH---------------------
T ss_pred eEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchHHH---------------------
Confidence 789999998433 1478999999999999999943100
Q ss_pred ccccccccCCCCcccccccccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHH
Q 009999 59 SQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMM 136 (520)
Q Consensus 59 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l 136 (520)
. .++..+||+|||||. ||++|++.+....+...+||+++.+..+
T Consensus 62 -----------------~------------~~~~~~id~IliTH~H~DHi~gl~~l~~~~~~~~~v~~~~~~~~~----- 107 (258)
T 3g1p_A 62 -----------------D------------RWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPPDEQGC----- 107 (258)
T ss_dssp -----------------H------------HCCTTSSCEEECSCCCHHHHGGGTTTTTCSSSCEEEEECCCSSCS-----
T ss_pred -----------------h------------hcCcccCCEEEEccCchhHhCCHHHHhccCCCCeEEEeChhhhhH-----
Confidence 0 013457999999999 9999999986533445899999877521
Q ss_pred HHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCC
Q 009999 137 EELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI 216 (520)
Q Consensus 137 ~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~ 216 (520)
.+. + + .+.+. .....+..++.+++ ++
T Consensus 108 ~~~----------~------------------------------~---~~~~~----------~~~~~~~~g~~~~~-g~ 133 (258)
T 3g1p_A 108 DDL----------F------------------------------K---HPGLL----------DFSHTVEPFVVFDL-QG 133 (258)
T ss_dssp TTT----------T------------------------------T---SCTTE----------EEEEECCTTCCEEE-TT
T ss_pred HHH----------h------------------------------c---CCCcc----------ccccccCCCCeEEE-CC
Confidence 000 0 0 00010 11246677889999 58
Q ss_pred EEEEEEecCCCCccEEEEEEeCCeEEEEecCCCCCCCCCCccccccC--CCCCEEEE
Q 009999 217 LIIKAFSSGLDIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAI--QGSDLILY 271 (520)
Q Consensus 217 ~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~--~~~DvLI~ 271 (520)
++|+++++.|..|+++|+|+.++++++| |||+...... ..+.+ .++|+||+
T Consensus 134 ~~v~~~~~~H~~~~~g~~i~~~~~~i~~-~GDt~~~~~~---~~~~l~~~~~Dlli~ 186 (258)
T 3g1p_A 134 LQVTPLPLNHSKLTFGYLLETAHSRVAW-LSDTAGLPEK---TLKFLRNNQPQVMVM 186 (258)
T ss_dssp EEEEEEECCSSSCCEEEEEECSSCEEEE-ECSCSSCCHH---HHHHHHHTCCSEEEE
T ss_pred EEEEEEECCCCCCceEEEEEeCCcEEEE-ECCCCCCCHH---HHHHHHhCCCCEEEE
Confidence 9999999999999999999999999999 9999753211 01223 68999999
No 17
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.63 E-value=1.7e-16 Score=160.30 Aligned_cols=176 Identities=14% Similarity=0.082 Sum_probs=117.1
Q ss_pred CeEEEcCCCCCC--C----------------------CCCeEEEEECCEE-EEEeCCCCCccccccCCCCcccccccccC
Q 009999 1 MKFTCLCQGGGF--N----------------------FPPCHILNVSGFH-VLFDCPLDLSALTVFSPLPNDFYKAICKE 55 (520)
Q Consensus 1 mkl~~lGg~~~~--~----------------------~~sc~ll~~~~~~-iLlDcG~~~~~~~~f~p~~~~~~~~~~~~ 55 (520)
||+++||+|++. | +++|++|+.++.+ ||||||.+..... .
T Consensus 3 M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~~l--------~------- 67 (321)
T 3jxp_A 3 MYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRAQL--------Q------- 67 (321)
T ss_dssp EEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHHHH--------H-------
T ss_pred EEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHHHH--------H-------
Confidence 789999987221 1 2679999998886 9999998754210 0
Q ss_pred CccccccccccCCCCcccccccccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHH
Q 009999 56 NSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQ 133 (520)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~ 133 (520)
. ..... ....++..+||+|||||. ||++|||.|.+ +...+||+++.+.+..+
T Consensus 68 --------------------~-~~~l~---~~~~~~~~~i~~i~lTH~H~DH~~gl~~l~~--~~~~~vy~~~~~~~~l~ 121 (321)
T 3jxp_A 68 --------------------A-FAPMQ---PARALRDTGINAIVLLDSQIDHTTGLLSLRE--GCPHQVWCTDMVHQDLT 121 (321)
T ss_dssp --------------------T-CGGGC---CCSSSSCCSEEEEECSCCCHHHHGGGGGGGG--GCCEEEEECHHHHHHTT
T ss_pred --------------------h-ccccc---ccccCCcccCCEEEECCCChhhhhhHHHHHh--cCCCeEEECHHHHHHHH
Confidence 0 00000 001235678999999999 99999999965 45789999999876533
Q ss_pred HHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEe
Q 009999 134 LMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACY 213 (520)
Q Consensus 134 ~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l 213 (520)
..+. .+.... . .+.. -.++.++.++++++
T Consensus 122 ~~~~-~f~~~~------------------------------------~-----~~~~---------i~~~~i~~g~~~~i 150 (321)
T 3jxp_A 122 TGFP-LFNMLS------------------------------------H-----WNGG---------LQWNRIELEGSFVI 150 (321)
T ss_dssp TTSC-HHHHHT------------------------------------T-----TTTC---------EEEEECCSSSCEEC
T ss_pred hhCc-cccccc------------------------------------c-----ccCc---------eeEEEcCCCCeEEe
Confidence 1110 000000 0 0000 13566777888988
Q ss_pred --CCCEEEEEEecC--------CC-----CccEEEEEE--eCCeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 214 --NGILIIKAFSSG--------LD-----IGACNWIIS--GAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 214 --~~~~~i~~~~aG--------H~-----lGs~~~~I~--~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
.++++|+++++. |. ..+++|+|+ .++++++| +||++.... .-.+.++++|+||++
T Consensus 151 ~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y-~~Dt~~~~~---~~~~~~~~~D~li~e 222 (321)
T 3jxp_A 151 DACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFY-APGLGQVDE---KLLAMMHGADCLLVD 222 (321)
T ss_dssp TTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEE-ESSCCCCCH---HHHHHHHHCSEEEEE
T ss_pred ccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEE-ECCCCCCCH---HHHHHhcCCCEEEEe
Confidence 237999999997 65 479999999 88999999 999864211 112346689999994
No 18
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.63 E-value=4.4e-16 Score=155.35 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=86.0
Q ss_pred cCCcccEEEecCC--CCCCchhhhhccc---CCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhH
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRME---GFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 165 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~---~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~ 165 (520)
+..+||+|||||. ||++|||.|.+.. +...+||+++.+.+..+..+.. .+. .|.
T Consensus 96 ~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~----------~~~-------~~~---- 154 (293)
T 3md7_A 96 GVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGY----------CFE-------TPV---- 154 (293)
T ss_dssp TCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGG----------GTS-------CCT----
T ss_pred CCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhh----------hhc-------ccc----
Confidence 3468999999999 9999999886521 4468999999987654321110 000 000
Q ss_pred hhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCC----EEEEEEecCCC-CccEEEEEEeCCe
Q 009999 166 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI----LIIKAFSSGLD-IGACNWIISGAKG 240 (520)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~----~~i~~~~aGH~-lGs~~~~I~~~~~ 240 (520)
+ ..+.+. .+++.++.++.++++ + ++|+++++.|. .++++|+|+
T Consensus 155 ----------------~---~~~~~~--------~~~~~l~~g~~~~~g-~~~~~~~v~~~~~~H~~~~~~g~~i~---- 202 (293)
T 3md7_A 155 ----------------G---SSYPPI--------LSMHDIAPETPFSIE-GAGGAIRFEPFSQVHGDIESLGFRIG---- 202 (293)
T ss_dssp ----------------T---CCCCCC--------EEEEECCTTCCEEEC-CTTCCEEEEEEEEEETTEEEEEEEET----
T ss_pred ----------------c---cCCCCc--------eEEEEcCCCCcEEEC-CCCCcEEEEEEEecCCCCCEEEEEEe----
Confidence 0 011110 246677788999994 7 99999999998 799999998
Q ss_pred EEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 241 NIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 241 ~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
+++| |||+..... .-.+.++++|+||++
T Consensus 203 ~~~y-~gDt~~~~~---~~~~~~~~~Dlli~e 230 (293)
T 3md7_A 203 SVVY-CTDVSAFPE---QSLQYIKDADVLIIG 230 (293)
T ss_dssp TEEE-ECSCSBCCG---GGHHHHTTCSEEEEE
T ss_pred EEEE-ECCCCCCCH---HHHHHhcCCCEEEEe
Confidence 8999 999963211 112356799999994
No 19
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.62 E-value=4.4e-16 Score=153.66 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=109.6
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|+.+..+ ...+|+++ ++..||||||...... +
T Consensus 1 m~i~~~~~g---~~~~~~~i--~~~~iLiD~G~~~~~~-----------------------------------l------ 34 (280)
T 2e7y_A 1 MNIIGFSKA---LFSTWIYY--SPERILFDAGEGVSTT-----------------------------------L------ 34 (280)
T ss_dssp CCEEEEEET---TTEEEEEE--GGGTEEEEECTTHHHH-----------------------------------H------
T ss_pred CEEEEEecC---CceEEEEE--CCcEEEEECCcchHHH-----------------------------------h------
Confidence 788888554 24466666 5789999999873210 0
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhc----ccC---CceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTR----MEG---FSAKIYITEAAARIGQLMMEELICMNMEYRQFYG 151 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~----~~~---~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~ 151 (520)
..+..+||+|||||. ||++|||.|.. .++ -..+||+++.+. ..+..+.....+ +
T Consensus 35 --------~~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~--------~ 97 (280)
T 2e7y_A 35 --------GSKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFYPEGNR-AVEEYTEFIKRA--------N 97 (280)
T ss_dssp --------GGGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEEETTCH-HHHHHHHHHHHH--------C
T ss_pred --------ccCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEECccHH-HHHHHHHHHhhc--------c
Confidence 013457999999999 99999999852 121 247999999987 544332221000 0
Q ss_pred CCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCC----CEEEEEEecCCC
Q 009999 152 AEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNG----ILIIKAFSSGLD 227 (520)
Q Consensus 152 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~----~~~i~~~~aGH~ 227 (520)
+ . . .+ + ..++.++.++.+++++ +++|++++++|.
T Consensus 98 ------------------~-----------~--~-~~-~---------~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~ 135 (280)
T 2e7y_A 98 ------------------P-----------D--L-RF-S---------FNVHPLKEGERVFLRNAGGFKRYVQPFRTKHV 135 (280)
T ss_dssp ------------------G-----------G--G-TT-T---------EEEEEECTTCCEECCCSSCSCEEEEEEECCSC
T ss_pred ------------------c-----------C--C-CC-c---------eEEEEcCCCCEEEeCCcccCCEEEEEEEccCC
Confidence 0 0 0 00 0 1466778889999953 799999999999
Q ss_pred Cc--cEEEEEEe---------------------------------CCeEEEEecCCCCCCCCCCccccccCCCCCEEEE
Q 009999 228 IG--ACNWIISG---------------------------------AKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY 271 (520)
Q Consensus 228 lG--s~~~~I~~---------------------------------~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~ 271 (520)
.| +++|+|+. ++++|+| |||+... ..+.++++|+||+
T Consensus 136 ~~~~~~g~~i~~~~~~l~~~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~y-sgDt~~~------~~~~~~~~d~li~ 207 (280)
T 2e7y_A 136 SSEVSFGYHIFEVRRKLKKEFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTI-SGDSLAL------DPEEIRGTELLIH 207 (280)
T ss_dssp SSSCCEEEEEEEEEEEECGGGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEE-CCSCSSC------CHHHHTTCSCEEE
T ss_pred CCCceEEEEEEEcccccCHhhcCCCHHHHHHHHhhcCCceecCCccCCEEEE-ECCCChH------HHHhhcCCCEEEE
Confidence 99 99999973 3578999 9999754 1234678999999
No 20
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.48 E-value=6.8e-13 Score=127.87 Aligned_cols=139 Identities=12% Similarity=0.144 Sum_probs=102.2
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|+++| .+|++|+.++.+||+|||..... +
T Consensus 30 ~~it~lg-------~s~~li~~~~~~iliDpg~~~~~------------------------------------~------ 60 (235)
T 3kl7_A 30 LTITFIK-------HGSLMLTYDNHSIQVDPVSEYAD------------------------------------Y------ 60 (235)
T ss_dssp EEEEEEE-------TTEEEEEETTEEEEESCCTTTCC------------------------------------T------
T ss_pred eEEEEEc-------ceEEEEEECCEEEEECCCCCccc------------------------------------h------
Confidence 4555554 47999999999999999976221 0
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
.+..++|+|||||. ||+ +++.+......+.+||++..+.+..
T Consensus 61 ---------~~~~~id~VliTH~H~DH~-~~~~l~~~~~~~~~v~~~~~~~~~l-------------------------- 104 (235)
T 3kl7_A 61 ---------TTFPKADIILITHEHGDHL-DPKAIQAVEKSDTEIIANENSQKKL-------------------------- 104 (235)
T ss_dssp ---------TSSCCCSEEEECCSSTTTC-CHHHHHHHCCTTCEEEECHHHHHHH--------------------------
T ss_pred ---------hhCCCCCEEEECCCccccC-CHHHHHHhhcCCCEEEEcHHHHHHh--------------------------
Confidence 02347999999999 999 5666654234578999998775421
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCC-eEEeCCCEEEEEEecCCCCc--------
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGE-EACYNGILIIKAFSSGLDIG-------- 229 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~-~~~l~~~~~i~~~~aGH~lG-------- 229 (520)
.+...+..++ .+++ ++++|+++++-|..+
T Consensus 105 -----------------------------------------~~~~~l~~g~~~~~~-g~~~i~~~p~~H~~~~~~~~~~~ 142 (235)
T 3kl7_A 105 -----------------------------------------GKGKVLKNGDTDTSI-SYMKIEAVPAYNTTPGRDKYHPR 142 (235)
T ss_dssp -----------------------------------------TCSEECCTTCEECCS-TTCEEEEEECCCCSTTGGGTSCT
T ss_pred -----------------------------------------cCcEEecCCCEEEEE-CCEEEEEEEeecCCCccccccCC
Confidence 1234456677 7788 589999999998652
Q ss_pred --cEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 230 --ACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 230 --s~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
+++|+|+.++++++| +||++.... ...+.++|+++++
T Consensus 143 ~~~~g~~i~~~g~~i~~-~GDt~~~~~-----~~~l~~~Dv~il~ 181 (235)
T 3kl7_A 143 HRDNGYILTFDGLRVYI-AGDTEDIPE-----MKDLKDIDIAFLP 181 (235)
T ss_dssp TTSEEEEEEETTEEEEE-CCSCCSCGG-----GGGCCSCSEEEEE
T ss_pred CCceEEEEEeCCeEEEE-ECCCCchhh-----HHhhcCCCEEEEC
Confidence 589999999999999 999976432 2335689999994
No 21
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.35 E-value=7.3e-12 Score=123.09 Aligned_cols=111 Identities=8% Similarity=-0.041 Sum_probs=76.2
Q ss_pred cccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHh
Q 009999 89 LWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEEL 166 (520)
Q Consensus 89 ~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 166 (520)
++++.+||+|+|||. ||+||++.+ .+.+||+++.+.+........ ..
T Consensus 98 g~~~~~i~~VilTH~H~DH~gg~~~~-----~~~~v~~~~~~~~~~~~~~~~----~~---------------------- 146 (276)
T 2r2d_A 98 GLSPDDISTVVLSHLHNDHAGCVEYF-----GKSRLIAHEDEFATAVRYFAT----GD---------------------- 146 (276)
T ss_dssp TCCGGGCSEEECSCCSTTTSTTGGGC-----SSSEEEEEHHHHHHHHHHHHT----TC----------------------
T ss_pred CCCHHHCCEEEecCcccccCCChhhC-----CCCEEEECHHHHHHHhccccc----cc----------------------
Confidence 456678999999999 999999987 257999999887643221100 00
Q ss_pred hhchhhhhhhhccCCCCCCCCCCchHHHHHHH---Hhhceeec-cCCeEEeCCCEEEEEE-ecCCCCccEEEEEEeCC-e
Q 009999 167 ELLPSALRKIALGEDGSELGGGCPCIAHVKDC---ISKVQTLR-FGEEACYNGILIIKAF-SSGLDIGACNWIISGAK-G 240 (520)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~---~~~i~~~~-y~~~~~l~~~~~i~~~-~aGH~lGs~~~~I~~~~-~ 240 (520)
. ...|. ..++... -.+++.+. .++.+++.+++++... + ||..|++++.++.++ +
T Consensus 147 ---------------~--~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~l~~~~~v~~~~p-gHt~g~~~~~~~~~~~~ 206 (276)
T 2r2d_A 147 ---------------H--SSPYI--VKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGT-GHASGMLGLAVRLEKQP 206 (276)
T ss_dssp ---------------C--SSSSC--HHHHHHHTTSCCCEEEECTTCCEEEEETTEEEEEEES-SSSSSEEEEEEECSSSC
T ss_pred ---------------c--ccccc--hHHhhhhccccccceeccCCCceeEecCCEEEEeCCC-CCCceeEEEEEEcCCCc
Confidence 0 00010 1111111 02355666 4788888657999999 6 999999999999877 8
Q ss_pred EEEEecCCCCC
Q 009999 241 NIAYISGSNFA 251 (520)
Q Consensus 241 ~i~Y~sgD~~~ 251 (520)
+++| +||...
T Consensus 207 ~vl~-~GD~~~ 216 (276)
T 2r2d_A 207 GFLL-VSDACY 216 (276)
T ss_dssp EEEE-EETTSC
T ss_pred eEEE-Eechhh
Confidence 9999 999854
No 22
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.30 E-value=1.1e-12 Score=125.04 Aligned_cols=153 Identities=14% Similarity=0.086 Sum_probs=97.1
Q ss_pred CeEEEcCCCCCC--------CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcc
Q 009999 1 MKFTCLCQGGGF--------NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDAN 72 (520)
Q Consensus 1 mkl~~lGg~~~~--------~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (520)
|+++|+|.+|.- ...+|++|+.++..||+|||..... ..
