Query 010006
Match_columns 520
No_of_seqs 295 out of 2220
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 17:48:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 3.6E-62 1.2E-66 520.5 46.2 448 73-520 4-451 (451)
2 3brk_X Glucose-1-phosphate ade 100.0 7.8E-51 2.7E-55 429.4 36.1 384 86-511 9-413 (420)
3 3st8_A Bifunctional protein GL 100.0 7.1E-45 2.4E-49 392.2 35.5 390 88-520 11-444 (501)
4 1hm9_A GLMU, UDP-N-acetylgluco 100.0 7.7E-44 2.6E-48 380.7 32.7 380 89-520 11-435 (468)
5 2ggo_A 401AA long hypothetical 100.0 1.5E-43 5E-48 371.1 27.1 355 90-520 1-389 (401)
6 4fce_A Bifunctional protein GL 100.0 7.7E-43 2.6E-47 371.8 28.2 379 88-520 7-430 (459)
7 2v0h_A Bifunctional protein GL 100.0 1.8E-41 6E-46 361.0 31.5 381 88-520 4-427 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 2.2E-34 7.4E-39 287.4 20.6 245 89-366 2-271 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 3.3E-32 1.1E-36 270.1 24.9 236 88-367 23-261 (269)
10 1tzf_A Glucose-1-phosphate cyt 100.0 1.3E-31 4.4E-36 263.6 21.0 246 89-369 2-254 (259)
11 2e3d_A UTP--glucose-1-phosphat 100.0 2.2E-31 7.7E-36 268.4 22.9 245 86-366 5-282 (302)
12 2ux8_A Glucose-1-phosphate uri 100.0 2.1E-31 7.3E-36 267.9 19.6 246 88-367 13-281 (297)
13 2pa4_A UTP-glucose-1-phosphate 100.0 1.1E-30 3.9E-35 265.8 22.4 249 88-367 11-284 (323)
14 3pnn_A Conserved domain protei 100.0 2.1E-30 7.2E-35 261.5 20.9 258 87-365 3-291 (303)
15 4evw_A Nucleoside-diphosphate- 100.0 3E-30 1E-34 254.0 19.4 227 92-363 2-245 (255)
16 1fxo_A Glucose-1-phosphate thy 100.0 1.9E-29 6.6E-34 253.2 24.5 233 89-364 2-240 (293)
17 1lvw_A Glucose-1-phosphate thy 100.0 4.2E-29 1.4E-33 250.9 24.2 233 89-364 3-241 (295)
18 1mc3_A Glucose-1-phosphate thy 100.0 2.7E-29 9.2E-34 252.4 19.9 233 89-364 3-241 (296)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 4.1E-29 1.4E-33 252.6 20.1 242 88-363 3-282 (308)
20 2x65_A Mannose-1-phosphate gua 100.0 5.7E-28 1.9E-32 247.0 17.4 235 90-359 2-270 (336)
21 2cu2_A Putative mannose-1-phos 99.9 3.3E-27 1.1E-31 241.4 16.5 235 89-362 2-268 (337)
22 1jyk_A LICC protein, CTP:phosp 99.9 1.7E-26 5.7E-31 227.1 14.4 219 89-364 25-251 (254)
23 3oam_A 3-deoxy-manno-octuloson 99.9 1.9E-25 6.4E-30 219.3 19.9 239 89-366 2-250 (252)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 1.2E-23 4.1E-28 206.7 22.6 237 88-362 8-255 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 1.8E-23 6.2E-28 206.3 20.7 237 88-363 17-263 (264)
26 4fcu_A 3-deoxy-manno-octuloson 99.9 1.2E-21 4.1E-26 192.1 23.2 237 90-365 2-250 (253)
27 2y6p_A 3-deoxy-manno-octuloson 99.9 4.4E-22 1.5E-26 192.4 19.6 225 89-363 2-231 (234)
28 1h7e_A 3-deoxy-manno-octuloson 99.9 4.9E-22 1.7E-26 193.6 19.5 227 89-364 2-238 (245)
29 2xme_A CTP-inositol-1-phosphat 99.9 1.8E-22 6.3E-27 195.2 11.6 214 87-362 16-231 (232)
30 1vic_A 3-deoxy-manno-octuloson 99.9 4.9E-21 1.7E-25 188.7 21.5 245 89-366 2-254 (262)
31 3f1c_A Putative 2-C-methyl-D-e 99.9 5.7E-21 1.9E-25 186.6 17.0 228 87-367 1-236 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 1.8E-20 6.1E-25 181.1 17.9 221 90-363 3-233 (236)
33 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 2.4E-21 8.3E-26 200.8 10.0 258 208-520 13-319 (374)
34 1vgw_A 4-diphosphocytidyl-2C-m 99.8 4.4E-19 1.5E-23 170.9 21.2 217 88-363 5-228 (231)
35 2yc3_A 2-C-methyl-D-erythritol 99.8 5.8E-20 2E-24 176.9 14.7 221 87-364 2-225 (228)
36 2xwl_A 2-C-methyl-D-erythritol 99.8 3.2E-19 1.1E-23 170.9 18.1 215 89-365 2-220 (223)
37 1ezi_A CMP-N-acetylneuraminic 99.8 8.7E-19 3E-23 168.8 18.8 217 88-364 3-224 (228)
38 2dpw_A Hypothetical protein TT 99.8 8E-20 2.7E-24 176.8 7.6 201 89-357 2-231 (232)
39 2icy_A Probable UTP-glucose-1- 99.8 7.2E-17 2.5E-21 170.2 27.2 340 88-477 78-469 (469)
40 1i52_A 4-diphosphocytidyl-2-C- 99.8 9.2E-18 3.2E-22 162.4 17.8 222 87-366 5-230 (236)
41 1qwj_A Cytidine monophospho-N- 99.7 2.6E-17 9E-22 158.7 14.6 216 88-365 2-222 (229)
42 1vpa_A 2-C-methyl-D-erythritol 99.7 2.7E-16 9.2E-21 151.7 20.3 213 88-364 12-228 (234)
43 2i5k_A UTP--glucose-1-phosphat 99.7 5.3E-16 1.8E-20 164.5 23.6 334 87-477 90-485 (488)
44 2wee_A MOBA-related protein; u 99.7 1.6E-16 5.3E-21 149.0 17.1 188 88-363 4-195 (197)
45 3q80_A 2-C-methyl-D-erythritol 99.7 5.9E-16 2E-20 149.5 21.2 217 89-363 7-229 (231)
46 2waw_A MOBA relate protein; un 99.7 1.9E-16 6.4E-21 148.5 16.9 188 88-363 4-195 (199)
47 3rsb_A Adenosylcobinamide-phos 99.7 4E-17 1.4E-21 153.2 11.0 129 90-242 1-136 (196)
48 2px7_A 2-C-methyl-D-erythritol 99.7 2.2E-16 7.6E-21 153.0 15.3 207 88-364 24-232 (236)
49 3d5n_A Q97W15_sulso; NESG, SSR 99.6 1.5E-15 5.1E-20 143.0 12.0 184 89-364 2-189 (197)
50 2e8b_A Probable molybdopterin- 99.6 7.8E-16 2.7E-20 145.5 8.9 179 87-362 12-197 (201)
51 1w55_A ISPD/ISPF bifunctional 99.6 1E-14 3.4E-19 150.2 12.6 199 87-360 1-202 (371)
52 1e5k_A Molybdopterin-guanine d 99.6 2.7E-14 9.3E-19 134.8 14.2 110 87-227 4-116 (201)
53 1jv1_A Glcnac1P uridyltransfer 99.5 3.6E-13 1.2E-17 143.4 20.2 212 88-315 101-344 (505)
54 4eqy_A Acyl-[acyl-carrier-prot 99.5 6.8E-14 2.3E-18 139.3 13.4 145 372-520 23-194 (283)
55 3hsq_A Acyl-[acyl-carrier-prot 99.5 9.3E-14 3.2E-18 136.5 14.2 142 371-520 6-172 (259)
56 4e79_A UDP-3-O-acylglucosamine 99.5 1.9E-13 6.4E-18 140.4 16.9 52 468-519 239-295 (357)
57 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 2.4E-13 8.4E-18 138.8 17.1 169 348-519 74-290 (341)
58 3r0s_A Acyl-[acyl-carrier-prot 99.5 1.1E-13 3.9E-18 136.4 13.8 142 371-520 10-177 (266)
59 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 3.3E-13 1.1E-17 139.2 17.1 60 460-519 247-312 (372)
60 1j2z_A Acyl-[acyl-carrier-prot 99.5 1.9E-13 6.5E-18 135.0 13.8 141 372-520 8-173 (270)
61 4e6u_A Acyl-[acyl-carrier-prot 99.5 2.1E-13 7E-18 134.4 13.8 140 373-520 15-179 (265)
62 1qre_A Carbonic anhydrase; bet 99.5 2.6E-13 9E-18 132.3 12.9 140 371-520 53-207 (247)
63 3ngw_A Molybdopterin-guanine d 99.5 1.4E-12 4.9E-17 123.7 17.3 114 90-236 1-116 (208)
64 3c8v_A Putative acetyltransfer 99.4 1.8E-14 6.3E-19 152.7 2.9 110 383-518 279-391 (496)
65 2oeg_A UTP-glucose-1-phosphate 99.4 1.5E-12 5.2E-17 137.9 17.1 209 88-315 74-323 (505)
66 2qia_A UDP-N-acetylglucosamine 99.4 8.2E-13 2.8E-17 129.8 13.8 137 375-520 15-177 (262)
67 3fs8_A QDTC; acetyltransferase 99.4 9.4E-13 3.2E-17 130.1 14.0 32 488-520 172-203 (273)
68 3tv0_A Dynactin subunit 6; LEF 99.4 4.7E-13 1.6E-17 125.6 10.7 130 376-519 11-146 (194)
69 3ixc_A Hexapeptide transferase 99.4 1.2E-12 4.1E-17 122.5 12.7 124 372-519 28-156 (191)
70 3r8y_A 2,3,4,5-tetrahydropyrid 99.4 7.4E-14 2.5E-18 135.6 4.0 27 335-364 38-68 (240)
71 3pmo_A UDP-3-O-[3-hydroxymyris 99.4 1.1E-12 3.7E-17 135.4 12.9 170 347-520 95-295 (372)
72 4e79_A UDP-3-O-acylglucosamine 99.4 1.7E-12 5.9E-17 133.2 14.1 170 346-520 78-278 (357)
73 3t57_A UDP-N-acetylglucosamine 99.4 2.3E-12 7.7E-17 129.6 13.7 63 458-520 133-201 (305)
74 1v3w_A Ferripyochelin binding 99.4 1.8E-12 6.1E-17 119.4 11.7 123 373-514 6-133 (173)
75 1xhd_A Putative acetyltransfer 99.4 2.8E-12 9.4E-17 118.0 12.0 122 374-514 9-135 (173)
76 3hsq_A Acyl-[acyl-carrier-prot 99.4 2.9E-12 9.8E-17 125.8 12.8 45 460-504 124-169 (259)
77 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 2.8E-12 9.5E-17 131.0 12.9 45 460-504 243-288 (341)
78 3mqg_A Lipopolysaccharides bio 99.4 2.2E-12 7.7E-17 120.6 11.1 61 459-520 59-135 (192)
79 3r0s_A Acyl-[acyl-carrier-prot 99.4 4.3E-12 1.5E-16 125.0 13.1 137 374-519 7-170 (266)
80 3r3r_A Ferripyochelin binding 99.4 5E-12 1.7E-16 117.7 12.7 130 372-519 10-144 (187)
81 3r1w_A Carbonic anhydrase; bet 99.3 5.2E-12 1.8E-16 117.6 12.7 129 373-519 15-148 (189)
82 3bfp_A Acetyltransferase; LEFT 99.3 1.1E-11 3.7E-16 116.3 14.9 85 398-504 86-173 (194)
83 4eqy_A Acyl-[acyl-carrier-prot 99.3 4.7E-12 1.6E-16 125.9 12.7 141 375-520 20-188 (283)
84 2qia_A UDP-N-acetylglucosamine 99.3 4.4E-12 1.5E-16 124.6 12.2 140 376-519 4-158 (262)
85 3tk8_A 2,3,4,5-tetrahydropyrid 99.3 1E-12 3.5E-17 132.1 7.1 171 325-519 74-275 (316)
86 1j2z_A Acyl-[acyl-carrier-prot 99.3 8E-12 2.7E-16 123.4 13.2 117 400-520 26-155 (270)
87 2yqc_A UDP-N-acetylglucosamine 99.3 1.9E-11 6.4E-16 129.7 16.7 212 89-315 103-352 (486)
88 3fs8_A QDTC; acetyltransferase 99.3 8.9E-12 3E-16 123.0 13.0 143 374-520 11-185 (273)
89 3t57_A UDP-N-acetylglucosamine 99.3 7.2E-12 2.5E-16 125.9 12.6 144 373-520 9-183 (305)
90 4e6u_A Acyl-[acyl-carrier-prot 99.3 1E-11 3.6E-16 122.2 13.4 119 398-520 30-173 (265)
91 3kwd_A Carbon dioxide concentr 99.3 1E-11 3.6E-16 118.1 12.6 128 379-520 41-178 (213)
92 3gos_A 2,3,4,5-tetrahydropyrid 99.3 4E-12 1.4E-16 125.8 9.5 103 400-520 117-235 (276)
93 3ixc_A Hexapeptide transferase 99.3 1.8E-11 6.1E-16 114.5 11.8 105 399-520 33-145 (191)
94 3oc9_A UDP-N-acetylglucosamine 99.3 1.7E-10 5.7E-15 118.8 19.9 209 88-313 34-275 (405)
95 1hm9_A GLMU, UDP-N-acetylgluco 99.3 1E-11 3.5E-16 131.9 11.1 98 398-504 324-432 (468)
96 3vbi_A ANTD, galactoside O-ace 99.3 1.8E-11 6.3E-16 115.6 11.4 33 399-431 52-86 (205)
97 2pig_A Putative transferase; S 99.3 2.5E-11 8.6E-16 122.8 12.9 125 373-502 60-195 (334)
98 4fce_A Bifunctional protein GL 99.3 8.7E-12 3E-16 132.0 9.9 134 373-518 276-438 (459)
99 1xhd_A Putative acetyltransfer 99.2 4.9E-11 1.7E-15 109.6 12.4 104 400-520 13-123 (173)
100 3r3r_A Ferripyochelin binding 99.2 6.4E-11 2.2E-15 110.1 12.1 104 400-520 16-133 (187)
101 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.2 1.5E-10 5.2E-15 119.5 15.9 130 374-519 127-300 (374)
102 3tv0_A Dynactin subunit 6; LEF 99.2 1E-10 3.6E-15 109.5 12.9 106 398-520 11-135 (194)
103 3eg4_A 2,3,4,5-tetrahydropyrid 99.2 3.8E-11 1.3E-15 120.2 10.4 66 416-485 171-237 (304)
104 3r1w_A Carbonic anhydrase; bet 99.2 8.8E-11 3E-15 109.3 12.0 104 400-520 20-137 (189)
105 3jqy_B NEUO, polysialic acid O 99.2 9.3E-11 3.2E-15 114.5 12.3 111 398-520 62-196 (252)
106 3vbi_A ANTD, galactoside O-ace 99.2 5.3E-11 1.8E-15 112.4 9.7 101 401-520 34-167 (205)
107 2pig_A Putative transferase; S 99.2 1.1E-10 3.7E-15 118.2 12.3 109 374-485 74-196 (334)
108 3mqg_A Lipopolysaccharides bio 99.1 2.3E-10 7.8E-15 106.8 12.2 107 374-504 6-132 (192)
109 1v3w_A Ferripyochelin binding 99.1 2.3E-10 7.8E-15 105.2 12.0 104 400-520 11-121 (173)
110 4ea9_A Perosamine N-acetyltran 99.1 2.4E-10 8.3E-15 109.1 12.5 29 399-431 111-139 (220)
111 2v0h_A Bifunctional protein GL 99.1 1.1E-10 3.7E-15 123.5 10.5 145 372-519 272-436 (456)
112 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 1.2E-10 4.2E-15 116.5 8.8 96 399-512 141-245 (304)
113 3r8y_A 2,3,4,5-tetrahydropyrid 99.1 2.9E-10 1E-14 110.1 11.3 70 398-485 102-182 (240)
114 3kwd_A Carbon dioxide concentr 99.1 3.3E-10 1.1E-14 107.6 11.4 105 400-520 40-161 (213)
115 2ggo_A 401AA long hypothetical 99.1 5.5E-10 1.9E-14 116.1 12.6 113 385-519 264-398 (401)
116 1qre_A Carbonic anhydrase; bet 99.1 6E-10 2.1E-14 108.4 11.1 104 401-520 61-190 (247)
117 3r5d_A Tetrahydrodipicolinate 99.0 1.7E-10 5.9E-15 114.5 6.6 88 400-514 197-293 (347)
118 3fsy_A Tetrahydrodipicolinate 99.0 3.2E-10 1.1E-14 111.7 7.3 51 449-504 208-267 (332)
119 3gos_A 2,3,4,5-tetrahydropyrid 99.0 8.7E-10 3E-14 109.0 10.3 61 459-520 141-210 (276)
120 3tk8_A 2,3,4,5-tetrahydropyrid 99.0 1.2E-09 4.1E-14 109.7 10.9 85 401-489 170-257 (316)
121 2wlg_A Polysialic acid O-acety 99.0 1.5E-09 5.1E-14 103.3 9.5 27 400-426 59-90 (215)
122 3c8v_A Putative acetyltransfer 99.0 1.1E-09 3.6E-14 116.3 9.1 94 372-484 280-380 (496)
123 3r5d_A Tetrahydrodipicolinate 98.9 3.8E-09 1.3E-13 104.9 10.1 48 469-519 231-286 (347)
124 3jqy_B NEUO, polysialic acid O 98.9 2.6E-09 9E-14 104.1 8.9 34 398-431 84-121 (252)
125 4ea9_A Perosamine N-acetyltran 98.9 6E-09 2.1E-13 99.3 10.3 29 399-431 117-145 (220)
126 3nz2_A Hexapeptide-repeat cont 98.9 2E-09 6.9E-14 100.8 6.8 37 398-434 75-115 (195)
127 2rij_A Putative 2,3,4,5-tetrah 98.9 8.5E-09 2.9E-13 105.2 11.5 139 344-514 169-327 (387)
128 3fsy_A Tetrahydrodipicolinate 98.9 6.4E-09 2.2E-13 102.5 9.6 34 448-485 233-266 (332)
129 3bfp_A Acetyltransferase; LEFT 98.8 1.1E-08 3.9E-13 95.6 10.3 59 460-519 116-175 (194)
130 4hur_A Virginiamycin A acetylt 98.8 2.5E-09 8.5E-14 102.2 5.2 18 468-485 119-136 (220)
131 3st8_A Bifunctional protein GL 98.8 1.9E-08 6.4E-13 107.8 12.2 103 399-511 334-447 (501)
132 3ftt_A Putative acetyltransfer 98.8 1.1E-08 3.6E-13 96.2 9.0 49 384-434 61-113 (199)
133 3hjj_A Maltose O-acetyltransfe 98.8 1.7E-08 5.7E-13 94.1 10.2 49 383-434 64-117 (190)
134 1krr_A Galactoside O-acetyltra 98.8 1.3E-08 4.5E-13 95.8 8.8 50 382-433 60-113 (203)
135 3srt_A Maltose O-acetyltransfe 98.8 1.2E-08 4.2E-13 94.9 8.3 50 382-433 61-114 (188)
136 3q1x_A Serine acetyltransferas 98.8 1.2E-08 4E-13 102.1 8.3 59 415-486 183-241 (313)
137 2wlg_A Polysialic acid O-acety 98.7 2.6E-08 9E-13 94.6 9.7 18 468-485 100-117 (215)
138 3nz2_A Hexapeptide-repeat cont 98.7 3.3E-08 1.1E-12 92.5 9.4 8 459-466 104-111 (195)
139 3hjj_A Maltose O-acetyltransfe 98.7 4.3E-08 1.5E-12 91.3 9.7 18 415-432 78-95 (190)
140 3q1x_A Serine acetyltransferas 98.7 1.8E-08 6.1E-13 100.7 6.9 84 399-485 169-258 (313)
141 3brk_X Glucose-1-phosphate ade 98.7 4E-08 1.4E-12 102.8 9.7 66 400-485 303-374 (420)
142 1yp2_A Glucose-1-phosphate ade 98.7 2.9E-08 1E-12 104.8 8.6 100 398-518 313-436 (451)
143 3mc4_A WW/RSP5/WWP domain:bact 98.7 9.8E-08 3.4E-12 94.0 11.1 80 400-485 171-251 (287)
144 4hur_A Virginiamycin A acetylt 98.7 2E-08 6.7E-13 95.9 5.9 11 398-408 34-44 (220)
145 1ocx_A Maltose O-acetyltransfe 98.6 5.1E-08 1.8E-12 90.2 7.2 36 398-433 71-110 (182)
146 2p2o_A Maltose transacetylase; 98.6 7E-08 2.4E-12 89.5 8.1 36 398-433 73-112 (185)
147 1ssq_A SAT, serine acetyltrans 98.6 8.9E-08 3E-12 93.6 9.2 80 400-485 144-224 (267)
148 3mc4_A WW/RSP5/WWP domain:bact 98.6 5.7E-08 1.9E-12 95.7 7.7 68 398-487 163-235 (287)
149 1krr_A Galactoside O-acetyltra 98.6 2.8E-07 9.4E-12 86.7 12.1 16 449-467 96-111 (203)
150 3ftt_A Putative acetyltransfer 98.6 1.9E-07 6.5E-12 87.6 10.4 17 415-431 74-90 (199)
151 2p2o_A Maltose transacetylase; 98.5 1.2E-07 4E-12 88.0 7.7 84 402-504 57-160 (185)
152 3f1x_A Serine acetyltransferas 98.5 1E-07 3.4E-12 95.1 7.6 87 400-504 191-281 (310)
153 3srt_A Maltose O-acetyltransfe 98.5 3.9E-07 1.3E-11 84.6 10.9 49 402-466 59-111 (188)
154 3r3i_A UTP--glucose-1-phosphat 98.5 4.6E-06 1.6E-10 88.0 20.2 353 86-477 124-525 (528)
155 1ocx_A Maltose O-acetyltransfe 98.5 3.7E-07 1.3E-11 84.4 10.2 8 459-466 100-107 (182)
156 3f1x_A Serine acetyltransferas 98.5 2E-07 6.7E-12 93.0 8.7 83 400-485 197-286 (310)
157 1t3d_A SAT, serine acetyltrans 98.5 4.7E-07 1.6E-11 89.3 11.1 79 400-484 164-243 (289)
158 2rij_A Putative 2,3,4,5-tetrah 98.5 8.5E-08 2.9E-12 97.9 5.0 64 417-485 260-323 (387)
159 1ssq_A SAT, serine acetyltrans 98.5 2.9E-07 9.8E-12 90.0 8.4 28 205-232 19-48 (267)
160 3eev_A Chloramphenicol acetylt 98.4 2.2E-07 7.4E-12 88.1 6.1 38 398-435 23-72 (212)
161 1t3d_A SAT, serine acetyltrans 98.4 5.2E-07 1.8E-11 89.0 8.3 79 398-504 156-239 (289)
162 3eev_A Chloramphenicol acetylt 98.3 5.8E-07 2E-11 85.1 5.6 16 415-430 58-73 (212)
163 3gue_A UTP-glucose-1-phosphate 98.2 0.00082 2.8E-08 70.4 28.7 260 88-364 75-389 (484)
164 4e8l_A Virginiamycin A acetylt 98.2 9.3E-07 3.2E-11 84.1 5.1 101 398-504 33-148 (219)
165 1xat_A Xenobiotic acetyltransf 98.1 1.2E-06 4E-11 83.0 4.2 17 414-430 55-71 (212)
166 4e8l_A Virginiamycin A acetylt 98.1 3E-06 1E-10 80.5 7.0 27 405-431 53-81 (219)
167 1mr7_A Streptogramin A acetylt 98.1 1.1E-06 3.7E-11 83.1 3.6 31 468-504 113-143 (209)
168 1mr7_A Streptogramin A acetylt 98.0 5.2E-06 1.8E-10 78.3 6.5 46 458-505 114-160 (209)
169 1xat_A Xenobiotic acetyltransf 97.9 3.2E-05 1.1E-09 73.0 9.8 39 398-436 21-71 (212)
170 3ogz_A UDP-sugar pyrophosphory 97.3 0.0059 2E-07 65.6 16.6 216 88-315 113-375 (630)
171 2i5e_A Hypothetical protein MM 96.4 0.0073 2.5E-07 56.4 8.0 105 88-226 2-111 (211)
172 3cgx_A Putative nucleotide-dip 87.6 2.2 7.4E-05 40.5 9.2 89 121-229 37-129 (242)
173 3bcv_A Putative glycosyltransf 86.4 5.6 0.00019 36.4 11.4 98 122-237 18-118 (240)
174 1qg8_A Protein (spore coat pol 81.1 25 0.00086 32.2 13.6 102 115-231 7-116 (255)
175 1xhb_A Polypeptide N-acetylgal 65.6 78 0.0027 32.2 13.9 97 122-234 43-145 (472)
176 2z86_A Chondroitin synthase; G 52.8 86 0.0029 33.2 11.8 96 122-234 106-205 (625)
177 4fix_A UDP-galactofuranosyl tr 51.8 71 0.0024 34.6 10.9 101 116-234 187-299 (657)
178 2ffu_A Ppgalnact-2, polypeptid 51.5 97 0.0033 31.9 11.7 91 123-234 81-177 (501)
179 2z86_A Chondroitin synthase; G 51.5 93 0.0032 33.0 11.8 99 115-231 381-482 (625)
180 2d7i_A Polypeptide N-acetylgal 49.5 1E+02 0.0035 32.5 11.6 94 122-232 126-225 (570)
181 3ckj_A Putative uncharacterize 46.8 95 0.0032 30.0 10.1 101 122-238 61-168 (329)
182 3f1y_A Mannosyl-3-phosphoglyce 35.4 1.2E+02 0.0042 30.2 9.0 51 187-240 165-218 (387)
183 2xvy_A Chelatase, putative; me 26.4 74 0.0025 29.9 5.2 22 122-143 65-86 (269)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=3.6e-62 Score=520.55 Aligned_cols=448 Identities=95% Similarity=1.445 Sum_probs=366.5
Q ss_pred cCCCCCCCCCCcccccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHH
Q 010006 73 SDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNR 152 (520)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~ 152 (520)
