Your job contains 1 sequence.
>010002
MWDLNDSLKDIEESEACSSQKTSIDGDDEKGKQVGSVSNSSSSAVVIENGSDEEIGASER
RLLSRSGGSKIFGVCLYQEAMEESEPEPPVTRQFFPVDFQEQQATSSEAGAGGLAFPRAN
WVGVKFCQSEPIVEAGKSVIEAPQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDSG
KQVYLGGFDTAHAAARAYDRAAIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRR
QSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNG
KDAVTNFDPSLYQDELKASGHGVDHNLDLSLGSSASNQQSSADFANRMQYTVMERPAPAS
LPNEVDWHNRGYRPKQQQEAYSRQHDLPYKRDGYSEAETMQLLSQTHLQSPASSSLNKSS
EMQRYEQFRRSGESHLLHMVPPQCNQSNYQTHQLTPGSSKRGRIGNELSLSTNDHHQQWQ
SGPHMFATAAASSGFPQQIRSSHSQNWLQNNGFHSLVRPS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010002
(520 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2005493 - symbol:AP2 "APETALA 2" species:3702 ... 872 1.0e-99 3
TAIR|locus:2155598 - symbol:TOE3 "target of early activat... 752 1.0e-80 3
TAIR|locus:2173009 - symbol:AIL5 "AINTEGUMENTA-like 5" sp... 402 1.9e-37 1
TAIR|locus:2137559 - symbol:ANT "AINTEGUMENTA" species:37... 399 3.9e-37 1
TAIR|locus:2082732 - symbol:SMZ "SCHLAFMUTZE" species:370... 374 5.1e-37 2
TAIR|locus:2030265 - symbol:AT1G72570 species:3702 "Arabi... 396 8.0e-37 1
TAIR|locus:2008216 - symbol:PLT2 "PLETHORA 2" species:370... 394 1.3e-36 1
TAIR|locus:2178915 - symbol:BBM "BABY BOOM" species:3702 ... 395 1.5e-36 1
TAIR|locus:2091891 - symbol:PLT1 "PLETHORA 1" species:370... 391 3.5e-36 1
TAIR|locus:2155680 - symbol:AIL7 "AINTEGUMENTA-like 7" sp... 389 4.4e-36 1
TAIR|locus:2017829 - symbol:WRI4 "WRINKLED 4" species:370... 383 1.9e-35 1
TAIR|locus:2200477 - symbol:ADAP "ARIA-interacting double... 381 3.1e-35 1
TAIR|locus:2056048 - symbol:SNZ "SCHNARCHZAPFEN" species:... 333 3.8e-30 1
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 125 6.9e-09 2
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 138 1.4e-08 1
TAIR|locus:2148022 - symbol:SHN2 "shine2" species:3702 "A... 137 5.5e-08 1
TAIR|locus:1005716457 - symbol:RAP2.9 "related to AP2 9" ... 126 2.9e-07 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 144 4.4e-07 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 124 4.7e-07 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 133 9.0e-07 1
TAIR|locus:2198978 - symbol:AT1G80580 species:3702 "Arabi... 138 9.8e-07 1
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 121 9.9e-07 1
TAIR|locus:2015061 - symbol:AT1G22190 species:3702 "Arabi... 134 3.1e-06 1
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 116 3.4e-06 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 132 4.2e-06 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 113 7.2e-06 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 120 1.0e-05 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 131 1.4e-05 1
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 131 1.4e-05 1
TAIR|locus:2825842 - symbol:RAP2.1 "related to AP2 1" spe... 111 2.4e-05 1
TAIR|locus:2154272 - symbol:CRF3 "AT5G53290" species:3702... 125 2.5e-05 2
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 125 3.4e-05 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 127 3.6e-05 1
TAIR|locus:2128429 - symbol:CRF2 "AT4G23750" species:3702... 127 3.8e-05 1
TAIR|locus:2092339 - symbol:ERF7 "ethylene response facto... 123 4.6e-05 1
TAIR|locus:2051359 - symbol:ERF53 "ERF domain 53" species... 126 4.7e-05 1
UNIPROTKB|Q5MFV2 - symbol:BIERF2 "BTH-induced ERF transcr... 121 6.9e-05 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 112 8.3e-05 1
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 117 8.8e-05 1
TAIR|locus:2146248 - symbol:AT5G18450 species:3702 "Arabi... 109 9.0e-05 2
TAIR|locus:2123708 - symbol:AT4G28140 species:3702 "Arabi... 122 9.7e-05 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 117 0.00011 1
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 123 0.00012 1
TAIR|locus:2005490 - symbol:ABI4 "ABA INSENSITIVE 4" spec... 122 0.00012 1
TAIR|locus:2034295 - symbol:AT1G36060 species:3702 "Arabi... 121 0.00015 1
TAIR|locus:2009655 - symbol:ERF8 "ethylene response facto... 114 0.00017 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 112 0.00022 2
TAIR|locus:2094897 - symbol:AT3G16280 species:3702 "Arabi... 116 0.00027 1
TAIR|locus:2151591 - symbol:ERF104 "ethylene response fac... 116 0.00028 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 115 0.00029 1
TAIR|locus:2195985 - symbol:AT1G77200 species:3702 "Arabi... 116 0.00034 2
TAIR|locus:2136078 - symbol:CRF1 "AT4G11140" species:3702... 116 0.00044 1
TAIR|locus:2029491 - symbol:RAP2.4 "related to AP2 4" spe... 117 0.00047 1
TAIR|locus:2008021 - symbol:ERF3 "ethylene responsive ele... 113 0.00051 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 111 0.00058 1
TAIR|locus:2176187 - symbol:AT5G51190 species:3702 "Arabi... 112 0.00064 1
TAIR|locus:2170101 - symbol:ERF110 "ethylene response fa... 111 0.00082 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 99 0.00093 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 103 0.00094 2
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 872 (312.0 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 177/276 (64%), Positives = 192/276 (69%)
Query: 88 PPVTRQFFPVDFQEQQATSSEAGAGGLA--FPRANWVGVKFCQSEPIV--EAGKS----- 138
P VT QFFP ++ GG+A FPRA+W GVKFCQS+ AGK+
Sbjct: 59 PLVTHQFFP---------EMDSNGGGVASGFPRAHWFGVKFCQSDLATGSSAGKATNVAA 109
Query: 139 -VIEAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXX 197
V+E QPLKK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT
Sbjct: 110 AVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARA 169
Query: 198 XXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL 257
IKFRG EADINF+I+DY+DDLKQM+NLTKEEFVHVLRRQSTGFPRGSSKYRGVTL
Sbjct: 170 YDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTL 229
Query: 258 HKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 317
HKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYD+AA+KCNGKDAVTNFDPS+Y +EL
Sbjct: 230 HKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELN 289
Query: 318 ASGHG-----VDHNLDXXXXXXXXXXXXXXDFANRM 348
A G DHNLD D RM
Sbjct: 290 AESSGNPTTPQDHNLDLSLGNSANSKHKSQDMRLRM 325
Score = 102 (41.0 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 43/123 (34%), Positives = 62/123 (50%)
Query: 412 ASSSLNKSSEMQ-RYEQFRRSG--ESHLLHMVPP-QCNQSNYQTHQLTPGSSKRGRIGN- 466
+++S +KS +M+ R Q ++ + +L + N + HQ PGSS G G
Sbjct: 311 SANSKHKSQDMRLRMNQQQQDSLHSNEVLGLGQTGMLNHTPNSNHQF-PGSSNIGSGGGF 369
Query: 467 ELSLSTNDHHQQWQSGPHMFAT-AAASSGF-PQ---QIRSSHS---QNWLQNNGFHS-LV 517
L + +H ++ + T AAASSGF P QI +S S QNWLQ NGF L+
Sbjct: 370 SLFPAAENHRFDGRASTNQVLTNAAASSGFSPHHHNQIFNSTSTPHQNWLQTNGFQPPLM 429
Query: 518 RPS 520
RPS
Sbjct: 430 RPS 432
Score = 49 (22.3 bits), Expect = 1.0e-99, Sum P(3) = 1.0e-99
Identities = 14/54 (25%), Positives = 22/54 (40%)
Query: 1 MWDLNDSLKDIEESEACSSQKTSIDGDDEKGKQXXXXXXXXXXXXXIENGSDEE 54
MWDLND+ + E S++ K+ IE+GSD++
Sbjct: 1 MWDLNDAPHQTQREE--ESEEFCYSSPS---KRVGSFSNSSSSAVVIEDGSDDD 49