T Consensus 13 ~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~~--------~~------------------------- 59 (221)
T 1ztc_A 13 MELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSSM--------DE------------------------- 59 (221)
T ss_dssp EEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGGH--------HH-------------------------
T ss_pred eeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcch--------HH-------------------------
Confidence 788898887221 1468999999999999999985210 00
Q ss_pred cccccccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhc
Q 009999 73 DLIFAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFY 150 (520)
Q Consensus 73 ~l~~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~ 150 (520)
+...+ ...++++.+|++|++||. ||++|++.+. +.+||+++. . . .+.+ +
T Consensus 60 -l~~~l-------~~~g~~~~~i~~ViiTH~H~DH~gg~~~~~-----~~~v~~~~~-~--~----~~~~---~------ 110 (221)
T 1ztc_A 60 -LEEKF-------SELGISPDDITDVLFTHVHLDHIFNSVLFE-----NATFYVHEV-Y--K----TKNY---L------ 110 (221)
T ss_dssp -HHHHH-------HHHTCCGGGCCEEECSCCCHHHHGGGGGCT-----TCEEEEEGG-G--G----GSCG---G------
T ss_pred -HHHHH-------HHcCCCHHHCcEEEEcCCccccCCchhhCC-----CCEEEEeHH-H--h----hhhh---h------
Confidence 00000 112345668999999999 9999999874 479999987 1 1 1100 0
Q ss_pred CCCCCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCcc
Q 009999 151 GAEESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGA 230 (520)
Q Consensus 151 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs 230 (520)
.|.... . .....+.....++..++.++.+.. +++++...+ ||..|+
T Consensus 111 --------~~~~~~--~----------------------~~~~~~~~~~~~~~~~~~g~~l~~-~~~~v~~~p-GHt~g~ 156 (221)
T 1ztc_A 111 --------SFGTIV--G----------------------RIYSKVISSWKNVVLLKGEESLFD-EKVKVFHTP-WHAREH 156 (221)
T ss_dssp --------GGCHHH--H----------------------HHHHHHHHTCCSEEEECSCCEETT-TTEEEEECC-SSSTTC
T ss_pred --------hhccch--h----------------------hhhhhccccccceEEeCCCCEEEC-CeEEEEEcC-CCCccc
Confidence 000000 0 000000000024556666666542 379998888 999999
Q ss_pred EEEEEEeCC-eEEEEecCCCC
Q 009999 231 CNWIISGAK-GNIAYISGSNF 250 (520)
Q Consensus 231 ~~~~I~~~~-~~i~Y~sgD~~ 250 (520)
+++.++.++ ++++| |||+.
T Consensus 157 ~~~~~~~~~~~~vlf-tGD~~ 176 (221)
T 1ztc_A 157 LSFLLDTENAGRVLI-TGDIT 176 (221)
T ss_dssp EEEEEEETTTEEEEE-CGGGS
T ss_pred EEEEEEcCCCCeEEE-EeCcc
Confidence 999999876 78999 99984
No 23
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.30 E-value=1.5e-11 Score=120.40 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=103.7
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+||.+|. +|++|+.++.+||+|+++.-... +.+. .+.. + ..+ . .|.
T Consensus 5 m~it~lGh-------a~~li~~~g~~iLiDp~~s~~~~--~~~~-~~~~-----------------~----~~~-~-~~~ 51 (264)
T 3rpc_A 5 TQYTHIRN-------ATGKLTIKNTTFLIDPFLAPKDT--YPGF-EGTF-----------------N----YQQ-R-MPM 51 (264)
T ss_dssp CEEEEEET-------TEEEEEETTEEEEESCCCCCTTC--BCCC-TTBT-----------------T----TTS-C-BSS
T ss_pred EEEEEEeC-------cEEEEEECCEEEEeCcccCCCcC--ccCC-CCcc-----------------c----ccc-c-CCC
Confidence 78888864 68999999999999998764211 0000 0000 0 000 0 000
Q ss_pred ccccccccccc----CCcccEEEecCC--CCCCchhhhhcccCCceeEEEe-HHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 009999 81 YKTVNNLHLWN----VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYIT-EAAARIGQLMMEELICMNMEYRQFYGAE 153 (520)
Q Consensus 81 ~~~~~~~~~~~----~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T-~~T~~l~~~~l~d~~~~~~~~~~~~~~~ 153 (520)
. ...++ +.++|+|||||. ||+++++.+.. ..+.|||++ ..+.... ..
T Consensus 52 ~-----~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~~--~~~~~v~~~~~~~~~~l----~~--------------- 105 (264)
T 3rpc_A 52 V-----DLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINSI--PKSLPIFVQNTADKELI----TS--------------- 105 (264)
T ss_dssp S-----CCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHHS--CTTSCEEESSHHHHHHH----HH---------------
T ss_pred C-----CCCCCHHHccccCCEEEECCCchhhCCCHHHHhh--ccCCeEEEeCHHHHHHH----Hh---------------
Confidence 0 00111 137999999999 99999988876 346899999 6654421 11
Q ss_pred CCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCc----
Q 009999 154 ESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIG---- 229 (520)
Q Consensus 154 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lG---- 229 (520)
.+ + .+++.+ ++.+++ ++++|+++++-|..+
T Consensus 106 ---------------------------~g-----~-----------~~~~~~--~~~~~~-~~~~i~~~pa~H~~~~~~~ 139 (264)
T 3rpc_A 106 ---------------------------QG-----F-----------IDVRII--FESLEF-NGITLRKTGGSHGTVEMYA 139 (264)
T ss_dssp ---------------------------TT-----C-----------SCEEEC--SSEEEE-TTEEEEEECCCSSCHHHHT
T ss_pred ---------------------------cC-----C-----------CeeEEe--cccEEE-CCEEEEEeccccCCccccc
Confidence 01 0 122333 578889 589999999999875
Q ss_pred ----------cEEEEEEeC-CeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 230 ----------ACNWIISGA-KGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 230 ----------s~~~~I~~~-~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
+++|+|+.+ +++|+| +||++....... .....++|+++++
T Consensus 140 ~p~~~~~~~~~~g~~i~~~~~~~i~~-~GDt~~~~~~~~--~~~~~~~Dv~il~ 190 (264)
T 3rpc_A 140 NPVLAPLAGDAMGVIFEAADEPTVYL-VGDTVWTSDVEK--ALLRFDPNVIIMN 190 (264)
T ss_dssp STTHHHHHCCCCEEEEECTTSCCEEE-CCSCCSCHHHHH--HHHHHCCSEEEEE
T ss_pred cccccccccccEEEEEEeCCccEEEE-ECCcCchHHHHH--HHHHhCCCEEEEe
Confidence 589999987 788888 999976432110 0011258999995
No 24
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.28 E-value=9.2e-12 Score=123.45 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=99.9
Q ss_pred EEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccc
Q 009999 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (520)
Q Consensus 3 l~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 82 (520)
++++|.. +.+|++|+.++..||+|||..... . .+.. ..
T Consensus 47 v~~~~~~----~~n~~li~~~~~~iLID~G~~~~~--------~--------------------------~~~~---~l- 84 (294)
T 3m8t_A 47 IYYVGTD----GIAVYVIKTSQGLILMDTAMPQST--------G--------------------------MIKD---NI- 84 (294)
T ss_dssp EEECCCS----SSCCEEEEETTEEEEECCCCGGGH--------H--------------------------HHHH---HH-
T ss_pred EEEeCCC----CeEEEEEEECCceEEEECCCchhH--------H--------------------------HHHH---HH-
Confidence 4455443 679999999999999999985211 0 0000 00
Q ss_pred cccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccc
Q 009999 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQW 160 (520)
Q Consensus 83 ~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w 160 (520)
...++++.+||+|+|||. ||+||++.|.+. ++.+||+++.+.+....... .+...
T Consensus 85 ---~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~------------~~~~~------ 141 (294)
T 3m8t_A 85 ---AKLGFKVADIKLILNTHAHLDHTGGFAEIKKE--TGAQLVAGERDKPLLEGGYY------------PGDEK------ 141 (294)
T ss_dssp ---HHTTCCGGGEEEEECSCCCHHHHTTHHHHHHH--HCCEEEEEGGGHHHHHHTCB------------TTBTT------
T ss_pred ---HHcCCCHHHCcEEEECCCCccccccHHHHhhc--cCCEEEEChHHHHHHhcccc------------cCccc------
Confidence 112335567999999999 999999999873 46799999998765321100 00000
Q ss_pred hhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEe-cCCCCccEEEEEEeCC
Q 009999 161 MKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISGAK 239 (520)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~-aGH~lGs~~~~I~~~~ 239 (520)
.. ...+.+. .....+..++.+.+ ++++|+++. .||..|+++|.++.++
T Consensus 142 ---------------------~~-~~~~~~~--------~~~~~~~~g~~~~~-g~~~i~~~~~pgHt~g~~~~~~~~~~ 190 (294)
T 3m8t_A 142 ---------------------NE-DLAFPAV--------KVDRAVKEGDRVTL-GDTTLTAHATPGHSPGCTSWEMTVKD 190 (294)
T ss_dssp ---------------------CG-GGCCCCC--------CCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEE
T ss_pred ---------------------cc-cCCCCCC--------CCceEeCCCCEEEe-CCEEEEEEeCCCCCccCEEEEEEccC
Confidence 00 0001111 12356778899999 579999887 6799999999998655
Q ss_pred e----EEEEecCCCC
Q 009999 240 G----NIAYISGSNF 250 (520)
Q Consensus 240 ~----~i~Y~sgD~~ 250 (520)
+ +++| +||..
T Consensus 191 ~~~~~~~lf-~GD~~ 204 (294)
T 3m8t_A 191 GKEDREVLF-FCSGT 204 (294)
T ss_dssp TTEEEEEEE-CCCCC
T ss_pred CCccceEEE-EcCcc
Confidence 4 8999 99985
No 25
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.27 E-value=5.9e-11 Score=121.59 Aligned_cols=117 Identities=15% Similarity=0.065 Sum_probs=80.3
Q ss_pred CCcccEEEecCC--CCCC--chhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhh
Q 009999 92 VSFIDVVLISSP--MGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g--~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (520)
..+||+|||||. ||++ ++..+.+...-..+||++..+.+..+ ..
T Consensus 107 l~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~~~~~l~----~~---------------------------- 154 (360)
T 2wyl_A 107 IRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWI----GW---------------------------- 154 (360)
T ss_dssp CCCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHHHHHHHH----HH----------------------------
T ss_pred cCCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHHHHHHHH----Hc----------------------------
Confidence 468999999999 9997 35555542212579999988765321 10
Q ss_pred hchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCC--------------------
Q 009999 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD-------------------- 227 (520)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~-------------------- 227 (520)
+ + +. .+++.+..++.+++ ++++|+++++.|.
T Consensus 155 --------------g-----~-~~--------~~~~~l~~g~~~~~-g~~~v~~~~~~H~~~~~~~~~~~h~~g~~~~~~ 205 (360)
T 2wyl_A 155 --------------G-----V-PK--------ERCIVVKPGDVVKV-KDIEIHALDAFDRTALITLPADQKAAGVLPDGM 205 (360)
T ss_dssp --------------T-----C-CG--------GGEEECCTTCEEEE-TTEEEEEEECCCC------------------CC
T ss_pred --------------C-----C-Ch--------heEEEcCCCCEEEE-CCEEEEEEeccCccccccccccccccccccccc
Confidence 0 0 00 25677888899999 4799999999764
Q ss_pred -CccEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 228 -IGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 228 -lGs~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
.++++|+|+.++++|+| +||+......... ....++|++++.
T Consensus 206 ~~~~~g~~i~~~g~~i~~-sGDt~~~~~~~~i--~~~~~~Dv~il~ 248 (360)
T 2wyl_A 206 DDRAVNYLFKTPGGSLYH-SGDSHYSNYYAKH--GNEHQIDVALGS 248 (360)
T ss_dssp TTTBEEEEEEETTEEEEE-CTTCCCCTTHHHH--HHHSCCCEEEEE
T ss_pred CcccEEEEEEECCcEEEE-eCCCCcCHHHHHH--hhCCCCCEEEec
Confidence 24899999999999999 9999764321111 111268999983
No 26
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.25 E-value=2.9e-12 Score=124.46 Aligned_cols=101 Identities=13% Similarity=0.087 Sum_probs=67.7
Q ss_pred cccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHh
Q 009999 89 LWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEEL 166 (520)
Q Consensus 89 ~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 166 (520)
++++.+||+|++||. ||+||++.+. +.+||+++.+.+.... . . . + ..
T Consensus 95 g~~~~~I~~VilTH~H~DH~gg~~~~~-----~~~i~~~~~~~~~~~~---~-----~---~-~----------~~---- 143 (254)
T 3dha_A 95 GYEPDDLLYIISSHLHFDHAGGNGAFT-----NTPIIVQRTEYEAALH---R-----E---E-Y----------MK---- 143 (254)
T ss_dssp TCCGGGCSEEECSCCSHHHHTTGGGCS-----SSCEEEEHHHHHHHHH---C-----T---T-S----------CG----
T ss_pred CCCHHHCCEEEcCCChhhcCCChHHCC-----CCEEEECHHHHHHhhc---c-----c---c-c----------cc----
Confidence 356667999999999 9999999874 4799999988764321 0 0 0 0 00
Q ss_pred hhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeC-CeEEEEe
Q 009999 167 ELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA-KGNIAYI 245 (520)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~-~~~i~Y~ 245 (520)
. . . .+. ..+..+. ++...+ +++++...+ ||..|++++.++.+ +++++|
T Consensus 144 --------~------~--~---~~~--------~~~~~~~-~~~~~~-~~i~~~~~p-GHt~g~~~~~~~~~~~~~vl~- 192 (254)
T 3dha_A 144 --------E------C--I---LPH--------LNYKIIE-GDYEVV-PGVQLLYTP-GHSPGHQSLFIETEQSGSVLL- 192 (254)
T ss_dssp --------G------G--S---CTT--------SCEEEEC-SSEEEE-TTEEEEECC-SSSTTCEEEEEEETTTEEEEE-
T ss_pred --------c------c--c---Ccc--------cceEEec-CCcccc-CCEEEEECC-CCCCCCEEEEEEeCCCCEEEE-
Confidence 0 0 0 000 0222222 444445 478888776 99999999999876 678999
Q ss_pred cCCCCC
Q 009999 246 SGSNFA 251 (520)
Q Consensus 246 sgD~~~ 251 (520)
|||+..
T Consensus 193 ~GD~~~ 198 (254)
T 3dha_A 193 TIDASY 198 (254)
T ss_dssp EETTCS
T ss_pred Eecccc
Confidence 999853
No 27
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.24 E-value=5.6e-11 Score=122.65 Aligned_cols=117 Identities=21% Similarity=0.136 Sum_probs=80.6
Q ss_pred CCcccEEEecCC--CCCC--chhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhh
Q 009999 92 VSFIDVVLISSP--MGML--GLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g--~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (520)
..+||+|||||. ||++ ++..+.+...-..+||++..+.+..+ ..
T Consensus 131 ~~~iD~IliTH~H~DHig~~~l~~l~~~~~~~~~v~~~~~~~~~l~----~~---------------------------- 178 (379)
T 3bv6_A 131 IKEIDAVLASHDHADHIDVNVAAAVLQNCGEHVKFIGPQACVDLWL----GW---------------------------- 178 (379)
T ss_dssp CCCCSEEECSBCSGGGCCHHHHHHHHHHSCTTCEEEECHHHHHHHH----HH----------------------------
T ss_pred CCCCCEEEECCCCcccCChHHHHHHHhcCCCCcEEEecHHHHHHHH----Hc----------------------------
Confidence 567999999999 9996 45555542212679999988755321 10
Q ss_pred hchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCC-------------C------
Q 009999 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLD-------------I------ 228 (520)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~-------------l------ 228 (520)
+ + +. .+++.+..++.+++ ++++|+++++.|. .
T Consensus 179 --------------g-----~-~~--------~~~~~l~~g~~~~~-g~~~v~~~~~~H~~~~~~~p~~h~~~~G~~~~~ 229 (379)
T 3bv6_A 179 --------------G-----V-PQ--------ERCIVAKVGDVLEI-GDVKIRVLDSFDRTALVTLPKGVSSYDKAILDG 229 (379)
T ss_dssp --------------T-----C-CG--------GGEEECCTTCEEEE-TTEEEEEEECCCHHHHTCCCTTSCSSCGGGGGC
T ss_pred --------------C-----C-Ch--------hhEEEeCCCCEEEE-CCEEEEEEecccccccccccccccccccccccc
Confidence 0 0 00 25677888999999 4899999999773 2
Q ss_pred ---ccEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 229 ---GACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 229 ---Gs~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
++++|+|+.++++|+| +||+......... ... .++|++++.
T Consensus 230 ~~~~~~g~~i~~~g~~i~~-sGDt~~~~~~~~i-~~~-~~~Dv~il~ 273 (379)
T 3bv6_A 230 MDERAVNYLIETSGGSVYH-SGDSHYSNYYAKH-GND-YQIDVALLS 273 (379)
T ss_dssp HHHHBEEEEEEETTEEEEE-CTTCCCCTTHHHH-HHH-SCCSEEEEE
T ss_pred cCCceEEEEEEeCCeEEEE-eCCCCccHHHHHH-hhc-CCCCEEEec
Confidence 3899999999999999 9999764321111 011 268999983
No 28
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.24 E-value=4.5e-12 Score=119.47 Aligned_cols=148 Identities=12% Similarity=0.115 Sum_probs=96.6
Q ss_pred CeEEEcCCCCCCCCCCeEEEEE--CCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNV--SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~--~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 78 (520)
|+++++-.+ ..+.+||+|+. ++..+|+|||.....+.. .| .
T Consensus 1 m~i~~~~~~--~~~~n~~li~~~~~~~~iLiD~G~~~~~l~~--------------------------------~l-~-- 43 (210)
T 2xf4_A 1 MNYRIIPVT--AFSQNCSLIWCEQTRLAALVDPGGDAEKIKQ--------------------------------EV-D-- 43 (210)
T ss_dssp CEEEEEEET--TTTEEEEEEECTTTCEEEEECCCSCHHHHHH--------------------------------HH-H--
T ss_pred CeEEEEeeC--CcccEEEEEEecCCCcEEEEcCCCCHHHHHH--------------------------------HH-H--
Confidence 778887654 45789999984 688999999964221100 01 0
Q ss_pred cccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 009999 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (520)
Q Consensus 79 p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 156 (520)
..+ .++++|++||. ||++|++.+.+.. ..+||+++.+.+.....+.... +.++
T Consensus 44 --------~~g---~~i~~ii~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~~~~~~~~~~-------~~~~----- 98 (210)
T 2xf4_A 44 --------ASG---VTLMQILLTHGHLDHVGAASELAQHY--GVPVIGPEKEDEFWLQGLPAQS-------RMFG----- 98 (210)
T ss_dssp --------HHT---CEEEEEECSCSCHHHHTTHHHHHHHH--TCCEECCCGGGHHHHHTHHHHH-------HHTT-----
T ss_pred --------HcC---CceeEEEECCCChhhhcCHHHHHHHc--CCcEEEecchHHHHhccchhhh-------hhcC-----
Confidence 011 14899999999 9999999998733 5799999888665432221110 0010
Q ss_pred CccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEE
Q 009999 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (520)
Q Consensus 157 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I 235 (520)
.+...+. .....+..++.+.+ ++.+++++.+ ||..|++++.+
T Consensus 99 ----------------------------~~~~~~~--------~~~~~~~~g~~~~~-g~~~i~~~~~pgHt~g~~~~~~ 141 (210)
T 2xf4_A 99 ----------------------------LDECQPL--------TPDRWLNDGDRVSV-GNVTLQVLHCPGHTPGHVVFFD 141 (210)
T ss_dssp ----------------------------CCCCCCC--------CCSBCCCTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred ----------------------------CcccCCC--------CCceEECCCCEEEE-CCeEEEEEECCCCCCCcEEEEe
Confidence 0000000 12344567888888 4788888754 89999999987
Q ss_pred EeCCeEEEEecCCCC
Q 009999 236 SGAKGNIAYISGSNF 250 (520)
Q Consensus 236 ~~~~~~i~Y~sgD~~ 250 (520)
+ +++++| |||+.