++++...++.++..|++|+|||||||.||||+|||..+||+|+|++|++|||+|++++|.++|+++|+|+++++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~avILAaG~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~ 83 (451)
T 1yp2_A 4 SDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNR 83 (451)
T ss_dssp ------CCCCSSCHHHHEEEEEC------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCCHHHHH
T ss_pred ccccccceecCcccccceEEEEECCCCCCcccchhcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCHHHHHH
Confidence 34455566777777888999999999999999999999999999998669999999999999999999999999999999
Q ss_pred HHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccccHHHHHHHHHhcC
Q 010006 153 HLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETD 232 (520)
Q Consensus 153 ~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~ 232 (520)
|+.+.+...++..+....++++...+.+.+++|..|++++|+.++.+++....++||+++||++++.++.++++.|++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~ 163 (451)
T 1yp2_A 84 HLSRAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETD 163 (451)
T ss_dssp HHHHHCC--------CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTT
T ss_pred HHhhhhhcccccccccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcC
Confidence 99864310111000223356665555555677889999999999988864335799999999999999999999999989
Q ss_pred CcEEEEEEecCcccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHH
Q 010006 233 ADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNL 312 (520)
Q Consensus 233 a~~tl~~~~~~~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~l 312 (520)
+++|+++.+...+++..||++.+|++++|..|.|||.......+.++.++++..+......++++++|+|+|++++|.++
T Consensus 164 ~~~tl~~~~~~~~~~~~~g~v~~d~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~ 243 (451)
T 1yp2_A 164 ADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNL 243 (451)
T ss_dssp CSEEEEEEEECHHHHTTSEEEEECTTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHH
T ss_pred CcEEEEEEEcChhhcccCCEEEECCCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHH
Confidence 99999888875445678999999988999999999997766667777777765544333456799999999999998778
Q ss_pred HhhhCCCCCCccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCcee
Q 010006 313 LRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKM 392 (520)
Q Consensus 313 l~~~~~~~~~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i 392 (520)
+++.++...+|.+++|+.+++++.+++++.++++|.||+|+++|+++++.++....+...++++.+++++.+.+.|++.+
T Consensus 244 l~~~~~~~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~~~~~~~~~~~i~~~~~i~~~~~i 323 (451)
T 1yp2_A 244 LRDKFPGANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSAPIYTQPRYLPPSKM 323 (451)
T ss_dssp HHTTCTTCCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSCSSCSCCSSSCCCCCCCCCCCEEE
T ss_pred HHhhcccccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhcccccchhccCCCCeeccCCccCCCeEE
Confidence 77655556678889999999867899999999999999999999999999887654556889999999999999999999
Q ss_pred ecccccceEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEEC
Q 010006 393 LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIID 472 (520)
Q Consensus 393 ~~~~i~~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~ 472 (520)
.++.|.+++||++|+|+++.|.+++||++|.||++|+|.++++++++++++........-.|.+.+.||+++.|.+++||
T Consensus 324 ~~~~I~~~~Ig~~~~I~~~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig 403 (451)
T 1yp2_A 324 LDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIID 403 (451)
T ss_dssp EEEEEEEEEECTTCEEEEEEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEEC
T ss_pred cceEEeCeEECCCCEEcceEEeccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeC
Confidence 88888899999999999888889999999999999999999999987776543322222222222589999999999999
Q ss_pred CCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 473 KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
++|.||+|++|.+++++.++.++|++++|+++.|+||++++||+||+|
T Consensus 404 ~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 404 KNARIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp TTCEECTTCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CCcEECCCCEEeCCcccccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 999999999999999998888999999999998899999999999987
No 2
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.8e-51 Score=429.35 Aligned_cols=384 Identities=33% Similarity=0.592 Sum_probs=301.3
Q ss_pred cccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCC
Q 010006 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (520)
Q Consensus 86 ~~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (520)
+|++|+|||||||.|+||+|||..+||+|+|++|++|||+|++++|.++|+++|+|+++++.+++.+|+.+.+. +...
T Consensus 9 mm~~~~avILAaG~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~--~~~~ 86 (420)
T 3brk_X 9 LARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWD--FFRP 86 (420)
T ss_dssp GGGGEEEEEEECCCCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHSC--CCCG
T ss_pred hhhceEEEEEcCCCCCccchhhcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCChHHHHHHHhhhhc--cccc
Confidence 46679999999999999999999999999999986589999999999999999999999988999999987532 1110
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
+....+.++...+...++.|..|++++++.++.+++....++|++++||++++.++.++++.|++.++++++++.+.+.+
T Consensus 87 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 166 (420)
T 3brk_X 87 ERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRM 166 (420)
T ss_dssp GGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETT
T ss_pred cccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcc
Confidence 11123555543332114567899999999999888643347899999999988899999999999889999988876545
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC---CCC
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---AND 322 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~~ 322 (520)
++..|+++.+|++++|..|.|||....... .....+++++|+|+|++++|.+++++..+. ..+
T Consensus 167 ~~~~~g~v~~d~~g~v~~~~ekp~~~~~~~--------------~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 232 (420)
T 3brk_X 167 EATGFGVMHVNEKDEIIDFIEKPADPPGIP--------------GNEGFALASMGIYVFHTKFLMEAVRRDAADPTSSRD 232 (420)
T ss_dssp GGGGSEEEEECTTSBEEEEEESCSSCCCBT--------------TBTTEEEEEEEEEEEEHHHHHHHHTSSCCC------
T ss_pred ccCcccEEEECCCCcEEEeEeCCCcccccc--------------ccccceEEeeeeEEEeHHHHHHHHHHhcccCCcccc
Confidence 577899999998899999999986432100 001246899999999999987677643331 235
Q ss_pred ccccchHhhhhCCceEEEEEe-----------cceEEeCCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCce
Q 010006 323 FGSEVIPGATSIGMRVQAYLY-----------DGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSK 391 (520)
Q Consensus 323 ~~~dil~~li~~~~~v~a~~~-----------~g~w~dI~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 391 (520)
|..|+++.+++++ +++++.+ +++|.||||+++|+++++.++... +...++.+..++++.+.+.|++.
T Consensus 233 ~~~d~l~~li~~g-~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~-~~~~~~~~~~~i~~~~~i~~~~~ 310 (420)
T 3brk_X 233 FGKDIIPYIVEHG-KAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVV-PDLDIYDKSWPIWTYAEITPPAK 310 (420)
T ss_dssp ----CTTHHHHHS-CEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSS-CSSCTTCCSSCCCCCCCCCCCCE
T ss_pred chHHHHHHHhhhC-cEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCC-chhhcCCCCCceeeccccCCCcE
Confidence 6689999998855 9999999 889999999999999999988765 44567778888999999999999
Q ss_pred ee------cccccceEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCE
Q 010006 392 ML------DADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSH 465 (520)
Q Consensus 392 i~------~~~i~~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ 465 (520)
+. ++.+.++.||++|+|.++.|.+|+||++|.||++|.|++++++++ +.||+++.
T Consensus 311 i~~~~~~~~~~i~~~~ig~~~~I~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~-------------------~~i~~~~~ 371 (420)
T 3brk_X 311 FVHDDEDRRGSAVSSVVSGDCIISGAALNRSLLFTGVRANSYSRLENAVVLPS-------------------VKIGRHAQ 371 (420)
T ss_dssp EECBCSSCBCEEESCEECSSCEEESCEEESCEECTTCEECTTCEEEEEEECTT-------------------CEECTTCE
T ss_pred EecccccCCcEecCCEECCCCEEcCCEEeCcEEcCCCEECCCCEEcceEEcCC-------------------CEECCCCE
Confidence 86 356689999999999448999999999999999999999888776 58999999
Q ss_pred EcceEECCCCEECCCcEEecCCCcCCcccccCCeEE-ccCeEEEcCC
Q 010006 466 IKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFI-KSGIVTIIKD 511 (520)
Q Consensus 466 i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I-~~~~v~Ig~~ 511 (520)
|.+|+||+++.||++++|.+... ...++.+| ..|+|+|.++
T Consensus 372 i~~~~ig~~~~i~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~ 413 (420)
T 3brk_X 372 LSNVVIDHGVVIPEGLIVGEDPE-----LDAKRFRRTESGICLITQS 413 (420)
T ss_dssp EEEEEECTTCEECTTCEESSCHH-----HHHHHSEECTTSCEEECHH
T ss_pred EeceEECCCCEECCCCEEeCCCC-----CCCceEEEecCceEEEecc
Confidence 99999999999999999974211 12224666 5665566554
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=7.1e-45 Score=392.21 Aligned_cols=390 Identities=17% Similarity=0.191 Sum_probs=283.8
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhh-hccCCCCc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYK 166 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~-~~~~~~~~ 166 (520)
..+.+||||||+||||+|+| ||||+||+|+ |||+|+|++|.++|+++|+|+++|+.+++++|+.+.. .++.
T Consensus 11 ~~~~vvILAaG~GtRm~~~~---pK~l~pv~gk-p~i~~~l~~~~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~---- 82 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDT---PKVLHTLAGR-SMLSHVLHAIAKLAPQRLIVVLGHDHQRIAPLVGELADTLGR---- 82 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSS---CGGGCEETTE-EHHHHHHHHHHHHCCSEEEEEECTTHHHHHHHHHHHHHHHTS----
T ss_pred CCceEEEECCcCcccCCCCC---CHHHeEECCh-hHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHHHHhcCC----
Confidence 45899999999999999975 9999999987 9999999999999999999999999999999998732 2221
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCc
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDE 244 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~ 244 (520)
. ++++ .| ++++||++||+++++++.+...+++|+++||. +++ ..+.+|++.|++.++++++++.+.+
T Consensus 83 --~-i~~~--~q-----~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~- 151 (501)
T 3st8_A 83 --T-IDVA--LQ-----DRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD- 151 (501)
T ss_dssp --C-CEEE--EC-----SSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS-
T ss_pred --c-EEEE--Ec-----CCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC-
Confidence 1 2222 22 23499999999999998765567899999998 555 4599999999999999999998865
Q ss_pred ccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC---CC
Q 010006 245 KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---AN 321 (520)
Q Consensus 245 ~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~ 321 (520)
++..||.+..|++|+|+.|.|||....... ...++++|+|+|++++|.+++.....+ ..
T Consensus 152 -dp~~yG~i~~~~~g~v~~ivEk~~~~~~~~-----------------~i~~in~Giy~f~~~~l~~~l~~l~~~n~~~e 213 (501)
T 3st8_A 152 -DPFGYGRILRTQDHEVMAIVEQTDATPSQR-----------------EIREVNAGVYAFDIAALRSALSRLSSNNAQQE 213 (501)
T ss_dssp -CCTTSCEEEECTTCCEEEEECGGGCCHHHH-----------------HCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCS
T ss_pred -CchhccccccccceeEEeeccccCCChhhc-----------------cceeeeceeeeecchhHHHhhhhhcccccccc
Confidence 588999999999999999999987543211 135899999999999999887653332 23
Q ss_pred CccccchHhhhhCCceEEEEEecceEEeCC--CHHHHHHhhhhc---------ccC---CCCCCccccCCCccccCCCcC
Q 010006 322 DFGSEVIPGATSIGMRVQAYLYDGYWEDIG--TIEAFYNANLGI---------TKK---PIPDFSFYDRSAPIYTQPRYL 387 (520)
Q Consensus 322 ~~~~dil~~li~~~~~v~a~~~~g~w~dI~--t~~dy~~An~~~---------l~~---~~~~~~~~~~~~~i~~~~~~~ 387 (520)
.+..+++..+...+..+.++..+..|...+ +...+.++...+ ... ..|...+++++..+...+.+.
T Consensus 214 ~yltd~i~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~ 293 (501)
T 3st8_A 214 LYLTDVIAILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIH 293 (501)
T ss_dssp CCTTHHHHHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEEC
T ss_pred cchhhHHHHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceec
Confidence 455788888888899999999987766544 444444332211 111 112234455566666666676
Q ss_pred CCceeec-ccc-cceEECCCcEEe-----------eeEEeeeEECCCCEECCCCEEcccEEECC-----ccccccccccc
Q 010006 388 PPSKMLD-ADV-TDSVIGEGCVIK-----------NCKIHHSVVGLRSCISEGAIIEDTLLMGA-----DYYETDADRRF 449 (520)
Q Consensus 388 ~~~~i~~-~~i-~~~~Ig~g~~I~-----------~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~-----~~~~~~~~~~~ 449 (520)
|++.+.+ +.+ .+++|+++|.+. .+.+..+.+|.++.|+++++|.+.++++. .++|. +++
T Consensus 294 ~~v~i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~i---k~s 370 (501)
T 3st8_A 294 PGTQLLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEV---KNS 370 (501)
T ss_dssp SSEEEETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEE---ESC
T ss_pred ceeeecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEE---ccc
Confidence 6666652 111 223333333322 22223344555555555555544433332 12222 677
Q ss_pred cccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCc-ccccCCeEEccC-----eEEEcCCCEeCCCccC
Q 010006 450 LAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEA-ARETDGYFIKSG-----IVTIIKDALIPSGTII 520 (520)
Q Consensus 450 ~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~-~~~~~~~~I~~~-----~v~Ig~~~~i~~gtvi 520 (520)
.+|+|+ .|++.+++.+++||+||.||+++++.|++++... +.+|++|+|+++ .|+||++|+|++||+|
T Consensus 371 ~Ig~gs---kI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v 444 (501)
T 3st8_A 371 TIGTGT---KVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVV 444 (501)
T ss_dssp EECTTC---EEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred eecCCc---EEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEE
Confidence 888888 8999999999999999999999999999998876 678999999876 2889999999999986
No 4
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=7.7e-44 Score=380.67 Aligned_cols=380 Identities=17% Similarity=0.198 Sum_probs=259.7
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
.-+|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.+.
T Consensus 11 ~~~~vIlAaG~g~R~~~---~~pK~l~~i~gk-pli~~~l~~l~~~g~~~iivv~~~~~~~i~~~~~~~----------- 75 (468)
T 1hm9_A 11 SNFAIILAAGKGTRMKS---DLPKVLHKVAGI-SMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQ----------- 75 (468)
T ss_dssp CEEEEEECCCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHTTCCSEEEEEECTTHHHHHHSSSSS-----------
T ss_pred CCcEEEEcCCCCccCCC---CCCcEeeEECCc-cHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHhCCC-----------
Confidence 45899999999999984 689999999987 999999999999999999999998887776665430
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce--eccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
+.++. + .+..|++++++.++.+++. ..++||+++||+ +...++.++++.|++.++++++++.+.. +
T Consensus 76 --i~~v~--~-----~~~~G~~~sl~~a~~~~~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~--~ 143 (468)
T 1hm9_A 76 --TEFVT--Q-----SEQLGTGHAVMMTEPILEG-LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD--N 143 (468)
T ss_dssp --SEEEE--C-----SSCCCHHHHHHTTHHHHTT-CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS--C
T ss_pred --cEEEe--C-----CccCChHHHHHHHHHHhcc-CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC--C
Confidence 22322 1 1248999999999988852 247899999999 4457799999999988888888887754 3
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC---CCCc
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---ANDF 323 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~~~ 323 (520)
+..|+.+..|++++|..|.|||...... ...++.++|+|+|+++.|.+++++.... ...+
T Consensus 144 ~~~~g~v~~d~~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~ 206 (468)
T 1hm9_A 144 PFGYGRIVRNDNAEVLRIVEQKDATDFE-----------------KQIKEINTGTYVFDNERLFEALKNINTNNAQGEYY 206 (468)
T ss_dssp CTTSCEEEECTTCCEEEEECTTTCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCC
T ss_pred CCceeEEEECCCCCEEEEEECCCCChHH-----------------hcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEE
Confidence 5679999999889999999987522100 1246899999999999776676643332 2234
Q ss_pred cccchHhhhhCCceEEEEEecceEEe--CCCHHHHHHhhhhcccC------------CCCCCccccCCCccccCCCcCCC
Q 010006 324 GSEVIPGATSIGMRVQAYLYDGYWED--IGTIEAFYNANLGITKK------------PIPDFSFYDRSAPIYTQPRYLPP 389 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~g~w~d--I~t~~dy~~An~~~l~~------------~~~~~~~~~~~~~i~~~~~~~~~ 389 (520)
..|+++.+++.+.+++++.++++|.+ |+|++||..++..+..+ ..|...++++.+.|...+.+.|+
T Consensus 207 ~~d~~~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~i~~~ 286 (468)
T 1hm9_A 207 ITDVIGIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEAN 286 (468)
T ss_dssp TTHHHHHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGCEECTTCEECTTCEECSS
T ss_pred HHHHHHHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEECCCeeEECCCcEECCCCEECCC
Confidence 58999999887889999999999977 55999999998654321 01212234444455545555554
Q ss_pred ceeecccccceEECCCcEEee-eEEe----------------eeEECCCCEECCCCEEcccEEEC-Ccccccccc-cccc
Q 010006 390 SKMLDADVTDSVIGEGCVIKN-CKIH----------------HSVVGLRSCISEGAIIEDTLLMG-ADYYETDAD-RRFL 450 (520)
Q Consensus 390 ~~i~~~~i~~~~Ig~g~~I~~-~~i~----------------~s~Ig~~~~Ig~~~~I~~~~i~~-~~~~~~~~~-~~~~ 450 (520)
+.+. .++.||++|+|+. |.|. ++.||++|.||++|.|.+.++++ +......++ .++.