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 752 (269.8 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 153/241 (63%), Positives = 166/241 (68%)
Query: 89 PVTRQFFPVDFQEQQATSSEAGAGGLAFPRANWVGVKFCQSEPIVEAGKSVIEAPQPLKK 148
PVTR FFP A S E G F N VG +S+P E P+KK
Sbjct: 40 PVTRNFFP-------AQSMEPGVRWSGF---NSVG----KSDPSGSGRPEEPEISPPIKK 85
Query: 149 XXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFRGA 208
QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKFRG
Sbjct: 86 SRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGV 145
Query: 209 EADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMG 268
+ADINF IEDY DDLKQM NLTKEEF+HVLRRQSTGFPRGSSKYRGVTLHKCGRWE+R+G
Sbjct: 146 DADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLG 205
Query: 269 QFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGV--DHN 326
QFL KKYVYLGLFDTE+EAARAYD+AA+KCNGKDAVTNFDP +Y++E S HN
Sbjct: 206 QFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTRNGHN 265
Query: 327 L 327
L
Sbjct: 266 L 266
Score = 46 (21.3 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 1 MWDLNDSLKDIEESEA 16
MW+LNDS EES++
Sbjct: 1 MWNLNDSPDHHEESDS 16
Score = 44 (20.5 bits), Expect = 1.0e-80, Sum P(3) = 1.0e-80
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 464 IGNELSLS-----TNDHHQQWQSGPHMFATAAASSGF-PQ 497
+G++LSL+ QQ G + AASSGF PQ
Sbjct: 298 LGSDLSLAMMTTTVRSEKQQSDGGGNRVVGMAASSGFSPQ 337
>TAIR|locus:2173009 [details] [associations]
symbol:AIL5 "AINTEGUMENTA-like 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0060771 "phyllotactic patterning" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=ISS;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009845
HOGENOM:HOG000239258 KO:K09285 EMBL:AY585685 EMBL:AB016891
IPI:IPI00518096 RefSeq:NP_200549.2 UniGene:At.29336
ProteinModelPortal:Q6PQQ3 SMR:Q6PQQ3 EnsemblPlants:AT5G57390.1
GeneID:835845 KEGG:ath:AT5G57390 GeneFarm:2582 TAIR:At5g57390
eggNOG:NOG258934 InParanoid:Q6PQQ3 OMA:WINNNIS PhylomeDB:Q6PQQ3
ProtClustDB:CLSN2681678 Genevestigator:Q6PQQ3 GO:GO:0060771
GO:GO:0040019 Uniprot:Q6PQQ3
Length = 558
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 89/194 (45%), Positives = 119/194 (61%)
Query: 138 SVIEA-PQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS----------GKQVYLG 186
+V EA P P KK YRGVT +R TGR+E+H+WD+ G+QVYLG
Sbjct: 182 AVSEASPTP-KKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLG 240
Query: 187 GFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFP 246
G+D +K+ G NF I +YE +L++M ++T++EFV LRR+S+GF
Sbjct: 241 GYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFS 300
Query: 247 RGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVT 305
RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G +AVT
Sbjct: 301 RGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVT 360
Query: 306 NFDPSLYQDELKAS 319
NFD S Y + AS
Sbjct: 361 NFDISRYDVKSIAS 374
Score = 146 (56.5 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 44/108 (40%), Positives = 56/108 (51%)
Query: 224 KQMSN-LTKEEFVHVLRRQSTGFPRGSSKYRGVTLHK-CGRWEA--------RMGQFLGK 273
KQ N L E ++ F + +S YRGVT H+ GR+EA R GQ
Sbjct: 175 KQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKG 234
Query: 274 KYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGH 321
+ VYLG +D E +AARAYD AA+K G TNF S Y+ EL+ H
Sbjct: 235 RQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKH 282
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 85/204 (41%), Positives = 122/204 (59%)
Query: 128 QSEPIVEAGKSVIEAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS-------- 179
Q + +V K ++ +K QYRGVT +R TGR+E+H+WD+
Sbjct: 257 QEDVVVVGQKQIVH-----RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSFKKEGHS 311
Query: 180 --GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHV 237
G+QVYLGG+D +K+ G NFS E+Y+ +++ M N+T++E+V
Sbjct: 312 RKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHTNFSAENYQKEIEDMKNMTRQEYVAH 371
Query: 238 LRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAV 296
LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD AA+
Sbjct: 372 LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAI 431
Query: 297 KCNGKDAVTNFDPSLYQ-DELKAS 319
K G +AVTNFD + Y D + +S
Sbjct: 432 KFRGTNAVTNFDITRYDVDRIMSS 455
Score = 118 (46.6 bits), Expect = 0.00082, P = 0.00082
Identities = 29/71 (40%), Positives = 36/71 (50%)
Query: 160 YRGVTFYRRTGRWESHIWD-SG-KQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIE 217
YRGVT + + GRW++ I +G K +YLG F T IKFRG A NF I
Sbjct: 386 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNFDIT 445
Query: 218 DYEDDLKQMSN 228
Y+ D SN
Sbjct: 446 RYDVDRIMSSN 456
>TAIR|locus:2082732 [details] [associations]
symbol:SMZ "SCHLAFMUTZE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009658
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AY576275 EMBL:AY560886
EMBL:BT026352 IPI:IPI00547287 IPI:IPI00846149 PIR:T06721
RefSeq:NP_001078290.1 RefSeq:NP_191059.2 UniGene:At.50279
ProteinModelPortal:Q6PV68 SMR:Q6PV68 STRING:Q6PV68
EnsemblPlants:AT3G54990.1 GeneID:824664 KEGG:ath:AT3G54990
TAIR:At3g54990 eggNOG:NOG270704 HOGENOM:HOG000293136
InParanoid:Q6PV68 OMA:DADINFV PhylomeDB:Q6PV68
ProtClustDB:CLSN2681587 ArrayExpress:Q6PV68 Genevestigator:Q6PV68
Uniprot:Q6PV68
Length = 346
Score = 374 (136.7 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 85/179 (47%), Positives = 101/179 (56%)
Query: 146 LKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKF 205
+KK QYRGVTFYRRTGRWESHIWD GKQVYLGGFDT IKF
Sbjct: 109 VKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYAAARAYDRAAIKF 168
Query: 206 RGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEA 265
RG +ADINF ++DY D+ +M NL K EFV LRR+S F RGSSKY+G+ L KC
Sbjct: 169 RGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCT---- 224
Query: 266 RMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCN--GK-DAVTNFDPSLYQDELKASGH 321
QF K + + LF R +D AA+K N GK + F +K +GH
Sbjct: 225 ---QF--KTHDQIHLFQN-----RGWDAAAIKYNELGKGEGAMKFGA-----HIKGNGH 268
Score = 173 (66.0 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 47/111 (42%), Positives = 66/111 (59%)
Query: 208 AEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRG-SSKYRGVTLHK-CGRWEA 265
A +I FS+ED +S+L + ++++ G PR SS+YRGVT ++ GRWE+
Sbjct: 82 ARRNIEFSVED--SHWLNLSSLQRNT-QKMVKKSRRG-PRSRSSQYRGVTFYRRTGRWES 137
Query: 266 RMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDEL 316
+ GK+ VYLG FDT AARAYDRAA+K G DA NF Y+ ++
Sbjct: 138 HIWD-CGKQ-VYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDI 186
Score = 49 (22.3 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 384 QHDLPYKRDGYSEAETMQLLSQTHLQSPASSSLNKSSEMQRYEQFRRSGESHL 436
+HD+ K ++ E +Q L + SS K +Q+ QF+ + HL
Sbjct: 183 RHDID-KMKNLNKVEFVQTLRRESASFGRGSSKYKGLALQKCTQFKTHDQIHL 234
Score = 40 (19.1 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 488 TAAASSGFP 496
T AASSGFP
Sbjct: 321 TVAASSGFP 329
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 84/200 (42%), Positives = 121/200 (60%)