T Consensus 142 ~--~~~~lf-~GD~~ 153 (210)
T 2xf4_A 142 E--QSQLLI-SGDVI 153 (210)
T ss_dssp T--TTTEEE-EETSE
T ss_pred C--CCCEEE-ECCEe
Confidence 4 678999 99974
No 29
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.24 E-value=1.4e-11 Score=120.48 Aligned_cols=147 Identities=13% Similarity=0.062 Sum_probs=95.1
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
+.+||+|+.++..||||||..... . .+...+ ...++++.
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~~~--------~--------------------------~l~~~l-------~~~g~~~~ 62 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEANV--------P--------------------------MIKASI-------KKLGFKFS 62 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGGGH--------H--------------------------HHHHHH-------HHTTCCGG
T ss_pred CeEEEEEEeCCceEEEECCCcccH--------H--------------------------HHHHHH-------HHcCCCHH
Confidence 678999999999999999986210 0 000000 11233456
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 171 (520)
+|++|++||. ||+||++.+.+. ++.+||+++.+.+........ + ..|..
T Consensus 63 ~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~~----------------~--~~~~~--------- 113 (263)
T 1k07_A 63 DTKILLISHAHFDHAAGSELIKQQ--TKAKYMVMDEDVSVILSGGKS----------------D--FHYAN--------- 113 (263)
T ss_dssp GEEEEECSSSSHHHHTTHHHHHHH--HCCEEEEEHHHHHHHHTTTTT----------------C--TTTTT---------
T ss_pred HCcEEEeCCCCccccccHHHHHHh--cCCEEEEcHHHHHHHhccccc----------------c--cccCc---------
Confidence 7999999999 999999999873 357999999887653210000 0 00000
Q ss_pred hhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeC--C--eEEEEec
Q 009999 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGA--K--GNIAYIS 246 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~--~--~~i~Y~s 246 (520)
... ..+.+. .....+..++.+.+ ++++|+++.+ ||+.|+++|.++.. + .+++| +
T Consensus 114 ~~~-----------~~~~~~--------~~~~~~~~g~~~~~-g~~~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf-~ 172 (263)
T 1k07_A 114 DSS-----------TYFTQS--------TVDKVLHDGERVEL-GGTVLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVI-I 172 (263)
T ss_dssp CGG-----------GCCCCC--------CCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEEE-E
T ss_pred ccc-----------ccCCCC--------CcceEeCCCCEEEE-CCeEEEEEECCCCCCCcEEEEEecccCCceeEEEE-E
Confidence 000 001010 13456777888989 4788888664 89999999999864 4 38999 9
Q ss_pred CCCCC
Q 009999 247 GSNFA 251 (520)
Q Consensus 247 gD~~~ 251 (520)
||+..
T Consensus 173 GD~~~ 177 (263)
T 1k07_A 173 GSIGV 177 (263)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99753
No 30
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.21 E-value=1.4e-11 Score=121.64 Aligned_cols=160 Identities=12% Similarity=0.034 Sum_probs=94.3
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
+.+|++|+.++..||+|||....... ......+.. .....+.. .. ...++++.
T Consensus 47 ~~n~~lI~~~~~~iLID~G~~~~~~~------~~~~~~~~~--------------~~~~~l~~---~l----~~~g~~~~ 99 (280)
T 3esh_A 47 PTHPILIQTAQYNLIIDAGIGNGKLS------EKQLRNFGV--------------DEESHIIA---DL----ANYNLTPK 99 (280)
T ss_dssp ECCCEEEECSSCEEESCCTTCSSCSC------HHHHHHTTC--------------SSCCCHHH---HH----HTTTCCTT
T ss_pred eEEEEEEEECCEEEEEECCCCCcccc------cccccccCC--------------cccchHHH---HH----HHcCCCHH
Confidence 56899999999999999998743100 000000000 00000101 00 12345677
Q ss_pred cccEEEecCC--CCCCchhhhhcccCC-ceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhch
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~-~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 170 (520)
+||+|++||. ||+||++.|.+...| +++||+++.+.+... +.. ......+ |
T Consensus 100 ~Id~IllTH~H~DHigg~~~l~~~~~fp~a~i~~~~~~~~~~~----~~~--~~~~~~~----------~---------- 153 (280)
T 3esh_A 100 DIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFI----APN--IRSKSTY----------W---------- 153 (280)
T ss_dssp SCCEEECSCCCHHHHGGGSCTTSCCSSTTCEEEEEHHHHHHHH----SCC--TTGGGTS----------C----------
T ss_pred HCCEEEeCCCcccccCcccccccccCCCCCEEEECHHHHHHhh----Ccc--cccccch----------h----------
Confidence 8999999999 999999999763245 789999998765421 100 0000000 0
Q ss_pred hhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeCCeEEEEecCCCC
Q 009999 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF 250 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sgD~~ 250 (520)
...+.++ ..++..+ .+..++.+++++.. -.||+.|++++.++.++++++| |||+.
T Consensus 154 --------------~~~~~~~-------~~~~~~~--~~~~~l~~gi~~~~-~pGHt~g~~~~~i~~~~~~vlf-tGD~~ 208 (280)
T 3esh_A 154 --------------DKNKGDY-------SNKLILF--EKHFEPVPGIKMQH-SGGHSFGHTIITIESQGDKAVH-MGDIF 208 (280)
T ss_dssp --------------GGGCCGG-------GGGEEEE--SSEECSSTTEEEEE-CCSSSTTCEEEEEEETTEEEEE-CGGGS
T ss_pred --------------hhhhhhh-------hheEEEe--CCCCeEcCCEEEEE-cCCCCcccEEEEEEECCcEEEE-EEccC
Confidence 0001111 0233333 34445555688744 4799999999999999999999 99985
Q ss_pred C
Q 009999 251 A 251 (520)
Q Consensus 251 ~ 251 (520)
.
T Consensus 209 ~ 209 (280)
T 3esh_A 209 P 209 (280)
T ss_dssp C
T ss_pred C
Confidence 3
No 31
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.18 E-value=1.9e-11 Score=115.05 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=94.2
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPW 80 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ 80 (520)
|+|+++..+ ..+.+||+|+.++..+|+|||.....+. +.| .
T Consensus 1 M~i~~~~~g--~~~~n~~li~~~~~~iliD~G~~~~~l~--------------------------------~~l-~---- 41 (207)
T 2zwr_A 1 MRVFPVTLG--PLQENAYLVETGEGPVLIDPGDEPEKLL--------------------------------ALF-Q---- 41 (207)
T ss_dssp CEEEEEEET--TTTEEEEEEEETTEEEEECCCSCHHHHH--------------------------------HHH-H----
T ss_pred CeEEEEecC--CcccEEEEEEeCCcEEEEeCCCCHHHHH--------------------------------HHH-H----
Confidence 899999875 4689999999999999999997532110 001 0
Q ss_pred cccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 009999 81 YKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGP 158 (520)
Q Consensus 81 ~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~ 158 (520)
..+ .+|++|++||. ||++|++.+.+. ++.+||+++.+.+..+...... . .++.
T Consensus 42 ------~~g---~~i~~vilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~~~~~~~~~----~----~~g~------ 96 (207)
T 2zwr_A 42 ------TTG---LIPLAILLTHAHFDHVGAVAPLVEA--LDLPVYLHPLDLPLYEGADLAA----R----AWGL------ 96 (207)
T ss_dssp ------HHT---CCCSCEECSCCCGGGTTTHHHHHHH--HCCCEEECGGGHHHHHTHHHHH----H----HTTC------
T ss_pred ------HcC---CcccEEEECCCChHHHccHHHHHHH--hCCcEEECHHHHHHHhCchhhh----h----hcCC------
Confidence 011 24899999999 999999999763 3679999999987643221110 0 0100
Q ss_pred cchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeC
Q 009999 159 QWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGA 238 (520)
Q Consensus 159 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~ 238 (520)
....+ + .....+..++.+. ++++...| ||..|++++.++
T Consensus 97 -------------------------~~~~~-~---------~~~~~~~~g~~i~---~~~~~~~p-GHt~g~~~~~~~-- 135 (207)
T 2zwr_A 97 -------------------------AIPKP-P---------LPVRPLEEGMRLF---GFQVLHLP-GHSPGHVAFYDP-- 135 (207)
T ss_dssp -------------------------CCCCC-C---------SCCEECCTTCEET---TEEEEECC-SSSTTCEEEEET--
T ss_pred -------------------------CCCcC-C---------CCceEeCCCCEEE---EEEEEeCC-CCCCCcEEEEEC--
Confidence 00000 0 0123444455443 57776654 899999999985
Q ss_pred CeEEEEecCCCC
Q 009999 239 KGNIAYISGSNF 250 (520)
Q Consensus 239 ~~~i~Y~sgD~~ 250 (520)
+++++| |||+.
T Consensus 136 ~~~~lf-~GD~~ 146 (207)
T 2zwr_A 136 EGAQVF-SGDLL 146 (207)
T ss_dssp TTTEEE-EETSE
T ss_pred CCCEEE-Eeccc
Confidence 578999 99974
No 32
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.13 E-value=4.2e-11 Score=117.57 Aligned_cols=169 Identities=13% Similarity=-0.008 Sum_probs=90.4
Q ss_pred CCeEEEEECCEEEEEeCCCCCccc---cccCCCCcccccccccCCccccccccccCCCCccccccccccccccccccccc
Q 009999 15 PPCHILNVSGFHVLFDCPLDLSAL---TVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (520)
Q Consensus 15 ~sc~ll~~~~~~iLlDcG~~~~~~---~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 91 (520)
.+|++|+.++..||||||...... ..|.+. .. .+...+...+ ...+++
T Consensus 35 ~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~------~~----------------~~~~~l~~~l-------~~~g~~ 85 (274)
T 3aj3_A 35 VYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKP------IQ----------------EKHQTIPGAL-------GLLGLE 85 (274)
T ss_dssp EEEEEEEETTEEEEECCCCCHHHHHHHCGGGCC------BC----------------CGGGSHHHHH-------HHTTCC
T ss_pred EEEEEEEeCCccEEEECCCCcccccCccccCCc------cc----------------CccccHHHHH-------HHcCCC
Confidence 589999999999999999884310 000000 00 0000010000 113345
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
+.+||+|++||. ||+||++.|. +.+||+++.+.+........ . ...+. ...|. .+ .
T Consensus 86 ~~~i~~VilTH~H~DH~gg~~~~~-----~a~v~~~~~~~~~~~~~~~~----~--~~~~~------~~~~~-~~----~ 143 (274)
T 3aj3_A 86 PRDIDVVVNSHFHFDHCGGNKYFP-----HAKKICHRSEVPQACNPQPF----E--HLGYS------DLSFS-AE----A 143 (274)
T ss_dssp GGGCCEEECSCCSGGGTTTGGGCT-----TSEEEEETTHHHHHHSCCGG----G--TTTTC------CCTTC-HH----H
T ss_pred HHHCCEEEecCcCcccCCchhhCC-----CCEEEECHHHHHHHhCcCCc----c--ccccC------hhhhc-cc----c
Confidence 678999999999 9999999872 57999999886643210000 0 00000 00010 00 0
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCC-EEEEEEecCCCCccEEEEEEeC-CeEEEEecC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGI-LIIKAFSSGLDIGACNWIISGA-KGNIAYISG 247 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~-~~i~~~~aGH~lGs~~~~I~~~-~~~i~Y~sg 247 (520)
+...... + .......+.+ .++..++ +.+++ ++ +++...+ ||+.|++++.++.+ +++++| ||
T Consensus 144 ~~~~~~~-~--~~~~~~~~~~---------~~~~~~~--~~~~l-~g~~~v~~~p-GHt~g~~~~~~~~~~~~~~lf-~G 206 (274)
T 3aj3_A 144 AEARGAT-A--QLLEGTTRAN---------STFEGID--GDVDL-ARGVKLISTP-GHSIGHYSLLVEFPRRKPILF-TI 206 (274)
T ss_dssp HHHHTCG-G--GCCTTCCSTT---------SCEEEEC--SSEEE-ETTEEEEECT-TSSTTCEEEEECCSSSCCEEE-EE
T ss_pred ccccccc-c--ccccccccCC---------CCceEcC--Ccccc-CCEEEEEECC-CCCceeeEEEEECCCCCEEEE-Ee
Confidence 0000000 0 0000000000 1234443 45777 46 8887775 89999999999876 678999 99
Q ss_pred CCCC
Q 009999 248 SNFA 251 (520)
Q Consensus 248 D~~~ 251 (520)
|...
T Consensus 207 D~~~ 210 (274)
T 3aj3_A 207 DAAY 210 (274)
T ss_dssp TTCS
T ss_pred chhh
Confidence 9743
No 33
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.12 E-value=7.4e-11 Score=111.73 Aligned_cols=128 Identities=16% Similarity=0.068 Sum_probs=90.9
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
..++|++|+.++..||+|||....... .+.. +. .....
T Consensus 29 ~~~n~~li~~~~~~iLiD~G~~~~~~~---------------------------------~~~~---~l------~~~~~ 66 (219)
T 3l6n_A 29 YSANSMYLVTKKGVVLFDVPWEKVQYQ---------------------------------SLMD---TI------KKRHN 66 (219)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGHH---------------------------------HHHH---HH------HHHHS
T ss_pred ccceEEEEEeCCEEEEEeCCCChHHHH---------------------------------HHHH---HH------HHhcC
Confidence 357999999999999999997632100 0000 00 00012
Q ss_pred CcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhch
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 170 (520)
.+|++|++||. ||+||++.|.+ ++.+||+++.+.+..+ +.
T Consensus 67 ~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~----~~------------------------------- 108 (219)
T 3l6n_A 67 LPVVAVFATHSHDDRAGDLSFFNN---KGIKTYATAKTNEFLK----KD------------------------------- 108 (219)
T ss_dssp CCEEEEECSSSSTTTTCCTHHHHH---TTCEEEECHHHHHHHH----HT-------------------------------
T ss_pred CceeEEEecCCCcccccCHHHHHh---CCCEEEEcHHHHHHHH----hc-------------------------------
Confidence 57999999999 99999999986 3789999998865422 10
Q ss_pred hhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEe--cCCCCccEEEEEEeCCeEEEEecCC
Q 009999 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYISGS 248 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~--aGH~lGs~~~~I~~~~~~i~Y~sgD 248 (520)
+. + .....++.++.+.+ ++++|+++. .||..|++++.+. +.+++| |||
T Consensus 109 -----------~~------~---------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD 158 (219)
T 3l6n_A 109 -----------GK------A---------TSTEIIKTGKPYRI-GGEEFVVDFLGEGHTADNVVVWFP--KYNVLD-GGC 158 (219)
T ss_dssp -----------TC------C---------CCSEECCTTSEEEE-TTEEEEEECCCCSSSSSCCEEEET--TTTEEE-EET
T ss_pred -----------CC------C---------CCcEecCCCCEEEE-CCEEEEEEeCCCCCCCCCEEEEEC--CCCEEE-ECC
Confidence 00 0 12445667888888 579999986 6999999999885 457999 999
Q ss_pred CC
Q 009999 249 NF 250 (520)
Q Consensus 249 ~~ 250 (520)
.-
T Consensus 159 ~~ 160 (219)
T 3l6n_A 159 LV 160 (219)
T ss_dssp TS
T ss_pred ee
Confidence 74
No 34
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.12 E-value=5.1e-10 Score=108.78 Aligned_cols=158 Identities=14% Similarity=0.086 Sum_probs=95.7
Q ss_pred eEEEcCCC--CCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccccccccc
Q 009999 2 KFTCLCQG--GGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEP 79 (520)
Q Consensus 2 kl~~lGg~--~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p 79 (520)
.++++..+ |.....+||+|+.++..+|+|||..... .
T Consensus 5 ~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~--------------------------------------~--- 43 (261)
T 3adr_A 5 GLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSI--------------------------------------A--- 43 (261)
T ss_dssp EEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCC--------------------------------------C---
T ss_pred CeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCCh--------------------------------------h---
Confidence 45666443 1223567999987689999999987321 0
Q ss_pred ccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 009999 80 WYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (520)
Q Consensus 80 ~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~ 157 (520)
. ..+ ..+||+|++||. ||++|++.+.+.+ +.+||+++.+.+....-- ....+.+...+.+
T Consensus 44 ~-------l~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~--~~~i~~~~~~~~~l~~~~-~~~~~~~~~~~~~------- 105 (261)
T 3adr_A 44 D-------FSF-LDKLDYIVLTHLHIDHIGLLPELLQVY--KAKVLVKSGFKKYLTSED-GLKKLNESAEKVL------- 105 (261)
T ss_dssp C-------CTT-CSCCCEEECSCCSGGGTTTHHHHHHHS--CCEEEEETTCTHHHHSHH-HHHHHHHHHHHHH-------
T ss_pred h-------cCC-CCCCcEEEECCCCccccCCHHHHHHHh--CCeEEECHHHHHHhcCch-hHHHHHHHHHHHH-------
Confidence 0 012 457999999999 9999999998743 689999998776443100 0000000000000
Q ss_pred ccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEE
Q 009999 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIIS 236 (520)
Q Consensus 158 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~ 236 (520)
.. + ... . . .. .... +. .++..++.++.+.+ ++++|+++++ ||..|+++|.+
T Consensus 106 ---~~---~---~~~---~--~--~~-~~~~-~~--------~~~~~~~~g~~~~~-g~~~i~~~~~pGHt~~~~~~~~- 157 (261)
T 3adr_A 106 ---GD---L---YYV---Y--G--GL-EKKL-DQ--------DKVIEVEGNEEFDL-GGYRMRLIYTPGHARHHMSVLV- 157 (261)
T ss_dssp ---TH---H---HHH---H--C--CC-CSCC-CG--------GGEEEECSCCEEEC-SSSEEEEEECTTSCTTCEEEEE-
T ss_pred ---HH---H---HHH---h--c--cc-ccCC-Cc--------cceEecCCCCEEEE-CCEEEEEEECCCCCCccEEEEE-
Confidence 00 0 000 0 0 00 0000 00 24567778888888 5889998875 69999999964
Q ss_pred eCCeEEEEecCCCC
Q 009999 237 GAKGNIAYISGSNF 250 (520)
Q Consensus 237 ~~~~~i~Y~sgD~~ 250 (520)
.+++| |||+.