T Consensus 287 ~~i~----~~~~ig~~~~I~~~~~i~~~~ig~~~~i~~~~i~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~ 362 (468)
T 1hm9_A 287 VILK----GQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSS 362 (468)
T ss_dssp CEEE----SSCEECTTCEECTTCEEESCEECTTCEECSCEEESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCE
T ss_pred cEEC----CCCEECCCCEECCCCEEeccEEeCCcEEEEEEEeccccCCCcEECCceEEecCcEECCccEECCCcEEeeeE
Confidence 4443 2344444444444 4444 44555555555555555222222 211111111 2333
Q ss_pred ccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCc-------CCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 451 AAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSV-------QEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 451 ~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v-------~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+|+++ .|++.+.+.+++||+||.||.++++.+.+++ ++.+++|.++.|..+ ++||++++|++|++|
T Consensus 363 Ig~~~---~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~-v~Ig~~~~i~~~s~v 435 (468)
T 1hm9_A 363 IGENT---KAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAP-VELGDNSLVGAGSTI 435 (468)
T ss_dssp ECTTC---EEEEEEEEESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESS-CEECTTCEECTTCEE
T ss_pred EcCCc---EeCCceEEccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCC-cEECCCCEECCCCEE
Confidence 34443 3444444556789999999999999874444 444445555555555 778999999998874
No 5
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=1.5e-43 Score=371.15 Aligned_cols=355 Identities=19% Similarity=0.295 Sum_probs=262.1
Q ss_pred eEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCCC
Q 010006 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (520)
|+|||||||.|+||+|||..+||+|+|++|+ |||+|++++|.++|+++|+|+++++ +.+++.+.+.
T Consensus 1 m~aiIlA~G~g~R~~plt~~~~K~ll~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~---i~~~~~~~~~---------- 66 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPITHTRPKAFVPILSK-PLIEYQIEYLRKCGIRDITVIVSSK---NKEYFEKKLK---------- 66 (401)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGG---GHHHHHHHCT----------
T ss_pred CeEEEEcCcCccccCcccCCCCcceeeECCE-eHHHHHHHHHHHCCCCEEEEEeCHH---HHHHhhccCC----------
Confidence 6899999999999999999999999999987 9999999999999999999999876 6677765321
Q ss_pred eEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecc--ccHHHHHHHHHhcCCcEEEEEEecCcccC
Q 010006 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR--MDYERFIQAHRETDADITVAALPMDEKRA 247 (520)
Q Consensus 170 ~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~--~dl~~ll~~h~~~~a~~tl~~~~~~~~~~ 247 (520)
.+.++.. +.|..|++++++.++. .++|++++||+++. .++.++++ .+++++++.+.+ ++
T Consensus 67 ~i~~~~~------~~~~~g~~~~l~~~~~------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~--~~ 127 (401)
T 2ggo_A 67 EISIVTQ------KDDIKGTGAAILSAKF------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS--NP 127 (401)
T ss_dssp TCEEEEC------CTTCCBSTTTGGGCCC------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS--CC
T ss_pred cEEEEeC------CCCCCChHHHHHHhcc------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC--CC
Confidence 1233321 1134788888876642 37899999999776 56777776 356778877754 35
Q ss_pred cceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCCc-cc
Q 010006 248 TAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-ANDF-GS 325 (520)
Q Consensus 248 ~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~~-~~ 325 (520)
..|+.+..++++++..|.|||..+. ++++++|+|+|++++|. .+++..+. ..++ ..
T Consensus 128 ~~~~~v~~~~~g~v~~~~ek~~~~~---------------------~~~~~~Giy~~~~~~~~-~l~~~~~~~~~~~~~~ 185 (401)
T 2ggo_A 128 KDYGVLVLDNQNNLSKIIEKPEIPP---------------------SNLINAGIYKLNSDIFT-YLDKISISERGELELT 185 (401)
T ss_dssp SSSCEEEECTTSSEEEEECSCSSCS---------------------CSEEEEEEEEEETHHHH-HHHHSCCCSSSCBCHH
T ss_pred cceeEEEECCCCeEEEEEECCCCCC---------------------CcEEEEEEEEEcHHHHH-HhhhcCcCCCCceEHH
Confidence 5788888888899999999885432 35899999999999986 45543321 1222 36
Q ss_pred cchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCCC-CC-CccccCCCccccCCCcCCCceee-cccc-cceE
Q 010006 326 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPI-PD-FSFYDRSAPIYTQPRYLPPSKML-DADV-TDSV 401 (520)
Q Consensus 326 dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~~-~~-~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~ 401 (520)
++++.+ +.+.+++++..+++|.||+|++||..++..++.+.. +. ...+.+.+.+...+.+.+++.+. ++.| .++.
T Consensus 186 ~~~~~~-~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~ 264 (401)
T 2ggo_A 186 DAINLM-AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVY 264 (401)
T ss_dssp HHHHHH-HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEE
T ss_pred HHHHHH-HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeE
Confidence 778877 546799999999999999999999999988765432 10 12233444444444444444442 3333 4577
Q ss_pred ECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCCCEECC
Q 010006 402 IGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGD 479 (520)
Q Consensus 402 Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~ 479 (520)
||++|.|+. |.|. +++||++|.||++|.|.+++++++ +.|++++.|.+++||+++.||+
T Consensus 265 Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~-------------------~~i~~~~~i~~~~Ig~~~~Ig~ 325 (401)
T 2ggo_A 265 IGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEG-------------------SKIPHLSYVGDSVIAEDVNFGA 325 (401)
T ss_dssp ECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTT-------------------CEEEESCEEESCEECTTCEECT
T ss_pred ECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCC-------------------cEECCCceEcceEECCCcEECC
Confidence 788888876 7776 677777777777777766666554 4799999999999999999999
Q ss_pred CcEEec------------------------CCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 480 NVKIVN------------------------SDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 480 ~~~i~~------------------------~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+++|.+ ...+++.+++|.++.|.+| ++||++++|++|++|
T Consensus 326 ~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~g-v~Ig~~~vi~~gsvv 389 (401)
T 2ggo_A 326 GTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPG-VKIGAYARIYPGAVV 389 (401)
T ss_dssp TCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCC-cEECCCcEECCCCeE
Confidence 999973 4455666666666666677 788888888888864
No 6
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=7.7e-43 Score=371.80 Aligned_cols=379 Identities=19% Similarity=0.214 Sum_probs=259.5
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
++|.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.+. +
T Consensus 7 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~i~~~~~~~---------~ 73 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMYS---DLPKVLHPLAGK-PMVQHVIDAAMKLGAQHVHLVYGHGGELLKKTLADP---------S 73 (459)
T ss_dssp CCEEEEEEECCCCGGGCC---SSCGGGSEETTE-EHHHHHHHHHHHHTCSCEEEEESSCHHHHHHHC-------------
T ss_pred CcceEEEECCCCCccCCC---CCCcccCeeCCe-eHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhccC---------C
Confidence 469999999999999996 789999999987 999999999999999999999999988888887651 1
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce--eccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
+.++. + .+..|++++++.++.++++ .++||+++||+ +...++.++++.|++ .++++++.+..
T Consensus 74 ---~~~v~--~-----~~~~g~~~~i~~~~~~~~~--~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~-- 137 (459)
T 4fce_A 74 ---LNWVL--Q-----AEQLGTGHAMQQAAPHFAD--DEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLD-- 137 (459)
T ss_dssp ----CEEE--C-----SSCCCHHHHHHHHGGGSCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--
T ss_pred ---cEEEe--C-----CCCCCcHHHHHHHHHhcCC--CCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecC--
Confidence 22222 1 1238999999999987752 47999999999 445679999998864 56677776654
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCC---CCCC
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP---GAND 322 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~---~~~~ 322 (520)
++..|+.+..| +++|..+.|||...... ...+++++|+|+|+++.|.++++.... ....
T Consensus 138 ~~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 199 (459)
T 4fce_A 138 NPSGYGRIVRE-NGDVVGIVEHKDASDAQ-----------------REINEINTGILVANGRDLKRWLSLLDNNNAQGEF 199 (459)
T ss_dssp CCTTSCEEEEE-TTEEEEEECGGGCCTTG-----------------GGCCEEEEEEEEEEHHHHHHHHHTCCCCSTTCSC
T ss_pred CCCcccEEEeC-CCcEEEEEECCCCChHH-----------------hhccEEEEEEEEEEHHHHHHHHHHhCccccCCcE
Confidence 35678888887 79999999986532211 124689999999999988777764321 2233
Q ss_pred ccccchHhhhhCCceEEEEEecceE--EeCCCHHHHHHhhhhcccCC------------CCCCccccCCCccccCCCcCC
Q 010006 323 FGSEVIPGATSIGMRVQAYLYDGYW--EDIGTIEAFYNANLGITKKP------------IPDFSFYDRSAPIYTQPRYLP 388 (520)
Q Consensus 323 ~~~dil~~li~~~~~v~a~~~~g~w--~dI~t~~dy~~An~~~l~~~------------~~~~~~~~~~~~i~~~~~~~~ 388 (520)
+..|+++.+++.+.+++++..+++| ++|+|++||..++..+..+. .|...++++.+.+..++.+.|
T Consensus 200 ~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~ 279 (459)
T 4fce_A 200 YITDIIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEKLLLAGVMLLDPSRFDLRGELTHGRDITIDT 279 (459)
T ss_dssp CTTHHHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHHTCEESCGGGEEEEEEEEECSSCEECT
T ss_pred EHHHHHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHHHHhCCcEEeCCCeEEEeCcEEECCCcEECC
Confidence 4588899988878999999999766 67999999999976543211 122223444455666666666
Q ss_pred CceeecccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccc------------------ccccc-cc
Q 010006 389 PSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYY------------------ETDAD-RR 448 (520)
Q Consensus 389 ~~~i~~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~------------------~~~~~-~~ 448 (520)
.+.+. .++.||++|.|+. |.|.++.||++|.|+++|.|.++.+.+++.. ...++ ++
T Consensus 280 ~~~i~----~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~ 355 (459)
T 4fce_A 280 NVIIE----GHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKK 355 (459)
T ss_dssp TEEEE----EEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEE
T ss_pred Ceeec----cceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEee
Confidence 66553 3345555555554 5555555555555555554443333332221 11111 23
Q ss_pred ccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCc-ccccCCeEEccCe-----EEEcCCCEeCCCccC
Q 010006 449 FLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEA-ARETDGYFIKSGI-----VTIIKDALIPSGTII 520 (520)
Q Consensus 449 ~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~-~~~~~~~~I~~~~-----v~Ig~~~~i~~gtvi 520 (520)
+.+++++ .|++++.+.+++|++++.||+++++.+.+++.++ +++|++|.|+.+. ++||++++|++|++|
T Consensus 356 ~~i~~~~---~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV 430 (459)
T 4fce_A 356 ARLGKGS---KAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTV 430 (459)
T ss_dssp EEECTTC---EEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEE
T ss_pred eEEcCCC---EECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEE
Confidence 3333333 4445555567799999999999999885555442 4455555555441 789999999999875
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=1.8e-41 Score=361.00 Aligned_cols=381 Identities=18% Similarity=0.198 Sum_probs=267.5
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
+++.|||||||.|+||++ .+||+|+|++|+ |||+|++++|.++|+++|+|+++++.+++.+++.+. +
T Consensus 4 ~~~~aiIlA~G~g~Rl~~---~~pK~l~~i~gk-pli~~~l~~l~~~~~~~iivv~~~~~~~i~~~~~~~---------~ 70 (456)
T 2v0h_A 4 KALSAVILAAGKGTRMYS---DLPKVLHTIAGK-PMVKHVIDTAHQLGSENIHLIYGHGGDLMRTHLANE---------Q 70 (456)
T ss_dssp CCEEEEEECCCCCGGGCS---SSCGGGSEETTE-EHHHHHHHHHHHTTCSCEEEEECTTHHHHHHHTTTC---------C
T ss_pred CcceEEEECCCCCcccCC---CCCccccEECCc-cHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhhcC---------C
Confidence 568999999999999984 689999999987 999999999999999999999998888887776541 1
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-e-ccccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-L-YRMDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l-~~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
++++.. .+..|++++++.++.++++ .++||+++||+ + ...++.++++.|.+ +++++++.+.+
T Consensus 71 ---~~~v~~-------~~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~-- 134 (456)
T 2v0h_A 71 ---VNWVLQ-------TEQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD-- 134 (456)
T ss_dssp ---CEEEEC-------SCCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS--
T ss_pred ---cEEEeC-------CCCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC--
Confidence 223221 1238999999999877742 47899999999 3 45679999998865 57777777654
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC---CCC
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG---AND 322 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~---~~~ 322 (520)
++..|+.+..| ++++..|.|||...... ...++.++|+|+|+++.|.++++..... ...
T Consensus 135 ~~~~~g~v~~~-~g~v~~~~ek~~~~~~~-----------------~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~ 196 (456)
T 2v0h_A 135 NPTGYGRIIRE-NGNVVAIVEQKDANAEQ-----------------LNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEY 196 (456)
T ss_dssp SCTTSCEEEEE-TTEEEEEECTTTCCHHH-----------------HTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCC
T ss_pred CCCccceEEEc-CCcEEEEEECCCCChhH-----------------hcCcEEEEEEEEEEHHHHHHHHHHhccccccccE
Confidence 35678888887 78999999987632111 1246889999999999876676543322 223
Q ss_pred ccccchHhhhhCCceEEEEEecce--EEeCCCHHHHHHhhhhcccCC------------CCCCccccCCCccccCCCcCC
Q 010006 323 FGSEVIPGATSIGMRVQAYLYDGY--WEDIGTIEAFYNANLGITKKP------------IPDFSFYDRSAPIYTQPRYLP 388 (520)
Q Consensus 323 ~~~dil~~li~~~~~v~a~~~~g~--w~dI~t~~dy~~An~~~l~~~------------~~~~~~~~~~~~i~~~~~~~~ 388 (520)
+..++++.+.+.+.+++++..+++ |++|+|++||..++..+..+. .|...++.+.+.+..++.+.|
T Consensus 197 ~~~d~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~ 276 (456)
T 2v0h_A 197 YLTDLIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQASKLLLEGVMIYDPARFDLRGTLEHGKDVEIDV 276 (456)
T ss_dssp CGGGHHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEEEEEEEECSSCEECS
T ss_pred EHHHHHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCEEECCCccEEcCceEECCCCEEcC
Confidence 458889988887889999999765 579999999999987553221 011123333444455555555
Q ss_pred CceeecccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCcccccccc--ccccccCCCc--------c
Q 010006 389 PSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDAD--RRFLAAKGSV--------P 457 (520)
Q Consensus 389 ~~~i~~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~--~~~~~~~~~~--------~ 457 (520)
++.+. .+++||++|.|+. |.|.++.||++|.|+++|.|.++.+.+++.....+. ..+++|+++. .
T Consensus 277 ~~~i~----~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~ 352 (456)
T 2v0h_A 277 NVIIE----GNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKK 352 (456)
T ss_dssp SEEEE----EEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEES
T ss_pred CcEEc----CCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEec
Confidence 55543 4677888888887 888888888888888888776655544433222211 1334444431 0
Q ss_pred eeeCCCCEE------cceEECCCCEECCCcEEecCC-------CcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 458 IGIGKNSHI------KRAIIDKNARIGDNVKIVNSD-------SVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 458 ~~Ig~~~~i------~~~ii~~~~~Ig~~~~i~~~~-------~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+.|++++.+ .++.||+||.||+++++.+.+ .+++++++|.++.|..+ ++||++++|++|++|
T Consensus 353 ~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~-v~Ig~~~~ig~~s~v 427 (456)
T 2v0h_A 353 STVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAP-VKVANGATIGAGTTI 427 (456)
T ss_dssp CEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEES-EEECTTCEECTTCEE
T ss_pred cEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCC-cEECCCCEECCCCEE
Confidence 112233322 346889999999999998744 44555555555555556 789999999999875
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=2.2e-34 Score=287.42 Aligned_cols=245 Identities=21% Similarity=0.302 Sum_probs=194.4
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC-
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN- 167 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~- 167 (520)
.|+|||||||.||||+|+|+.+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+.+. ....
T Consensus 2 ~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~--~~l~~ 78 (281)
T 3juk_A 2 IKKCLFPAAGYGTRFLPITKTIPKEMLPIVDK-PLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIE--HQIQG 78 (281)
T ss_dssp CCEEEEECCSCCGGGTTGGGTSCGGGCBSSSS-BHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHTSCCC----------
T ss_pred ceEEEEECCcCCcccCccccCCCcccceECCE-EHHHHHHHHHHhCCCCEEEEEecCCHHHHHHHHhcchhhh--hhhhc
Confidence 58999999999999999999999999999997 9999999999999999999999999999999987643221 0000
Q ss_pred C-------------CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecccc-----HHHHHHHHH
Q 010006 168 E-------------GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-----YERFIQAHR 229 (520)
Q Consensus 168 ~-------------~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-----l~~ll~~h~ 229 (520)
. ..+.+....+ .+..|++++++.++.++. .++|+|++||++++.+ +.++++.|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~Gt~~al~~a~~~l~---~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~ 150 (281)
T 3juk_A 79 TNKENALKSIRNIIEKCCFSYVRQ-----KQMKGLGHAILTGEALIG---NEPFAVILADDLCISHDHPSVLKQMTSLYQ 150 (281)
T ss_dssp CCHHHHHHHHHHHHHHCEEEEEEC-----SSCCCHHHHHHHTHHHHC---SSCEEEECTTEEEECTTSCCHHHHHHHHHH
T ss_pred ccchhhhhhhhccccCccEEEEec-----CCCCCcHHHHHHHHHHcC---CCCEEEEeCCeeccCccchHHHHHHHHHHH
Confidence 0 0022222112 234899999999998885 3789999999999888 999999998
Q ss_pred hcCCcEEEEEEecCcccCcceEEEEeCC--CC--CEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEe
Q 010006 230 ETDADITVAALPMDEKRATAFGLMKIDE--EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVIS 305 (520)
Q Consensus 230 ~~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs 305 (520)
+.++ .++++...+.+++..||++..|+ +| +|..|.|||..... .++++++|+|+|+
T Consensus 151 ~~~~-~~v~~~~~~~~~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~~~-------------------~~~~~~~GiYi~~ 210 (281)
T 3juk_A 151 KYQC-SIVAIEEVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPNQEDA-------------------PSNLAVIGRYILT 210 (281)
T ss_dssp HHCS-CEEEEEECCTTTGGGSEEEEEEEEETTEEEEEEEEESCCTTTC-------------------SCSEEEEEEEEEC
T ss_pred HcCC-CEEEEEEechhhcccCCEEEeccCCCCceEEeEEEECcCCCCC-------------------CcceeEEEEEEEC
Confidence 8777 67777776656688999999986 77 99999999974321 1468899999999
Q ss_pred HHHHHHHHhhhCCC--CCCccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccC
Q 010006 306 KDVMLNLLRDKFPG--ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (520)
Q Consensus 306 ~~vl~~ll~~~~~~--~~~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~ 366 (520)
+++|. .+++..+. ......++++.+++.+ +++++.++++|.||||+++|++|++.++..