Query: 130 EPIV--EAGKSVIEAPQPL----KKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS---- 179
EP+ E K ++ PQ +K QYRGVT +R TGR+E+H+WD+
Sbjct: 188 EPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKK 247
Query: 180 ------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEE 233
G+QVYLGG+D +K+ G +NF + +YE ++++++N+ ++E
Sbjct: 248 EGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQE 307
Query: 234 FVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYD 292
FV +LRR S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD
Sbjct: 308 FVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYD 367
Query: 293 RAAVKCNGKDAVTNFDPSLY 312
AA+K G +AVTNFD + Y
Sbjct: 368 IAAIKFRGLNAVTNFDINRY 387
Score = 138 (53.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 41/120 (34%), Positives = 67/120 (55%)
Query: 209 EADINFSIED-YEDDLKQMSNLTKEEFVHVLRRQST-GFPRGSSKYRGVTLHK-CGRWEA 265
E++++ +E+ + D K+ + K + + R+S + + +S+YRGVT H+ GR+EA
Sbjct: 179 ESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEA 238
Query: 266 RM--------GQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 317
+ GQ + VYLG +D E +AARAYD AA+K G NF S Y+ E++
Sbjct: 239 HLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIE 298
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 84/195 (43%), Positives = 122/195 (62%)
Query: 135 AGKSVIEAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS----------GKQVY 184
+G +++EA P ++ YRGVT +R TGR+E+H+WD+ G+QVY
Sbjct: 168 SGGAIVEAT-P-RRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVY 225
Query: 185 LGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTG 244
LGG+D +K+ G NF I +YE ++++M N+T++EFV +RR+S+G
Sbjct: 226 LGGYDKEEKAARAYDLAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSG 285
Query: 245 FPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDA 303
F RG+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +A
Sbjct: 286 FSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNA 345
Query: 304 VTNFDPSLYQDELKA 318
VTNF+ + Y ++KA
Sbjct: 346 VTNFEINRY--DVKA 358
>TAIR|locus:2178915 [details] [associations]
symbol:BBM "BABY BOOM" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009887 "organ
morphogenesis" evidence=ISS;IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL391142
HOGENOM:HOG000239258 KO:K09285 EMBL:AF317907 EMBL:AY585684
IPI:IPI00523422 PIR:T51580 RefSeq:NP_197245.2 UniGene:At.50710
ProteinModelPortal:Q6PQQ4 SMR:Q6PQQ4 STRING:Q6PQQ4
EnsemblPlants:AT5G17430.1 GeneID:831609 KEGG:ath:AT5G17430
TAIR:At5g17430 eggNOG:NOG311645 InParanoid:Q6PQQ4 OMA:EIAYNAR
PhylomeDB:Q6PQQ4 ProtClustDB:CLSN2925597 ArrayExpress:Q6PQQ4
Genevestigator:Q6PQQ4 GermOnline:AT5G17430 Uniprot:Q6PQQ4
Length = 584
Score = 395 (144.1 bits), Expect = 1.5e-36, P = 1.5e-36
Identities = 110/396 (27%), Positives = 182/396 (45%)
Query: 129 SEPIVEAGKSVIEAPQPL-KKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS-------- 179
++ +V+ K++++ + KK YRGVT +R TGR+E+H+WD+
Sbjct: 180 NDDVVQE-KTIVDVVETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQT 238
Query: 180 --GKQVYLGGFDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHV 237
G+QVYLGG+D +K+ G NF + +YE ++++M ++T++E+V
Sbjct: 239 RKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVAS 298
Query: 238 LRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAV 296
LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD AA+
Sbjct: 299 LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAI 358
Query: 297 KCNGKDAVTNFDPSLYQDELKASGHGVDHNLDXXXXXXXXXXXXXXDFANRMQYTVMERP 356
K G AVTNFD + Y +KA L+ D N + ++
Sbjct: 359 KFRGLSAVTNFDMNRYN--VKAI-------LESPSLPIGSSAKRLKDVNNPVPAMMISNN 409
Query: 357 APASLPNEVDWHNRGYRPKQQQEA--YSRQHD--LPYKRDGYSEAETMQLLSQTHLQSPA 412
S N W N ++ Q + +Q + + Y G E+ ++ + +
Sbjct: 410 VSESANNVSGWQNTAFQHHQGMDLSLLQQQQERYVGYYNGGNLSTESTRVCFKQE-EEQQ 468
Query: 413 SSSLNKSSEMQRYEQFRRSGESHLLHMVPPQCNQSNYQTHQLTPGSSKRGR--IGNELSL 470
N S M + + + + + + YQ + G+S E++
Sbjct: 469 HFLRNSPSHMTNVDHHSSTSDDSVT-VCGNVVSYGGYQGFAIPVGTSVNYDPFTAAEIAY 527
Query: 471 STNDHHQQWQSGPHMFATAAASSGFPQQIRSSHSQN 506
+ +H+ Q + FP I ++HS N
Sbjct: 528 NARNHYYYAQHQQQQQIQQSPGGDFPVAISNNHSSN 563
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 391 (142.7 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/192 (42%), Positives = 119/192 (61%)
Query: 138 SVIEAPQPLKKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDS----------GKQVYLGG 187
+V+E P ++ YRGVT +R TGR+E+H+WD+ G+QVYLGG
Sbjct: 161 AVVETATP-RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGG 219
Query: 188 FDTXXXXXXXXXXXXIKFRGAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPR 247
+D +K+ G NF I +YE ++++M ++T++EFV +RR+S+GF R
Sbjct: 220 YDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSR 279
Query: 248 GSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTN 306
G+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTN
Sbjct: 280 GASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTN 339
Query: 307 FDPSLYQDELKA 318
F+ + Y ++KA
Sbjct: 340 FEINRY--DVKA 349
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 38/92 (41%), Positives = 51/92 (55%)
Query: 239 RRQSTGFPRGSSKYRGVTLHK-CGRWEA--------RMGQFLGKKYVYLGLFDTEVEAAR 289
RR F + +S YRGVT H+ GR+EA R GQ + VYLG +D E +AAR
Sbjct: 169 RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAAR 228
Query: 290 AYDRAAVKCNGKDAVTNFDPSLYQDELKASGH 321
+YD AA+K G TNF + Y+ E++ H
Sbjct: 229 SYDLAALKYWGPSTTTNFPITNYEKEVEEMKH 260
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 79/167 (47%), Positives = 110/167 (65%)
Query: 160 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAE 209
YRGVT +R TGR+E+H+WD+ G+QVYLGG+D +K+ G+
Sbjct: 232 YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGST 291
Query: 210 ADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMG 268
A NF + Y +L++M+++TK+EF+ LRR+S+GF RG+S YRGVT H + GRW+AR+G
Sbjct: 292 ATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIG 351
Query: 269 QFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 315
+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y E
Sbjct: 352 RVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIE 398
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 39/101 (38%), Positives = 54/101 (53%)
Query: 224 KQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWE---ARMGQFLGKKYVYLGL 280
K+ S+ +K++ V L Q T RG +++R ++ W+ R GQ + VYLG
Sbjct: 211 KETSDDSKKKIVETLG-QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGG 269
Query: 281 FDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGH 321
+D E AARAYD AA+K G A TNF S Y EL+ H
Sbjct: 270 YDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNH 310
>TAIR|locus:2017829 [details] [associations]
symbol:WRI4 "WRINKLED 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IPI]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IGI;IMP] [GO:1901959 "positive regulation of
cutin biosynthetic process" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 KO:K09285 HOGENOM:HOG000238389 EMBL:AC010793
UniGene:At.21701 UniGene:At.48398 IPI:IPI00846298