T Consensus 158 ---~~~lf-~GD~~ 167 (261)
T 3adr_A 158 ---DDFLF-TGDSA 167 (261)
T ss_dssp ---TTEEE-EETSS
T ss_pred ---CCEEE-EcCcc
Confidence 37999 99984
No 35
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.06 E-value=8.4e-10 Score=109.94 Aligned_cols=161 Identities=18% Similarity=0.226 Sum_probs=100.5
Q ss_pred CeEEEcCCCCCCCCCCeEEEEE--CCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNV--SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~--~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 78 (520)
|+|+.+-.. ..+.+||+|.. ++..+|||+|....... .... + . +...+..
T Consensus 5 m~i~~~~~~--~~~~~~yli~~~~~~~~ilID~g~~~~~~~------~~~~---~----~-----------~~~~l~~-- 56 (298)
T 4efz_A 5 MTVEGFFDP--ATCTISYLLFDSGSGECALIDSVLDYDPKS------GRTR---T----A-----------SADQLIA-- 56 (298)
T ss_dssp CEEEEEECT--TTCBEEEEEECTTTCEEEEESCCBEEETTT------TEEE---C----H-----------HHHHHHH--
T ss_pred eEEEEEecC--CcccEEEEEEECCCCeEEEEcCCCCccccc------cccC---c----c-----------cHHHHHH--
Confidence 777777554 35889999976 67899999998643100 0000 0 0 0000100
Q ss_pred cccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 009999 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (520)
Q Consensus 79 p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 156 (520)
+. ... --+|++||+||. ||++|++.|.+.+ .++||+++.+.++.+.. .. .++..
T Consensus 57 -~l----~~~---g~~i~~Il~TH~H~DH~gg~~~l~~~~--~a~i~~~~~~~~~~~~~-~~----------~~~~~--- 112 (298)
T 4efz_A 57 -RV----AAL---GARVRWLLETHVHADHLSAAPYLKTRV--GGEIAIGRHVTRVQDVF-GK----------LFNAG--- 112 (298)
T ss_dssp -HH----HHH---TCEEEEEECSSCCSSSBCCHHHHHHHH--CCEEEEETTHHHHHHHH-HH----------HTTCC---
T ss_pred -HH----HHC---CCcceEEEECCCchhhhhhHHHHHHHh--CCcEEEChhHHHHHHHH-HH----------hcCCc---
Confidence 00 001 124999999999 9999999998743 68999999887654321 11 01000
Q ss_pred CccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEE
Q 009999 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (520)
Q Consensus 157 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I 235 (520)
. .. ..... .....+..++.+.+ ++++|+.+.+ ||..|+++|.+
T Consensus 113 --------------~----------~~-~~~~~----------~~~~~~~~g~~l~~-g~~~i~vi~tPGHT~g~~~~~~ 156 (298)
T 4efz_A 113 --------------P----------AF-AHDGS----------QFDRLLDDGDTLAL-GALSIRAMHTPGHTPACMTYVV 156 (298)
T ss_dssp --------------T----------TS-CSSST----------TSSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred --------------c----------cc-ccccc----------CCCEEeCCCCEEEE-CCEEEEEEECCCCCcccEEEEE
Confidence 0 00 00000 11256777899999 5788888765 89999999999
Q ss_pred EeCCeE------EEEecCCCC
Q 009999 236 SGAKGN------IAYISGSNF 250 (520)
Q Consensus 236 ~~~~~~------i~Y~sgD~~ 250 (520)
..++++ ++| |||+-
T Consensus 157 ~~~~~~~~~~~~~lf-tGD~l 176 (298)
T 4efz_A 157 TEAHAAHDARDAAAF-VGDTL 176 (298)
T ss_dssp EETTCCGGGCBCEEE-CCSSB
T ss_pred CCCcccccCCceEEE-EcCcc
Confidence 987666 999 99984
No 36
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.04 E-value=1.7e-10 Score=112.91 Aligned_cols=143 Identities=14% Similarity=0.021 Sum_probs=89.4
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
+.+|++|+.++..+|+|||..... + .+.. .. ...+++..
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~--------~--------------------------~l~~---~l----~~~g~~~~ 75 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMA--------S--------------------------HLLD---NM----KARGVTPR 75 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGH--------H--------------------------HHHH---HH----HHTTCCGG
T ss_pred CcEEEEEEeCCceEEEECCCCccH--------H--------------------------HHHH---HH----HHcCCChH
Confidence 568999999999999999975211 0 0000 00 11234556
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 171 (520)
+||+|++||. ||+||++.|.+. +..+||+++.+....+... . . + ..|..
T Consensus 76 ~i~~IilTH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~~~-------~--------~-~--~~~~~--------- 126 (269)
T 1sml_A 76 DLRLILLSHAHADHAGPVAELKRR--TGAKVAANAESAVLLARGG-------S--------D-D--LHFGD--------- 126 (269)
T ss_dssp GEEEEECSCCSHHHHTTHHHHHHH--SSCEEEECHHHHHHHHTTT-------C--------S-B--TTTBT---------
T ss_pred HCcEEEeCCCCccccCCHHHHHHh--cCCeEEECHHHHHHHhcCC-------c--------c-c--ccccc---------
Confidence 8999999999 999999999873 3679999988865432100 0 0 0 00000
Q ss_pred hhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEe--CCe-EEEEecC
Q 009999 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISG--AKG-NIAYISG 247 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~--~~~-~i~Y~sg 247 (520)
...+.+. ...+.+..++.+.+ ++++|+++.. ||..|++++.++. +++ +.++ +|
T Consensus 127 -------------~~~~~~~--------~~~~~~~~g~~~~~-g~~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~-~g 183 (269)
T 1sml_A 127 -------------GITYPPA--------NADRIVMDGEVITV-GGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIA-YA 183 (269)
T ss_dssp -------------SSCCCCC--------CCSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEEEETTEEEEEE-EC
T ss_pred -------------ccCCCCC--------CCCeEeCCCCEEEE-CCEEEEEEECCCCCcccEEEEEecccCCceeEEE-Ee
Confidence 0011111 12345677888888 5788888765 7999999999875 233 2344 46
Q ss_pred CC
Q 009999 248 SN 249 (520)
Q Consensus 248 D~ 249 (520)
|.
T Consensus 184 D~ 185 (269)
T 1sml_A 184 DS 185 (269)
T ss_dssp CC
T ss_pred cc
Confidence 86
No 37
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.04 E-value=7.8e-10 Score=105.28 Aligned_cols=59 Identities=14% Similarity=0.044 Sum_probs=42.9
Q ss_pred eEEeCCCEEEEEEecCCCCc-------cEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEEc
Q 009999 210 EACYNGILIIKAFSSGLDIG-------ACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILYS 272 (520)
Q Consensus 210 ~~~l~~~~~i~~~~aGH~lG-------s~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~~ 272 (520)
.+++ ++++|+++++.|..+ +++|+|+.++++|+| +||++...... ....+.++|+++++
T Consensus 80 ~~~~-~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~-~GDt~~~~~~~--~~~~~~~~Dvlil~ 145 (220)
T 1vjn_A 80 AYTV-NGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCH-LGDLGHVLTPA--QVEEIGEIDVLLVP 145 (220)
T ss_dssp EEEE-TTEEEEEEEEEEC-------CEEEEEEEEETTEEEEE-CTTCCSCCCHH--HHHHHCCCSEEEEE
T ss_pred eEEE-CCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEE-eCCCCCcchHH--HHHhhCCCCEEEEc
Confidence 3456 479999999999762 599999999999999 99997543210 11234689999994
No 38
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.03 E-value=9e-10 Score=111.45 Aligned_cols=155 Identities=15% Similarity=0.111 Sum_probs=91.1
Q ss_pred CCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCCc
Q 009999 15 PPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSF 94 (520)
Q Consensus 15 ~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~ 94 (520)
.+|++|+.++..||||||.... |.+.. ..+...+ ...++++.+
T Consensus 97 ~n~~LI~~~~~~iLIDtG~~~~----~~~~~--------------------------~~l~~~L-------~~~Gi~~~~ 139 (331)
T 1p9e_A 97 VTGYLVNTGSKLVLVDTGAAGL----FGPTL--------------------------GRLAANL-------KAAGYQPEQ 139 (331)
T ss_dssp EEEEEEECSSCEEEECCCCTTS----SCTTC--------------------------CCHHHHH-------HHTTCCGGG
T ss_pred EEEEEEEECCEEEEEECCCCCc----CCcch--------------------------hHHHHHH-------HHcCCCHHH
Confidence 4599999999999999998732 10000 0010100 123456778
Q ss_pred ccEEEecCC--CCCCchhhhhcccCC-ceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCcc-chhhhHhhhch
Q 009999 95 IDVVLISSP--MGMLGLPFLTRMEGF-SAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQ-WMKWEELELLP 170 (520)
Q Consensus 95 id~IlISH~--DH~g~LP~L~~~~~~-~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~-w~~~~~~~~~~ 170 (520)
||+|++||. ||+||++.+.. ..| +.+||+++.+.+... +..... + .+. |..
T Consensus 140 Id~VilTH~H~DHiggl~~~~~-~~fp~a~v~~~~~~~~~~~----~~~~~~----~--------~~~~~~~-------- 194 (331)
T 1p9e_A 140 VDEIYITHMHPDHVGGLMVGEQ-LAFPNAVVRADQKEADFWL----SQTNLD----K--------APDDESK-------- 194 (331)
T ss_dssp CCEEECSCCCHHHHGGGEETTE-ESSTTCEEECBHHHHHHHS----CHHHHT----T--------CSSTTSC--------
T ss_pred CCEEEeCCcccccCCccccccc-ccCCCCEEEECHHHHHHHh----Cchhhc----c--------Cchhhhh--------
Confidence 999999999 99999984322 123 689999998876421 100000 0 000 000
Q ss_pred hhhhhhhccCCCCCCCCCCch-HHHHHHH--HhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeCCeEEEEecC
Q 009999 171 SALRKIALGEDGSELGGGCPC-IAHVKDC--ISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISG 247 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~-~~dv~~~--~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sg 247 (520)
.+... .+.+... -.+++.++.++. +..++++...+ ||+.|+++|.++.++++++| +|
T Consensus 195 ----------------~~~~~~~~~~~~~~~~~~~~~~~~g~~--i~~gi~vi~tp-GHtpG~~~~~i~~~~~~vlf-~G 254 (331)
T 1p9e_A 195 ----------------GFFKGAMASLNPYVKAGKFKPFSGNTD--LVPGIKALASH-GHTPGHTTYVVESQGQKLAL-LG 254 (331)
T ss_dssp ----------------HHHHHHHHHHHHHHHTTCBCCBCSSEE--CSTTEEEEECT-TSSTTCEEEEEEETTEEEEE-CT
T ss_pred ----------------HHHHHHHHHhhhhcccCceEEeCCCCE--EcccEEEEEcC-CCChhCEEEEEEECCcEEEE-EE
Confidence 00000 0111111 123445554443 33467777765 99999999999998999999 99
Q ss_pred CCCC
Q 009999 248 SNFA 251 (520)
Q Consensus 248 D~~~ 251 (520)
|+..
T Consensus 255 D~~~ 258 (331)
T 1p9e_A 255 DLIL 258 (331)
T ss_dssp TSCC
T ss_pred CccC
Confidence 9853
No 39
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.99 E-value=5e-10 Score=121.10 Aligned_cols=196 Identities=13% Similarity=0.054 Sum_probs=106.2
Q ss_pred CeEEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCcccc---ccCCCCcccccccccCCccccccccccCCCCccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALT---VFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFA 77 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~---~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 77 (520)
|+|+++..+ .-.++|++|+.++..||||||....... .+.|-..+.. . . . ...-...+
T Consensus 6 ~~I~~ldvG--~gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~------~-~--~-----~~~~~~~l--- 66 (547)
T 2bib_A 6 NKIHFINVQ--EGGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIE------T-S--Y-----KHVLTDRV--- 66 (547)
T ss_dssp EEEEEECBS--SSBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCC------C-C--G-----GGCCHHHH---
T ss_pred ceEEEEEcC--CCCceEEEEEeCCeEEEEeCCCCCccccccccccccccccc------c-c--c-----cchhHHHH---
Confidence 578888764 2257899999999999999998742100 0000000000 0 0 0 00000001
Q ss_pred ccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCC
Q 009999 78 EPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEES 155 (520)
Q Consensus 78 ~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~ 155 (520)
.|. .....+.+||+|||||. ||++|++.|.+... ..+||+++.+..... +. .
T Consensus 67 ~~~------L~~~gi~~id~vilTH~H~DHiggl~~l~~~~~-~~~i~~~~~~~~~~~----~~----~----------- 120 (547)
T 2bib_A 67 FRR------LKELSVQKLDFILVTHTHSDHIGNVDELLSTYP-VDRVYLKKYSDSRIT----NS----E----------- 120 (547)
T ss_dssp HHH------HHHTTCCCBSCEECCCSCHHHHTTHHHHHHHSC-BSEEECCCCCGGGBS----CG----G-----------
T ss_pred HHH------HHhcCcccccEEEEcCCCccccCCHHHHHHhCC-ccEEEECcccccccC----Ch----H-----------
Confidence 111 01124567999999999 99999999987332 236998876543210 00 0
Q ss_pred CCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHH--hhce----eeccCCeEEeCCCEEEEEEec---CC
Q 009999 156 SGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCI--SKVQ----TLRFGEEACYNGILIIKAFSS---GL 226 (520)
Q Consensus 156 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~--~~i~----~~~y~~~~~l~~~~~i~~~~a---GH 226 (520)
..|..... ..++.+.+ ..+. .+..++.+++ ++++|++++. .|
T Consensus 121 --~~~~~~~~--------------------------~~~~~~~~~~~g~~~~~~~~~~g~~~~~-g~~~i~~l~~~~~~h 171 (547)
T 2bib_A 121 --RLWDNLYG--------------------------YDKVLQTATETGVSVIQNITQGDAHFQF-GDMDIQLYNYENETD 171 (547)
T ss_dssp --GCTTHHHH--------------------------HHHHHHHHHHTTCEEECSCCTTTTEEEE-TTEEEEEESCSCCBC
T ss_pred --HHHhHHHH--------------------------HHHHHHHHHHhCCeEEEeecCCCceEec-CCeeEEEecCccccC
Confidence 00000000 00000000 0111 2355678888 4799999873 23
Q ss_pred -----------CCccEEEEEEeCCeEEEEecCCCCCCCCCCccccccCCCCCEEEE
Q 009999 227 -----------DIGACNWIISGAKGNIAYISGSNFASGHAMDFDYRAIQGSDLILY 271 (520)
Q Consensus 227 -----------~lGs~~~~I~~~~~~i~Y~sgD~~~~~~~~~~~~~~~~~~DvLI~ 271 (520)
..+|++++|+.++.+++| |||..........-...+..+|+|++
T Consensus 172 ~~~~~~~~~~~n~~S~vl~i~~~~~~iLf-tGD~~~~~~~e~~l~~~~~~~DvLkv 226 (547)
T 2bib_A 172 SSGELKKIWDDNSNSLISVVKVNGKKIYL-GGDLDNVHGAEDKYGPLIGKVDLMKF 226 (547)
T ss_dssp TTSCBCCBSSGGGGCCEEEEEETTEEEEE-CTTCCSTTSHHHHHHHHHCCCSEEEC
T ss_pred ccccccccCCCCCCcEEEEEEECCEEEEe-cCCccchhhhhhhhcccccceeEEEe
Confidence 257999999999999999 99996531110000112347999998
No 40
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.96 E-value=7.2e-10 Score=105.36 Aligned_cols=128 Identities=13% Similarity=0.084 Sum_probs=88.5
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
.+.+|++|+.++..+|+|||....... .+.. ... . ...
T Consensus 25 ~~~n~~li~~~~~~iLiD~G~~~~~~~---------------------------------~~~~---~l~---~---~~g 62 (223)
T 1m2x_A 25 YAANAVYLVTDKGVVVIDCPWGEDKFK---------------------------------SFTD---EIY---K---KHG 62 (223)
T ss_dssp EEEEEEEEEETTEEEEESCCSSGGGHH---------------------------------HHHH---HHH---H---HHC
T ss_pred ccccEEEEEeCCEEEEEeCCCChhHHH---------------------------------HHHH---HHH---H---HhC
Confidence 357899999999999999998632100 0000 000 0 001
Q ss_pred CcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhch
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 170 (520)
.+|++|++||. ||++|++.+.+ .+.+||+++.+.+..+ +.
T Consensus 63 ~~i~~vi~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~----~~------------------------------- 104 (223)
T 1m2x_A 63 KKVIMNIATHSHDDRAGGLEYFGK---IGAKTYSTKMTDSILA----KE------------------------------- 104 (223)
T ss_dssp CCEEEEECSSSSTTTTTTHHHHHH---TTCEEEEEHHHHHHHH----HT-------------------------------
T ss_pred CCeEEEEeccCCccccCchhhHhh---CCCeEEEcHHHHHHHH----hc-------------------------------
Confidence 46999999998 99999999886 3679999998865421 10
Q ss_pred hhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEE--ecCCCCccEEEEEEeCCeEEEEecCC
Q 009999 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF--SSGLDIGACNWIISGAKGNIAYISGS 248 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~--~aGH~lGs~~~~I~~~~~~i~Y~sgD 248 (520)
+. . .....+..++.+.+ ++.+++++ ..||..|++++.+. +.+++| |||
T Consensus 105 -----------~~---~------------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~~~~~~~~~--~~~~lf-~GD 154 (223)
T 1m2x_A 105 -----------NK---P------------RAQYTFDNNKSFKV-GKSEFQVYYPGKGHTADNVVVWFP--KEKVLV-GGC 154 (223)
T ss_dssp -----------TC---C------------CCSEEESSCEEEEE-TTEEEEEECCCSSSSSSCCEEEET--TTTEEE-EET
T ss_pred -----------Cc---c------------CCceecCCCceEEE-CCEEEEEEecCCCCCCCCEEEEEC--CCCEEE-Eec
Confidence 00 0 01234556777888 57999997 47999999999875 467999 999
Q ss_pred CC
Q 009999 249 NF 250 (520)
Q Consensus 249 ~~ 250 (520)
..
T Consensus 155 ~~ 156 (223)
T 1m2x_A 155 II 156 (223)
T ss_dssp TS
T ss_pred cc
Confidence 63
No 41
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.95 E-value=3.3e-09 Score=105.71 Aligned_cols=155 Identities=12% Similarity=0.022 Sum_probs=92.5
Q ss_pred CCCeEEE-EECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccc-c
Q 009999 14 FPPCHIL-NVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLW-N 91 (520)
Q Consensus 14 ~~sc~ll-~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~-~ 91 (520)
+.+|++| ..++..+|+|||..... .... ..| . . . + +
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~~--------~~~~----------------------~~l-~---------~-~-~~~ 60 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRDA--------ELVW----------------------ADL-C---------R-W-VAD 60 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGGH--------HHHH----------------------HHH-H---------H-H-CSC
T ss_pred CceEEEEEeCCCceEEEECCCCCcH--------HHHH----------------------HHH-H---------H-H-hcC
Confidence 6789999 48899999999986310 0000 001 0 0 0 1 3
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
..+|++|++||. ||+||++.+.+.+ .+.+||+++.+.+........ .......+.. . ..|...