T Consensus 211 ~~~l~-~l~~~~~~~~~e~~l~d~i~~l~~~~-~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~ 271 (281)
T 3juk_A 211 PDIFE-ILSETKPGKNNEIQITDALRTQAKRK-RIIAYQFKGKRYDCGSVEGYIEASNAYYKK 271 (281)
T ss_dssp TTHHH-HHHTCCCCGGGSCCHHHHHHHHHHHS-CCEEEECCSEEEETTSHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHhcCCCCCCceeHHHHHHHHHhcC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 99986 55543221 1112388999998844 999999999999999999999999987654
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=3.3e-32 Score=270.06 Aligned_cols=236 Identities=24% Similarity=0.365 Sum_probs=192.0
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccC-hhHHHHHHHHhhhccCCCCc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFN-SASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~-~~~i~~~l~~~~~~~~~~~~ 166 (520)
+.|+|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|+++++ .+++.+++.....|++
T Consensus 23 ~~m~aiIlAaG~g~Rl~~lt~~~pK~ll~i~g~-pli~~~l~~l~~~g~~~iivv~~~~~~~~~~~~~~~~~~~~~---- 97 (269)
T 4ecm_A 23 NAMKGIILAGGTGSRLYPITKVTNKHLLPVGRY-PMIYHAVYKLKQCDITDIMIITGKEHMGDVVSFLGSGQEFGV---- 97 (269)
T ss_dssp -CEEEEEECCSCCGGGTTTTSSSCGGGSEETTE-EHHHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC----
T ss_pred cCcEEEEECCCCccccccccCCCCceecEECCE-EHHHHHHHHHHHCCCCEEEEECChhhHHHHHHHHhhccccCc----
Confidence 468999999999999999999999999999886 9999999999999999999999975 4778888876433321
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
. +.+. .+ .+..|++++++.++.+++ .++|++++||++++.++.++++.|++.++++++++.+.+ +
T Consensus 98 --~-i~~~--~~-----~~~~G~~~al~~a~~~~~---~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~--~ 162 (269)
T 4ecm_A 98 --S-FTYR--VQ-----DKAGGIAQALGLCEDFVG---NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD--D 162 (269)
T ss_dssp --E-EEEE--EC-----SSCCCHHHHHHTTHHHHT---TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS--C
T ss_pred --e-EEEe--eC-----CccCcHHHHHHHHHHhcC---CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC--C
Confidence 1 2221 11 123899999999998885 379999999999998999999999988899999888765 3
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCCc-c
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-ANDF-G 324 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~~-~ 324 (520)
+..|+++..| +|+|..|.|||..+. .+++++|+|+|++++|. .+++..+. ..++ .
T Consensus 163 ~~~~g~v~~d-~g~v~~~~ekp~~~~---------------------~~~~~~Giy~~~~~~l~-~l~~~~~~~~ge~~l 219 (269)
T 4ecm_A 163 PERFGVANIQ-NRKIIEIEEKPKEPK---------------------SSYAVTGIYLYDSKVFS-YIKELKPSARGELEI 219 (269)
T ss_dssp GGGSEEEEEE-TTEEEEEEESCSSCS---------------------CSEEEEEEEEECTTHHH-HHTSCCBCTTSCBCH
T ss_pred CCCceEEEEc-CCEEEEEEECCCCCC---------------------CcEEEEEEEEECHHHHH-hhhhcCCCCCCeeeH
Confidence 5789999887 499999999985321 45899999999999885 55433221 2333 4
Q ss_pred ccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCC
Q 010006 325 SEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~ 367 (520)
.++++.+++.+ ++.++.++++|.||||+++|.+|+..+....
T Consensus 220 ~d~l~~l~~~g-~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~~ 261 (269)
T 4ecm_A 220 TDINNWYLKRG-VLTYNEMSGWWTDAGTHVSLQRANALARDIN 261 (269)
T ss_dssp HHHHHHHHHTT-CEEEEECCSCEEECSSHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHcC-CEEEEEeCCEEEeCCCHHHHHHHHHHHHhcc
Confidence 78999998855 8999999999999999999999999887654
No 10
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.98 E-value=1.3e-31 Score=263.61 Aligned_cols=246 Identities=20% Similarity=0.292 Sum_probs=181.2
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhc--cCCCCc
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYAS--NMGGYK 166 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~--~~~~~~ 166 (520)
.|+|||||||.|+||+|+|+.+||+|+|++|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+...+ .+....
T Consensus 2 ~~~avIlAaG~gtRl~~lt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~~~ 80 (259)
T 1tzf_A 2 ASKAVILAGGLGTRLSEETIVKPKPMVEIGGK-PILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHM 80 (259)
T ss_dssp CCEEEEEECSCC--------CCCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTHHHHHHHHHTHHHHHSCEEEEG
T ss_pred CcEEEEECCCCcccCCCccCCCCccccEECCE-EHHHHHHHHHHHCCCCEEEEEcccCHHHHHHHHhhcccccccccccc
Confidence 58999999999999999999999999999987 999999999999999999999999999999999874311 100000
Q ss_pred CCCeEEEeecccCC-----CCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccccHHHHHHHHHhcCCcEEEEEEe
Q 010006 167 NEGFVEVLAAQQSP-----ENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQAHRETDADITVAALP 241 (520)
Q Consensus 167 ~~~~v~vl~~~~~~-----~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~dl~~ll~~h~~~~a~~tl~~~~ 241 (520)
+...+++++....+ .+.....|++++++.++.+++. .++|++++||++++.++.++++.|.+.++++++...+
T Consensus 81 ~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~--~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~~ 158 (259)
T 1tzf_A 81 AENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKD--DEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTATF 158 (259)
T ss_dssp GGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTT--SSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEEC
T ss_pred cccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCC--CCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEec
Confidence 00012222110000 0001137999999999887742 4789999999998889999999998888887765432
Q ss_pred cCcccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 010006 242 MDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (520)
Q Consensus 242 ~~~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (520)
++..|+++.+| +|+|..|.|||... .+++++|+|+|++++|. .++. ...
T Consensus 159 ----~~~~~g~v~~~-~g~v~~~~ekp~~~----------------------~~~~~~Giy~~~~~~l~-~l~~---~~~ 207 (259)
T 1tzf_A 159 ----PPGRFGALDIQ-AGQVRSFQEKPKGD----------------------GAMINGGFFVLNPSVID-LIDN---DAT 207 (259)
T ss_dssp ----CCCCSEEEEEE-TTEEEEEEESCSCC----------------------SCCEECCCEEECGGGGG-GCCS---TTC
T ss_pred ----CCCCccEEEEc-CCEEEEEEecCCCC----------------------CceEEEEEEEeCHHHHH-hhcc---ccc
Confidence 35689988888 79999999998642 24889999999999874 3321 223
Q ss_pred CccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCCCC
Q 010006 322 DFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIP 369 (520)
Q Consensus 322 ~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~~~ 369 (520)
+|..++++.+++. .+++++.++++|.||||++||.+++..+.....|
T Consensus 208 ~~~~~~i~~~~~~-~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~~~~p 254 (259)
T 1tzf_A 208 TWEQEPLMTLAQQ-GELMAFEHPGFWQPMDTLRDKVYLEGLWEKGKAP 254 (259)
T ss_dssp CTTTHHHHHHHHT-TCEEEEEECSCEEECCSHHHHHHHHHHHHTTCCT
T ss_pred ccHHHHHHHHHHc-CCEEEEEeCcEEEeCCCHHHHHHHHHHHhcCCCC
Confidence 5667889998874 4899999999999999999999999988765533
No 11
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.98 E-value=2.2e-31 Score=268.38 Aligned_cols=245 Identities=23% Similarity=0.308 Sum_probs=188.6
Q ss_pred cccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhcc--C-
Q 010006 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN--M- 162 (520)
Q Consensus 86 ~~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~--~- 162 (520)
+|+.|+|||||||.||||+|+|+.+||+|+|++|+ |||+|+++++.++|+++|+|+++++.+++.+|+.+.+.+. +
T Consensus 5 ~~~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 83 (302)
T 2e3d_A 5 NTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDK-PLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLE 83 (302)
T ss_dssp CCSCCEEEEECCSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECGGGHHHHHHHSCCHHHHHHHC
T ss_pred hhcccEEEEECCcCcccCCccccCCCceeeEECCe-EHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHhcchhhhhhhh
Confidence 34568999999999999999999999999999987 9999999999999999999999998899999987532110 0
Q ss_pred --CC-----------CcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccc--------cH
Q 010006 163 --GG-----------YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRM--------DY 221 (520)
Q Consensus 163 --~~-----------~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~--------dl 221 (520)
+. ..+ ..+.++. + .+..|++++++.++.++. .++|++++||++++. ++
T Consensus 84 ~~~~~~~l~~~~~~~~~~-~~i~~~~--~-----~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~~~~~~l 152 (302)
T 2e3d_A 84 KRVKRQLLDEVQSICPPH-VTIMQVR--Q-----GLAKGLGHAVLCAHPVVG---DEPVAVILPDVILDEYESDLSQDNL 152 (302)
T ss_dssp ----CHHHHHHHHTSCTT-CEEEEEE--C-----SSCCCHHHHHHHTHHHHC---SSCEEEECTTEEECTTSSCTTTSTH
T ss_pred hccchhhhhhhhhccccC-cceEEee--C-----CccCCHHHHHHHHHHHcC---CCcEEEEcCCccccCccccchHHHH
Confidence 00 001 0122221 1 234899999999998885 368999999998762 79
Q ss_pred HHHHHHHHhcCCcEEEEEEecCcccCcceEEEEeC----CCC---CEEEeeeCCChhhhhhcccccccccCCchhhccCC
Q 010006 222 ERFIQAHRETDADITVAALPMDEKRATAFGLMKID----EEG---RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMP 294 (520)
Q Consensus 222 ~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d----~~g---~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
.++++.|++.++ +++++.+. ++++.||++..+ ++| +|..|.|||..... .+
T Consensus 153 ~~l~~~~~~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~-------------------~~ 210 (302)
T 2e3d_A 153 AEMIRRFDETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVA-------------------PS 210 (302)
T ss_dssp HHHHHHHHHHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTC-------------------SC
T ss_pred HHHHHHHHhcCC-cEEEEEEc--cCCCCccEEEecccccCCCCceeEEEEEECCCCCcc-------------------cc
Confidence 999999988776 67777765 346789999874 456 89999999864321 14
Q ss_pred ceeeeeEEEEeHHHHHHHHhhhCCC--CCCccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccC
Q 010006 295 YIASMGIYVISKDVMLNLLRDKFPG--ANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (520)
Q Consensus 295 ~l~~~GIyifs~~vl~~ll~~~~~~--~~~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~ 366 (520)
+++++|+|+|++++|. .+++..+. ...+..++++.+++.+ +++++.++++|.||||+++|+++++.++..
T Consensus 211 ~~~~~Giyi~~~~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~~-~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 211 NLAIVGRYVLSADIWP-LLAKTPPGAGDEIQLTDAIDMLIEKE-TVEAYHMKGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp SEEEEEEEEECTTHHH-HHTCCCC----CCCHHHHHHHHHHHS-CEEEEECCSCEEECSSHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEECHHHHH-HHHhhCCCCCCceehHHHHHHHHHhC-CEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 6899999999999886 55543332 1223478888888755 999999999999999999999999766543
No 12
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.97 E-value=2.1e-31 Score=267.94 Aligned_cols=246 Identities=20% Similarity=0.270 Sum_probs=171.2
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhcc-----C
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN-----M 162 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~-----~ 162 (520)
+.|+|||||||.||||+|+|+.+||+|+|++|+ |||+|+++++.++|+++|+|+++++.+++.+++.+.+.+. .
T Consensus 13 ~~~~avIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~~ 91 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPATKAMPKEMLPVVDR-PLIQYAVDEAVEAGIEQMIFVTGRGKSALEDHFDIAYELEATMAAR 91 (297)
T ss_dssp CCCEEEEEECCCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHTSCCHHHHHHHHTT
T ss_pred CccEEEEECCCCccccCccccCCCceeeeECCe-EHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHhhhhhhhhhhhhc
Confidence 568999999999999999999999999999987 9999999999999999999999998899999886532100 0
Q ss_pred CC---------CcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecc---ccHHHHHHHHHh
Q 010006 163 GG---------YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR---MDYERFIQAHRE 230 (520)
Q Consensus 163 ~~---------~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~---~dl~~ll~~h~~ 230 (520)
+. ..+ ..+.++. + .+..|++++++.++.+++ .++|++++||++++ .++.++++.|++
T Consensus 92 ~~~~~~~~~~~~~g-~~i~~~~--~-----~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~l~~l~~~~~~ 160 (297)
T 2ux8_A 92 GKSLDVLDGTRLKP-GNIAYVR--Q-----QEPMGLGHAVWCARDIVG---DEPFAVLLPDDFMFGQPGCLKQMVDAYNK 160 (297)
T ss_dssp TCCGGGGTTSCCST-TSEEEEE--C-----CSCCCHHHHHHTTHHHHC---SSCEEEECTTEEEESSSCHHHHHHHHHHH
T ss_pred cchhhhhhhcccCC-CceEEEe--C-----CCCCChHHHHHHHHHHcC---CCcEEEEeCCeecCCChHHHHHHHHHHHh
Confidence 00 001 1133322 1 134899999999998875 37899999999877 569999999987
Q ss_pred cCCcEEEEEEecCcccCcceEEEEeCC--CC--CEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeH
Q 010006 231 TDADITVAALPMDEKRATAFGLMKIDE--EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISK 306 (520)
Q Consensus 231 ~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~ 306 (520)
.++ .++++.+.+.+++..||++..|+ ++ +|..|.|||..... .++++++|+|+|++
T Consensus 161 ~~~-~~i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~-------------------~~~~~~~Giyi~~~ 220 (297)
T 2ux8_A 161 VGG-NLICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTA-------------------PSNLSVIGRYILQP 220 (297)
T ss_dssp HCS-EEEEEC-----------CCCCCCBCSSEEEC---------------------------------CCCEEEEEEECT
T ss_pred cCC-CEEEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCC-------------------CccEEEEEEEEECH
Confidence 765 56666665444567899887663 45 89999999864221 13588999999999
Q ss_pred HHHHHHHhhhCCC-CCCc-cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCC
Q 010006 307 DVMLNLLRDKFPG-ANDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (520)
Q Consensus 307 ~vl~~ll~~~~~~-~~~~-~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~ 367 (520)
++|. .+++..++ ..++ ..++++.+++. .+++++.++++|.||||+++|.+++..+....
T Consensus 221 ~~l~-~l~~~~~~~~~~~~l~d~i~~l~~~-~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~ 281 (297)
T 2ux8_A 221 EVMR-ILENQGKGAGGEIQLTDAMQRMIGD-QPFHGVTFQGTRYDCGDKAGFIQANLAVALSR 281 (297)
T ss_dssp HHHH-HHHHTC--------CCTTGGGGTTT-SCEEEEECSSEEEETTSHHHHHHHHHHHHHHC
T ss_pred HHHH-HHHhhCCCCCCeeEHHHHHHHHHhc-CCEEEEEecceEEeCCCHHHHHHHHHHHHhcC
Confidence 9886 55543332 1122 37889988874 59999999999999999999999998776543
No 13
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=1.1e-30 Score=265.80 Aligned_cols=249 Identities=20% Similarity=0.254 Sum_probs=190.1
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhcc--CCC-
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASN--MGG- 164 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~--~~~- 164 (520)
+.|+|||||||.||||+|+|+.+||+|+||+|+ |||+|+++++.++|+++|+|+++++.+++.+|+...+.|. +..
T Consensus 11 ~~~~aVIlAaG~gtRl~plt~~~pK~ll~i~gk-pli~~~l~~l~~~gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~~~ 89 (323)
T 2pa4_A 11 AVKTVVVPAAGLGTRFLPATKTVPKELLPVVDT-PGIELIAAEAAELGATRLAIITAPNKAGVLAHFERSSELEETLMER 89 (323)
T ss_dssp -CCEEEEECCCCCGGGTTGGGTSCGGGCEETTE-EHHHHHHHHHHHTTCCEEEEEECTTCHHHHHTTSCCHHHHHHHHHT
T ss_pred cceEEEEECCCCccccCccccCCCceeeeECCE-EHHHHHHHHHHhCCCCEEEEEecCcHHHHHHHHhccchhhhhhhcc
Confidence 358999999999999999999999999999987 9999999999999999999999998899988876533221 000
Q ss_pred ----------C--cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecc--ccHHHHHHHHHh
Q 010006 165 ----------Y--KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYR--MDYERFIQAHRE 230 (520)
Q Consensus 165 ----------~--~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~--~dl~~ll~~h~~ 230 (520)
. .+ ..+.++. + .+..|++++++.++.++.+ ..+.|++++||++++ .++.++++.|++
T Consensus 90 ~~~~~~~~~~~~~~g-~~i~~~~--~-----~~~~Gt~~al~~a~~~l~~-~~d~~lv~~~D~~~~~~~~l~~l~~~~~~ 160 (323)
T 2pa4_A 90 GKTDQVEIIRRAADL-IKAVPVT--Q-----DKPLGLGHAVGLAESVLDD-DEDVVAVMLPDDLVLPTGVMERMAQVRAE 160 (323)
T ss_dssp TCHHHHHHTTHHHHH-CEEEEEE--C-----SSCCCHHHHHHTTGGGSCS-SCCEEEEECTTEEEESSCHHHHHHHHHHT
T ss_pred chhhhhhhhhccccC-cceEEEe--C-----CccCCcHHHHHHHHHHhcC-CCCeEEEEeCCcccCchHHHHHHHHHHHh
Confidence 0 00 1122221 1 1238999999999877753 123499999999876 569999999987
Q ss_pred cCCcEEEEEEecCcccCcceEEEEeC----CCC--CEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEE
Q 010006 231 TDADITVAALPMDEKRATAFGLMKID----EEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVI 304 (520)
Q Consensus 231 ~~a~~tl~~~~~~~~~~~~~g~v~~d----~~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyif 304 (520)
.++ .++++.+.+.++...||++..| +++ +|..|.|||..... .+++.++|+|+|
T Consensus 161 ~~~-~~i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~-------------------~~~~~~~GiY~~ 220 (323)
T 2pa4_A 161 FGG-SVLCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDA-------------------PSRLAATGRYLL 220 (323)
T ss_dssp TCS-EEEEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTC-------------------SCSEEEEEEEEE
T ss_pred cCC-cEEEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccc-------------------cccEEEEEEEEE
Confidence 665 5666666654567789999876 454 99999999864321 146889999999
Q ss_pred eHHHHHHHHhhhCCCC-CCc-cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCC
Q 010006 305 SKDVMLNLLRDKFPGA-NDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (520)
Q Consensus 305 s~~vl~~ll~~~~~~~-~~~-~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~ 367 (520)
++++|. .+++..++. .++ ..++++.+++.+.+++++.++++|.||||+++|.++++.++...
T Consensus 221 ~~~~~~-~l~~~~~~~~ge~~l~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~~~ 284 (323)
T 2pa4_A 221 DRKIFD-ALRRITPGAGGELQLTDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGLSH 284 (323)
T ss_dssp ETHHHH-HHHHCCCCGGGCCCHHHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHHTC
T ss_pred CHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhhcC
Confidence 999886 444433321 223 37889999886789999999999999999999999998776543
No 14
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.97 E-value=2.1e-30 Score=261.49 Aligned_cols=258 Identities=14% Similarity=0.173 Sum_probs=188.4
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceec--CCccchhHHHHHHhHhCCCCeEEEEeccCh-hHHHHHHHHhhhccCC
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPL--GANYRLIDIPVSNCLNSNISKIYVLTQFNS-ASLNRHLSRAYASNMG 163 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv--~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~ 163 (520)
||+|.|||||||.|+||+| ||+|+|+ +|+ |||+|+++++.++|+++|+|++++.. +.+.+|+.+.+.+...
T Consensus 3 ~m~~~~vIlAaG~g~R~~~-----~K~l~~ig~~g~-pli~~~l~~~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 3 AMKPTLFVLAAGMGSRYGS-----LKQLDGIGPGGD-TIMDYSVYDAIRAGFGRLVFVIRHSFEKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCCEEEEECTTCBCTTSS-----BCCCCCCSTTSC-CHHHHHHHHHHHHTCCEEEEEECGGGHHHHHHHTHHHHTTTSC
T ss_pred CCceEEEEECCCCcccCCC-----CceEeEcCCCCe-eHHHHHHHHHHHCCCCeEEEEcCchHHHHHHHHHHHHhccCCc
Confidence 5678999999999999997 6999999 476 99999999999999999999999984 8999999886655321
Q ss_pred CCcCCCeEEEe-eccc-------CCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecccc-HHHHHHHHHh---c
Q 010006 164 GYKNEGFVEVL-AAQQ-------SPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRE---T 231 (520)
Q Consensus 164 ~~~~~~~v~vl-~~~~-------~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~---~ 231 (520)
+.++ +... ......+.+||+++|++++.+++ ++|+|++||++++.+ +.++++.|.+ .