RefSeq:NP_001077849.1 ProteinModelPortal:A8MQS2 SMR:A8MQS2
STRING:A8MQS2 EnsemblPlants:AT1G79700.2 GeneID:844309
KEGG:ath:AT1G79700 OMA:GKLATEE ProtClustDB:CLSN2680813
Genevestigator:A8MQS2 Uniprot:A8MQS2
Length = 313
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 77/164 (46%), Positives = 105/164 (64%)
Query: 160 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAE 209
YRGVT +R TGR+E+H+WD G+QVYLG +D +K+ G +
Sbjct: 53 YRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRD 112
Query: 210 ADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKC-GRWEARMG 268
+NF + Y++D+K+M +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G
Sbjct: 113 TLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIG 172
Query: 269 QFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 312
+ G KY+YLG + T+ EAA AYD AA++ G +AVTNFD S Y
Sbjct: 173 RVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDVSRY 216
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 249 SSKYRGVTLHK-CGRWEARMG--------QFLGKKYVYLGLFDTEVEAARAYDRAAVKCN 299
SS YRGVT H+ GR+EA + Q + VYLG +D E AARAYD AA+K
Sbjct: 50 SSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYW 109
Query: 300 GKDAVTNFDPSLYQDELK 317
G+D + NF Y +++K
Sbjct: 110 GRDTLLNFPLPSYDEDVK 127
>TAIR|locus:2200477 [details] [associations]
symbol:ADAP "ARIA-interacting double AP2 domain protein"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0010187
"negative regulation of seed germination" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IPI] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IGI;IMP] [GO:1901959 "positive
regulation of cutin biosynthetic process" evidence=IGI] [GO:0009887
"organ morphogenesis" evidence=ISS] [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010187
GO:GO:0040008 KO:K09285 EMBL:AC010924 EMBL:AY045915 EMBL:AY133880
IPI:IPI00524024 IPI:IPI00535618 PIR:D86295 RefSeq:NP_563990.1
RefSeq:NP_973839.1 UniGene:At.11854 ProteinModelPortal:Q94AN4
SMR:Q94AN4 IntAct:Q94AN4 PRIDE:Q94AN4 EnsemblPlants:AT1G16060.1
GeneID:838176 KEGG:ath:AT1G16060 TAIR:At1g16060 eggNOG:NOG326907
HOGENOM:HOG000238389 InParanoid:Q94AN4 OMA:MESQSKE PhylomeDB:Q94AN4
ProtClustDB:CLSN2917011 Genevestigator:Q94AN4 Uniprot:Q94AN4
Length = 345
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 77/164 (46%), Positives = 107/164 (65%)
Query: 160 YRGVTFYRRTGRWESHIWDS----------GKQVYLGGFDTXXXXXXXXXXXXIKFRGAE 209
+RGVT +R TGR+E+H+WD G+QVYLG +D +K+ G +
Sbjct: 59 HRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRD 118
Query: 210 ADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKC-GRWEARMG 268
+NF + +YE+D+K+M + +KEE++ LRR+S+GF RG SKYRGV H GRWEAR+G
Sbjct: 119 TILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIG 178
Query: 269 QFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 312
+ G KY+YLG + T+ EAA AYD AA++ G +AVTNFD S Y
Sbjct: 179 RVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDISRY 222
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 35/81 (43%), Positives = 49/81 (60%)
Query: 246 PRGSSKYRGVTLHK-CGRWEARM------GQFLGKK--YVYLGLFDTEVEAARAYDRAAV 296
P+ SS +RGVT H+ GR+EA + + KK VYLG +D E AARAYD AA+
Sbjct: 53 PQRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLGAYDEEDAAARAYDLAAL 112
Query: 297 KCNGKDAVTNFDPSLYQDELK 317
K G+D + NF Y++++K
Sbjct: 113 KYWGRDTILNFPLCNYEEDIK 133
>TAIR|locus:2056048 [details] [associations]
symbol:SNZ "SCHNARCHZAPFEN" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PROSITE:PS51032
SMART:SM00380 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC004697 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000293136 ProtClustDB:CLSN2681587 EMBL:AY576276
EMBL:AY062578 EMBL:AY093386 IPI:IPI00534560 IPI:IPI00866782
PIR:T02577 RefSeq:NP_850313.2 UniGene:At.27296
ProteinModelPortal:Q6PV67 SMR:Q6PV67 IntAct:Q6PV67 PaxDb:Q6PV67
PRIDE:Q6PV67 EnsemblPlants:AT2G39250.1 GeneID:818510
KEGG:ath:AT2G39250 TAIR:At2g39250 eggNOG:NOG298400
InParanoid:Q6PV67 OMA:THNEDED PhylomeDB:Q6PV67
Genevestigator:Q6PV67 Uniprot:Q6PV67
Length = 325
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 61/107 (57%), Positives = 71/107 (66%)
Query: 147 KKXXXXXXXXXXQYRGVTFYRRTGRWESHIWDSGKQVYLGGFDTXXXXXXXXXXXXIKFR 206
KK YRGVTFYRRTGRWESHIWD GKQVYLGGFDT I+FR
Sbjct: 96 KKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAYTAARAYDRAAIRFR 155
Query: 207 GAEADINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYR 253
G +ADINF ++DY+ D+++M NL+KEEFV LRR S RG SKY+
Sbjct: 156 GLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYK 202
Score = 165 (63.1 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 43/98 (43%), Positives = 60/98 (61%)
Query: 222 DLKQMSNLTKEEFVHVLRRQSTGFPRG-SSKYRGVTLHK-CGRWEARMGQFLGKKYVYLG 279
DL M K+E + V++++S PR SS YRGVT ++ GRWE+ + GK+ VYLG
Sbjct: 80 DLSSMQR-NKQETL-VMKKKSRRGPRSRSSHYRGVTFYRRTGRWESHIWD-CGKQ-VYLG 135
Query: 280 LFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 317
FDT AARAYDRAA++ G A NF Y+ +++
Sbjct: 136 GFDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIE 173
Score = 56 (24.8 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 24/96 (25%), Positives = 43/96 (44%)
Query: 384 QHDLPYKRDGYSE-AETMQLLSQTH-LQSPASSSLNKSSEMQRYEQFR-RSGESHL---- 436
Q D+ + D Y + E M+ LS+ +QS +S + + +Y+ R+ HL
Sbjct: 158 QADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYKNTHMRNDHIHLFQNR 217
Query: 437 -LHMVPPQCNQSNYQTHQLTPGSSKRGRIGNELSLS 471
L+ +CN+ + G+ +G N+L LS
Sbjct: 218 GLNAAAAKCNEIRKMEGDIKLGAHSKGNEHNDLELS 253
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 125 (49.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 251 KYRGVTLHKCGRW--EARMGQFLGK-KYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
K+RGV G+W E R G+ G+ + ++LG F+T EAA AYD AA++ G DA TNF
Sbjct: 74 KFRGVRQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133
Score = 37 (18.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 7 SLKDIEESEACSSQKTSIDGDDEKGKQ 33
S D+E +++ SS+ S +GK+
Sbjct: 8 SFTDMEATDSSSSEDESPPSSRRRGKK 34
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 249 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
S K+RGV + G W + + L K+ V+LG FDT AARAYD+AAV NG+ A TNF
Sbjct: 4 SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNF 62
>TAIR|locus:2148022 [details] [associations]
symbol:SHN2 "shine2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL360314 HOGENOM:HOG000237624
EMBL:AY560865 IPI:IPI00534793 RefSeq:NP_196680.1 UniGene:At.70314
ProteinModelPortal:Q9LFN7 SMR:Q9LFN7 PRIDE:Q9LFN7
EnsemblPlants:AT5G11190.1 GeneID:830989 KEGG:ath:AT5G11190
TAIR:At5g11190 eggNOG:NOG292617 InParanoid:Q9LFN7 OMA:DQLAMEM
PhylomeDB:Q9LFN7 ProtClustDB:CLSN2692546 Genevestigator:Q9LFN7
Uniprot:Q9LFN7
Length = 189
Score = 137 (53.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 249 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFD 308
S K+RGV + G W + + L K+ V+LG F+T AARAYD+AA+ NG++A TNF
Sbjct: 4 SRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNF- 62