T Consensus 61 ~~~i~~Ii~TH~H~DH~gg~~~l~~~~-~~a~v~~~~~~~~~~~~~~~~--~~~~~~~~~~--~----~~~~~~------ 125 (303)
T 2vw8_A 61 PSQVHYWLITHKHYDHCGLLPYLCPRL-PNVQVLASERTCQAWKSESAV--RVVERLNRQL--L----RAEQRL------ 125 (303)
T ss_dssp GGGEEEEECCCCSTTTTTTHHHHGGGC-TTCEEEEEHHHHHHTTCHHHH--HHHHHHHHHT--C----CTTCCC------
T ss_pred cccceEEEeccCCccccCCHHHHHHhC-CCCeEEECHHHHHHHhccchh--hHHHHHHHHH--H----Hhhccc------
Confidence 457999999999 9999999998732 268999999988754321110 0000000000 0 000000
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeCCeEEEEecCC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISGS 248 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~~~~i~Y~sgD 248 (520)
. ....+.+ ..+..+..++.++++++++++++.. ||..|++++.+. +.+++| |||
T Consensus 126 ------------~-~~~~~~~---------~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~g~~~~~~~--~~~~lf-~GD 180 (303)
T 2vw8_A 126 ------------P-EACAWDA---------LPVRAVADGEWLELGPRHRLQVIEAHGHSDDHVVFYDV--RRRRLF-CGD 180 (303)
T ss_dssp ------------C-CCCCGGG---------SCEEEECTTCEEEEETTEEEEEEECTTSSTTCEEEEET--TTTEEE-EET
T ss_pred ------------c-cccCCCC---------CCceEcCCCCEEecCCCeEEEEEECCCCCcccEEEEEC--CCCEEE-EcC
Confidence 0 0000101 1235667788888854477777655 899999999885 467999 999
Q ss_pred CC
Q 009999 249 NF 250 (520)
Q Consensus 249 ~~ 250 (520)
..
T Consensus 181 ~~ 182 (303)
T 2vw8_A 181 AL 182 (303)
T ss_dssp TT
T ss_pred cc
Confidence 73
No 42
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.94 E-value=4.9e-10 Score=116.15 Aligned_cols=96 Identities=17% Similarity=0.113 Sum_probs=71.2
Q ss_pred cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+..+||+|++||. ||+||++.|.+.+ .+.+||+++.+.+..+. ..
T Consensus 68 ~~~~i~~iiiTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~~~~----~~---------------------------- 114 (402)
T 1e5d_A 68 DPKKIDYLVIQHLELDHAGALPALIEAC-QPEKIFTSSLGQKAMES----HF---------------------------- 114 (402)
T ss_dssp CGGGCCEEEECCCSHHHHTTHHHHHHHH-CCSEEEEEHHHHHHHHH----HH----------------------------
T ss_pred CcccCCEEEeCCCCccccccHHHHHHHC-CCCEEEEChHHHHHHHH----Hh----------------------------
Confidence 4568999999999 9999999998732 15799999998765332 10
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec--CCCCccEEEEEEeCCeEEEEec
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a--GH~lGs~~~~I~~~~~~i~Y~s 246 (520)
+ .+. ..+..++.++.+.+ ++++++++++ ||..|++++.+ ++.+++| |
T Consensus 115 -------------~--~~~------------~~~~~~~~g~~~~~-g~~~~~~~~~p~gH~~~~~~~~~--~~~~~l~-~ 163 (402)
T 1e5d_A 115 -------------H--YKD------------WPVQVVKHGETLSL-GKRTVTFYETRMLHWPDSMVSWF--ADEKVLI-S 163 (402)
T ss_dssp -------------C--CSS------------CCEEEECTTCEEEC-SSCEEEEEECTTSSSTTCEEEEE--TTTTEEE-E
T ss_pred -------------C--CCC------------CceEEcCCCCEEEE-CCCEEEEEeCCCCCCCCcEEEEE--CCCCEEE-e
Confidence 0 000 13556777888988 4788888766 79999998876 4568999 9
Q ss_pred CCCC
Q 009999 247 GSNF 250 (520)
Q Consensus 247 gD~~ 250 (520)
||+.
T Consensus 164 GD~~ 167 (402)
T 1e5d_A 164 NDIF 167 (402)
T ss_dssp ETTT
T ss_pred cccc
Confidence 9983
No 43
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.94 E-value=1.2e-09 Score=108.55 Aligned_cols=135 Identities=14% Similarity=0.148 Sum_probs=87.2
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
.+.+|++|+.++..||+|||..... . .+.. .. ...+++.
T Consensus 56 ~~~~~~li~~~~~~iLiD~G~~~~~--------~--------------------------~~~~---~l----~~~g~~~ 94 (303)
T 4ax1_B 56 CGISALLVTSDAGHILVDAATPQAG--------P--------------------------QILA---NI----RALGFRP 94 (303)
T ss_dssp SSSCCEEECCTTCEEEECCBSTTCH--------H--------------------------HHHH---HH----HHTTCCG
T ss_pred CCceEEEEEeCCcEEEEECCCcccH--------H--------------------------HHHH---HH----HHcCCCH
Confidence 3678999999999999999975211 0 0000 00 1122345
Q ss_pred CcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhch
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 170 (520)
.+||+|++||. ||++|++.+.+. ++.+||+++.+.+..+.... ....+.|..
T Consensus 95 ~~i~~ii~TH~H~DH~gg~~~l~~~--~~~~v~~~~~~~~~l~~~~~----------------~~~~~~~~~-------- 148 (303)
T 4ax1_B 95 EDVRAIVFSHEHFDHAGSLAELQKA--TGAPVYARAPAIDTLKRGLP----------------DRTDPNFEV-------- 148 (303)
T ss_dssp GGEEEEECSCSSHHHHTTHHHHHHH--HCCCEEEEHHHHHHHHHTSC----------------CTTSTTGGG--------
T ss_pred HHCcEEEcCCCCccccCCHHHHHhh--cCCEEEEcHHHHHHHhcccc----------------Ccccccccc--------
Confidence 67999999999 999999999873 36799999988765332100 000000000
Q ss_pred hhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEe-cCCCCccEEEEEEe
Q 009999 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS-SGLDIGACNWIISG 237 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~-aGH~lGs~~~~I~~ 237 (520)
.. .+.+. ...+.+..++.+++ ++.+|+++. .||..|++.|.+..
T Consensus 149 ----------~~----~~~~~--------~~~~~~~~g~~~~~-g~~~v~~~~~pgHt~g~~~~~~~~ 193 (303)
T 4ax1_B 149 ----------AE----PVAPV--------ANIVTLADDGVVSV-GPLALTAVASPGHTPGGTSWTWRS 193 (303)
T ss_dssp ----------CC----CCCCC--------SCEEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEEE
T ss_pred ----------cc----CcCCC--------CCcEEeCCCCEEEE-CCeEEEEEeCCCCCccceEEEEEe
Confidence 00 00010 24567788999999 478888876 67999999999975
No 44
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=98.92 E-value=1.9e-09 Score=107.98 Aligned_cols=167 Identities=15% Similarity=0.123 Sum_probs=95.4
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
..+||+|+.++..+|+|||....... ..+.. .. ...+++..
T Consensus 21 ~~n~~li~~~~~~ilID~G~~~~~~~--------------------------------~~l~~---~l----~~~g~~~~ 61 (317)
T 2zo4_A 21 TVNLYLLQGAGEVALVDTALGTRAAR--------------------------------GALEL---HL----AELGLCFQ 61 (317)
T ss_dssp EEEEEEEEETTEEEEECCCCSSHHHH--------------------------------HHHHH---HH----HHTTCCGG
T ss_pred cEEEEEEEcCCceEEEECCCCCHHHH--------------------------------HHHHH---HH----HHcCCChh
Confidence 57899999999999999998742100 00000 00 11223456
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHH---HHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEEL---ICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~---~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+|++|++||. ||+||++.+.+. +.+||+++.+.+..+...... ...........+..+. + ...
T Consensus 62 ~i~~Vi~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~-----~~~ 129 (317)
T 2zo4_A 62 DVKTILLTHHHPDHYGLSGFFEGL---GARVFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEG----A-----LQG 129 (317)
T ss_dssp GCCEEEESCCSHHHHTTHHHHHHT---TCEEEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC--------------
T ss_pred hcCEEEEcCCCCcccccHHHHHhC---CCEEEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHH----H-----HHH
Confidence 7999999999 999999999873 689999998876544321100 0000000000000000 0 000
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeCCeEEEEecC
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISG 247 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~~~~i~Y~sg 247 (520)
+........ .. . . + ......+.-++.+.+ ++.+++++.+ ||+.|++++.+ ++.+++| ||
T Consensus 130 ~~~~~~~~~---~~--~-~--~--------~~~~~~~~~g~~l~~-gg~~~~~i~tpGHt~g~~~~~~--~~~~~lf-~G 189 (317)
T 2zo4_A 130 IRETVEKTR---ER--V-H--P--------PQNPLPLRDGEALEV-AGKRLRVLWTPGHADGHAAFYL--EEEGVLL-AG 189 (317)
T ss_dssp --CHHHHHH---TT--C-C--C--------CSSCEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE--TTTTEEE-EE
T ss_pred HHHhccccc---cc--C-C--C--------CCCceEECCCCEEEe-CCceEEEEECCCCCcccEEEEe--CCCCEEE-EC
Confidence 000000000 00 0 0 0 013456777888888 5788888876 89999999976 4678999 99
Q ss_pred CCCC
Q 009999 248 SNFA 251 (520)
Q Consensus 248 D~~~ 251 (520)
|...
T Consensus 190 D~~~ 193 (317)
T 2zo4_A 190 DALL 193 (317)
T ss_dssp TSCC
T ss_pred CEec
Confidence 9843
No 45
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.91 E-value=3.2e-10 Score=120.47 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=96.1
Q ss_pred CeEEEcCCCCCCCCCCeEEE--EECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHIL--NVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll--~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 78 (520)
|+|+.+-.+ ..+.+||+| +.++..+|+|+|.....+.. .+ .
T Consensus 4 m~i~~~~~~--~~~~n~yli~~~~~~~~ilID~g~~~~~~~~--------------------------------~l-~-- 46 (474)
T 3tp9_A 4 MYLRRFYDE--GLAHASYLVGCQETGEACVIDPARDVEPYLL--------------------------------TA-K-- 46 (474)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTTCEEEEESCCSCCHHHHH--------------------------------HH-H--
T ss_pred eEEEEEecC--CceeEEEEEEECCCCEEEEEcCCCChHHHHH--------------------------------HH-H--
Confidence 667666443 347899999 67889999999976432110 01 0
Q ss_pred cccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 009999 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (520)
Q Consensus 79 p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 156 (520)
.. .-+|++||+||. ||++|++.|.+. ++.+||+++.+...
T Consensus 47 --------~~---~~~i~~Il~TH~H~DH~gg~~~l~~~--~~~~i~~~~~~~~~------------------------- 88 (474)
T 3tp9_A 47 --------RE---GLRIVAALETHIHADFVSGAREMADR--AGAAICVSDEGPPE------------------------- 88 (474)
T ss_dssp --------HH---TCEEEEEECSSCCSSSCCCHHHHHHH--HCCEEEEECCSCGG-------------------------
T ss_pred --------Hc---CCeeEEEEcCcCchhhhCCHHHHHHH--HCCcEEEcCcchhh-------------------------
Confidence 01 125999999999 999999999874 36899998765321
Q ss_pred CccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEE
Q 009999 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (520)
Q Consensus 157 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I 235 (520)
|.. .+.+. ...+.+..++.+.+ ++++|+.+.. ||..|++.|.+
T Consensus 89 ---~~~------------------------~~~~~--------~~~~~~~~g~~~~~-g~~~i~~i~tPGHt~g~~~~~~ 132 (474)
T 3tp9_A 89 ---WKS------------------------EYVKA--------YPHRLLKDGDELHF-GNVRIVVMHTPGHTPEHVSYLL 132 (474)
T ss_dssp ---GCC------------------------GGGGG--------SSEEEECTTCEEEE-TTEEEEEEECCSSSSSCEEEEE
T ss_pred ---hcc------------------------ccccc--------ccceECCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 000 00000 12356677888999 5788888766 89999999999
Q ss_pred EeCCe-----EEEEecCCCC
Q 009999 236 SGAKG-----NIAYISGSNF 250 (520)
Q Consensus 236 ~~~~~-----~i~Y~sgD~~ 250 (520)
..+++ +++| |||+-
T Consensus 133 ~~~~~~~~~~~~lf-tGD~l 151 (474)
T 3tp9_A 133 YDGKTSPDVPMALF-SGDFV 151 (474)
T ss_dssp EETTTEEEEEEEEE-EETSE
T ss_pred ecCCCCCCCceEEE-eCCcc
Confidence 87655 8999 99984
No 46
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.90 E-value=1.1e-10 Score=112.59 Aligned_cols=138 Identities=12% Similarity=0.051 Sum_probs=88.4
Q ss_pred CCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccccccccccccccccccccc
Q 009999 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (520)
Q Consensus 12 ~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 91 (520)
..+.+||+|+.++..||+|||....... .+.. +.. . ..
T Consensus 45 ~~~~n~~li~~~~~~iLID~G~~~~~~~---------------------------------~l~~---~l~---~---~~ 82 (243)
T 4hl2_A 45 AVASNGLIVRDGGRVLVVDTAWTDDQTA---------------------------------QILN---WIK---Q---EI 82 (243)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHHH---------------------------------HHHH---HHH---H---HT
T ss_pred cccceEEEEEECCcEEEEECCCCCccHH---------------------------------HHHH---HHH---H---hh
Confidence 3568999999999999999997522100 0000 000 0 00
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
..+|++|++||. ||+||++.+.+ . +.+||+++.+.++.+. . . ... ..+
T Consensus 83 ~~~i~~vi~TH~H~DH~gg~~~l~~-~--~~~v~~~~~~~~~~~~----~----~---~~~-------~~~--------- 132 (243)
T 4hl2_A 83 NLPVALAVVTHAHQDKMGGMDALHA-A--GIATYANALSNQLAPQ----E----G---MVA-------AQH--------- 132 (243)
T ss_dssp CCCEEEEEECSSSHHHHTTHHHHHH-T--TCEEEEEHHHHHHGGG----T----T---CCC-------CSE---------
T ss_pred CCCeeEEEECCCCccccCCHHHHHh-C--CCeEEECHHHHHHHhc----c----c---ccc-------ccc---------
Confidence 225999999999 99999999987 2 7899999887653211 0 0 000 000
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeCCeEEEEecCCC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSN 249 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sgD~ 249 (520)
...+ .....+..++.+++ +++++.....||..|++++.+. +.+++| |||.
T Consensus 133 ---------------~~~~-----------~~~~~~~~g~~~~~-g~~~v~~~~pGHt~g~~~~~~~--~~~~lf-~GD~ 182 (243)
T 4hl2_A 133 ---------------SLTF-----------AANGWVEPATAPNF-GPLKVFYPGPGHTSDNITVGID--GTDIAF-GGCL 182 (243)
T ss_dssp ---------------EECB-----------CTTSBBCGGGSTTC-TTEEEECCCSSSSTTCCEEEET--TTTEEE-CTTT
T ss_pred ---------------cccc-----------ccceEecCCCeEEE-CCEEEEeCCCCCCcCCEEEEEc--CCCEEE-Ecce
Confidence 0000 11233455666677 4799955678999999999885 457999 9997
Q ss_pred CC
Q 009999 250 FA 251 (520)
Q Consensus 250 ~~ 251 (520)
-.
T Consensus 183 ~~ 184 (243)
T 4hl2_A 183 IK 184 (243)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 47
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.89 E-value=1.6e-09 Score=104.77 Aligned_cols=130 Identities=13% Similarity=0.060 Sum_probs=90.0
Q ss_pred CeEEEcCCCCCCCCCCeEEEEEC----CEEEEEeCCCCC-ccccccCCCCcccccccccCCccccccccccCCCCccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVS----GFHVLFDCPLDL-SALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLI 75 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~----~~~iLlDcG~~~-~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 75 (520)
|+|+.+-.. ..+.+||+|+.+ +..+|+|+|... ..+. ..|
T Consensus 3 m~~~~~~~~--~~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~--------------------------------~~l- 47 (245)
T 2gcu_A 3 LLFRQLFEN--ESSTFTYLLADVSHPDKPALLIDPVDKTVDRDL--------------------------------KLI- 47 (245)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTSTTCEEEEESCBGGGHHHHH--------------------------------HHH-
T ss_pred cEEEEeecC--CCceEEEEEEcCCCCCCcEEEEeCCCchHHHHH--------------------------------HHH-
Confidence 456666443 347889999984 689999999751 1100 001
Q ss_pred ccccccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 009999 76 FAEPWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAE 153 (520)
Q Consensus 76 ~~~p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~ 153 (520)
. ..+ -.|++|++||. ||++|++.|.+. ....+||+++.+..
T Consensus 48 ~----------~~g---~~i~~Il~TH~H~DH~gg~~~l~~~-~~~~~v~~~~~~~~----------------------- 90 (245)
T 2gcu_A 48 D----------ELG---LKLIYAMNTHVHADHVTGTGLLKTK-LPGVKSVISKASGS----------------------- 90 (245)
T ss_dssp H----------HHT---CEEEEEECSSCCSSSCBSHHHHHHH-STTCEEEEEGGGCC-----------------------
T ss_pred H----------HCC---CeeeEEEeCCCChhhhhhHHHHHHh-CCCCeEEecccccc-----------------------
Confidence 0 011 14899999999 999999999762 23579999865410
Q ss_pred CCCCccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEE
Q 009999 154 ESSGPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACN 232 (520)
Q Consensus 154 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~ 232 (520)
+ ....+..++.+.+ ++++|+.+.+ ||..|+++
T Consensus 91 ----------------------------------~------------~~~~~~~g~~~~~-g~~~i~v~~tpGHt~g~~~ 123 (245)
T 2gcu_A 91 ----------------------------------K------------ADLFLEPGDKVSI-GDIYLEVRATPGHTAGCVT 123 (245)
T ss_dssp ----------------------------------C------------CSEEECTTCEEEE-TTEEEEEEECCSSSTTCEE
T ss_pred ----------------------------------c------------CCEEcCCCCEEEE-CCEEEEEEECCCCCCCCEE
Confidence 0 1124456778888 4788888765 99999999
Q ss_pred EEEEeCC----eEEEEecCCCC
Q 009999 233 WIISGAK----GNIAYISGSNF 250 (520)
Q Consensus 233 ~~I~~~~----~~i~Y~sgD~~ 250 (520)
|.+...+ .+++| |||+.