T Consensus 77 -------i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~ 145 (303)
T 3pnn_A 77 -------VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGK 145 (303)
T ss_dssp -------EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTC
T ss_pred -------EEEEecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccc
Confidence 2222 1100 00001135899999999988773 689999999999876 9999999975 5
Q ss_pred CCcEEEEEEecCcccCcce-----EEEEeCCCCCEEEeeeCCChhhhhh-cccccccccCCchhhccCCceeeeeEEEEe
Q 010006 232 DADITVAALPMDEKRATAF-----GLMKIDEEGRIIEFSEKPKGEQLKA-MKVDTTILGLDDERAKEMPYIASMGIYVIS 305 (520)
Q Consensus 232 ~a~~tl~~~~~~~~~~~~~-----g~v~~d~~g~V~~~~ekp~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~GIyifs 305 (520)
++++++++.+.++. .+.| |++.+|++|+|+.|.|||....... ..++.. -+ .......+.++++|+|+|+
T Consensus 146 ~~~~~v~~~~~~~~-~~~~g~~~~G~v~~d~~g~v~~i~Ekp~~~~~~~~~~~~~~-~g--~~~~~~~~~~i~~GiY~f~ 221 (303)
T 3pnn_A 146 QGEYCMVGYRVGNT-LSESGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDE-TG--KICTLAEDAPVSMNMWGFT 221 (303)
T ss_dssp SSEEEEEEEEGGGS-CBTTBCEEEEEEEECTTSBEEEEEEEEEEEEETTEEEEECT-TS--CEEEECTTCEEEEEEEEEC
T ss_pred cCceEEEEEECCCc-cCccCceeeeeEeeCCCCcEEEEEECCCCcccccccccccc-cc--ccccCCCCCEEEEEEEEEC
Confidence 67888888876532 1444 7888998899999999997531000 000000 00 0000012468999999999
Q ss_pred HHHHHHHHh-------hhCC--CCCCccccchHhhhhCCc-eEEEEEecceEEeCCCHHHHHHhhhhccc
Q 010006 306 KDVMLNLLR-------DKFP--GANDFGSEVIPGATSIGM-RVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (520)
Q Consensus 306 ~~vl~~ll~-------~~~~--~~~~~~~dil~~li~~~~-~v~a~~~~g~w~dI~t~~dy~~An~~~l~ 365 (520)
+++|..+.+ +..+ ....+..++++.+++++. +++++.++++|+||||+++|.+++..+..
T Consensus 222 ~~~~~~l~~~~~~~l~~~~~~~~~e~~l~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~~ 291 (303)
T 3pnn_A 222 PDYFDYSEELFINFLNAHGQEPKSEFFIPFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLRE 291 (303)
T ss_dssp THHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCcEEhHHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHHH
Confidence 999874422 0111 222345889999998776 99999999999999999999999887643
No 15
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=3e-30 Score=253.96 Aligned_cols=227 Identities=11% Similarity=0.088 Sum_probs=172.8
Q ss_pred EEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHh-CCCCeEEEEeccChhHHHHHHHHhhh-ccCCCCcCCC
Q 010006 92 GIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLN-SNISKIYVLTQFNSASLNRHLSRAYA-SNMGGYKNEG 169 (520)
Q Consensus 92 aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~-~~~~~~~~~~ 169 (520)
+||||||.||||+|+|..+||||+||+|+ |||+|+|+++.+ +|+++|+|++++..+ +.+++.+... ++. .
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~llpv~gk-pli~~~l~~l~~~~gi~~iivv~~~~~~-~~~~~~~~~~~~~~------~ 73 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKYMLEAHGQ-TLFEHSVNSFAAYFASTPFLFIVRNVYD-TAVFVREKATQLGI------K 73 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGGGCEETTE-EHHHHHHGGGGGGTTTSCEEEEEESSTT-HHHHHHHHHHHHTC------S
T ss_pred EEEEcCCCCcccccCCCCCCccccEECCe-EHHHHHHHHHhccCCCceEEEEECchhh-hHHHHHHHHHHcCC------C
Confidence 79999999999999999999999999987 999999999999 799999999998876 6566655321 111 1
Q ss_pred eEEEeecccCCCCCCCccCcHHHHHHHHHHhhh---cCcceEEEEeCceec-cccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEE---HNVLEFLVLAGDHLY-RMDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 170 ~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~---~~~~~~Lvl~gD~l~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
.+.++.. + .+..||++++++++.++.. ..+++|+|++||+++ +.++.++ ..+++.++++.+.+.
T Consensus 74 ~~~~~~~-~-----~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~~- 141 (255)
T 4evw_A 74 QFYIAEL-H-----TETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGGG- 141 (255)
T ss_dssp SEEEEEE-S-----SCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECCS-
T ss_pred CceEEEe-C-----CCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecCC-
Confidence 1112111 1 1348999999999998831 135789999999988 4556543 245678888887653
Q ss_pred cCcceEEEEeCCCC--CEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHH-HHHHHHh----hhCC
Q 010006 246 RATAFGLMKIDEEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKD-VMLNLLR----DKFP 318 (520)
Q Consensus 246 ~~~~~g~v~~d~~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~-vl~~ll~----~~~~ 318 (520)
+ .||++..|++| +|++|.||+.. ++++++|+|+|++. .|.+.+. ...+
T Consensus 142 -p-~yG~v~~d~~g~~~V~~i~EK~~~-----------------------s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~ 196 (255)
T 4evw_A 142 -D-NWSFAKPEHAGSTKVIQTAEKNPI-----------------------SDLCSTGLYHFNRKEDYLEAYREYVARPSQ 196 (255)
T ss_dssp -S-CSCEEEESSTTCCBEEEEESSSCS-----------------------SSEEEEEEEEESCHHHHHHHHHHHHTSCGG
T ss_pred -C-ceeEEEECCCCCeEEEEEEeccCc-----------------------cCcEEEeEEEECcHHHHHHHHHHHHhcccc
Confidence 3 89999999888 99999999432 34899999999975 3433332 2211
Q ss_pred ---CCCCccccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhc
Q 010006 319 ---GANDFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 319 ---~~~~~~~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~ 363 (520)
....+.+|+++.+++.+.++.++.++ ++|+|+||+++|.++....
T Consensus 197 ~~~~gE~~ltd~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~~~ 245 (255)
T 4evw_A 197 EWERGELYIAPLYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLRQP 245 (255)
T ss_dssp GCSCSCCCSTTHHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHHC-
T ss_pred cccCCeEehHHHHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHhcC
Confidence 23345689999999888999999996 9999999999999987654
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.97 E-value=1.9e-29 Score=253.23 Aligned_cols=233 Identities=23% Similarity=0.366 Sum_probs=182.6
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEec-cChhHHHHHHHHhhhccCCCCcC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
+|+|||||||.||||+|+|..+||+|+|++|+ |||+|+++++..+|+++|+|++. ++.+.+.+++.+...|++
T Consensus 2 ~~~aIILAgG~gtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g~----- 75 (293)
T 1fxo_A 2 KRKGIILAGGSGTRLHPATLAISKQLLPVYDK-PMIYYPLSTLMLAGIREILIISTPQDTPRFQQLLGDGSNWGL----- 75 (293)
T ss_dssp CEEEEEECCCCCTTTTTHHHHSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC-----
T ss_pred CceEEEECCCCCCcCccccCCCCceeCeECCE-eHHHHHHHHHHHCCCCEEEEEeccccHHHHHHHHhcccccCc-----
Confidence 58999999999999999999999999999987 99999999999999999998884 567788888877544321
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCcee-ccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
. +.+. .+. ...|+++++..++.++.+ ++++++.||++ .+.++.++++.|.+.+.++++++.++.+
T Consensus 76 -~-i~~~--~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d-- 141 (293)
T 1fxo_A 76 -D-LQYA--VQP-----SPDGLAQAFLIGESFIGN---DLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVLD-- 141 (293)
T ss_dssp -E-EEEE--ECS-----SCCCGGGHHHHTHHHHTT---SEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECSC--
T ss_pred -e-EEEe--eCC-----CCCCHHHHHHHHHHHhCC---CCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECCC--
Confidence 1 2222 121 137999999999988853 68888889995 4678999999998777778877777543
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCCc-c
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-ANDF-G 324 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~~-~ 324 (520)
+..||++..|++|+|..|.|||..+. ++++.+|+|+|+++++. .++...+. ..++ .
T Consensus 142 p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~-~~~~~~~~~~ge~~~ 199 (293)
T 1fxo_A 142 PERYGVVEFDQGGKAISLEEKPLEPK---------------------SNYAVTGLYFYDQQVVD-IARDLKPSPRGELEI 199 (293)
T ss_dssp GGGSEEEEECTTSCEEEEEESCSSCS---------------------SSEEEEEEEEECTTHHH-HHHHCCCCTTSSCCH
T ss_pred cccCcEEEECCCCcEEEEEECCCCCC---------------------CCeEEEEEEEEcHHHHH-HHHhcCcccCCceeH
Confidence 56899999998899999999985332 35889999999999987 44433332 2233 3
Q ss_pred ccchHhhhhCCceEEEEEec-ce-EEeCCCHHHHHHhhhhcc
Q 010006 325 SEVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~-g~-w~dI~t~~dy~~An~~~l 364 (520)
.|+++.+++ ..++.++... ++ |.||||++||.+|+..+.
T Consensus 200 td~~~~~l~-~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 240 (293)
T 1fxo_A 200 TDVNRAYLE-RGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIA 240 (293)
T ss_dssp HHHHHHHHH-TTCEEEEECCTTSEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHH
Confidence 788888887 4467777775 74 999999999999987653
No 17
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.97 E-value=4.2e-29 Score=250.88 Aligned_cols=233 Identities=22% Similarity=0.352 Sum_probs=181.9
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEec-cChhHHHHHHHHhhhccCCCCcC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
+|+|||||||.||||+|+|..+||+|+|++|+ |||+|+++.+..+|+++|+|+++ ++.+.+.+++.+...|++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~Iivv~~~~~~~~i~~~l~~g~~~g~----- 76 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPITRAVSKQLLPIYDK-PMIYYPLSVLMLAGIRDILIISTPRDLPLYRDLLGDGSQFGV----- 76 (295)
T ss_dssp SCEEEEECCCCCSTTTTTTTSSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTS-----
T ss_pred ceEEEEECCCCCCccccccCCCCceecEECCe-eHHHHHHHHHHHCCCCeEEEEeccchHHHHHHHhhhccccCc-----
Confidence 37999999999999999999999999999987 99999999999999999999886 667888888877544421
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCcee-ccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
. +.+. .+. +..|+++++..++.++.+ ++++++.||++ ++.++.++++.|.+.+.++++++.++.+
T Consensus 77 -~-i~~~--~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d-- 142 (295)
T 1lvw_A 77 -R-FSYR--VQE-----EPRGIADAFIVGKDFIGD---SKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVRD-- 142 (295)
T ss_dssp -E-EEEE--ECS-----SCCCGGGHHHHTHHHHTT---SCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECSC--
T ss_pred -e-EEEe--eCC-----CCCChHHHHHHHHHHhCC---CcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECCC--
Confidence 1 2222 121 137999999999988853 67888889994 4678999999998777778887777643
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCCc-c
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-ANDF-G 324 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~~-~ 324 (520)
+..||++..|++++|..|.|||..+. +++..+|+|+|+++++.. +....+. ..++ .
T Consensus 143 p~~~g~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~f~~~~l~~-~~~~~~~~~ge~~~ 200 (295)
T 1lvw_A 143 PRPFGVVEFDSEGRVISIEEKPSRPK---------------------SNYVVPGLYFYDNQVVEI-ARRIEPSDRGELEI 200 (295)
T ss_dssp CTTSEEEEECTTSBEEEEEESCSSCS---------------------CSEECCSEEEECTTHHHH-HHHCCCCTTSCCCH
T ss_pred cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEeEEEcHHHHHH-HHhcCCcccCceeH
Confidence 55799999998999999999985332 348899999999999874 4433322 2223 3
Q ss_pred ccchHhhhhCCceEEEEEec-ce-EEeCCCHHHHHHhhhhcc
Q 010006 325 SEVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~-g~-w~dI~t~~dy~~An~~~l 364 (520)
+++++.+++ ..++.++.+. ++ |.||||++||.+++..+.
T Consensus 201 td~~~~~l~-~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (295)
T 1lvw_A 201 TSVNEEYLR-MGKLRVELMGRGMAWLDTGTHDGLLEASSFIE 241 (295)
T ss_dssp HHHHHHHHH-TTCEEEEEECTTCEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHH
Confidence 778888787 4467777775 64 999999999999987653
No 18
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.96 E-value=2.7e-29 Score=252.41 Aligned_cols=233 Identities=22% Similarity=0.339 Sum_probs=181.8
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEec-cChhHHHHHHHHhhhccCCCCcC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQ-FNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~-~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
.|+|||||||.||||+|+|..+||+|+||+|+ |||+|+++.+..+|+++|+|+++ ++.+.+.+++.+...|++
T Consensus 3 ~m~aIILAgG~GtRl~plT~~~pK~llpi~gk-pli~~~l~~l~~~gi~~I~vv~~~~~~~~i~~~l~~g~~~g~----- 76 (296)
T 1mc3_A 3 HMKGIILAGGSGTRLHPITRGVSKQLLPIYDK-PMIYYPLSVLMLAGIREILIITTPEDKGYFQRLLGDGSEFGI----- 76 (296)
T ss_dssp CCEEEEECCCCCGGGHHHHTTSCGGGSEETTE-ETTHHHHHHHHHTTCCEEEEEECTTTHHHHHHHHTTSGGGTC-----
T ss_pred ccEEEEECCCCCCcCCcccCCCCceeeEECCe-eHHHHHHHHHHhCCCCcEEEEechhHHHHHHHHHhcccccCc-----
Confidence 37999999999999999999999999999997 99999999999999999999886 667888888877443321
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCcee-ccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
. +.+. .+. +..|+++++..++.++.+ ++++++.||++ ++.++.++++.|.+.+.++++++.++.+
T Consensus 77 -~-i~~~--~~~-----~~~G~~~al~~a~~~i~~---~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~d-- 142 (296)
T 1mc3_A 77 -Q-LEYA--EQP-----SPDGLAQAFIIGETFLNG---EPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMD-- 142 (296)
T ss_dssp -E-EEEE--ECS-----SCCCSTHHHHHTHHHHTT---SCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECSC--
T ss_pred -e-EEEe--ccC-----CCCCHHHHHHHHHHHhCC---CCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECCC--
Confidence 1 2222 121 137999999999988853 67877889984 4678999999997766777887777543
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCCc-c
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-ANDF-G 324 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~~-~ 324 (520)
+..||++..|++|+|..|.|||..+. ++++.+|+|+|+++++. .++...+. ..++ .
T Consensus 143 p~~yg~v~~d~~g~v~~~~ekp~~~~---------------------s~~~~~Giy~~~~~~l~-~~~~~~~~~~ge~~~ 200 (296)
T 1mc3_A 143 PERFGVVEFDDNFRAISLEEKPKQPK---------------------SNWAVTGLYFYDSKVVE-YAKQVKPSERGELEI 200 (296)
T ss_dssp CSSSBBCEEETTEEEEECCBSCSSCS---------------------CSEEEEEEEECCTHHHH-HHHSCCCCSSSSCCH
T ss_pred cccCCEEEECCCCcEEEEEECCCCCC---------------------CCEEEEEEEEEcHHHHH-HHHhcCccccCCccH
Confidence 55899999988899999999986332 35889999999999986 44433332 2223 3
Q ss_pred ccchHhhhhCCceEEEEEec-ce-EEeCCCHHHHHHhhhhcc
Q 010006 325 SEVIPGATSIGMRVQAYLYD-GY-WEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~-g~-w~dI~t~~dy~~An~~~l 364 (520)
.++++.+++ ..++.++.+. ++ |.||||+++|.+++..+.
T Consensus 201 td~~~~~l~-~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~ 241 (296)
T 1mc3_A 201 TSINQMYLE-AGNLTVELLGRGFAWLDTGTHDSLIEASTFVQ 241 (296)
T ss_dssp HHHHHHHHH-TTCEEEEECCTTCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHH
Confidence 778888887 4467777775 75 999999999999987654
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=4.1e-29 Score=252.63 Aligned_cols=242 Identities=18% Similarity=0.285 Sum_probs=156.7
Q ss_pred cceEEEEEeCCCCCCCCcccc-CCCccceecC-CccchhHHHHHHhHhCCCCeEEEEeccCh-hHHHHHHHHhhhccCCC
Q 010006 88 RSVLGIILGGGAGTRLYPLTK-KRAKPAVPLG-ANYRLIDIPVSNCLNSNISKIYVLTQFNS-ASLNRHLSRAYASNMGG 164 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~-~~pK~Llpv~-G~~plI~~~l~~l~~~gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~ 164 (520)
++|+|||||||.||||+|||. .+||+|+|++ |+ |||+|+++++.++ +++|+|+++++. +.+.+++.+. |+
T Consensus 3 ~~~~avIlAgG~gtRl~plt~~~~pK~ll~i~gg~-pli~~~l~~l~~~-~~~i~vv~~~~~~~~i~~~~~~~--~~--- 75 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPLSRSLYPKQFLKLFDHK-SLFELSFKRNASL-VDETLIVCNEKHYFLALEEIKNE--IK--- 75 (308)
T ss_dssp CCEEEEEECC-------------CCGGGCTTBTTB-CHHHHHHHHHHTT-CSEEEEEEEGGGHHHHHHHTTTT--CS---
T ss_pred CccEEEEEcCCCCccCCccCCCCCCCEEEECCCCC-CHHHHHHHHHHcc-CCCEEEEEChhHHHHHHHHHHHh--hC---
Confidence 468999999999999999997 7999999995 65 9999999999999 999999999874 5677777652 11
Q ss_pred CcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceec-ccc-HHHHHHH---HHhcCCcEEEEE
Q 010006 165 YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLY-RMD-YERFIQA---HRETDADITVAA 239 (520)
Q Consensus 165 ~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~-~~d-l~~ll~~---h~~~~a~~tl~~ 239 (520)
...+.++... +..||+++++.++.++. .++.|++++||+++ +.+ +.++++. |.+.++++|+++
T Consensus 76 ---~~~~~~i~~~-------~~~gt~~al~~a~~~l~--~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 143 (308)
T 2qh5_A 76 ---NKSVGFLLES-------LSKNTANAIALSALMSD--KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGV 143 (308)
T ss_dssp ---SCEEEEEEES-------SCCCHHHHHHHHHHTSC--TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---CCccEEEeCC-------CCCChHHHHHHHHHHhC--CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 1012232211 13799999999988773 23469999999987 666 9999987 667777888887
Q ss_pred EecCcccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC
Q 010006 240 LPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG 319 (520)
Q Consensus 240 ~~~~~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~ 319 (520)
.+.. ++..||++..|++++|..|.|||.......+ ....++++++|+|+|++++|.+.+++..+.
T Consensus 144 ~~~~--~~~~~g~i~~d~~~~V~~~~Ekp~~~~~~~~-------------~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~ 208 (308)
T 2qh5_A 144 SIDK--PNTEFGYIESPNGLDVKRFIEKPSLDKAIEF-------------QKSGGFYFNSGMFVFQAGVFLDELKKHAPT 208 (308)
T ss_dssp ECSS--CCTTSEEEECSSSSBCSEEEESCCHHHHHHH-------------HHHCCEEEEEEEEEEEHHHHHHHHHHHCHH
T ss_pred ecCC--CCCCceEEEECCCCEEEEEEECCChHHHHHH-------------hhcCCeEEEeEEEEEEHHHHHHHHHHhChH
Confidence 7653 3578999988877999999999986532211 011246899999999998874454432211
Q ss_pred ------------C------CCcc---ccchH--------h-hhhCCceEEEEEecceEEeCCCHHHHHHhhhhc
Q 010006 320 ------------A------NDFG---SEVIP--------G-ATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 320 ------------~------~~~~---~dil~--------~-li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~ 363 (520)
. .++. .++++ . +++.+.++++++++++|.||||+++|++++...
T Consensus 209 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~~ 282 (308)
T 2qh5_A 209 ILKGCERAFESLENAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANE 282 (308)
T ss_dssp HHHHHHHHGGGCEEECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC--------------
T ss_pred HHHHHHHHhhccccccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhcC
Confidence 0 1111 24443 2 566578999999999999999999999998754
No 20
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.95 E-value=5.7e-28 Score=246.96 Aligned_cols=235 Identities=20% Similarity=0.296 Sum_probs=172.8
Q ss_pred eEEEEEeCCCCCCCCccc-cCCCccceecCCccchhHHHHHHhHhC-CCCeEEEEeccCh-hHHHHHHHHhhhccCCCCc
Q 010006 90 VLGIILGGGAGTRLYPLT-KKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT-~~~pK~Llpv~G~~plI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~ 166 (520)
|++||||||.||||+||| +..||+|+|++|.+|||+|+++++.++ |+++|+|+++++. +.+.+++.+...+
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~~~------ 75 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELPDE------ 75 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSCGG------
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccccc------
Confidence 799999999999999999 779999999998349999999999996 8999999999864 5667777652111
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceeccc--cHH----HHHHHHHhcCCcEEEEEE
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRM--DYE----RFIQAHRETDADITVAAL 240 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~--dl~----~ll~~h~~~~a~~tl~~~ 240 (520)
. + ++.+ +..||+.++..+...+. .++.+++++||+++.. ++. .+++.|++.++.+|+.+.