Query: 309 PSLYQDELKASGHGVDHN 326
P + +E S H D N
Sbjct: 63 PVVKSEE--GSDHVKDVN 78
>TAIR|locus:1005716457 [details] [associations]
symbol:RAP2.9 "related to AP2 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AB073166 EMBL:AY560869 EMBL:BT024689 EMBL:AF003102 EMBL:Z37270
IPI:IPI00535753 RefSeq:NP_849340.1 UniGene:At.47204
ProteinModelPortal:Q8W3M3 SMR:Q8W3M3 EnsemblPlants:AT4G06746.1
GeneID:826148 KEGG:ath:AT4G06746 TAIR:At4g06746 eggNOG:NOG320996
InParanoid:Q8W3M3 OMA:NKLPEAY PhylomeDB:Q8W3M3
ProtClustDB:CLSN2918026 Genevestigator:Q8W3M3 Uniprot:Q8W3M3
Length = 150
Score = 126 (49.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 224 KQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDT 283
KQ + KE V + + +Y+G+ + K G+W A + + + ++LG + T
Sbjct: 8 KQEFPMVKEGMVMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKT 67
Query: 284 EVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGVD 324
V AARAYD A G A NF +++D G G D
Sbjct: 68 AVAAARAYDTAVFYLRGPSARLNFPEEVFKDGNGGEGLGGD 108
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 229 LTKEEFVHV-LRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEA 287
L E V V + +S P SS+++GV GRW A++ + + V+LG F+ E EA
Sbjct: 40 LDSENGVEVEVEAESRKLP--SSRFKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEEDEA 95
Query: 288 ARAYDRAAVKCNGKDAVTNFDPSLYQDELK-ASGHGVDHNLD 328
ARAYD AA + G+DAVTNF + +++E++ + H +D
Sbjct: 96 ARAYDVAAHRFRGRDAVTNFKDTTFEEEVEFLNAHSKSEIVD 137
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 124 (48.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 27/57 (47%), Positives = 34/57 (59%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+YRGV GR+ A + K V+LG FDT EAARAYD+ A++ G A TNF
Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNF 75
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 133 (51.9 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 249 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+ K+RGV G W A + L K+ ++LG F+T EAARAYD AAV +G++A TNF
Sbjct: 4 TKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNF 62
>TAIR|locus:2198978 [details] [associations]
symbol:AT1G80580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC018849 EMBL:AY560844 EMBL:DQ446446 EMBL:BT026038
IPI:IPI00519694 PIR:H96837 RefSeq:NP_178173.1 UniGene:At.50665
ProteinModelPortal:Q9M8M5 SMR:Q9M8M5 EnsemblPlants:AT1G80580.1
GeneID:844397 KEGG:ath:AT1G80580 TAIR:At1g80580 eggNOG:NOG291220
HOGENOM:HOG000090320 InParanoid:Q9M8M5 OMA:KPEPENT PhylomeDB:Q9M8M5
ProtClustDB:CLSN2714206 Genevestigator:Q9M8M5 Uniprot:Q9M8M5
Length = 256
Score = 138 (53.6 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 37/99 (37%), Positives = 51/99 (51%)
Query: 219 YEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYL 278
+ D K +LTKE V ++ P+ + + GV GRW A + +G+ +L
Sbjct: 87 FGDKNKVSDHLTKEGGV----KRGRKMPQKTGGFMGVRKRPWGRWSAEIRDRIGRCRHWL 142
Query: 279 GLFDTEVEAARAYDRAAVKCNGKDAVTNFD-PSLYQDEL 316
G FDT EAARAYD AA + G A TNF P L+ E+
Sbjct: 143 GTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLFPKEI 181
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 121 (47.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 251 KYRGVTLHKCGRW--EARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFD 308
KYRGV G++ E R + G++ V+LG FDT +AARAYDRAA GK A+ NF
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGER-VWLGTFDTAEDAARAYDRAAYSMRGKAAILNF- 76
Query: 309 PSLY 312
P Y
Sbjct: 77 PHEY 80
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 42/156 (26%), Positives = 61/156 (39%)
Query: 219 YEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYL 278
Y DL S+ + V +++ T + + YRGV G+W A + + ++L
Sbjct: 51 YGSDLHSFSHHLSPKPVS-MKQTGTSAAKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWL 109
Query: 279 GLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGVDHNLDXXXXXXXXXX 338
G FDT EAA AYD+AA K G A NF + DE + VD L+
Sbjct: 110 GTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQSSVDAKLEAICQNLAETT 169
Query: 339 XXXXDFANRMQYTVMERPAPASLPNEVDWHNRGYRP 374
+ LP E D+ + G P
Sbjct: 170 QKQVRSTKKSSSRKRSSTVAVKLPEE-DYSSAGSSP 204
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 116 (45.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 251 KYRGVTLHKCGRW--EARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFD 308
KYRGV G++ E R + G++ V+LG FDT EAARAYD+AA G+ A+ NF
Sbjct: 14 KYRGVRRRPWGKYAAEIRDSRKHGER-VWLGTFDTAEEAARAYDQAAYSMRGQAAILNF- 71
Query: 309 PSLY 312
P Y
Sbjct: 72 PHEY 75
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 132 (51.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 47/154 (30%), Positives = 69/154 (44%)
Query: 215 SIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKK 274
S E + +K+ N+TK L G +YRGV GR+ A + + KK
Sbjct: 21 SKEVSDKGVKKRKNVTK-----ALAVNDGGEKSKEVRYRGVRRRPWGRYAAEIRDPVKKK 75
Query: 275 YVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGVDHNLDXXXXXX 334
V+LG F+T EAARAYD AA++ G A TNF P + + +S V++NL
Sbjct: 76 RVWLGSFNTGEEAARAYDSAAIRFRGSKATTNF-PLIGYYGI-SSATPVNNNLSETVSDG 133
Query: 335 XXXXXXXXDFANRM----QYTVMERPAPASLPNE 364
D N + T+ E +LP++
Sbjct: 134 NANLPLVGDDGNALASPVNNTLSETARDGTLPSD 167
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 113 (44.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 32/78 (41%), Positives = 43/78 (55%)
Query: 251 KYRGVTLHKCGRWEARMGQFL--GKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFD 308
KYRGV G++ A + G + V+LG F+T +AARAYDRAA G+ A+ NF
Sbjct: 13 KYRGVRKRPWGKYAAEIRDSARHGAR-VWLGTFNTAEDAARAYDRAAFGMRGQRAILNF- 70
Query: 309 PSLYQDELKASGHGVDHN 326
P YQ +K +G N
Sbjct: 71 PHEYQ-MMKDGPNGSHEN 87
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 120 (47.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/111 (31%), Positives = 50/111 (45%)
Query: 217 EDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYV 276
E L +S+ K + V V + G + YRG+ G+W A + V
Sbjct: 16 ESEPSQLGSVSSRKKRKPVSVSEERD-GKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRV 74
Query: 277 YLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGVDHNL 327
+LG F T EAARAYD AA+K G+ A NF + ++E G + L
Sbjct: 75 WLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNEL 125
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 249 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF- 307
SSKY+GV GRW A++ + + V+LG F+ E EAARAYD A + +DAVTNF
Sbjct: 59 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFK 116
Query: 308 DPSLYQDEL 316
D + +DE+
Sbjct: 117 DVKMDEDEV 125
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 238 LRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVK 297
L +S P SSKY+GV GRW A++ + + V+LG F+ + EAAR+YD AA +
Sbjct: 53 LETESRKLP--SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEQEEAARSYDIAACR 108
Query: 298 CNGKDAVTNFDPSLYQDEL 316
G+DAV NF L +L
Sbjct: 109 FRGRDAVVNFKNVLEDGDL 127
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSL 311
YRG+ K G+W A + + + ++LG + T++ AARAYD A G A NF L
Sbjct: 31 YRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPDLL 90
Query: 312 YQDE 315
Q+E