T Consensus 124 ~~~~~~~~~~~~~~lf-tGD~~ 144 (245)
T 2gcu_A 124 YVTGEGADQPQPRMAF-TGDAV 144 (245)
T ss_dssp EEECCSTTSCSSCEEE-EETTS
T ss_pred EEECCccccccccEEE-ECCcc
Confidence 9997652 48999 99984
No 48
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.89 E-value=1.7e-09 Score=108.41 Aligned_cols=88 Identities=11% Similarity=0.117 Sum_probs=66.8
Q ss_pred CcccEEEecCC--CCCCchhhhhcccC-----CceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhH
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEG-----FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEE 165 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~-----~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~ 165 (520)
.+|++||+||. ||++|++.|.+.+. ...+||+++... .
T Consensus 83 ~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~~~~v~~~~~~~--------------------~--------------- 127 (311)
T 2p18_A 83 YTFSTILSTHKHWDHSGGNAKLKAELEAMNSTVPVVVVGGANDS--------------------I--------------- 127 (311)
T ss_dssp CEEEEEEESSSSHHHHTTHHHHHHHHHSCC--CCCEEEEEGGGT--------------------C---------------
T ss_pred CCccEEEeCCCCccccCCHHHHHHhhhhcccCCCCEEEEechhc--------------------C---------------
Confidence 47999999999 99999999977331 146899985431 0
Q ss_pred hhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeCC---e-
Q 009999 166 LELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAK---G- 240 (520)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~~---~- 240 (520)
| .....+..++.+.+ ++++|+.+.+ ||..|+++|.++.++ .
T Consensus 128 ------------------------~---------~~~~~l~~g~~l~l-g~~~l~vi~tPGHT~g~i~~~~~~~~~~~~~ 173 (311)
T 2p18_A 128 ------------------------P---------AVTKPVREGDRVQV-GDLSVEVIDAPCHTRGHVLYKVQHPQHPNDG 173 (311)
T ss_dssp ------------------------T---------TCSEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEEECTTCGGGC
T ss_pred ------------------------C---------CCceEeCCCCEEEE-CCeEEEEEECCCCCcccEEEEEecCCcCCcC
Confidence 0 01234566788888 4788888877 999999999998766 6
Q ss_pred EEEEecCCCC
Q 009999 241 NIAYISGSNF 250 (520)
Q Consensus 241 ~i~Y~sgD~~ 250 (520)
+++| |||+.
T Consensus 174 ~~lf-tGD~l 182 (311)
T 2p18_A 174 VALF-TGDTM 182 (311)
T ss_dssp EEEE-EETTE
T ss_pred CEEE-EcCcc
Confidence 8999 99973
No 49
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.86 E-value=2e-09 Score=111.60 Aligned_cols=97 Identities=16% Similarity=0.042 Sum_probs=70.3
Q ss_pred cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+..+||+|++||. ||++|++.+.+.+ .+.+||+++.+.+..+. ....
T Consensus 72 ~~~~i~~ii~TH~H~DH~gg~~~l~~~~-p~~~v~~~~~~~~~~~~----~~~~-------------------------- 120 (404)
T 2ohh_A 72 GMERVDYIIQNHVEKDHSGVLVELHRRF-PEAPIYCTEVAVKGLLK----HYPS-------------------------- 120 (404)
T ss_dssp TCCCCCEEECSCCSHHHHTTHHHHHHHS-TTCCEEECHHHHHHHHH----HCGG--------------------------
T ss_pred CccCCCEEEeCCCCCcccchHHHHHHHC-CCCEEEECHHHHHHHHH----Hhcc--------------------------
Confidence 3568999999999 9999999998732 26799999988664321 1000
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec--CCCCccEEEEEEeCCeEEEEec
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a--GH~lGs~~~~I~~~~~~i~Y~s 246 (520)
+. . ..+..+..++.+++ ++.+++++.+ ||..|++++.+. +.+++| |
T Consensus 121 -~~---------------~------------~~~~~~~~g~~~~~-g~~~i~~~~~p~gH~~~~~~~~~~--~~~~lf-~ 168 (404)
T 2ohh_A 121 -LR---------------E------------AEFMTVKTGDVLDL-GGKTLTFLETPLLHWPDSMFTLLD--EDGILF-S 168 (404)
T ss_dssp -GG---------------G------------SCEEECCTTCEEEC-SSCEEEEEECTTSSSTTCEEEEEE--TTTEEE-C
T ss_pred -cc---------------c------------CCceEcCCCCEEEE-CCEEEEEEeCCCCCCCCceEEEEC--CCcEEE-e
Confidence 00 0 13456677888888 4788888877 699999999875 457999 9
Q ss_pred CCCC
Q 009999 247 GSNF 250 (520)
Q Consensus 247 gD~~ 250 (520)
||+.
T Consensus 169 GD~~ 172 (404)
T 2ohh_A 169 NDAF 172 (404)
T ss_dssp TTTT
T ss_pred cCcc
Confidence 9974
No 50
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.85 E-value=1.7e-09 Score=103.48 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=88.1
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
..+|++|+.++..+|+|||....... .+.. .. ......
T Consensus 36 ~~n~~li~~~~~~iLiD~G~~~~~~~---------------------------------~~~~---~l------~~~~~~ 73 (232)
T 1a7t_A 36 PSNGMIVINNHQAALLDTPINDAQTE---------------------------------MLVN---WV------TDSLHA 73 (232)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHH---------------------------------HHHH---HH------HHHHCC
T ss_pred cceEEEEEeCCEEEEEeCCCCHHHHH---------------------------------HHHH---HH------HHhcCC
Confidence 47899999999999999998632100 0000 00 000134
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 171 (520)
+|++|++||. ||+||++.+.+ .+.+||+++.+.++.+ +.
T Consensus 74 ~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~----~~-------------------------------- 114 (232)
T 1a7t_A 74 KVTTFIPNHWHGDCIGGLGYLQR---KGVQSYANQMTIDLAK----EK-------------------------------- 114 (232)
T ss_dssp EEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHH----HH--------------------------------
T ss_pred CeEEEEeCCCCccccCCHHHHHh---CCCeEEEcHHHHHHHH----hc--------------------------------
Confidence 7999999999 99999999887 3679999998865422 10
Q ss_pred hhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEe--cCCCCccEEEEEEeCCeEEEEecCCC
Q 009999 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYISGSN 249 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~--aGH~lGs~~~~I~~~~~~i~Y~sgD~ 249 (520)
+ + + .....+..++.+.+ ++.+++++. .||..|++++.+. +.+++| |||+
T Consensus 115 ----------~-----~-~---------~~~~~~~~g~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD~ 165 (232)
T 1a7t_A 115 ----------G-----L-P---------VPEHGFTDSLTVSL-DGMPLQCYYLGGGHATDNIVVWLP--TENILF-GGCM 165 (232)
T ss_dssp ----------T-----C-C---------CCSEEESSEEEEEE-TTEEEEEECCCCSSSTTCCEEEET--TTTEEE-EETT
T ss_pred ----------C-----C-C---------CCceecCCCCEEEE-CCeEEEEEeCCCCCCCCCEEEEEC--CCCEEE-EcCc
Confidence 0 0 0 01234455667788 578999884 7999999999875 457999 9998
Q ss_pred CC
Q 009999 250 FA 251 (520)
Q Consensus 250 ~~ 251 (520)
..
T Consensus 166 ~~ 167 (232)
T 1a7t_A 166 LK 167 (232)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 51
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.84 E-value=5.8e-09 Score=99.30 Aligned_cols=127 Identities=19% Similarity=0.117 Sum_probs=86.8
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
..+|++|+.++..+|+|||....... .+.+ ... . ....
T Consensus 40 ~~n~~li~~~~~~iliD~G~~~~~~~---------------------------------~~~~---~l~---~---~~~~ 77 (227)
T 1mqo_A 40 PSNGLVLNTSKGLVLVDSSWDDKLTK---------------------------------ELIE---MVE---K---KFQK 77 (227)
T ss_dssp EEEEEEEEETTEEEEESCCSSHHHHH---------------------------------HHHH---HHH---H---HHTS
T ss_pred cceEEEEEeCCeEEEEECCCChHHHH---------------------------------HHHH---HHH---H---hcCC
Confidence 57899999999999999998742100 0000 000 0 0145
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 171 (520)
+|++|++||. ||++|++.+.+. ..+||+++.+.++.+. .
T Consensus 78 ~i~~ii~TH~H~DH~gg~~~l~~~---~~~v~~~~~~~~~~~~----~-------------------------------- 118 (227)
T 1mqo_A 78 RVTDVIITHAHADRIGGIKTLKER---GIKAHSTALTAELAKK----N-------------------------------- 118 (227)
T ss_dssp CEEEEECCCCSHHHHTTHHHHHHH---TCEEECBHHHHHHHHH----T--------------------------------
T ss_pred CceEEEeCCCCchhccchHHHhhC---CcEEEeccchHHHHHh----c--------------------------------
Confidence 7999999999 999999999873 5799999888654211 0
Q ss_pred hhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEE--ecCCCCccEEEEEEeCCeEEEEecCCC
Q 009999 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAF--SSGLDIGACNWIISGAKGNIAYISGSN 249 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~--~aGH~lGs~~~~I~~~~~~i~Y~sgD~ 249 (520)
+ +. ..+..+..++.+.+ ++++|+++ ..||..|++++.+. +.+++| |||.
T Consensus 119 ----------~-----~~----------~~~~~~~~~~~~~~-g~~~i~~~~~~pgHt~g~~~~~~~--~~~~lf-~GD~ 169 (227)
T 1mqo_A 119 ----------G-----YE----------EPLGDLQTVTNLKF-GNMKVETFYPGKGHTEDNIVVWLP--QYNILV-GGCL 169 (227)
T ss_dssp ----------T-----CC----------CCCCCBCSEEEEEE-TTEEEEEECCCCSSSSSCCEEEET--TTTEEE-EETT
T ss_pred ----------C-----CC----------CCccccCCCCeeeE-CCEEEEEEecCCCCCCCCEEEEEC--CCCEEE-Eeee
Confidence 0 00 01122344566777 57999886 46999999999874 567999 9997
Q ss_pred C
Q 009999 250 F 250 (520)
Q Consensus 250 ~ 250 (520)
.
T Consensus 170 ~ 170 (227)
T 1mqo_A 170 V 170 (227)
T ss_dssp S
T ss_pred e
Confidence 4
No 52
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.83 E-value=4.3e-09 Score=99.89 Aligned_cols=88 Identities=7% Similarity=-0.079 Sum_probs=61.5
Q ss_pred EEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccccccccccccc
Q 009999 4 TCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKT 83 (520)
Q Consensus 4 ~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~ 83 (520)
..+.++ ...+.+|++|+.++..+|+|+|....... .+.+ .
T Consensus 13 ~~~~~~-~~~~~n~~li~~~~~~iLiD~G~~~~~~~---------------------------------~~~~---~--- 52 (227)
T 3iog_A 13 YVVEDN-YYVQENSMVYFGAKGVTVVGATWTPDTAR---------------------------------ELHK---L--- 52 (227)
T ss_dssp EEEEEC-SSSCEEEEEEECSSCEEEESCCSSHHHHH---------------------------------HHHH---H---
T ss_pred EEEECC-CcccCcEEEEEeCCeEEEEECCCChHHHH---------------------------------HHHH---H---
Confidence 344433 34578999999999999999997532100 0000 0
Q ss_pred ccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHH
Q 009999 84 VNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMME 137 (520)
Q Consensus 84 ~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~ 137 (520)
...+...+|++|++||. ||+||++.+.+ .+.+||+++.+..+.+....
T Consensus 53 ---l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~ 102 (227)
T 3iog_A 53 ---IKRVSRKPVLEVINTNYHTDRAGGNAYWKS---IGAKVVSTRQTRDLMKSDWA 102 (227)
T ss_dssp ---HHTTCCSCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHH
T ss_pred ---HHHhcCCCeEEEEeCCCchhhcChHHHHhh---CCCeEEECHHHHHHHHHhhH
Confidence 01124567999999999 99999999875 46899999999887655433
No 53
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.81 E-value=9.1e-09 Score=99.01 Aligned_cols=116 Identities=10% Similarity=0.090 Sum_probs=69.3
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
...+ +|++||. ||+||++.+.+ ++.+||+++.+.+..+.......... .+++. ... +
T Consensus 67 ~~~~-~vi~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~----------~~~----~ 125 (246)
T 2fhx_A 67 PKKV-VAINTHFHLDGTGGNEIYKK---MGAETWSSDLTKQLRLEENKKDRIKA---AEFYK----------NED----L 125 (246)
T ss_dssp CSEE-EEECCSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHHHHHHHHH---HHHCC----------CHH----H
T ss_pred CCcE-EEEeCCCCccccChHHHHhh---cCCEEEEcHHHHHHHHhcchhhhHHH---Hhhhc----------ccc----c
Confidence 3445 7999999 99999999976 36799999999886544322211000 00110 000 0
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEe--cCCCCccEEEEEEeCCeEEEEecC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFS--SGLDIGACNWIISGAKGNIAYISG 247 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~--aGH~lGs~~~~I~~~~~~i~Y~sg 247 (520)
+...... + ...+ ..+..+.-++.+++ ++.+++.+. .||..|++++.+. +.+++| ||
T Consensus 126 ~~~~~~~----~-----~~~~---------~~~~~~~~g~~l~~-g~~~i~~~~~~pGHt~g~~~~~~~--~~~~lf-~G 183 (246)
T 2fhx_A 126 KRRILSS----H-----PVPA---------DNVFDLKQGKVFSF-SNELVEVSFPGPAHSPDNVVVYFP--KKKLLF-GG 183 (246)
T ss_dssp HHHHHHT----C-----CCCC---------SEEECTTTCEEEEE-TTEEEEEECCCCSSSTTCCEEEET--TTTEEE-EE
T ss_pred hhhhccc----c-----cCCC---------CceeecCCCCEEEE-CCEEEEEEeCCCCCCCCCEEEEEc--CCCEEE-EC
Confidence 0000000 0 0000 12334556777888 578888873 6999999998874 467999 99
Q ss_pred CCC
Q 009999 248 SNF 250 (520)
Q Consensus 248 D~~ 250 (520)
|..
T Consensus 184 D~~ 186 (246)
T 2fhx_A 184 CMI 186 (246)
T ss_dssp TTC
T ss_pred CEe
Confidence 974
No 54
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.81 E-value=2.9e-09 Score=104.00 Aligned_cols=128 Identities=13% Similarity=0.086 Sum_probs=87.6
Q ss_pred CeEEEcCCCCCCCCCCeEEEEEC--CEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNVS--GFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~~--~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 78 (520)
|+|+++-.+ .+.+||+|..+ +..+|+|+|.. ..+. ..| .
T Consensus 1 m~i~~i~~~---~~n~~yli~~~~~~~~vlID~G~~-~~i~--------------------------------~~l-~-- 41 (260)
T 1qh5_A 1 MKVEVLPAL---TDNYMYLVIDDETKEAAIVDPVQP-QKVV--------------------------------DAA-R-- 41 (260)
T ss_dssp CEEEEEEET---TTEEEEEEEETTTTEEEEESCSSH-HHHH--------------------------------HHH-H--
T ss_pred CEEEEEEec---CceEEEEEEECCCCEEEEEcCCCH-HHHH--------------------------------HHH-H--
Confidence 778877654 25569999884 68999999932 1100 001 0
Q ss_pred cccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 009999 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (520)
Q Consensus 79 p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 156 (520)
..+ -+|++|++||. ||+||++.|.+.+. +.+||+++...
T Consensus 42 --------~~g---~~i~~IllTH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~--------------------------- 82 (260)
T 1qh5_A 42 --------KHG---VKLTTVLTTHHHWDHAGGNEKLVKLES-GLKVYGGDDRI--------------------------- 82 (260)
T ss_dssp --------HHT---CEEEEEECCCSSHHHHTTHHHHHHHST-TCEEEESCTTS---------------------------
T ss_pred --------HcC---CCccEEEeCCCCccccCCHHHHHHHCC-CCEEEECcccC---------------------------
Confidence 011 14899999999 99999999987331 57999974210
Q ss_pred CccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEE
Q 009999 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (520)
Q Consensus 157 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I 235 (520)
+ .....+..++.+.+ ++++++.+.. ||..|+++|.+
T Consensus 83 ---------------------------------~---------~~~~~~~~g~~~~~-g~~~~~vi~tPGHt~g~~~~~~ 119 (260)
T 1qh5_A 83 ---------------------------------G---------ALTHKITHLSTLQV-GSLNVKCLATPCHTSGHICYFV 119 (260)
T ss_dssp ---------------------------------T---------TCSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred ---------------------------------C---------CCCEEeCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 0 01223455778888 4788887665 99999999998
Q ss_pred -Ee--CCeEEEEecCCCC
Q 009999 236 -SG--AKGNIAYISGSNF 250 (520)
Q Consensus 236 -~~--~~~~i~Y~sgD~~ 250 (520)
+. ++.+++| |||+.
T Consensus 120 ~~~~~~~~~~lf-tGD~l 136 (260)
T 1qh5_A 120 SKPGGSEPPAVF-TGDTL 136 (260)
T ss_dssp ECSSSSSCCEEE-EETTE
T ss_pred eccCCCCCCEEE-EcCcc
Confidence 44 4678999 99973
No 55
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.80 E-value=8.4e-09 Score=98.26 Aligned_cols=88 Identities=9% Similarity=-0.030 Sum_probs=61.7
Q ss_pred EEEcCCCCCCCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccc
Q 009999 3 FTCLCQGGGFNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYK 82 (520)
Q Consensus 3 l~~lGg~~~~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~ 82 (520)
+..+.++ ...+.+|++|+.++..+|+|||....... .+.. .
T Consensus 15 v~~i~~~-~~~~~n~~li~~~~~~iLiD~G~~~~~~~---------------------------------~~~~---~-- 55 (233)
T 3q6v_A 15 LYIVEDK-EYVQENSMVYIGTDGITIIGATWTPETAE---------------------------------TLYK---E-- 55 (233)
T ss_dssp EEEEEEC-SSSCEEEEEEECSSCEEEESCCSSHHHHH---------------------------------HHHH---H--
T ss_pred EEEEeCC-CcCCCcEEEEEeCCeEEEEECCCCHHHHH---------------------------------HHHH---H--
Confidence 3445544 34578999999999999999998742100 0000 0
Q ss_pred cccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHH
Q 009999 83 TVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMM 136 (520)
Q Consensus 83 ~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l 136 (520)
...+...+|++|++||. ||+||++.+.+ .+.+||+++.+.++.+...
T Consensus 56 ----l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~---~~~~v~~~~~~~~~~~~~~ 104 (233)
T 3q6v_A 56 ----IRKVSPLPINEVINTNYHTDRAGGNAYWKT---LGAKIVATQMTYDLQKSQW 104 (233)
T ss_dssp ----HHHHCCCCEEEEECSSSSHHHHTTHHHHHH---TTCEEEEEHHHHHHHHHHH
T ss_pred ----HHHhcCCCcEEEEECCCChhhhChHHHHhh---CCCEEEEcHHHHHHHHhhh
Confidence 00113457999999999 99999999974 4689999999988765443
No 56
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.79 E-value=3.4e-09 Score=103.36 Aligned_cols=125 Identities=11% Similarity=0.095 Sum_probs=87.2
Q ss_pred CeEEEcCCCCCCCCCCeEEEEE-CCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILNV-SGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEP 79 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~~-~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p 79 (520)
|+|+.++.. . +.+||+|.. ++..+|+|+|.. ..+. ..| .