T Consensus 76 --~-i-i~e~--------~~~gta~ai~~a~~~~~--~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~ 141 (336)
T 2x65_A 76 --N-I-IAEP--------MKKNTAPACFIGTKLAD--DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIV 141 (336)
T ss_dssp --G-E-EEES--------SCCCHHHHHHHHHTTSC--TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEEC
T ss_pred --e-E-EeCC--------CCCCcHHHHHHHHHhhC--CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEee
Confidence 1 1 2221 12799999998876542 2467999999997643 444 445557665677777776
Q ss_pred ecCcccCcceEEEEeCCC-----CCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhh
Q 010006 241 PMDEKRATAFGLMKIDEE-----GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD 315 (520)
Q Consensus 241 ~~~~~~~~~~g~v~~d~~-----g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~ 315 (520)
+.. +.+.||++..|++ ++|..|.|||.......+ .....|++++|+|+|++++|.+.+++
T Consensus 142 p~~--~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~a~~~-------------~~~g~y~~n~Giy~~~~~~ll~~l~~ 206 (336)
T 2x65_A 142 PTR--PETGYGYIEIGEELEEGVHKVAQFREKPDLETAKKF-------------VESGRFLWNSGMFLWKAREFIEEVKV 206 (336)
T ss_dssp CCS--CCSSSEEEEEEEEEETTEEEEEEEEESCCHHHHHHH-------------HHHTCEEEEEEEEEEEHHHHHHHHHH
T ss_pred ccc--CCCCceEEEECCccCCCccEEEEEEECCChHHHHHH-------------HhcCCeEEEeeeEEEEHHHHHHHHHH
Confidence 643 3578999988764 799999999987543211 11234789999999999988545443
Q ss_pred hCCC----------CC-CccccchHh---------hhhCCceEEEEEecceEEeCCCHHHHHHh
Q 010006 316 KFPG----------AN-DFGSEVIPG---------ATSIGMRVQAYLYDGYWEDIGTIEAFYNA 359 (520)
Q Consensus 316 ~~~~----------~~-~~~~dil~~---------li~~~~~v~a~~~~g~w~dI~t~~dy~~A 359 (520)
..+. .. +|..++++. +++.+.++++++++++|.||||+++|+++
T Consensus 207 ~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 207 CEPSIYENLKDVDPRNFEELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp HCHHHHHHHTTCCTTCHHHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred HCHHHHHHHHHhhhhhhhHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 3221 01 233555664 45556899999999999999999999999
No 21
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.95 E-value=3.3e-27 Score=241.39 Aligned_cols=235 Identities=22% Similarity=0.293 Sum_probs=168.7
Q ss_pred ceEEEEEeCCCCCCCCccc-cCCCccceecCCccchhHHHHHHhHhC-CCCeEEEEeccCh-hHHHHHHHHhhhccCCCC
Q 010006 89 SVLGIILGGGAGTRLYPLT-KKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGY 165 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT-~~~pK~Llpv~G~~plI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~ 165 (520)
+|.+||||||.||||+||| ..+||+|+|++|.+|||+|+++++.++ |+++|+|+++++. +.+.+++..
T Consensus 2 ~m~~VILAgG~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~--------- 72 (337)
T 2cu2_A 2 KTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG--------- 72 (337)
T ss_dssp CEEEEEECCCCCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS---------
T ss_pred CeEEEEEcCCCcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc---------
Confidence 4899999999999999999 589999999998349999999999998 8999999998764 344444332
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhc-CcceEEEEeCceeccc--cHHHHHH----HHHhcCCcEEEE
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH-NVLEFLVLAGDHLYRM--DYERFIQ----AHRETDADITVA 238 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~-~~~~~Lvl~gD~l~~~--dl~~ll~----~h~~~~a~~tl~ 238 (520)
..+ ++.+ +..||+.++..+.. +... .++.+++++||+++.. .+..+++ .|++ ++.+|+.
T Consensus 73 ---~~~-i~e~--------~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~ 138 (337)
T 2cu2_A 73 ---IRL-LLEP--------LGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALG 138 (337)
T ss_dssp ---SEE-EEES--------SCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEE
T ss_pred ---Cce-EecC--------CCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEe
Confidence 111 2221 13789999998877 5421 3578999999997653 3554444 3433 5667777
Q ss_pred EEecCcccCcceEEEEeCCC----CCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHh
Q 010006 239 ALPMDEKRATAFGLMKIDEE----GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLR 314 (520)
Q Consensus 239 ~~~~~~~~~~~~g~v~~d~~----g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~ 314 (520)
+.+.. +++.||++..+++ ++|..|.|||.......+. ... +++++|+|+|++++|.+.++
T Consensus 139 i~p~~--~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~a~~~~-------------~~g-~~~n~Giy~f~~~~ll~~l~ 202 (337)
T 2cu2_A 139 LRPTR--PETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYI-------------RKG-YVWNGGVFAFAPATMAELFR 202 (337)
T ss_dssp ECCSS--CCSSSCEEEEEEEETTEEEEEEEECCCCHHHHHHHH-------------HTT-CEEEEEEEEECHHHHHHHHH
T ss_pred eccCC--CCCCceEEEECCcccccCeEEEEEeCCChHHHHHHh-------------hcC-CEEEEEEEEEeHHHHHHHHH
Confidence 76643 4578999988765 7999999999865432210 112 79999999999998854555
Q ss_pred hhCCCC---------CCccccchHh---------hhhCCceEEEEEecceEEeCCCHHHHHHhhhh
Q 010006 315 DKFPGA---------NDFGSEVIPG---------ATSIGMRVQAYLYDGYWEDIGTIEAFYNANLG 362 (520)
Q Consensus 315 ~~~~~~---------~~~~~dil~~---------li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~ 362 (520)
+..+.. +....+.++. +++.+.++++++++++|.||||+++|+++...
T Consensus 203 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~~~ 268 (337)
T 2cu2_A 203 RHLPSHHEALERLLAGASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFSQ 268 (337)
T ss_dssp HHCHHHHHHHHHHHTTCCHHHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHHTS
T ss_pred HHCHHHHHHHHHHhcCCcHHHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHhhc
Confidence 433210 0001233443 45557899999999999999999999998653
No 22
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.94 E-value=1.7e-26 Score=227.14 Aligned_cols=219 Identities=13% Similarity=0.177 Sum_probs=158.9
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
+|.|||||||.|+||+|+|..+||+|+|++|+ |||+|+++++.++|+++|+|++++..+++.+++.. +.
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~l~~i~gk-pli~~~l~~l~~~g~~~i~vv~~~~~~~i~~~~~~-~~--------- 93 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKALVQVNQK-PLIEYQIEFLKEKGINDIIIIVGYLKEQFDYLKEK-YG--------- 93 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGGGCEETTE-EHHHHHHHHHHHTTCCCEEEEECTTGGGGTHHHHH-HC---------
T ss_pred CceEEEECCCCcccCCcccCCCCCEEeeECCE-EHHHHHHHHHHHCCCCeEEEEeCCcHHHHHHHHHh-CC---------
Confidence 58999999999999999999999999999987 99999999999999999999999887777544322 21
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCcEEEEEEecCcccC
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITVAALPMDEKRA 247 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~~tl~~~~~~~~~~ 247 (520)
+.++...+ . ...|++++++.++..++ ++++++||+++..+ +..++ +.++.+++ ...+ +.
T Consensus 94 --~~iv~~~~--~---~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~~~~-~~ 153 (254)
T 1jyk_A 94 --VRLVFNDK--Y---ADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRSTYFSV---YRED-CT 153 (254)
T ss_dssp --CEEEECTT--T---TTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEEEEEC---EESS-CS
T ss_pred --cEEEECCC--c---cCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCceEEE---Eccc-CC
Confidence 23332211 1 12689999998876653 48999999976555 33322 22222222 2221 22
Q ss_pred cceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHH---HHHhhhCCC---CC
Q 010006 248 TAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVML---NLLRDKFPG---AN 321 (520)
Q Consensus 248 ~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~---~ll~~~~~~---~~ 321 (520)
..|+++ +|++|+|+.|.|++.. .++++|+|+|+++.+. +++++..+. ..
T Consensus 154 ~~~~v~-~d~~g~v~~~~e~~~~------------------------~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e 208 (254)
T 1jyk_A 154 NEWFLV-YGDDYKVQDIIVDSKA------------------------GRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVD 208 (254)
T ss_dssp SCCEEE-ECTTCBEEEEECCCSS------------------------EEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCeEEE-ECCCCeEEEEEECCCC------------------------CcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccc
Confidence 368755 7888999999987531 3789999999987443 334332221 23
Q ss_pred CccccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhcc
Q 010006 322 DFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 322 ~~~~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~l 364 (520)
.+.++++..+.+ +.+++++.++ ++|.+|||++||.++++.+.
T Consensus 209 ~~~~d~~~~l~~-~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~ 251 (254)
T 1jyk_A 209 LYWDNMVKDNIK-ELDVYVEELEGNSIYEIDSVQDYRKLEEILK 251 (254)
T ss_dssp CCTTHHHHTTGG-GCCEEEEECCTTSEEECCSHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHh-hCCeEEEEecCCeEEEcCCHHHHHHHHHHhh
Confidence 345777777766 7899999998 79999999999999998764
No 23
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.93 E-value=1.9e-25 Score=219.33 Aligned_cols=239 Identities=15% Similarity=0.183 Sum_probs=171.6
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
++.|||||||.|||| | ||+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 2 ~~~aiIlA~G~stRl-p-----~K~L~~i~Gk-Pli~~~l~~l~~~~~~~ivVv~~--~~~i~~~~~~-~g--------- 62 (252)
T 3oam_A 2 SFTVVIPARYQSTRL-P-----GKPLADIGGK-PMIQWVYEQAMQAGADRVIIATD--DERVEQAVQA-FG--------- 62 (252)
T ss_dssp CEEEEEECCCCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT---------
T ss_pred ceEEEEecCcCCCCC-C-----CcceeeECCE-EHHHHHHHHHHhCCCCeEEEECC--HHHHHHHHHH-cC---------
Confidence 589999999999999 3 7999999997 99999999999999999999994 5778888765 11
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ec-cccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
++++... +++..||++ +..++..+.....+.|++++||. ++ ..++.++++.|.+.++++++++.++++
T Consensus 63 --~~v~~~~-----~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~-- 132 (252)
T 3oam_A 63 --GVVCMTS-----PNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIED-- 132 (252)
T ss_dssp --CEEEECC-----TTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECC--
T ss_pred --CEEEEcC-----CCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCC--
Confidence 2232221 123478877 56666555311257899999999 44 456999999998888889999888753
Q ss_pred Ccce-----EEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 010006 247 ATAF-----GLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (520)
Q Consensus 247 ~~~~-----g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (520)
+..| +.+..|++|+++.|.++|-........ ... ......++.++|+|+|++++|..+... .+...
T Consensus 133 ~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~-------~~~-~~~~~~~~~n~GiY~~~~~~l~~~~~~-~~~~~ 203 (252)
T 3oam_A 133 EAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFA-------KAD-KAIVQPLLRHIGIYAYRAGFINTYLDW-QPSQL 203 (252)
T ss_dssp HHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHH-------SSS-CCCCSCEEEEEEEEEEETTHHHHHHHS-CCCHH
T ss_pred HHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccc-------ccc-ccccccceEEEEEEEcCHHHHHHHHcC-CCCcc
Confidence 3455 888999999999999987543211000 000 000125689999999999999876542 22111
Q ss_pred CccccchHh--hhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhcccC
Q 010006 322 DFGSEVIPG--ATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITKK 366 (520)
Q Consensus 322 ~~~~dil~~--li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~l~~ 366 (520)
+. .|.|.. ++++|.+|.++..+ .+|.+|||++||.+++..+..+
T Consensus 204 e~-~E~le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 204 EK-IECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp HH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred cc-cchhHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 11 123332 34558999998775 4689999999999999876543
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.92 E-value=1.2e-23 Score=206.66 Aligned_cols=237 Identities=14% Similarity=0.113 Sum_probs=163.4
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
|++.|||||||.||||. ||+|+|++|+ |||+|+++.+.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 8 M~~~aIIlA~G~stRl~------~K~L~~i~Gk-Pli~~~l~~l~~~~i~~VvVvt~--~~~i~~~~~~-~g-------- 69 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRLP------GKALVDIAGK-PMIQHVYESAIKSGAEEVVIATD--DKRIRQVAED-FG-------- 69 (256)
T ss_dssp -CCEEEEECCCC---CT------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT--------
T ss_pred CCceEEEEcCCCCCCCC------CCCeeeECCc-hHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH-cC--------
Confidence 46899999999999995 7999999997 99999999999999999999985 5777777764 11
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhc-CCcEEEEEEecCc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMDE 244 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~a~~tl~~~~~~~ 244 (520)
++++.. .+++..|+++ ++.++..+.....+.|+++.||. ++. ..+.++++.+.+. ++++++++.++.+
T Consensus 70 ---~~v~~~-----~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~ 140 (256)
T 3tqd_A 70 ---AVVCMT-----SSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITE 140 (256)
T ss_dssp ---CEEEEC-----CTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCC
T ss_pred ---CeEEEe-----CCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCC
Confidence 223221 1234478865 77887777421357899999999 554 5699999999874 5577777777643
Q ss_pred ----ccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCC
Q 010006 245 ----KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (520)
Q Consensus 245 ----~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (520)
.++..++ |..|++|+++.|.++|.+....... .........+++...|+|.|++++|..+... .+..
T Consensus 141 ~~~~~~p~~vk-vv~d~~g~~l~fsr~pip~~r~~~~-------~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l-~~s~ 211 (256)
T 3tqd_A 141 VDELFNPHSTK-VVLNRRNYALYFSHAPIPWGRDTFS-------DKENLQLNGSHYRHVGIYAYRVGFLEEYLSW-DACP 211 (256)
T ss_dssp HHHHTCTTSCE-EEECTTSBEEEEESSCSSCCTTTTT-------CGGGCCCSSCCEEEEEEEEEEHHHHHHHHHS-CCCH
T ss_pred HHHhhCCCccE-EEECCCCEEeEEecCCCCCCCcccc-------cccccccCCcceEEEEEEEcCHHHHHHHHhC-CCCc
Confidence 2334454 4578899999999998743211000 0000001235789999999999999866432 2211
Q ss_pred CCcc-ccchHh--hhhCCceEEEEEecce-EEeCCCHHHHHHhhhh
Q 010006 321 NDFG-SEVIPG--ATSIGMRVQAYLYDGY-WEDIGTIEAFYNANLG 362 (520)
Q Consensus 321 ~~~~-~dil~~--li~~~~~v~a~~~~g~-w~dI~t~~dy~~An~~ 362 (520)
++ .+-|.+ +++.|++|+++..+++ |.+||||+||.+++..
T Consensus 212 --lE~~e~leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~~ 255 (256)
T 3tqd_A 212 --AEKMEALEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRAY 255 (256)
T ss_dssp --HHHHHTCTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHTT
T ss_pred --ccchhhhHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHHh
Confidence 22 123332 3566999999999875 8999999999998764
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.91 E-value=1.8e-23 Score=206.25 Aligned_cols=237 Identities=16% Similarity=0.169 Sum_probs=167.1
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
|++.|||||||.||||. +|+|+|++|+ |||+|+++++.++|+++|+|+++ .+.+.+++.+ +.
T Consensus 17 M~~~aIIlA~G~stRlp------~K~L~~i~Gk-Pmi~~~l~~l~~~~i~~IvV~t~--~~~i~~~~~~-~g-------- 78 (264)
T 3k8d_A 17 MSFVVIIPARYASTRLP------GKPLVDINGK-PMIVHVLERARESGAERIIVATD--HEDVARAVEA-AG-------- 78 (264)
T ss_dssp -CCEEEEECCSCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEES--CHHHHHHHHH-TT--------
T ss_pred CceEEEEEcCCCCCCCC------CcceeeECCe-EHHHHHHHHHHhCCCCEEEEECC--HHHHHHHHHH-cC--------
Confidence 56899999999999993 5999999997 99999999999999999999984 5677777764 11
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
++++.. .++|..|++. +..++..++....+.|+++.||. ++. ..+.++++.+.+.++++++++.++.+.
T Consensus 79 ---~~v~~~-----~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~ 149 (264)
T 3k8d_A 79 ---GEVCMT-----RADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNA 149 (264)
T ss_dssp ---CEEEEC-----CTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSH
T ss_pred ---CEEEEe-----cCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCH
Confidence 223221 1234478865 77777776422357899999999 444 569999999988888999999887642
Q ss_pred ----cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 010006 246 ----RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (520)
Q Consensus 246 ----~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (520)
++..+. +..|++|+++.|.+||..........+ +.....+++..+|+|.|++++|..+... .+ .
T Consensus 150 ~~~~~p~~vk-Vv~d~~g~~l~fsr~~ip~~r~~~~~~--------~~~~~~~~~~~~GiY~y~~~~l~~~~~~-~~--~ 217 (264)
T 3k8d_A 150 EEAFNPNAVK-VVLDAEGYALYFSRATIPWDRDRFAEG--------LETVGDNFLRHLGIYGYRAGFIRRYVNW-QP--S 217 (264)
T ss_dssp HHHTCTTSCE-EEECTTSBEEEEESSCCSCCHHHHHHC--------SSCCCSCCEEECSEEEEEHHHHHHHHHS-CC--C
T ss_pred HHccCCCceE-EEECCCCeEEEEecCCCCCCCcccccc--------ccccCCcceEEEEEEEECHHHHHHHHhC-CC--C
Confidence 223333 457889999999999863211100000 0000124689999999999999876542 11 1
Q ss_pred Ccc-ccchHh--hhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhc
Q 010006 322 DFG-SEVIPG--ATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 322 ~~~-~dil~~--li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~ 363 (520)
.++ .|.|.+ +++.|.+|+++... .+|.+||||+||..++..+
T Consensus 218 ~lE~~e~leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~~l 263 (264)
T 3k8d_A 218 PLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRAEM 263 (264)
T ss_dssp HHHHHHTCTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHh
Confidence 122 223332 34569999999765 4689999999999998643
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.89 E-value=1.2e-21 Score=192.10 Aligned_cols=237 Identities=13% Similarity=0.130 Sum_probs=165.5
Q ss_pred eEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHH-HHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPV-SNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l-~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
+.|||||+|.||||. +|+|+|++|+ |||+|++ +.+.++++++|+|+++ .+.+.+++.+ +.
T Consensus 2 ~~aiIlA~G~stR~~------~K~L~~i~Gk-Pli~~~i~~~~~~~~~~~vvVvt~--~~~i~~~~~~-~g--------- 62 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP------GKPLLLIHDR-PMILRVVDQAKKVEGFDDLCVATD--DERIAEICRA-EG--------- 62 (253)
T ss_dssp EEEEEECCSCCTTST------TGGGSEETTE-EHHHHHHHHHHTCTTCCEEEEEES--CHHHHHHHHT-TT---------
T ss_pred eEEEEEeCCCCCCCC------CCceeeECCe-EhHHHHHHHHHHhcCCCEEEEECC--HHHHHHHHHH-cC---------
Confidence 579999999999997 4999999997 9999999 9999999999999995 4667776654 11
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhc-CCcEEEEEEecCc-
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMDE- 244 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~a~~tl~~~~~~~- 244 (520)
++++... +++..|+ +++..++..+.....+.++++.||. +.+ ..+.++++.|.+. +..++.++.+..+
T Consensus 63 --~~v~~~~-----~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~ 134 (253)
T 4fcu_A 63 --VDVVLTS-----ADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHAL 134 (253)
T ss_dssp --CCEEECC-----TTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCH
T ss_pred --CeEEEeC-----CCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCH
Confidence 1222111 1223566 5788888777532357899999999 665 5699999999876 3444444444321
Q ss_pred ---ccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 010006 245 ---KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (520)
Q Consensus 245 ---~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (520)
.++..+. +..|++|+++.|.++|.......... ..+ .....++.+.|+|.|++++|.++.. .+ ..
T Consensus 135 ~~~~~p~~~k-vv~d~~g~~l~fsr~~ip~~r~~~~~-------~~~-~~~~~~~~~~GiY~f~~~~l~~~~~--~~-~~ 202 (253)
T 4fcu_A 135 DEFQRDSIVK-VVMSKQNEALYFSRATIPYDRDGAKR-------DEP-TLHTQAFRHLGLYAYRVSLLQEYVT--WE-MG 202 (253)
T ss_dssp HHHHCTTSCE-EEECTTSBEEEEESSCCSCCTTTSSS-------SSC-CCCSCCEEEEEEEEEEHHHHHHHTT--SC-CC
T ss_pred HHccCCCccE-EEECCCCeEEEecCCCCCCCCCcccc-------ccc-ccccceeEEEEEEEeCHHHHHHHHh--CC-CC
Confidence 3455554 46788999999999876432110000 000 0012468899999999999987653 12 22
Q ss_pred Ccc-ccchHhh--hhCCceEEEEEecce-EEeCCCHHHHHHhhhhccc
Q 010006 322 DFG-SEVIPGA--TSIGMRVQAYLYDGY-WEDIGTIEAFYNANLGITK 365 (520)
Q Consensus 322 ~~~-~dil~~l--i~~~~~v~a~~~~g~-w~dI~t~~dy~~An~~~l~ 365 (520)
.++ .|.|.++ ++.|++|+++..+++ |.+|||++||..++..+..
T Consensus 203 ~le~~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~ 250 (253)
T 4fcu_A 203 KLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVE 250 (253)
T ss_dssp HHHHHHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGG
T ss_pred cccchhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHh
Confidence 232 3445443 456999999999999 9999999999999987654
No 27
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.89 E-value=4.4e-22 Score=192.40 Aligned_cols=225 Identities=17% Similarity=0.206 Sum_probs=154.9
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
++.|||||||.|+||+ ||+|+|++|+ |||+|+++++.++ +++|+|++++ +++.+++.+.