Sbjct: 91 LQEE 94
>TAIR|locus:2154272 [details] [associations]
symbol:CRF3 "AT5G53290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 EMBL:AB013388 GO:GO:0048825 GO:GO:0042991
HOGENOM:HOG000237664 EMBL:AY560878 EMBL:BT020244 EMBL:BT021136
IPI:IPI00543130 RefSeq:NP_200141.1 UniGene:At.49792
ProteinModelPortal:Q9FK12 SMR:Q9FK12 IntAct:Q9FK12 PRIDE:Q9FK12
EnsemblPlants:AT5G53290.1 GeneID:835410 KEGG:ath:AT5G53290
TAIR:At5g53290 eggNOG:NOG331684 InParanoid:Q9FK12 OMA:NEITVEP
PhylomeDB:Q9FK12 ProtClustDB:CLSN2686526 Genevestigator:Q9FK12
Uniprot:Q9FK12
Length = 354
Score = 125 (49.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFD-P 309
K+RGV G+W A + ++ ++LG F+T EAA YD AA++ G DA+TNF P
Sbjct: 124 KFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIP 183
Query: 310 SLYQDE 315
++E
Sbjct: 184 PQEEEE 189
Score = 45 (20.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 407 HLQSPASSSLNKSSEMQRYEQ 427
HL SP S ++S E+Q+ +Q
Sbjct: 223 HLSSPTSVLNHRSEEIQQVQQ 243
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/113 (31%), Positives = 54/113 (47%)
Query: 211 DINFSIEDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQF 270
D + + ++ E D + + T + H S G + SS+Y+G+ GRW A +
Sbjct: 37 DFDGNFDELESDEPFVFSSTHKH--HASGSASDGKKKQSSRYKGIRRRPWGRWAAEIRDP 94
Query: 271 LGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASGHGV 323
+ V+LG F+T EAARAYD A + G A NF P+ + KA V
Sbjct: 95 IKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF-PNESSGKRKAKAKTV 146
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 247 RGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTN 306
+ KYRGV G+W A + ++ ++LG F T EAA YD AA+K G DA+TN
Sbjct: 113 QNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTN 172
Query: 307 F 307
F
Sbjct: 173 F 173
>TAIR|locus:2128429 [details] [associations]
symbol:CRF2 "AT4G23750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA;IDA] [GO:0048825 "cotyledon development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048364 "root development" evidence=IEP] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161560 GO:GO:0048825 GO:GO:0042991
EMBL:AL035394 HOGENOM:HOG000237664 ProtClustDB:CLSN2685996
EMBL:AY057475 EMBL:AY140049 EMBL:BT015038 IPI:IPI00549106
PIR:T05607 RefSeq:NP_194106.1 RefSeq:NP_974599.1 UniGene:At.26323
UniGene:At.67317 ProteinModelPortal:Q9SUQ2 SMR:Q9SUQ2 IntAct:Q9SUQ2
EnsemblPlants:AT4G23750.1 EnsemblPlants:AT4G23750.2 GeneID:828475
KEGG:ath:AT4G23750 TAIR:At4g23750 eggNOG:NOG263971
InParanoid:Q9SUQ2 OMA:PRIKFTE PhylomeDB:Q9SUQ2
Genevestigator:Q9SUQ2 Uniprot:Q9SUQ2
Length = 343
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 248 GSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
G K+RGV G+W A + L + ++LG ++T EAA YD AA++ G DA+TNF
Sbjct: 118 GEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 177
>TAIR|locus:2092339 [details] [associations]
symbol:ERF7 "ethylene response factor 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0006952 GO:GO:0009873
GO:GO:0009414 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB024036
HOGENOM:HOG000237624 ProtClustDB:CLSN2682907 EMBL:AB032201
EMBL:AY037254 EMBL:AY094001 EMBL:AY085023 EMBL:AK228460
IPI:IPI00537654 RefSeq:NP_188666.1 UniGene:At.20161
ProteinModelPortal:Q9LDE4 SMR:Q9LDE4 IntAct:Q9LDE4 STRING:Q9LDE4
PaxDb:Q9LDE4 PRIDE:Q9LDE4 EnsemblPlants:AT3G20310.1 GeneID:821575
KEGG:ath:AT3G20310 TAIR:At3g20310 eggNOG:NOG322216
InParanoid:Q9LDE4 OMA:VAPEDCH PhylomeDB:Q9LDE4
Genevestigator:Q9LDE4 GermOnline:AT3G20310 Uniprot:Q9LDE4
Length = 244
Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 46/144 (31%), Positives = 65/144 (45%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF--- 307
+YRGV GR+ A + L K V+LG FD+ V+AARAYD AA G A TNF
Sbjct: 26 RYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPID 85
Query: 308 -DPS--------LYQDELKASGHGVDHNLDXXXXXXXXXXXXXXDFANRMQYTVMERPAP 358
PS L+ L S + + +D +F + Q ++ RPA
Sbjct: 86 CSPSSPLQPLTYLHNQNL-CSPPVIQNQIDPFMDHRLYGGG---NFQEQQQQQIISRPAS 141
Query: 359 ASLPNEVDWHNRGYRPKQQQEAYS 382
+S+ + V + G RP + A S
Sbjct: 142 SSMSSTVKSCS-GPRPMEAAAASS 164
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 126 (49.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 34/88 (38%), Positives = 47/88 (53%)
Query: 226 MSNLTKEEFVHVLRRQSTGFPRGSSK-YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTE 284
M N+ ++E L R P ++K YRGV G+W A + + + ++LG FDT
Sbjct: 161 MMNMLRQESDLPLTRPPVQ-PFSATKLYRGVRQRHWGKWVAEIRKPRNRTRLWLGTFDTA 219
Query: 285 VEAARAYDRAAVKCNGKDAVTNFDPSLY 312
EAA AYDR A K G+ A NF P L+
Sbjct: 220 EEAAMAYDREAFKLRGETARLNF-PELF 246
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 32/77 (41%), Positives = 38/77 (49%)
Query: 244 GFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDA 303
G G YRGV GR+ A + K V+LG +DT EAARAYD AA + G A
Sbjct: 26 GVGAGGPHYRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKA 85
Query: 304 VTNFDPSLYQDELKASG 320
TNF P Q + G
Sbjct: 86 KTNF-PFASQSMVGCGG 101
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 112 (44.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 251 KYRGVTLHKCGRWEARM----GQFLGKK-YVYLGLFDTEVEAARAYDRAAVKCNGKDAVT 305
KYRGV G+W A + G G++ ++LG F+T EAA AYD A++K G A T
Sbjct: 78 KYRGVRQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPT 137
Query: 306 NFD-PSLYQDELKASG 320
NF P+ Q++ G
Sbjct: 138 NFGLPAENQEDKTVIG 153
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 117 (46.2 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPS 310
KYRGV G+W A + V+LG F+T AARAYD AA++ G A NF +
Sbjct: 60 KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119
Query: 311 LYQDELKASGHGVDHNL 327
+ ++ + H + +++
Sbjct: 120 VGTQTIQRNSHFLQNSM 136
>TAIR|locus:2146248 [details] [associations]
symbol:AT5G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AC051626 EMBL:AY560853 EMBL:BT026074 IPI:IPI00546020
RefSeq:NP_197346.1 UniGene:At.64239 ProteinModelPortal:P61827
SMR:P61827 EnsemblPlants:AT5G18450.1 GeneID:831963
KEGG:ath:AT5G18450 GeneFarm:3680 TAIR:At5g18450 eggNOG:NOG239971
HOGENOM:HOG000112272 OMA:PENATCT ProtClustDB:CLSN2916324
Genevestigator:P61827 GermOnline:AT5G18450 Uniprot:P61827
Length = 307
Score = 109 (43.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 32/86 (37%), Positives = 42/86 (48%)
Query: 244 GFPRGSS-KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKD 302
G P ++ +RGV G+W A + + ++LG F+T VEAA AYD AA K G +
Sbjct: 25 GGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDEAAKKLYGHE 84
Query: 303 AVTNF-DPSLYQD-----ELKASGHG 322
A N P Q L SGHG
Sbjct: 85 AKLNLVHPQQQQQVVVNRNLSFSGHG 110
Score = 55 (24.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 410 SPASSSLNKSSEMQRYEQFRRSGESHLLHMVPPQCNQSNYQTHQLTPGSSKRGRIGNELS 469
S SS L + + + + S S+L ++P Q + + +T T G G+ L+
Sbjct: 141 SERSSFLQEDDD-HSHNRCSSSSGSNLCWLLPKQSDSQDQETVNATTSYGGEGGGGSTLT 199
Query: 470 LSTN 473
STN
Sbjct: 200 FSTN 203
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 122 (48.0 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 35/110 (31%), Positives = 55/110 (50%)