T Consensus 8 m~i~~i~~~--~-~n~~yli~~~~~~~vlID~G~~-~~i~--------------------------------~~l-~--- 47 (258)
T 2qed_A 8 MNLNSIPAF--Q-DNYIWVLTNDEGRCVIVDPGEA-APVL--------------------------------KAI-A--- 47 (258)
T ss_dssp CEEEEEEET--T-TEEEEEEECTTSEEEEECCSCH-HHHH--------------------------------HHH-H---
T ss_pred cEEEEeccc--C-ceEEEEEEECCCcEEEEeCCCc-HHHH--------------------------------HHH-H---
Confidence 788888754 2 566999988 688999999953 1000 001 0
Q ss_pred ccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 009999 80 WYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSG 157 (520)
Q Consensus 80 ~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~ 157 (520)
.. .. +|++|++||. ||+||++.|.+.++ +.+||+++.+. + .
T Consensus 48 -------~~--g~-~i~~Il~TH~H~DH~gg~~~l~~~~~-~~~v~~~~~~~------------~-~------------- 90 (258)
T 2qed_A 48 -------EH--KW-MPEAIFLTHHHHDHVGGVKELLQHFP-QMTVYGPAETQ------------D-K------------- 90 (258)
T ss_dssp -------HH--TC-EEEEEECCSCCHHHHTTHHHHHHHCT-TCEEEECGGGG------------G-G-------------
T ss_pred -------Hc--CC-CCCEEEeCCCCccccCCHHHHHHHCC-CCEEEeccccc------------C-C-------------
Confidence 01 12 6999999999 99999999987432 47999986541 0 0
Q ss_pred ccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEE
Q 009999 158 PQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIIS 236 (520)
Q Consensus 158 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~ 236 (520)
.....+.-++.+++ ++.+++.+.+ ||..|+++|.
T Consensus 91 ------------------------------------------~~~~~~~~g~~~~~-g~~~~~vi~tPGHt~g~~~~~-- 125 (258)
T 2qed_A 91 ------------------------------------------GATHLVGDGDTIRV-LGEKFTLFATPGHTLGHVCYF-- 125 (258)
T ss_dssp ------------------------------------------TCSEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEE--
T ss_pred ------------------------------------------CCcEEeCCCCEEEE-CCcEEEEEECCCCCCCCeEEE--
Confidence 01234455778888 4788888765 9999999998
Q ss_pred eCCeEEEEecCCCC
Q 009999 237 GAKGNIAYISGSNF 250 (520)
Q Consensus 237 ~~~~~i~Y~sgD~~ 250 (520)
+.+++| |||+.
T Consensus 126 --~~~~lf-tGD~l 136 (258)
T 2qed_A 126 --SRPYLF-CGDTL 136 (258)
T ss_dssp --ETTEEE-EETTE
T ss_pred --cCCEEE-ECCCC
Confidence 357899 99973
No 57
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.76 E-value=3.8e-09 Score=109.24 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=69.8
Q ss_pred cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+..+||+|++||. ||++|++.|.+.+ .+.+||+++.+.+..+ +. +
T Consensus 69 ~~~~i~~iiiTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~l~----~~----------~------------------ 115 (398)
T 1ycg_A 69 DPVKLDYLVVNHTESDHAGAFPAIMELC-PDAHVLCTQRAFDSLK----AH----------Y------------------ 115 (398)
T ss_dssp SSCCCSEEEESCCSHHHHTTHHHHHHHC-TTCEEEECHHHHHHHH----HH----------T------------------
T ss_pred CcccCCEEEeCCCCcchhhhHHHHHHHC-CCCEEEEcHHHHHHHH----HH----------h------------------
Confidence 5678999999999 9999999998732 2579999998876432 11 0
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec--CCCCccEEEEEEeCCeEEEEec
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a--GH~lGs~~~~I~~~~~~i~Y~s 246 (520)
+ .+. ..++.+..++.+++ ++.+++++++ ||..|++++.+ ++.+++| |
T Consensus 116 -------------~--~~~------------~~~~~~~~g~~~~~-g~~~~~~~~~p~gH~~~~~~~~~--~~~~~lf-~ 164 (398)
T 1ycg_A 116 -------------S--HID------------FNYTIVKTGTSVSL-GKRSLTFIEAPMLHWPDSMFTYV--PEEALLL-P 164 (398)
T ss_dssp -------------C--SCC------------CEEEECCTTCEEEC-SSCEEEEEECTTSSSTTCEEEEE--TTTTEEE-E
T ss_pred -------------C--CCC------------cceEEeCCCCEEee-CCcEEEEEeCCCCCCCCcEEEEE--CCCcEEE-e
Confidence 0 000 13456677888888 4777877754 79999998775 4568999 9
Q ss_pred CCCC
Q 009999 247 GSNF 250 (520)
Q Consensus 247 gD~~ 250 (520)
||..
T Consensus 165 GD~~ 168 (398)
T 1ycg_A 165 NDAF 168 (398)
T ss_dssp ETTT
T ss_pred cccc
Confidence 9983
No 58
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.76 E-value=2.8e-09 Score=104.03 Aligned_cols=96 Identities=11% Similarity=-0.022 Sum_probs=67.8
Q ss_pred cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+..+||+|++||. ||+||++.+.+.+ .+.+||+++.+.+..+. . ++
T Consensus 76 ~~~~i~~IilTH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~l~~----~----------~~----------------- 123 (262)
T 3hnn_A 76 NLKKLDYVILGHFSPNRIPTFKALLELA-PQITFVCSLPAAGDLRA----A----------FP----------------- 123 (262)
T ss_dssp CGGGEEEEECSSCCGGGHHHHHHHHHHC-TTCEEEECHHHHHHHHH----H----------SS-----------------
T ss_pred ChhhCCEEEECCCCcchhchHHHHHHHC-CCCEEEECHHHHHHHHH----H----------hC-----------------
Confidence 4567999999999 9999999998732 26899999988764321 1 00
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec--CCCCccEEEEEEeCCeEEEEec
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a--GH~lGs~~~~I~~~~~~i~Y~s 246 (520)
... ...+.++.++.++++++.+++++.+ .|..|+..+.+ .+.+++| |
T Consensus 124 ----------------~~~------------~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~g~~~~~~--~~~~~lf-s 172 (262)
T 3hnn_A 124 ----------------DDN------------LNILPMRGKETLDLGKGHVLKFLPIPSPRWPAGLCTYD--VQTQILY-T 172 (262)
T ss_dssp ----------------SSC------------CEEEECCSSCEEECSTTCEEEEEECCCSSCTTCEEEEE--TTTTEEE-E
T ss_pred ----------------CCC------------CceEEeCCCCEEEcCCCcEEEEEECCCCCCCCeeEEEe--CCCCEEE-E
Confidence 000 1356677788999842566665544 38999987765 4567999 9
Q ss_pred CCC
Q 009999 247 GSN 249 (520)
Q Consensus 247 gD~ 249 (520)
||.
T Consensus 173 GD~ 175 (262)
T 3hnn_A 173 DKI 175 (262)
T ss_dssp ETT
T ss_pred eec
Confidence 998
No 59
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=98.76 E-value=1.7e-09 Score=101.25 Aligned_cols=118 Identities=10% Similarity=-0.088 Sum_probs=81.6
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
.+.+||+|+.++..+|+|+|.....+. ..| . ..
T Consensus 22 ~~~n~~li~~~~~~iliD~g~~~~~~~--------------------------------~~l-----------~----~~ 54 (201)
T 2p97_A 22 IDFNGFAWIRPEGNILIDPVALSNHDW--------------------------------KHL-----------E----SL 54 (201)
T ss_dssp EEEEEEEECCTTCCEEESCCCCCHHHH--------------------------------HHH-----------H----HT
T ss_pred cceeEEEEEeCCeeEEEECCCCcHHHH--------------------------------HHH-----------H----hc
Confidence 468899999988999999995321100 001 0 11
Q ss_pred CcccEEEecCCCCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchhh
Q 009999 93 SFIDVVLISSPMGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPSA 172 (520)
Q Consensus 93 ~~id~IlISH~DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 172 (520)
.+|++|++||.||+||++.+.+.+ ..+||+++.+.+..+
T Consensus 55 g~i~~ii~TH~DH~gg~~~~~~~~--~a~v~~~~~~~~~~~--------------------------------------- 93 (201)
T 2p97_A 55 GGVVWIVLTNSDHVRSAKEIADQT--YTKIAGPVAEKENFP--------------------------------------- 93 (201)
T ss_dssp TCCSEEECSSGGGCTTHHHHHHHS--CCEEEEEGGGTTSCS---------------------------------------
T ss_pred CCCCEEEECCchhhhhHHHHHHhc--CCEEEEcHhHhhhhc---------------------------------------
Confidence 279999999999999999998743 589999976532100
Q ss_pred hhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeCCeEEEEecCCCC
Q 009999 173 LRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF 250 (520)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sgD~~ 250 (520)
. + ....+.-++.+ ..++++...++||..|++++.++ + +++| |||..
T Consensus 94 ---------~-------~----------~~~~~~~g~~~--~~~~~~~~~p~gHt~g~~~~~~~--~-~~lf-~GD~~ 139 (201)
T 2p97_A 94 ---------I-------Y----------CDRWLSDGDEL--VPGLKVMELQGSKTPGELALLLE--E-TTLI-TGDLV 139 (201)
T ss_dssp ---------S-------C----------CSEEECTTCBS--STTEEEEEECSSSSTTEEEEEET--T-TEEE-ECSSE
T ss_pred ---------c-------c----------CceecCCCCEE--cceEEEEECCCCCCCCcEEEEEc--C-CEEE-ECccc
Confidence 0 0 01223334433 23688888889999999999887 3 8999 99974
No 60
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.75 E-value=9.7e-09 Score=106.63 Aligned_cols=94 Identities=16% Similarity=0.074 Sum_probs=71.0
Q ss_pred ccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhh
Q 009999 90 WNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELE 167 (520)
Q Consensus 90 ~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 167 (520)
++..+||.|++||. ||+|+++.|.+.++.+.+||+++.+..+.+ ...
T Consensus 85 i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~~~~~v~~s~~~~~~l~----~~~--------------------------- 133 (410)
T 4dik_A 85 VDPKEITHIIVNHTEPDASGSLPATLKTIGHDVEIIASNFGKRLLE----GFY--------------------------- 133 (410)
T ss_dssp SCGGGCCEEECSCCCHHHHTTHHHHHHHHCSCCEEEECHHHHHHHH----HHH---------------------------
T ss_pred cCcccCCEEEeCcCCcchhhhHHHHHHHcCCCCEEEeCHHHHHHHH----hhc---------------------------
Confidence 35678999999999 999999999876666789999998876532 211
Q ss_pred hchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-C-CCCccEEEEEEeCCeEEEEe
Q 009999 168 LLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-G-LDIGACNWIISGAKGNIAYI 245 (520)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-G-H~lGs~~~~I~~~~~~i~Y~ 245 (520)
+ . ..++.++-|+.+++ |+.+++++.+ | |..|+..+.. .+++|
T Consensus 134 --------------~----~------------~~~~~v~dGd~l~l-G~~~L~~i~tPg~H~p~~~~~y~----~~iLF- 177 (410)
T 4dik_A 134 --------------G----I------------KDVTVVKDGEEREI-GGKKFKFVMTPWLHWPDTMVTYL----DGILF- 177 (410)
T ss_dssp --------------C----C------------CCEEECCTTCEEEE-TTEEEEEEECTTSSSTTCEEEEE----TTEEE-
T ss_pred --------------C----c------------cceeEecCCCEEee-cceEEEEecCCCCCCCCCeeEEe----CCceE-
Confidence 0 0 13566778999999 5788887766 4 8999887764 25899
Q ss_pred cCCCC
Q 009999 246 SGSNF 250 (520)
Q Consensus 246 sgD~~ 250 (520)
|||..
T Consensus 178 sgD~f 182 (410)
T 4dik_A 178 SCDVG 182 (410)
T ss_dssp EETTT
T ss_pred ccccc
Confidence 99973
No 61
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=98.74 E-value=8.9e-10 Score=109.06 Aligned_cols=132 Identities=11% Similarity=0.011 Sum_probs=87.3
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
+.+||+|+.++..+|+|||..... ... ..+.. . ......
T Consensus 31 ~~n~~li~~~~~~ilID~G~~~~~--------~~~-----------------------~~l~~---~-------l~~~~~ 69 (289)
T 4ad9_A 31 GTNTYLVGTGPRRILIDTGEPAIP--------EYI-----------------------SCLKQ---A-------LTEFNT 69 (289)
T ss_dssp CCEEEEECSSSSEEEECCCSTTCH--------HHH-----------------------HHHHH---H-------HHHTTC
T ss_pred ceEEEEEecCCceEEEeCCCCCCh--------HHH-----------------------HHHHH---H-------HHHcCC
Confidence 689999999899999999975221 000 00000 0 000122
Q ss_pred cccEEEecCC--CCCCchhhhhcccC--CceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhc
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEG--FSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELL 169 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~--~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 169 (520)
+|++|++||. ||+||++.|.+... ...+||+...+... . +..
T Consensus 70 ~i~~Ii~TH~H~DH~gg~~~l~~~~~~~~~~~v~~~~~~~~~------------~---~~~------------------- 115 (289)
T 4ad9_A 70 AIQEIVVTHWHRDHSGGIGDICKSINNDTTYCIKKLPRNPQR------------E---EII------------------- 115 (289)
T ss_dssp CEEEEECSCSSHHHHTTHHHHHHHSCCSSCCCEEECCCSSCC------------C---CCB-------------------
T ss_pred CceEEEEcCCCCcccccHHHHHHhhccCCCceEEecCCCcch------------h---hhc-------------------
Confidence 6999999999 99999999988442 25678876432100 0 000
Q ss_pred hhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeCCeEEEEecCC
Q 009999 170 PSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISGS 248 (520)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~~~~i~Y~sgD 248 (520)
. .. + ..+..+..++.+.+ ++.+++++.+ ||..|++++.+. +.+++| |||
T Consensus 116 ------------~----~~-~---------~~~~~~~~g~~~~~-gg~~~~~~~~pGHt~~~~~~~~~--~~~~lf-tGD 165 (289)
T 4ad9_A 116 ------------G----NG-E---------QQYVYLKDGDVIKT-EGATLRVLYTPGHTDDHMALLLE--EENAIF-SGD 165 (289)
T ss_dssp ------------T----TT-T---------BCEEECCTTCEEEE-TTEEEEEEECCSSSTTCEEEEET--TTTEEE-EET
T ss_pred ------------c----CC-C---------CceEEcCCCCEEEe-CCeEEEEEECCCCCCCCEEEEEc--CCCEEE-Eec
Confidence 0 00 0 24567788999999 4799998887 999999999985 446999 999
Q ss_pred CC
Q 009999 249 NF 250 (520)
Q Consensus 249 ~~ 250 (520)
.-
T Consensus 166 ~~ 167 (289)
T 4ad9_A 166 CI 167 (289)
T ss_dssp SS
T ss_pred cc
Confidence 73
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.73 E-value=6.7e-09 Score=109.98 Aligned_cols=138 Identities=13% Similarity=0.090 Sum_probs=93.4
Q ss_pred CeEEEcCCCCCCCCCCeEEEE--ECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccc
Q 009999 1 MKFTCLCQGGGFNFPPCHILN--VSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAE 78 (520)
Q Consensus 1 mkl~~lGg~~~~~~~sc~ll~--~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 78 (520)
|+|+.+-.+ ..+.+||+|. .++..+|||+|.....+.. .+ .
T Consensus 25 m~i~~~~~~--~~~~nsyli~~~~~~~~vlID~g~~~~~~~~--------------------------------~l-~-- 67 (466)
T 3r2u_A 25 MFFKQFYDK--HLSQASYLIGCQKTGEAMIIDPIRDLSSYIR--------------------------------VA-D-- 67 (466)
T ss_dssp EEEEEEEET--TTTEEEEEEEETTTCEEEEESCCSCCHHHHH--------------------------------HH-H--
T ss_pred eEEEEEecC--CccceEEEEEeCCCCEEEEEcCCCCHHHHHH--------------------------------HH-H--
Confidence 455444332 2478999995 4789999999965332110 00 0
Q ss_pred cccccccccccccCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Q 009999 79 PWYKTVNNLHLWNVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESS 156 (520)
Q Consensus 79 p~~~~~~~~~~~~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~ 156 (520)
. ...+|++|++||. ||++|++.|.+.+ +.+||+++.+...
T Consensus 68 --------~---~g~~i~~Il~TH~H~DH~gg~~~l~~~~--~a~v~~~~~~~~~------------------------- 109 (466)
T 3r2u_A 68 --------E---EGLTITHAAETHIHADFASGIRDVAIKL--NANIYVSGESDDT------------------------- 109 (466)
T ss_dssp --------H---HTCEEEEEECSSCCSSSCCCHHHHHHHH--CCEEEEECCSCTT-------------------------
T ss_pred --------H---CCCeeeEEEECCCChhhhccHHHHHHhh--CCeEEECcchhhh-------------------------
Confidence 0 1125999999999 9999999998743 6799999763110
Q ss_pred CccchhhhHhhhchhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEE
Q 009999 157 GPQWMKWEELELLPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWII 235 (520)
Q Consensus 157 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I 235 (520)
|. . .+.+ .....+..++.+++ ++++|+.+.+ ||..|++.|.+
T Consensus 110 ---~~--------------------~----~~~~---------~~~~~~~~g~~l~~-g~~~l~vi~tPGHT~g~~~~~~ 152 (466)
T 3r2u_A 110 ---LG--------------------Y----KNMP---------NHTHFVQHNDDIYV-GNIKLKVLHTPGHTPESISFLL 152 (466)
T ss_dssp ---TS--------------------C----CSCC---------TTCEEECTTCEEEE-TTEEEEEEECCSSSTTCEEEEE
T ss_pred ---hc--------------------c----ccCC---------CCCEEeCCCCEEEE-CCEEEEEEECCCCCCCCEEEEE
Confidence 00 0 0001 13466778899999 5799998875 79999999999
Q ss_pred EeC-----CeEEEEecCCCCC
Q 009999 236 SGA-----KGNIAYISGSNFA 251 (520)
Q Consensus 236 ~~~-----~~~i~Y~sgD~~~ 251 (520)
... +.+++| |||+-.