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~i~g~-pli~~~l~~~~~~-~~~i~v~~~~--~~i~~~~~~~----------- 60 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK------EKPLKNLLGK-PLIRWVVEGLVKT-GERVILATDS--ERVKEVVEDL----------- 60 (234)
T ss_dssp CEEEEEECCSCCTTTT------TGGGCEETTE-EHHHHHHHHHHTT-TSCEEEEESC--HHHHHHHTTT-----------
T ss_pred ceEEEEEcCCCCCCCC------CCcceeECCE-EHHHHHHHHHHHh-CCEEEEECCh--HHHHHHHHhc-----------
Confidence 5899999999999997 8999999987 9999999999999 9999999976 6677666541
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecC-cc
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD-EK 245 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~-~~ 245 (520)
+.++... +++..|+++++ .++..+ ..+.+++++||+ +++ .++.++++.|.+.++.++++..... ..
T Consensus 61 --~~~~~~~-----~~~~~g~~~~~-~~~~~~---~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 129 (234)
T 2y6p_A 61 --CEVFLTP-----SDLPSGSDRVL-YVVRDL---DVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYE 129 (234)
T ss_dssp --SEEEECC-----TTCCSHHHHHH-HHHTTC---CCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGG
T ss_pred --eEEEECC-----cccccchHHHH-HHHHhC---CCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhc
Confidence 1222111 11236777755 344333 347899999999 877 6799999999877644444443211 11
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccc
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~ 325 (520)
++..+++ ..|++|+|..|.+||....... ...+.+.++|+|+|+++.|.++.+. .+...+. .
T Consensus 130 ~~~~~~~-~~~~~g~v~~~~e~~~~~~~~~---------------~~~~~~~~~giy~~~~~~l~~~~~~-~~~~~~~-~ 191 (234)
T 2y6p_A 130 RPEDVKV-VLDREGYALYFSRSPIPYFRKN---------------DTFYPLKHVGIYGFRKETLMEFGAM-PPSKLEQ-I 191 (234)
T ss_dssp CTTSCEE-EECTTSBEEEEESSCCSCCSSC---------------CSSCCEEEEEEEEEEHHHHHHHHHS-CCCHHHH-H
T ss_pred CCCceEE-EEcCCCCEeeeecCCCCccccc---------------ccceeeEEEEEEEcCHHHHHHHHhC-CCCccch-h
Confidence 2334443 4577899999999874310000 0002467999999999998866542 1111111 1
Q ss_pred cchH--hhhhCCceEEEEEecceEEeCCCHHHHHHhhhhc
Q 010006 326 EVIP--GATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 326 dil~--~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~ 363 (520)
|.+. .++..+.+++++..+++|.||+|++||..++..+
T Consensus 192 d~~~~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~~ 231 (234)
T 2y6p_A 192 EGLEQLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEKL 231 (234)
T ss_dssp HTCTHHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHHC
T ss_pred hHHHHHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHHH
Confidence 1122 2344488999999999999999999999998765
No 28
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.89 E-value=4.9e-22 Score=193.55 Aligned_cols=227 Identities=16% Similarity=0.277 Sum_probs=158.6
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCC-CeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNI-SKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi-~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
++.|||||||.|+|| | ||+|+|++|+ |||+|+++.+.++|+ ++|+|++++ +.+.+++.+ ++
T Consensus 2 ~~~aiIlA~G~~~R~-~-----~K~l~~i~g~-pli~~~i~~~~~~~~~~~ivvv~~~--~~i~~~~~~-~~-------- 63 (245)
T 1h7e_A 2 KAVIVIPARYGSSRL-P-----GKPLLDIVGK-PMIQHVYERALQVAGVAEVWVATDD--PRVEQAVQA-FG-------- 63 (245)
T ss_dssp CEEEEEECCSCCSSS-T-----TGGGCEETTE-EHHHHHHHHHHTCTTCCEEEEEESC--HHHHHHHHH-TT--------
T ss_pred CeEEEEEcCCcCCCC-C-----CCcccccCCc-hHHHHHHHHHHhCCCCCeEEEECCc--HHHHHHHHH-cC--------
Confidence 589999999999999 5 8999999987 999999999999996 999999975 667777665 11
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhc-CCcEEEEEEecCc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRET-DADITVAALPMDE 244 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~-~a~~tl~~~~~~~ 244 (520)
++++... +++..|+++.+ .++..++ .+.+++++||+ +.+ .++.++++.|.+. ++++++++.+.+.
T Consensus 64 ---~~~~~~~-----~~~~~g~~~~~-~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 131 (245)
T 1h7e_A 64 ---GKAIMTR-----NDHESGTDRLV-EVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISA 131 (245)
T ss_dssp ---CEEEECC-----SCCSSHHHHHH-HHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECH
T ss_pred ---CeEEeCC-----CccCCcHHHHH-HHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCH
Confidence 2333211 12336775544 4444442 47899999999 444 5699999999887 7788777766521
Q ss_pred c---cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCC
Q 010006 245 K---RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAN 321 (520)
Q Consensus 245 ~---~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~ 321 (520)
. ++.... +..+++|++..|.+++....... ...+.+.++|+|+|+++.|.++++ .+ ..
T Consensus 132 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~r~~---------------~~~~~~~~~g~y~~~~~~l~~~~~--~~-~~ 192 (245)
T 1h7e_A 132 AEAAEPSTVK-VVVNTRQDALYFSRSPIPYPRNA---------------EKARYLKHVGIYAYRRDVLQNYSQ--LP-ES 192 (245)
T ss_dssp HHHTCTTSCE-EEECTTCBEEEEESSCSSCCTTG---------------GGCCEEEEEEEEEEEHHHHHHGGG--SC-CC
T ss_pred HHhcCCCCcE-EEECCCCcEEEeecCCCCCCccc---------------ccCceeEEEEEEEcCHHHHHHHHh--CC-CC
Confidence 1 112222 23367789999987654311000 001246799999999998876552 22 22
Q ss_pred Cc-cccchHhhh--hCCceEEEEEecceEEeCCCHHHHHHhhhhcc
Q 010006 322 DF-GSEVIPGAT--SIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 322 ~~-~~dil~~li--~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l 364 (520)
++ ..|.++.+. +.|.+++++..+++|.||||++||..++..+.
T Consensus 193 ~~~~td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~ 238 (245)
T 1h7e_A 193 MPEQAESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMA 238 (245)
T ss_dssp HHHHHHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 22 245555543 55889999999999999999999999987553
No 29
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.87 E-value=1.8e-22 Score=195.21 Aligned_cols=214 Identities=16% Similarity=0.215 Sum_probs=135.8
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
|++|.|||||||.|+||+|+ ||+|+|++|+ |||+|+++++.++ +++|+|++ ++.+++.+++.+.+..
T Consensus 16 m~~~~~iIlA~G~g~R~~~~----~K~l~~i~g~-pli~~~l~~l~~~-~~~i~vv~-~~~~~~~~~~~~~~~~------ 82 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV----PKPLVRVGGC-EIILRTMKLLSPH-VSEFIIVA-SRYADDIDAFLKDKGF------ 82 (232)
T ss_dssp CCCEEEEEEECC------CC----CGGGCEETTE-EHHHHHHHHHGGG-EEEEEEEE-STTHHHHHHHHTTSCC------
T ss_pred cccceEEEECCcCcCcCCCC----CcEEeEECCE-EHHHHHHHHHHHh-CCEEEEEe-CChHHHHHHHHHhcCC------
Confidence 56799999999999999986 9999999987 9999999999999 99999999 7777887776442211
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
.+.++. ++.|..|++++++.++..++ +++++++||+.++.+ +.++++.+ . +++.......
T Consensus 83 ---~~~~v~------~~~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~~~~~l~~~~-----~-~~~~~~~~~~ 143 (232)
T 2xme_A 83 ---NYKIVR------HDRPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQFIEKAVRGE-----G-VIADREPRFV 143 (232)
T ss_dssp ---CEEEEE------CSCGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHHHHHHHTTCC-----E-EEEESSCSSS
T ss_pred ---cEEEEE------CCCCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHHHHHHHHhCC-----C-cEEEcccccc
Confidence 133432 12233799999999887664 579999999977655 45554421 1 2222111111
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccc
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~ 325 (520)
+..+++.+..+ +|+|..|.+++.. .+..++|+|+|++++|. .+++... ..++
T Consensus 144 ~~~~~~~v~~~-~g~v~~~~~~~~~-----------------------~~~~~~g~~~~~~~~~~-~l~~~~~-~g~~-- 195 (232)
T 2xme_A 144 DIGEATKIRVE-DGRVAKIGKDLRE-----------------------FDCVDTGFFVLDDSIFE-HAEKLRD-REEI-- 195 (232)
T ss_dssp CTTTSCEEEEE-TTEEEEEETTCSS-----------------------CSEEEEEEEEECTTHHH-HHGGGTT-SSCC--
T ss_pred CCCcceEEEEc-CCEEEEeecCCCC-----------------------cceEEEEEEEECHHHHH-HHHHHHh-cChh--
Confidence 23456666665 6899999887642 23678999999999987 4444332 1111
Q ss_pred cchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhh
Q 010006 326 EVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLG 362 (520)
Q Consensus 326 dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~ 362 (520)
-+..+++ ..++.++.++ ++|.||+||+||..++..
T Consensus 196 -~l~~ll~-~~~v~~~~~~~~~~~dI~tpeDl~~a~~~ 231 (232)
T 2xme_A 196 -PLSEIVK-LARLPVTYVDGELWMDVDTKEDVRRANRA 231 (232)
T ss_dssp -CHHHHHH-HHTCBEEECCSCCEEEEECC---------
T ss_pred -HHHHHHH-cCCEEEEEECCCCEEeCCCHHHHHHHHhh
Confidence 2444554 2356677775 689999999999887653
No 30
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.87 E-value=4.9e-21 Score=188.71 Aligned_cols=245 Identities=15% Similarity=0.152 Sum_probs=162.2
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
++.|||||||.|+||. +|+|+|++|+ |||+|+++++.++++++|+|++++ +++.+++.+ +.
T Consensus 2 ~~~aiIlA~G~g~R~~------~K~l~~~~gk-pli~~~l~~l~~~~~~~ivvv~~~--~~i~~~~~~-~~--------- 62 (262)
T 1vic_A 2 SFTVIIPARFASSRLP------GKPLADIKGK-PMIQHVFEKALQSGASRVIIATDN--ENVADVAKS-FG--------- 62 (262)
T ss_dssp CCEEEEECCCCCSSST------TGGGCEETTE-EHHHHHHHHHHHTTCSEEEEEESC--HHHHHHHHH-TT---------
T ss_pred CcEEEEEcCCCCCCCC------CCccccCCCe-EHHHHHHHHHHhCCCceEEEECCc--HHHHHHHHh-cC---------
Confidence 4789999999999995 3999999987 999999999999999999999974 557666654 11
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCcc-
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDEK- 245 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~- 245 (520)
+.++... +.+..|++ .+..++..+.....+.+++++||+ +.. .++.++++.+.+.++++++++.+..+.
T Consensus 63 --~~~~~~~-----~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (262)
T 1vic_A 63 --AEVCMTS-----VNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIHDAE 134 (262)
T ss_dssp --CEEEECC-----CSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECCCHH
T ss_pred --CEEEECC-----ccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecCCHH
Confidence 2232210 12335665 566666555422347899999999 444 569999999988888888888776531
Q ss_pred --cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 246 --RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 246 --~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
....+..+..|++|+++.|.+++......... ...... .......+..++|+|+|+++++..+... .+...+.
T Consensus 135 ~~~~~~~~~~~~~~~g~v~~f~~~~~~~~r~~~~---~~~~~~-~~~~p~~~~~~~giy~~~~~~l~~~~~~-~~~~~~~ 209 (262)
T 1vic_A 135 ELFNPNAVKVLTDKDGYVLYFSRSVIPYDRDQFM---NLQDVQ-KVQLSDAYLRHIGIYAYRAGFIKQYVQW-APTQLEN 209 (262)
T ss_dssp HHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHT---TCSCGG-GCCCCTTCEEEEEEEEEEHHHHHHHHHS-CCCHHHH
T ss_pred HhcCCCceEEEECCCCCEeeeecCCCCcCCcccc---cccccc-ccccccceEEEEEEEEeeHHHHHHHHhC-CCCchhh
Confidence 01234445557789999998876321000000 000000 0000012578999999999988765432 1111111
Q ss_pred cccchH--hhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhcccC
Q 010006 324 GSEVIP--GATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITKK 366 (520)
Q Consensus 324 ~~dil~--~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~l~~ 366 (520)
.+.+. .+++.|.+++++..+ ++|.||+|++||..++..+...
T Consensus 210 -~e~~~~~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~~ 254 (262)
T 1vic_A 210 -LEKLEQLRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAAN 254 (262)
T ss_dssp -HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred -hhhHHHHHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHhc
Confidence 11122 245458899999998 7999999999999998876543
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.86 E-value=5.7e-21 Score=186.65 Aligned_cols=228 Identities=15% Similarity=0.129 Sum_probs=156.3
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhH-HHHHHHHhhhccCCC
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSAS-LNRHLSRAYASNMGG 164 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~-i~~~l~~~~~~~~~~ 164 (520)
|+++.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.+++ +++|+|+++++... +.+.+.+ +.+.
T Consensus 1 M~~~~aIIlAaG~g~Rm~~--~~~pK~l~~l~Gk-pll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~-~~~~--- 73 (246)
T 3f1c_A 1 MSLIYAQILAGGKGTRMGN--VSMPKQFLPLNGK-PIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKK-YISD--- 73 (246)
T ss_dssp -CCEEEEEECC-----C-C--SSCCGGGSEETTE-EHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHH-HCCC---
T ss_pred CCccEEEEECCccccccCC--CCCCCeEEEECCe-eHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHH-hCCC---
Confidence 4568999999999999986 5689999999997 99999999999987 99999999876654 3334433 2211
Q ss_pred CcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhc----CcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEE
Q 010006 165 YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVA 238 (520)
Q Consensus 165 ~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~----~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~ 238 (520)
..+.++.. . .+..++++.++..+.+. ..+.+|++.||. +.. ..+.++++.+.+.++. +.
T Consensus 74 ----~~~~~~~~-----~----~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~--i~ 138 (246)
T 3f1c_A 74 ----DRIVVIEG-----G----EDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAV--DT 138 (246)
T ss_dssp ----TTEEEEEC-----C----SSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEE--EE
T ss_pred ----CCEEEECC-----C----CchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCE--EE
Confidence 12333321 1 45788999999888641 257899999999 554 5699999999886644 44
Q ss_pred EEecCcccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCC
Q 010006 239 ALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFP 318 (520)
Q Consensus 239 ~~~~~~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~ 318 (520)
+.+..+ .++..++++.|..+.+++.. +..-..++|+.+.|.+.++....
T Consensus 139 ~~~~~d------~i~~~~~~~~v~~~~~r~~l-------------------------~~~qtpq~f~~~~L~~a~~~~~~ 187 (246)
T 3f1c_A 139 VIEALD------TIVESSNHEVITDIPVRDHM-------------------------YQGQTPQSFNMKKVFNHYQNLTP 187 (246)
T ss_dssp EEECSS------CEEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTSCH
T ss_pred EEeccc------eEEEecCCCeEEEecChHHh-------------------------hhhcCCceeEHHHHHHHHHHHHH
Confidence 455432 23444445556555444321 22235679999988877764211
Q ss_pred CCCCccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccCC
Q 010006 319 GANDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKP 367 (520)
Q Consensus 319 ~~~~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~~ 367 (520)
....+.+|.+..+...|.++.++..+.+|++|+|++||..++..+..+.
T Consensus 188 ~~~~~~TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 188 EKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp HHHHHCCCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred cCCCccCcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 1122347777777777999999999999999999999999998776544
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.85 E-value=1.8e-20 Score=181.06 Aligned_cols=221 Identities=13% Similarity=0.063 Sum_probs=143.1
Q ss_pred eEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhC-CCCeEEEEeccCh-hHHHHHHHHhhhccCCCCcC
Q 010006 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNS-ASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~-gi~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~ 167 (520)
|.|||||||.|+||++ ..+||+|+|++|+ |||+|+++++.++ ++++|+|+++++. +.+.+++.+ +...+ .
T Consensus 3 ~~~iIlA~G~g~R~~~--~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~-~~~~~----~ 74 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI--SNLPKQFLELGDR-PILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDK-YLPLY----K 74 (236)
T ss_dssp EEEEEEEC-------------CGGGSEETTE-EHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHH-HCGGG----G
T ss_pred eEEEEeCCccccccCC--CCCCCeeeeeCCc-cHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHh-ccccc----c
Confidence 7899999999999997 6789999999987 9999999999998 5999999999877 556666544 22101 0
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhh--c--CcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEe
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEE--H--NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALP 241 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~--~--~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~ 241 (520)
..+.... .. .|+.++++.++..+.. . ..+.+++++||+ ++. .++.++++.|.+.++ ++++.+
T Consensus 75 -~~~~~~~-----~~----~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~ 142 (236)
T 2vsh_A 75 -ERIIITK-----GG----ADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVE 142 (236)
T ss_dssp -GGEEEEE-----CC----SSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEE
T ss_pred -CceEEEC-----CC----CchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEe
Confidence 0122111 11 5688999999987742 1 236789999999 655 569999999987654 244445
Q ss_pred cCcccCcceEEEEeCCCC-CEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCC
Q 010006 242 MDEKRATAFGLMKIDEEG-RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (520)
Q Consensus 242 ~~~~~~~~~g~v~~d~~g-~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (520)
..+ + +..+++| ++..+.+++.. ......|+|+++.+.++++.....
T Consensus 143 ~~~--~-----~~~~~~g~~~~~~~~~~~~-------------------------~~~~~p~~f~~~~l~~~~~~~~~~- 189 (236)
T 2vsh_A 143 AVD--T-----IVESTNGQFITDIPNRAHL-------------------------YQGQTPQTFRCKDFMDLYGSLSDE- 189 (236)
T ss_dssp CCS--C-----EEECSSSSBCCBCCCGGGE-------------------------EEEEEEEEEEHHHHHHHHHTCCHH-
T ss_pred ccc--c-----EEEeCCCCeeeeecChHHh-------------------------eeecCCcEecHHHHHHHHHHHHhc-
Confidence 432 2 2224567 77766654311 111248899999887776532211
Q ss_pred CCc-cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhc
Q 010006 321 NDF-GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 321 ~~~-~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~ 363 (520)
..+ ..+.+..+...+.++..+..+++|.||+|++||..++..+
T Consensus 190 g~~~~~~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~~ 233 (236)
T 2vsh_A 190 EKEILTDACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSMI 233 (236)
T ss_dssp HHHHCCSHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHHT
T ss_pred CCCcCCCHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHh
Confidence 111 2344455555578899999888999999999999988754
No 33
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.84 E-value=2.4e-21 Score=200.79 Aligned_cols=258 Identities=17% Similarity=0.171 Sum_probs=153.6
Q ss_pred EEEEeCceeccc--cHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEeCC--CCCEEEeeeCCChhhhhhcccccccc
Q 010006 208 FLVLAGDHLYRM--DYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDE--EGRIIEFSEKPKGEQLKAMKVDTTIL 283 (520)
Q Consensus 208 ~Lvl~gD~l~~~--dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~--~g~V~~~~ekp~~~~~~~~~~~~~~~ 283 (520)
=|+--+|++|++ +|.++++.|. +++.. .+++..||+..+|+ +++| .|.|||+....
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g----~~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~---------- 72 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG----NGATLLSGVEEIEEAKTAHI-TFLDNEKYAKH---------- 72 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES----CTTCEECEECCTTTCCTTEE-EECCSSSTHHH----------
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC----CCcceEEEEeccccCCCCeE-EEEeCchhhhh----------
Confidence 467789999997 8999999985 24443 33567899888874 4677 89999985421
Q ss_pred cCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccccchHhhhhCCceEEEEEecceEEeC--CCHHHHHHhhh
Q 010006 284 GLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSEVIPGATSIGMRVQAYLYDGYWEDI--GTIEAFYNANL 361 (520)
Q Consensus 284 ~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~dil~~li~~~~~v~a~~~~g~w~dI--~t~~dy~~An~ 361 (520)
..+.++|+|+|+++++.++. +| .++++ ++.+ .+.++|....+|++. .++
T Consensus 73 ----------~~~~~aGiyI~~~~~l~~~~--------~~-~~~~p-l~~~-~~~~a~~~~~~~~~~~i~~~-------- 123 (374)
T 2iu8_A 73 ----------LKSSEAGAIIISRTQFQKYR--------DL-NKNFL-ITSE-SPSLVFQKCLELFITPVDSG-------- 123 (374)
T ss_dssp ----------HHTCCCSEEEEEHHHHHTST--------TS-CSCEE-EESS-CHHHHHHHHHTTTSCCCCCS--------
T ss_pred ----------hhcCCcEEEEeChhHhhhcc--------cc-ccceE-EEeC-CHHHHHHHHHHHhccccccc--------
Confidence 02678999999998775221 12 45666 5552 244444444455553 221
Q ss_pred hcccCCCCCCccccCCCccccCCCcCCCceee-ccc------c-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc
Q 010006 362 GITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DAD------V-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE 431 (520)
Q Consensus 362 ~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~------i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~ 431 (520)
.... ....++++++.|...+.+.|++.+. ++. | .+++|+++|.|++ |.|. ++.|+.++.||++|.|.