Query: 206 RGAEADINFSIEDYEDDLKQMS-------NLTKEEFVHVLRRQSTGFPRGSSK-YRGVTL 257
+G + I+FS + + + M+ NL+ + ++ Q P ++K YRGV
Sbjct: 89 QGQKQMISFSPQQQQQQQQYMAQYWSDTLNLSPRGRMMMMMSQEAVQPYIATKLYRGVRQ 148
Query: 258 HKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+ G+W A + + + ++LG FDT EAA AYDR A K G A NF
Sbjct: 149 RQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNF 198
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 227 SNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGK-KYVYLGLFDTEV 285
S T E V R+ T + YRGV G++ A + K ++LG F++++
Sbjct: 82 STTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDI 141
Query: 286 EAARAYDRAAVKCNGKDAVTNF 307
+AARAYD AA K G+ AV NF
Sbjct: 142 DAARAYDYAAFKLRGRKAVLNF 163
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 249 SSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
SSKY+GV GRW A++ + + V+LG F+ E EAA +YD A + G+DAVTNF
Sbjct: 69 SSKYKGVVPQPNGRWGAQI--YEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNF 125
>TAIR|locus:2005490 [details] [associations]
symbol:ABI4 "ABA INSENSITIVE 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009747
"hexokinase-dependent signaling" evidence=NAS] [GO:0006970
"response to osmotic stress" evidence=IMP] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IMP] [GO:0009749
"response to glucose stimulus" evidence=IMP] [GO:0010896
"regulation of triglyceride catabolic process" evidence=IMP]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0005983 "starch catabolic process" evidence=NAS] [GO:0010353
"response to trehalose stimulus" evidence=IMP] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IDA;IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IPI]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0032880 "regulation of protein
localization" evidence=IDA] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0010449 "root meristem growth" evidence=IMP]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=IEP] [GO:0048316 "seed development" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009738
GO:GO:0009873 GO:GO:0009414 GO:GO:0009749 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0032880 GO:GO:0006351
GO:GO:0048527 GO:GO:0010182 GO:GO:0006970 GO:GO:0031930
EMBL:AF040959 EMBL:AF085279 EMBL:AY560890 EMBL:DQ446612
EMBL:DQ653050 IPI:IPI00530730 PIR:G84826 RefSeq:NP_181551.1
UniGene:At.50594 ProteinModelPortal:A0MES8 SMR:A0MES8 STRING:A0MES8
EnsemblPlants:AT2G40220.1 GeneID:818614 KEGG:ath:AT2G40220
TAIR:At2g40220 eggNOG:NOG282672 HOGENOM:HOG000033770
InParanoid:A0MES8 KO:K09286 OMA:STSFHHE PhylomeDB:A0MES8
ProtClustDB:CLSN2913058 Genevestigator:A0MES8 GO:GO:0044212
GO:GO:0010896 GO:GO:0010353 GO:GO:0010449 GO:GO:0048316
GO:GO:0005983 Gene3D:3.30.730.10 SUPFAM:SSF54171 Uniprot:A0MES8
Length = 328
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 239 RRQSTGFPRGSS-KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVK 297
+R+ G P S +YRGV G+W A + + + +LG F T +AARAYDRAAV
Sbjct: 41 KRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVY 100
Query: 298 CNGKDAVTNFDPS 310
G A N PS
Sbjct: 101 LYGSRAQLNLTPS 113
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/71 (42%), Positives = 35/71 (49%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSL 311
YRGV G+W A + + ++LG FDT EAA AYDRAA K G A NF
Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALR 202
Query: 312 YQDELKASGHG 322
YQ S G
Sbjct: 203 YQTGSSPSDTG 213
>TAIR|locus:2009655 [details] [associations]
symbol:ERF8 "ethylene response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC008007 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000237624 ProtClustDB:CLSN2679790 EMBL:AB036884
EMBL:AK117541 EMBL:BT005401 IPI:IPI00546471 PIR:D96572
RefSeq:NP_175725.1 UniGene:At.4604 ProteinModelPortal:Q9MAI5
SMR:Q9MAI5 IntAct:Q9MAI5 EnsemblPlants:AT1G53170.1 GeneID:841751
KEGG:ath:AT1G53170 TAIR:At1g53170 eggNOG:NOG271218
InParanoid:Q9MAI5 OMA:HESNAAK PhylomeDB:Q9MAI5
Genevestigator:Q9MAI5 GermOnline:AT1G53170 Uniprot:Q9MAI5
Length = 185
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+YRGV GR+ A + + K V+LG FDT +AARAYD AA G A TNF
Sbjct: 30 RYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 112 (44.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 26/56 (46%), Positives = 31/56 (55%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
YRGV G+W A + V+LG F+T EAA AYDRAA+K G A NF
Sbjct: 39 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/82 (25%), Positives = 34/82 (41%)
Query: 355 RPAPASLPNEVDW---HNRGYRPKQQQEAYSRQHDLPYKRDGYSEAETMQLLSQTHLQSP 411
RP P S W +N+ Q + + DL Y Y T L SQ
Sbjct: 124 RPGPPSTTT-TSWPMTYNQDILQYAQLLTSNNEVDLSY----Y----TSTLFSQPFSTPS 174
Query: 412 ASSSLNKSSEMQRYEQFRRSGE 433
+SSS ++ ++ Q+ +Q ++ E
Sbjct: 175 SSSSSSQQTQQQQLQQQQQQRE 196
>TAIR|locus:2094897 [details] [associations]
symbol:AT3G16280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB023046
EMBL:AC001645 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
HOGENOM:HOG000237624 EMBL:AY995152 EMBL:AY560846 IPI:IPI00539623
RefSeq:NP_188249.3 UniGene:At.50189 ProteinModelPortal:Q9LU18
SMR:Q9LU18 EnsemblPlants:AT3G16280.1 GeneID:820874
KEGG:ath:AT3G16280 GeneFarm:2905 TAIR:At3g16280 eggNOG:NOG281093
InParanoid:Q9LU18 OMA:LPNIEEG ProtClustDB:CLSN2918820
Genevestigator:Q9LU18 Uniprot:Q9LU18
Length = 236
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 239 RRQSTGFPRGSSK----YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRA 294
RR S+ SS YRGV + G+W + + Q K ++LG F T AARA+D A
Sbjct: 44 RRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKKTRIWLGTFVTADMAARAHDVA 103
Query: 295 AVKCNGKDAVTNFDP--SLYQDELKASGHGV 323
A+ G AV NF SL+ +S H +
Sbjct: 104 ALTIKGSSAVLNFPELASLFPRPASSSPHDI 134
>TAIR|locus:2151591 [details] [associations]
symbol:ERF104 "ethylene response factor 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710 EMBL:AF360149
EMBL:AY054228 EMBL:AY142636 EMBL:AY088694 IPI:IPI00525572
RefSeq:NP_200968.1 UniGene:At.47568 ProteinModelPortal:Q9FKG1
SMR:Q9FKG1 DIP:DIP-48849N IntAct:Q9FKG1 STRING:Q9FKG1
EnsemblPlants:AT5G61600.1 GeneID:836281 KEGG:ath:AT5G61600
TAIR:At5g61600 eggNOG:NOG328203 InParanoid:Q9FKG1 OMA:EEERHYR
PhylomeDB:Q9FKG1 ProtClustDB:CLSN2916553 Genevestigator:Q9FKG1
Uniprot:Q9FKG1
Length = 241
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKK--YVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDP 309
YRGV G++ A + KK ++LG +DT VEA RAYD+AA + G+ A+ NF
Sbjct: 88 YRGVRRRPWGKYAAEIRD-PNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPL 146
Query: 310 SLYQDELKASGHGV 323
+ SG GV
Sbjct: 147 DVRVTSETCSGEGV 160
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 32/68 (47%), Positives = 37/68 (54%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKY-VYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDP 309
+YRGV GR+ A + GKK V+LG FDT EAARAYD AA G A TNF
Sbjct: 24 RYRGVRKRPWGRYAAEIRD-PGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPT 82