T Consensus 153 ~~~~~~~~~~~~lf-tGD~lf 172 (466)
T 3r2u_A 153 TDEGAGAQVPMGLF-SGDFIF 172 (466)
T ss_dssp ECGGGTCCSCCEEE-EETTBC
T ss_pred cCCCccCCCceEEE-ECCccc
Confidence 863 446999 999843
No 63
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.72 E-value=4.1e-09 Score=102.48 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=63.6
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhchh
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLPS 171 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 171 (520)
+|++|++||. ||+||++.|.+.+ ..+||+++.+... +
T Consensus 46 ~i~~Il~TH~H~DH~gg~~~l~~~~--~~~v~~~~~~~~~------------------~--------------------- 84 (254)
T 1xm8_A 46 NLTYILNTHHHYDHTGGNLELKDRY--GAKVIGSAMDKDR------------------I--------------------- 84 (254)
T ss_dssp CCCEEECSSCCHHHHTTHHHHHHHH--CCEEEEEGGGGGG------------------S---------------------
T ss_pred CccEEEECCCCCcccccHHHHHHHc--CCeEEEchhhhhc------------------C---------------------
Confidence 5899999999 9999999998743 5799998754220 0
Q ss_pred hhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec-CCCCccEEEEEEeCCeEEEEecCCCC
Q 009999 172 ALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS-GLDIGACNWIISGAKGNIAYISGSNF 250 (520)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a-GH~lGs~~~~I~~~~~~i~Y~sgD~~ 250 (520)
+ .....+.-++.+.+ ++.+++.+.+ ||..|+++|.+. +.+++| |||+.
T Consensus 85 ------------------~---------~~~~~~~~g~~~~l-g~~~~~vi~tPGHt~g~~~~~~~--~~~~lf-tGD~l 133 (254)
T 1xm8_A 85 ------------------P---------GIDMALKDGDKWMF-AGHEVHVMDTPGHTKGHISLYFP--GSRAIF-TGDTM 133 (254)
T ss_dssp ------------------T---------TEEEEECTTCEEEE-TTEEEEEEECCSSSSSCEEEEEG--GGTEEE-EETTE
T ss_pred ------------------C---------CCceeeCCCCEEEE-CCEEEEEEECCCCCCCcEEEEEC--CCCEEE-EcCcc
Confidence 0 01234556788888 4788888764 899999999985 357999 99973
No 64
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.61 E-value=2.7e-08 Score=103.55 Aligned_cols=96 Identities=11% Similarity=-0.052 Sum_probs=67.2
Q ss_pred cCCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhh
Q 009999 91 NVSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELEL 168 (520)
Q Consensus 91 ~~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 168 (520)
+..+||+|++||. ||+||++.|.+.+ .+.+||+++.+.+..+ +.. +
T Consensus 74 ~~~~i~~ii~TH~H~DH~gg~~~l~~~~-~~~~v~~~~~~~~~~~----~~~----------~----------------- 121 (414)
T 2q9u_A 74 PLDKIKYVVMNHAEGDHASSLKDHYHKF-TNATFVCTKKCQEHLK----ILY----------G----------------- 121 (414)
T ss_dssp CGGGCCEEECSCCSGGGTTTHHHHGGGS-TTCEEEECHHHHHHHH----HHH----------C-----------------
T ss_pred CcccCCEEEeCCCCcchhcCHHHHHHHC-CCCEEEECHHHHHHHH----HHh----------C-----------------
Confidence 4568999999999 9999999998732 2689999999876432 110 0
Q ss_pred chhhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEec--CCCCccEEEEEEeCCeEEEEec
Q 009999 169 LPSALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSS--GLDIGACNWIISGAKGNIAYIS 246 (520)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~a--GH~lGs~~~~I~~~~~~i~Y~s 246 (520)
.+. ..+..+..++.++++ +.+++++.+ ||..|+..+.+ .+.+++| |
T Consensus 122 ----------------~~~------------~~~~~~~~g~~~~lg-~~~~~~~~~p~gHt~~~~~~~~--~~~~~lf-~ 169 (414)
T 2q9u_A 122 ----------------MEK------------ATWLIVDDKYTLKIG-KRTLKFIPVPLLHWPDSTFTYC--PEDKILF-S 169 (414)
T ss_dssp ----------------CTT------------CCEEECCTTCCEECS-SCEEEEEECTTSSSTTCEEEEE--TTTTEEE-E
T ss_pred ----------------CCC------------CeeEEeCCCCEEEEC-CeEEEEEeCCCCCCCCceEEEE--CCCeEEE-E
Confidence 000 123456668888884 666666554 79999887654 3567999 9
Q ss_pred CCCC
Q 009999 247 GSNF 250 (520)
Q Consensus 247 gD~~ 250 (520)
||..
T Consensus 170 GD~~ 173 (414)
T 2q9u_A 170 NDGF 173 (414)
T ss_dssp ETTT
T ss_pred cccc
Confidence 9963
No 65
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.60 E-value=2.4e-08 Score=97.54 Aligned_cols=132 Identities=8% Similarity=0.003 Sum_probs=84.7
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
.+.+||+|+.++..+|+|+|...... ..+.+ ... . . ..
T Consensus 66 ~~~n~~li~~~~~~iLID~G~~~~~~---------------------------------~~l~~---~l~---~-~--~g 103 (265)
T 2y8b_A 66 YSSNGLIVRDADELLLIDTAWGAKNT---------------------------------VALLA---EIE---K-Q--IG 103 (265)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHHH---------------------------------HHHHH---HHH---H-H--TC
T ss_pred ccceEEEEEECCeEEEEeCCCCHHHH---------------------------------HHHHH---HHH---H-h--cC
Confidence 35789999999999999999862210 00000 000 0 0 01
Q ss_pred CcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCccchhhhHhhhch
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARIGQLMMEELICMNMEYRQFYGAEESSGPQWMKWEELELLP 170 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 170 (520)
.+|++|++||. ||+||++.+.+ . +.+||+++.+.+..+ +. . .
T Consensus 104 ~~i~~VilTH~H~DH~gg~~~~~~-~--~a~v~~~~~~~~~~~----~~----~-----~-------------------- 147 (265)
T 2y8b_A 104 LPVTRSISTHFHDDRVGGVDVLRA-A--GVATYTSPLTRQLAE----AA----G-----N-------------------- 147 (265)
T ss_dssp SCEEEEECSSSSHHHHTTHHHHHH-T--TCEEEECHHHHHHHH----HT----T-----C--------------------
T ss_pred CCeEEEEeCCCChhhcCCHHHHhh-C--CCeEEECHHHHHHHH----hc----c-----c--------------------
Confidence 26999999999 99999998876 2 689999998876432 10 0 0
Q ss_pred hhhhhhhccCCCCCCCCCCchHHHHHHHHhhceeeccCCeEEeCCCEEEEEEecCCCCccEEEEEEeCCeEEEEecCCCC
Q 009999 171 SALRKIALGEDGSELGGGCPCIAHVKDCISKVQTLRFGEEACYNGILIIKAFSSGLDIGACNWIISGAKGNIAYISGSNF 250 (520)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~i~~~~y~~~~~l~~~~~i~~~~aGH~lGs~~~~I~~~~~~i~Y~sgD~~ 250 (520)
. ... .++ ..+ .+.++.+.+ +++++.....||..|++++.++ +++++| |||.-
T Consensus 148 -----------~--~~~-~~~--------~~~--~~~~~~~~~-g~~~v~~~~pGHt~g~~~~~~~--~~~~lf-~GD~~ 199 (265)
T 2y8b_A 148 -----------E--VPA-HSL--------KAL--SSSGDVVRF-GPVEVFYPGAAHSGDNLVVYVP--AVRVLF-GGCAV 199 (265)
T ss_dssp -----------C--CCS-EEC--------SSC--SSTTEEEEE-TTEEEEECCSSSSTTCCEEEET--TTTEEE-EETTS
T ss_pred -----------c--ccc-ccc--------ccc--CCCCcEEee-cCEEEEecCCCCCCCCEEEEec--CCCEEE-Ecccc
Confidence 0 000 000 000 123445666 4788876678999999999885 357999 99974
No 66
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.51 E-value=3e-08 Score=94.46 Aligned_cols=73 Identities=18% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccC
Q 009999 13 NFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNV 92 (520)
Q Consensus 13 ~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~ 92 (520)
.+.+||+|+.++..+|+|+|....... .+.. +. ... .
T Consensus 31 ~~~n~~li~~~~~~iliD~g~~~~~~~---------------------------------~~~~---~l----~~~--g- 67 (228)
T 1jjt_A 31 VPKHGLVVLVNAEAYLIDTPFTAKDTE---------------------------------KLVT---WF----VER--G- 67 (228)
T ss_dssp EEEEEEEEEETTEEEEESCCSSHHHHH---------------------------------HHHH---HH----HTT--T-
T ss_pred ccceEEEEEECCcEEEEeCCCChhhHH---------------------------------HHHH---HH----HHc--C-
Confidence 457899999999999999998632100 0000 00 001 1
Q ss_pred CcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHH
Q 009999 93 SFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARI 131 (520)
Q Consensus 93 ~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l 131 (520)
.+|++|++||. ||+||++.+.+ ++.+||+++.+.++
T Consensus 68 ~~i~~ii~TH~H~DH~gg~~~l~~---~~~~v~~~~~~~~~ 105 (228)
T 1jjt_A 68 YKIKGSISSHFHSDSTGGIEWLNS---RSIPTYASELTNEL 105 (228)
T ss_dssp CEEEEEECSSSSHHHHTTHHHHHH---TTCCEEEEHHHHHH
T ss_pred CCeeEEEeCCCChhhhccHHHHHh---CCCEEEEChHHHHH
Confidence 26899999999 99999999876 26799999988764
No 67
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.22 E-value=1e-06 Score=86.92 Aligned_cols=71 Identities=17% Similarity=0.121 Sum_probs=53.5
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
.++|++|+.++..||+|||....-+ ..+ ....+++.
T Consensus 32 ~g~s~li~~~~~~iLiD~G~~~~~~---------------------------------~~l-----------~~~g~~~~ 67 (284)
T 2p4z_A 32 HGLSLLLKKGNKEIVVDTGQSENFI---------------------------------KNC-----------GLMGIDVG 67 (284)
T ss_dssp SSCEEEEEETTEEEEECCCSSTHHH---------------------------------HHH-----------HHTTCCGG
T ss_pred CEEEEEEEECCeEEEEeCCCCHHHH---------------------------------HHH-----------HHcCCChh
Confidence 6889999999999999999863210 001 11234567
Q ss_pred cccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHH
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAA 129 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~ 129 (520)
+||+|++||. ||++|++.+.+.+ .+.+||+++.+.
T Consensus 68 ~i~~v~lTH~H~DH~ggl~~~~~~~-~~~~v~~~~~~~ 104 (284)
T 2p4z_A 68 RIKKVVLTHGHYDHIGGLKGLLERN-PEVKIYTHKEIL 104 (284)
T ss_dssp GCCEEECCCSCHHHHTTHHHHHHHC-TTCEEEEEGGGG
T ss_pred hCCEEEECCCCchhhccHHHHHHHc-CCCceecCHHHH
Confidence 8999999999 9999999987622 268999998874
No 68
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.14 E-value=2.2e-07 Score=90.92 Aligned_cols=75 Identities=12% Similarity=0.117 Sum_probs=53.2
Q ss_pred CCCCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCccccccccccccccccccccc
Q 009999 12 FNFPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWN 91 (520)
Q Consensus 12 ~~~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~ 91 (520)
.+..|||+|..++..+|+|+|...... +.+.+ +.. ...
T Consensus 72 ~~~~N~ylv~~~~~~ilIDtg~~~~~~---------------------------------~~l~~---~i~------~~~ 109 (270)
T 4eyb_A 72 AVASNGLIVRDGGRVLVVDTAWTDDQT---------------------------------AQILN---WIK------QEI 109 (270)
T ss_dssp EEEEEEEEEEETTEEEEESCCSSHHHH---------------------------------HHHHH---HHH------HHT
T ss_pred ccceEEEEEEECCEEEEEeCCCCHHHH---------------------------------HHHHH---HHH------Hhc
Confidence 345789999999999999999874310 00101 000 001
Q ss_pred CCcccEEEecCC--CCCCchhhhhcccCCceeEEEeHHHHHH
Q 009999 92 VSFIDVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAARI 131 (520)
Q Consensus 92 ~~~id~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~~l 131 (520)
...|++|++||. ||+||+..|.+ . ..|||+++.+.++
T Consensus 110 ~~~I~~Ii~TH~H~DH~gg~~~l~~-~--~~~v~~~~~~~~~ 148 (270)
T 4eyb_A 110 NLPVALAVVTHAHQDKMGGMDALHA-A--GIATYANALSNQL 148 (270)
T ss_dssp CCCEEEEEECSSSHHHHTTHHHHHH-T--TCEEEEEHHHHHH
T ss_pred CCceEEEEeCCCChhhcCcHHHHHH-C--CCeEEECHHHHHH
Confidence 236899999999 99999999977 2 6799999887654
No 69
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=97.92 E-value=2e-05 Score=86.68 Aligned_cols=78 Identities=9% Similarity=-0.034 Sum_probs=54.1
Q ss_pred CCCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCC
Q 009999 14 FPPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVS 93 (520)
Q Consensus 14 ~~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~ 93 (520)
..+|++|+.++..||||+|....... ..+ . .+. ..+...
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a~--------------------------------~~l-~---~i~-----~~~~~~ 160 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATAR--------------------------------AAY-E---LVS-----RELGER 160 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHHH--------------------------------HHH-H---HHH-----HHHCCC
T ss_pred CeEEEEEEECCEEEEEECCCCHHHHH--------------------------------HHH-H---HHH-----hhCCCC
Confidence 57899999888999999998743100 000 0 000 012346
Q ss_pred cccEEEecCC--CCCCchhhhhcc---cCCceeEEEeHHHHHHH
Q 009999 94 FIDVVLISSP--MGMLGLPFLTRM---EGFSAKIYITEAAARIG 132 (520)
Q Consensus 94 ~id~IlISH~--DH~g~LP~L~~~---~~~~~~Iy~T~~T~~l~ 132 (520)
+|++|++||. ||+||++.+.+. ...+.+||+++.+.+..
T Consensus 161 ~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~~~~~~~~ 204 (658)
T 2cfu_A 161 PIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAPAGFMEAA 204 (658)
T ss_dssp CEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEETTHHHHH
T ss_pred CceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEchhHHHHH
Confidence 7999999999 999999998751 02367999999987653
No 70
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=96.77 E-value=8.4e-06 Score=89.43 Aligned_cols=75 Identities=15% Similarity=0.017 Sum_probs=51.5
Q ss_pred CCeEEEEECCEEEEEeCCCCCccccccCCCCcccccccccCCccccccccccCCCCcccccccccccccccccccccCCc
Q 009999 15 PPCHILNVSGFHVLFDCPLDLSALTVFSPLPNDFYKAICKENSDSQNRQKVEKPLDANDLIFAEPWYKTVNNLHLWNVSF 94 (520)
Q Consensus 15 ~sc~ll~~~~~~iLlDcG~~~~~~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~ 94 (520)
.+|++|+.++..||||+|....... . .+ . .+. ..+....
T Consensus 133 ~N~~lI~~~~~~iLIDtG~~~~~a~------~--------------------------~l-~---~i~-----~~~~~~~ 171 (668)
T 2yhe_A 133 ANMTIIEGDSGLVLIDTLTTAETAR------A--------------------------AL-D---LYF-----QHRPKKP 171 (668)
Confidence 6899999888999999998743100 0 00 0 000 0112457
Q ss_pred ccEEEecCC--CCCCchhhhhcc---cCCceeEEEeHHHHH
Q 009999 95 IDVVLISSP--MGMLGLPFLTRM---EGFSAKIYITEAAAR 130 (520)
Q Consensus 95 id~IlISH~--DH~g~LP~L~~~---~~~~~~Iy~T~~T~~ 130 (520)
|++|++||. ||+||++.+.+. ...+.+||+++.+.+
T Consensus 172 I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~~~~e 212 (668)
T 2yhe_A 172 IVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPSGFME 212 (668)
Confidence 999999999 999999998762 024679999998744
No 71
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.25 E-value=9.7e-05 Score=71.83 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=25.6
Q ss_pred cEEEecCC--CCCCchhhhhcccCCceeEEEeHHHH
Q 009999 96 DVVLISSP--MGMLGLPFLTRMEGFSAKIYITEAAA 129 (520)
Q Consensus 96 d~IlISH~--DH~g~LP~L~~~~~~~~~Iy~T~~T~ 129 (520)
|+|++||. ||+||++.+ .+.+||+++..+
T Consensus 63 ~~IvlTH~H~DH~ggl~~l-----~~~~v~~~~~~~ 93 (267)
T 3h3e_A 63 KDVLISHGHYDHAGGLLYL-----SGKRVWLRKEAL 93 (267)
T ss_dssp SEEECSCSCHHHHGGGGGC-----CSCEEEEEGGGG
T ss_pred CEEEECCCChhhhCCHHHh-----cCCEEEECHHHH
Confidence 99999999 999999988 368999997664
No 72
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=30.09 E-value=43 Score=36.61 Aligned_cols=39 Identities=3% Similarity=-0.183 Sum_probs=34.9
Q ss_pred ceeeeEEEEecccCCCCHHHHHHhhhhcCCCCceeEeeecc
Q 009999 473 KPISMKASESSTLTKDTATEVSSVSRGMEDSCQFFRCYFIL 513 (520)
Q Consensus 473 ~~v~~~v~~~~~s~Had~~~l~~~i~~~~p~~~~~~~~~~~ 513 (520)
..++|+|..+.|++-+|...|..+|..++|+ +++-+++.
T Consensus 649 v~~~c~v~fiD~~g~~D~rs~~~i~~~~~Pr--klilv~g~ 687 (717)
T 2i7x_A 649 VQLKCSVVILNLQSLVDQRSASIIWPSLKSR--KIVLSAPK 687 (717)
T ss_dssp EEECSEEEECCCCCSCCHHHHHHHGGGSCCS--EEEECSCG
T ss_pred EEEEEEEEEEecCCCCcHHHHHHHHHhcCCc--EEEEeCCC
Confidence 4689999999999999999999999999999 66777664
No 73
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=24.10 E-value=64 Score=26.96 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHHHH
Q 009999 316 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAIFM 353 (520)
Q Consensus 316 ~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~~~ 353 (520)
..+++.+.+.|+.||.+++-.+......+++..+...+
T Consensus 116 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 153 (180)
T 1ej0_A 116 ELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLF 153 (180)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHHE
T ss_pred HHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHhh
Confidence 34567788889999999998777777777777775543
No 74
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=23.05 E-value=92 Score=27.38 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhcCCeEEEecCChHHHHHHHHHHHH
Q 009999 316 AFICSCAIDSVKAGGSVLIPINRVGVFLQLLEQIAI 351 (520)
Q Consensus 316 ~~l~~~I~~tl~~gG~VLIP~~~~Gr~qEll~~L~~ 351 (520)
...++.+.+.|+.||+.++-+|..+...+++..|..
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~ 154 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRK 154 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGG
T ss_pred HHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHH
Confidence 344567778899999999999988877787777743
Done!