Query: 310 SLYQDELK 317
L + K
Sbjct: 83 FLELSDQK 90
>TAIR|locus:2195985 [details] [associations]
symbol:AT1G77200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 EMBL:AC004260 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY560875 EMBL:DQ446437 EMBL:DQ652938 IPI:IPI00531080
PIR:T00449 RefSeq:NP_177844.1 UniGene:At.50584
ProteinModelPortal:O80654 SMR:O80654 EnsemblPlants:AT1G77200.1
GeneID:844056 KEGG:ath:AT1G77200 TAIR:At1g77200 eggNOG:NOG297347
InParanoid:O80654 OMA:DENGISM PhylomeDB:O80654
ProtClustDB:CLSN2912844 Genevestigator:O80654 Uniprot:O80654
Length = 244
Score = 116 (45.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/94 (36%), Positives = 48/94 (51%)
Query: 223 LKQMSNLTKEEFVHVLRRQS--TGFP---RGSSKYRGVTLHKCGRWEARMGQFLGKKYVY 277
+KQ S + +EE H ++ S T R YRGV + G+W + + + K ++
Sbjct: 9 VKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSRIW 68
Query: 278 LGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSL 311
LG F T AARA+D AA+ G AV NF P L
Sbjct: 69 LGTFSTPEMAARAHDAAALTIKGTSAVLNF-PEL 101
Score = 37 (18.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 397 AETMQLLSQTHLQSPASSSLNKSSE 421
AET LS + + SSSL+ SSE
Sbjct: 147 AETQ--LSSSSYSTCTSSSLSPSSE 169
>TAIR|locus:2136078 [details] [associations]
symbol:CRF1 "AT4G11140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA;IDA] [GO:0048366 "leaf development" evidence=RCA;IMP]
[GO:0048825 "cotyledon development" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0048366 GO:GO:0048825 GO:GO:0042991 EMBL:AY560849
EMBL:AF080120 EMBL:AL049876 EMBL:BT025176 IPI:IPI00542737
PIR:T01919 RefSeq:NP_192852.1 UniGene:At.33584
ProteinModelPortal:O82503 SMR:O82503 IntAct:O82503 PRIDE:O82503
EnsemblPlants:AT4G11140.1 GeneID:826715 KEGG:ath:AT4G11140
TAIR:At4g11140 eggNOG:NOG254393 HOGENOM:HOG000237664
InParanoid:O82503 OMA:SSWHVED PhylomeDB:O82503
ProtClustDB:CLSN2685996 Genevestigator:O82503 Uniprot:O82503
Length = 287
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDP 309
K+RGV G+W A + + V+LG FDT EAA YD AA++ G +A NF P
Sbjct: 86 KFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPP 144
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 117 (46.2 bits), Expect = 0.00047, P = 0.00047
Identities = 30/70 (42%), Positives = 39/70 (55%)
Query: 243 TGFPRGSSK-YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGK 301
+G P +K YRGV G+W A + + ++LG FDT EAA AYD+AA K G
Sbjct: 142 SGVPSKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGD 201
Query: 302 DAVTNFDPSL 311
A NF P+L
Sbjct: 202 FARLNF-PNL 210
>TAIR|locus:2008021 [details] [associations]
symbol:ERF3 "ethylene responsive element binding factor
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009414 "response to water deprivation"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010105 EMBL:AC079279
HOGENOM:HOG000237624 EMBL:AB008105 EMBL:AC012561 EMBL:BT025295
EMBL:AK228091 IPI:IPI00534661 IPI:IPI00837459 PIR:T52011
RefSeq:NP_175479.1 UniGene:At.1645 UniGene:At.71718
ProteinModelPortal:O80339 SMR:O80339 IntAct:O80339 STRING:O80339
EnsemblPlants:AT1G50640.1 GeneID:841486 KEGG:ath:AT1G50640
TAIR:At1g50640 eggNOG:NOG251938 InParanoid:O80339 OMA:TKRYPRT
PhylomeDB:O80339 ProtClustDB:CLSN2682907 Genevestigator:O80339
GermOnline:AT1G50640 Uniprot:O80339
Length = 225
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 37/135 (27%), Positives = 59/135 (43%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPS 310
++RGV GR+ A + K V+LG FD+ EAARAYD AA G A TNF
Sbjct: 27 RFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPID 86
Query: 311 LYQDELKASGHGVDHNLDXXXXXXXXXXXXXXDFANRMQYTVMERPAPASLPNEVDWHNR 370
N + D ++ Q+ ++ RP +S+ + V+ +
Sbjct: 87 SSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTD--HQQQFPIVNRPTSSSMSSTVESFS- 143
Query: 371 GYRPKQQQEAYSRQH 385
G RP + A ++++
Sbjct: 144 GPRPTTMKPATTKRY 158
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 111 (44.1 bits), Expect = 0.00058, P = 0.00058
Identities = 29/57 (50%), Positives = 34/57 (59%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKKY-VYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+RGV GR+ A + GKK V+LG FDT EAARAYD AA + G A TNF
Sbjct: 33 FRGVRKRPWGRYAAEIRD-PGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 112 (44.5 bits), Expect = 0.00064, P = 0.00064
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKK--YVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
YRGV G++ A + KK V+LG FDT +EAAR YD+AA K G A+ NF
Sbjct: 72 YRGVRRRPWGKYAAEIRD-PNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNF 128
>TAIR|locus:2170101 [details] [associations]
symbol:ERF110 "ethylene response factor 110"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048510 "regulation of timing of transition from vegetative to
reproductive phase" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB026650
EMBL:AJ580378 IPI:IPI00543457 RefSeq:NP_199819.3 UniGene:At.29751
ProteinModelPortal:Q70II3 SMR:Q70II3 STRING:Q70II3
EnsemblPlants:AT5G50080.1 GeneID:835072 KEGG:ath:AT5G50080
TAIR:At5g50080 eggNOG:NOG295694 HOGENOM:HOG000210042
InParanoid:Q70II3 OMA:EDLINYW PhylomeDB:Q70II3
ProtClustDB:CLSN2920550 Genevestigator:Q70II3 Uniprot:Q70II3
Length = 220
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 251 KYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+YRGV G+W A + V+LG FDT AARAYD AA++ G A NF
Sbjct: 76 RYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 99 (39.9 bits), Expect = 0.00093, P = 0.00093
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 250 SKYRGVTLHKCGRW--EARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
+++RGV G++ E R G + ++LG F+T EAARAYDRAA G A+ NF
Sbjct: 18 ARFRGVRRRPWGKFAAEIRDPSRNGAR-LWLGTFETAEEAARAYDRAAFNLRGHLAILNF 76
Query: 308 DPSLY 312
P+ Y
Sbjct: 77 -PNEY 80
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 103 (41.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 24/56 (42%), Positives = 29/56 (51%)
Query: 252 YRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNF 307
YRGV G+W A + V+LG F+T AA AYD AA+K G A NF
Sbjct: 90 YRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145
Score = 48 (22.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 23/93 (24%), Positives = 37/93 (39%)
Query: 345 ANRMQYTVMERPA--PASLPNEVDWHNRGYRPKQQQEAYSRQHDLPY-KRDGYSEAETMQ 401
+N Y+ + P P S+PN +N+ Y + S Y GYS +
Sbjct: 153 SNSTYYSSNQIPQMEPQSIPN----YNQYYHDASSGDMLSFNLGGGYGSGTGYSMSHDNS 208
Query: 402 LLSQTHLQSPASSSLNKSSEMQRYEQFRRSGES 434
+ S + S ++ E Q Y +F R G+S
Sbjct: 209 TTTAATTSSSSGGS-SRQQEEQDYARFWRFGDS 240
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.130 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 520 461 0.00096 118 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 59
No. of states in DFA: 618 (66 KB)
Total size of DFA: 315 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.61u 0.12s 39.73t Elapsed: 00:00:02
Total cpu time: 39.62u 0.12s 39.74t Elapsed: 00:00:02
Start: Tue May 21 10:33:55 2013 End: Tue May 21 10:33:57 2013