T Consensus 124 --~~~i-~~~~~i~~~a~Ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~ 200 (374)
T 2iu8_A 124 --FPGI-HPTAVIHPTAIIEDHVCIEPYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQ 200 (374)
T ss_dssp --CCSB-CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSEEECTTCEEC
T ss_pred --cCcc-CCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEcccceECCCCEEC
Confidence 0111 2245566777777777777766664 222 2 1244444444444 4444 45555555555555555
Q ss_pred ccEEECCcccccc-----------ccccccccCCCcceeeCCCCEE----------------c-ceEECCCCEECCCcEE
Q 010006 432 DTLLMGADYYETD-----------ADRRFLAAKGSVPIGIGKNSHI----------------K-RAIIDKNARIGDNVKI 483 (520)
Q Consensus 432 ~~~i~~~~~~~~~-----------~~~~~~~~~~~~~~~Ig~~~~i----------------~-~~ii~~~~~Ig~~~~i 483 (520)
..+.++.+.|... ....+.||+++ .||++++| . .+.|++|++||++|.|
T Consensus 201 ~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v---~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~IG~~~~i 277 (374)
T 2iu8_A 201 PGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDV---EIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVEVGQHSMI 277 (374)
T ss_dssp TTCEEEEECSCEEEETTTEEEECCCCCCEEECTTC---EECTTCEEEECSSSCEEECTTCEECTTCEECTTCEECTTCEE
T ss_pred CCCEECcCCcccccccCCceeEeeeeccEEECCCC---EECCCcEEccCcccceeECCCcEECCccccCCccEECCCCEE
Confidence 5554443311110 01235556555 45555554 3 3677889999999999
Q ss_pred ecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCccC
Q 010006 484 VNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTII 520 (520)
Q Consensus 484 ~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gtvi 520 (520)
.+.+.+.+.+++|++|+|+.+. ++||++++|+++++|
T Consensus 278 ~~~~~v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V 319 (374)
T 2iu8_A 278 VAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGV 319 (374)
T ss_dssp CTTCEECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEE
T ss_pred ccCcccCCCcEECCCeEEecCcEECCCcccCCCcEEccCcee
Confidence 9999998888899999888873 678888888888764
No 34
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.82 E-value=4.4e-19 Score=170.90 Aligned_cols=217 Identities=14% Similarity=0.148 Sum_probs=136.9
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
++|.|||||||.|+||++ ..||+|+|++|+ |||+|+++.+..++ +++|+|+++++.+.+.+ +.+ +..
T Consensus 5 ~~~~aiIlA~G~g~R~~~---~~~K~l~~~~gk-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~~~------ 72 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFGA---DKPKQYVEIGSK-TVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQT-AFP------ 72 (231)
T ss_dssp CCEEEEEECC-------------CCSCCEETTE-EHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHH-HCT------
T ss_pred CceEEEEEcccccccCCC---CCCceEeEECCe-EHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHh-cCC------
Confidence 458999999999999996 579999999987 99999999999985 99999999987766665 543 111
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhc----CcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEE
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH----NVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAAL 240 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~----~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~ 240 (520)
..+.++. . ..|++++++.++..+... ..+.+++++||. +++ ..+.++++.+.+.+..+ +++.
T Consensus 73 --~~i~~~~-----~----~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~~-~~~~ 140 (231)
T 1vgw_A 73 --QVRVWKN-----G----GQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEGG-ILAV 140 (231)
T ss_dssp --TSEEECC-----C----CSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTCE-EEEE
T ss_pred --CceEEEc-----C----CCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCeE-EEEe
Confidence 1133321 1 168999999998877431 247899999998 555 45999999887654233 4444
Q ss_pred ecCcccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCC
Q 010006 241 PMDEKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGA 320 (520)
Q Consensus 241 ~~~~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~ 320 (520)
+..+ . . ..+++|++....++ .. .+...+.|+|+++.|.++++......
T Consensus 141 ~~~~--~--~---~~~~~g~i~~~~~~---~~----------------------~~~~~~p~~f~~~~l~~~~~~~~~~g 188 (231)
T 1vgw_A 141 PVAD--T--L---KRAESGQISATVDR---SG----------------------LWQAQTPQLFQAGLLHRALAAENLGG 188 (231)
T ss_dssp ECCS--C--E---EEESSSBEEEEECC---TT----------------------EEEEEEEEEEEHHHHHHHHHC----C
T ss_pred eccc--c--e---EEeCCCceEecCCh---HH----------------------heeeeCCcEecHHHHHHHHHHHhhcC
Confidence 4322 1 1 11234655543221 10 12233589999998877765322111
Q ss_pred CCccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhc
Q 010006 321 NDFGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 321 ~~~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~ 363 (520)
..+....+...+.++..+..++.|.||||++||..++..+
T Consensus 189 ---~~~~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 228 (231)
T 1vgw_A 189 ---ITDEASAVEKLGVRPLLIQGDARNLKLTQPQDAYIVRLLL 228 (231)
T ss_dssp ---CCSHHHHHHTTTCCCEEEECCTTCCCCCSHHHHHHHHHHC
T ss_pred ---CCcHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHHH
Confidence 1222333333367888888778899999999999987654
No 35
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.82 E-value=5.8e-20 Score=176.86 Aligned_cols=221 Identities=13% Similarity=0.086 Sum_probs=144.5
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhC-CCCeEEEEeccChhHHHHHHHHhhhccCCCC
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~-gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (520)
|++|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.++ ++++|+|+++++.+++.+++...+
T Consensus 2 ~~~~~aiIlAaG~g~R~~---~~~~K~l~~i~g~-pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~~~------- 70 (228)
T 2yc3_A 2 EKSVSVILLAGGQGKRMK---MSMPKQYIPLLGQ-PIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEESI------- 70 (228)
T ss_dssp TTCEEEEEECCCCC----------CGGGSEETTE-EHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTTTS-------
T ss_pred CcceEEEEECCccccccC---CCCCccEeEECCE-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHHhC-------
Confidence 567999999999999998 3579999999997 9999999999998 899999999988776665554321
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
+. .+.++. .+ .|..++++.++..++. ..+.++++.||. ++. .++..+++.|.+.++ ++++.+..
T Consensus 71 -~~-~v~~~~-----~~----~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~~~~ 136 (228)
T 2yc3_A 71 -DV-DLSFAI-----PG----KERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGVPAK 136 (228)
T ss_dssp -SS-EEEEEC-----CC----SSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEEECC
T ss_pred -CC-cEEEEC-----CC----CCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEEecc
Confidence 10 133321 11 5788999999877753 246788999997 555 569999999876553 44444432
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
+ . +..+|+++.+..+.+++. .+.....|+|+++.|.+.++....+. .+
T Consensus 137 ~--~----~~~~~~~~~v~~~~~~~~-------------------------~~~~~~~~~f~~~~l~~~~~~~~~~~-~~ 184 (228)
T 2yc3_A 137 A--T----IKEVNSDSLVVKTLDRKT-------------------------LWEMQTPQVIKPELLKKGFELVKSEG-LE 184 (228)
T ss_dssp S--C----CCCBCTTSCBCCCCSCCC-------------------------CEEEEEEEEECHHHHHHHHHHHHHHT-CC
T ss_pred c--e----EEEEcCCCceEEecCccc-------------------------eEEEeCCcEEEHHHHHHHHHHHHhcC-CC
Confidence 2 1 112344445543322111 12223489999887766654211111 22
Q ss_pred cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcc
Q 010006 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l 364 (520)
..+.+..+.+.+.++..+..+..|.+|+|++||..++..+.
T Consensus 185 ~~~~~~~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l~ 225 (228)
T 2yc3_A 185 VTDDVSIVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERILS 225 (228)
T ss_dssp CCSTTHHHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred cccHHHHHHHcCCceEEEeCCccccCcCCHHHHHHHHHHHh
Confidence 35666666666888876666668999999999999877553
No 36
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.82 E-value=3.2e-19 Score=170.88 Aligned_cols=215 Identities=17% Similarity=0.121 Sum_probs=151.4
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhH-HHHHHHHhhhccCCCCc
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSAS-LNRHLSRAYASNMGGYK 166 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~-i~~~l~~~~~~~~~~~~ 166 (520)
+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|+++++..+ +.+++..
T Consensus 2 ~~~~vIlA~G~g~R~~---~~~~K~l~~~~g~-pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~---------- 67 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLR---AGRPKAFVTLGGT-PLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGG---------- 67 (223)
T ss_dssp CEEEEEECCCCCGGGT---SSSCGGGSEETTE-EHHHHHHHHHHHHSCCSEEEEEECGGGHHHHHHHTCB----------
T ss_pred ceEEEEECCccCcccC---CCCCCeeeEECCe-EHHHHHHHHHhcCCCCCeEEEEEcccHHHHHHHHhcc----------
Confidence 5899999999999998 4689999999987 99999999999988 99999999877543 4433310
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCc
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDE 244 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~ 244 (520)
. .+.++.. . .+.+++++.++..++ ..+.++++.||+ +.+ .++.++++.+. .+.++++.+.+..+
T Consensus 68 -~-~v~~~~~-----~----~~~~~~i~~al~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~~d 133 (223)
T 2xwl_A 68 -E-DSVIVSG-----G----VDRTESVALALEAAG--DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAPAD 133 (223)
T ss_dssp -T-TEEEEEC-----C----SSHHHHHHHHHTTCT--TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECCSS
T ss_pred -C-CeEEEcC-----C----CCHHHHHHHHHHhcC--CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEeccc
Confidence 0 1333321 1 457889999987762 246789999999 555 46999999883 24466666665432
Q ss_pred ccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCcc
Q 010006 245 KRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFG 324 (520)
Q Consensus 245 ~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~ 324 (520)
+..+ .|++|++..+.|++.. ......|+|+++.+..+++... ..+.
T Consensus 134 --~~~~----~~~~g~~~~~~e~~~l-------------------------~~~~~p~~f~~~~l~~~~~~~~---~~~~ 179 (223)
T 2xwl_A 134 --TIKA----VDANGAVLGTPERAGL-------------------------RAVQTPQGFHADVLRRAYARAT---AGGV 179 (223)
T ss_dssp --CEEE----ECTTSBEEECCCGGGE-------------------------EEECSCEEEEHHHHHHHHTTCC---SCCC
T ss_pred --ceEE----EcCCCcEEeecChHHh-------------------------eeeeCCcccCHHHHHHHHHHhh---CCCC
Confidence 2222 3667888888765421 1123467899988876664321 2233
Q ss_pred ccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhccc
Q 010006 325 SEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITK 365 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~ 365 (520)
.+....+...+.++..+..+++|.||||++||..++..+..
T Consensus 180 ~~~~~~~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l~~ 220 (223)
T 2xwl_A 180 TDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVLAH 220 (223)
T ss_dssp CCHHHHHHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHHHH
T ss_pred ccHHHHHHHcCCCEEEEECCcccccccCHHHHHHHHHHHhh
Confidence 45555555556789999988899999999999999776543
No 37
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.81 E-value=8.7e-19 Score=168.78 Aligned_cols=217 Identities=14% Similarity=0.109 Sum_probs=146.6
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
|++.|||||||.|+||+ ||+|+|++|+ |||+|+++.+.+++ +++|+|+++ .+++.+++.+ +.
T Consensus 3 m~~~aiIlA~G~g~R~~------~K~l~~i~gk-pll~~~l~~~~~~~~~~~ivvv~~--~~~i~~~~~~-~~------- 65 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLP------LKNLRKMNGI-SLLGHTINAAISSKCFDRIIVSTD--GGLIAEEAKN-FG------- 65 (228)
T ss_dssp CEEEEEEECCSSCSSST------TTTTCEETTE-EHHHHHHHHHHHHCCCSEEEEEES--CHHHHHHHHH-TT-------
T ss_pred CceEEEEecCCCCCCCC------CcccceeCCc-CHHHHHHHHHHhCCCCCEEEEECC--CHHHHHHHHH-cC-------
Confidence 45789999999999998 8999999987 99999999999988 799999996 3556666544 11
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCc
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDE 244 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~ 244 (520)
++++.... .. ..+..|+.++++.++..+.. ..+.+++++||. +.. .++..+++.+.+.++++++.+.+..+
T Consensus 66 ----~~~~~~~~-~~-~~~~~g~~~sv~~~l~~~~~-~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 138 (228)
T 1ezi_A 66 ----VEVVLRPA-EL-ASDTASSISGVIHALETIGS-NSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEH 138 (228)
T ss_dssp ----CEEEECCC--------CHHHHHHHHHHHHHTC-CSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEECSS
T ss_pred ----CEEEeCch-HH-cCCCCChHHHHHHHHHHhCC-CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEecCC
Confidence 12221100 00 00126788999999988741 247899999999 444 56999999887777777777777543
Q ss_pred ccCcceEEEEeCCCCCEEEeeeCCCh-hhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 245 KRATAFGLMKIDEEGRIIEFSEKPKG-EQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 245 ~~~~~~g~v~~d~~g~V~~~~ekp~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
. +..+. .+|++|++..|.+.... .... .....+..++|+|+++++.+.+.++ +
T Consensus 139 ~-p~~~~--~~~~~g~~~~~~~~~~~~~~~~---------------~~~~~~~~~~giy~~~~~~l~~~~~--------~ 192 (228)
T 1ezi_A 139 H-PLKTL--LQINNGEYAPMRHLSDLEQPRQ---------------QLPQAFRPNGAIYINDTASLIANNC--------F 192 (228)
T ss_dssp C-TTSCE--EECC--CEEESSCHHHHTCCGG---------------GSCCEEEEEEEEEEEEHHHHHHHTS--------S
T ss_pred C-cceee--EEcCCCcEeeccccccccCCcc---------------cCchhheeeeEEEEEeHHHHhhCCc--------c
Confidence 1 22332 33777889888652100 0000 0001235678999999987764310 1
Q ss_pred cccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhcc
Q 010006 324 GSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~l 364 (520)
.+.++.++..+ .+|.||+|++||..++..+.
T Consensus 193 ----------~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l~ 224 (228)
T 1ezi_A 193 ----------FIAPTKLYIMSHQDSIDIDTELDLQQAENILN 224 (228)
T ss_dssp ----------CCSSCEEEECCTGGGCCCCSHHHHHHHHHHHC
T ss_pred ----------cCCceEEEEeCcccccCCCCHHHHHHHHHHHH
Confidence 15677777776 58999999999999877653
No 38
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.79 E-value=8e-20 Score=176.84 Aligned_cols=201 Identities=15% Similarity=0.149 Sum_probs=139.9
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
+|.|||||||. |||.+.+...||+|+|++|+ |||+|+++.+..+++ +|+|++. . +++.+++
T Consensus 2 ~~~~vIlAaG~-tRl~~r~~~~~K~l~~i~g~-pll~~~l~~l~~~~~-~ivvv~~-~-~~i~~~~-------------- 62 (232)
T 2dpw_A 2 RPSAIVLAGGK-EAWAERFGVGSKALVPYRGR-PMVEWVLEALYAAGL-SPVYVGE-N-PGLVPAP-------------- 62 (232)
T ss_dssp CCEEEEECCCB-CSGGGTTTCSBGGGSEETTE-ETHHHHHHHHHHTTC-EEEEESC-C-SSCSSCC--------------
T ss_pred ceeEEEECCCC-CccccccCCCCceeeEECCE-EHHHHHHHHHHhcCC-EEEEEeC-h-HHHhhhc--------------
Confidence 48999999999 88877666689999999987 999999999999998 8888754 3 3332211
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce--eccccHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH--LYRMDYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
.+.+ . +..|++++++.++..++ +.|++++||+ +...++.++++ | +.++++++...+.++ .
T Consensus 63 -~~~~--~--------~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~~~-~ 124 (232)
T 2dpw_A 63 -ALTL--P--------DRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPKEA-V 124 (232)
T ss_dssp -SEEE--C--------CCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEHHH-H
T ss_pred -CeEe--c--------CCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeeccc-h
Confidence 1333 1 12799999999987764 6899999999 34456999998 6 556777777665321 1
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhh---h--CCC--
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRD---K--FPG-- 319 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~---~--~~~-- 319 (520)
...|+.+ .++|+.+.||| .+++|+|+|+++++..+.+. . ...
T Consensus 125 ~~~~~~~----~~~v~~~~ek~---------------------------~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~P 173 (232)
T 2dpw_A 125 EARFPRT----KRTYARLREGT---------------------------FTGGNLLLLDKSLFRKALPLARRVVALRKRP 173 (232)
T ss_dssp HHHCTTC----CCCCEEETTEE---------------------------EEECSEEEEEHHHHTTTHHHHHHHHHTTTCH
T ss_pred hhhCCCc----ceeEEEEecCc---------------------------eeeeeEEEEcHHHHHHHHHHHHHHHHhccCH
Confidence 1233322 24566666553 35789999999987644321 0 000
Q ss_pred -----------------CCCccccchHhhhh-CCceEEEEEec--ceEEeCCCHHHHH
Q 010006 320 -----------------ANDFGSEVIPGATS-IGMRVQAYLYD--GYWEDIGTIEAFY 357 (520)
Q Consensus 320 -----------------~~~~~~dil~~li~-~~~~v~a~~~~--g~w~dI~t~~dy~ 357 (520)
......++++.+.. .|.++.++.++ +.|.|||||+||.
T Consensus 174 ~~~~~~~~~~~l~~~~~ge~~l~~~~~~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 174 LALARLVGWDVLLKLLLGRLSLAEVEARAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHHHHCHHHHHHHHHTCCCHHHHHHHHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHHHHCHHHHHHHHhccCCHHHHHHHHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 12233667766553 36789999884 5799999999984
No 39
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.77 E-value=7.2e-17 Score=170.24 Aligned_cols=340 Identities=11% Similarity=0.080 Sum_probs=200.4
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecC-CccchhHHHHHHhHhC----C--CCeEEEEeccChhHHHHHHHHhhhc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNS----N--ISKIYVLTQFNSASLNRHLSRAYAS 160 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~-G~~plI~~~l~~l~~~----g--i~~I~Iv~~~~~~~i~~~l~~~~~~ 160 (520)
.++.+||||||.||||+ ...||+|+|+. |+ |+|+++++++... | +.-+++...+..+.+.+||++...+
T Consensus 78 ~k~~vviLAGGlGTRLg---~~~PK~llpv~~gk-p~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~~~f 153 (469)
T 2icy_A 78 DKLVVLKLNGGLGTTMG---CTGPKSVIEVRDGL-TFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKYTNS 153 (469)
T ss_dssp TTEEEEEEECCBSGGGT---CCSBGGGSEEETTE-EHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGGTTS
T ss_pred ccceEEEEcCCccccCC---CCCCccccccCCCC-CHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhcccC
Confidence 57999999999999996 57999999998 76 9999999999876 5 5544444455688999999884333
Q ss_pred cCCCCcCCCeEEEeeccc-------------CC---C-CCCCccCcHHHHHHH-----HHHhhhcCcceEEEEeCceecc
Q 010006 161 NMGGYKNEGFVEVLAAQQ-------------SP---E-NPNWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYR 218 (520)
Q Consensus 161 ~~~~~~~~~~v~vl~~~~-------------~~---~-~~~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~ 218 (520)
++ . +.++.... .+ . ....+.|+++.+... ++.+.....++++|+++|.+..
T Consensus 154 G~------~-I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~ 226 (469)
T 2icy_A 154 NV------D-IHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGA 226 (469)
T ss_dssp SS------C-EEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTC
T ss_pred Cc------e-EEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCc
Confidence 32 1 22111000 00 0 001258999988764 2233223468999999999887
Q ss_pred ccHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEe-CCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCcee
Q 010006 219 MDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIA 297 (520)
Q Consensus 219 ~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~-d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 297 (520)
.....++..|.++++++++.+.+... ....||++.. |...+++++.|+|.......- + .....+.
T Consensus 227 ~~d~~ll~~~~~~~a~~t~~v~~k~~-~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k--~-----------~~~~~~~ 292 (469)
T 2icy_A 227 IVDLTILKHLIQNKNEYCMEVTPKTL-ADVKGGTLISYEGKVQLLEIAQVPDEHVNEFK--S-----------IEKFKIF 292 (469)
T ss_dssp CCCHHHHHHHHHHTCSEEEEEEECCT-TCCSSCEEEEETTEEEEECGGGSCGGGHHHHH--S-----------SSSCCEE
T ss_pred ccCHHHHHHHHHcCCCeeEEEEEecc-CCCceeEEEEECCEEEEEEEeccChhhhhhhc--c-----------cccccee
Confidence 54347899999999999999887643 1246888775 322347777788865321100 0 0112366
Q ss_pred eeeEEEEeHHHHHHHHhhhCCCC-----------------CCccccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHh
Q 010006 298 SMGIYVISKDVMLNLLRDKFPGA-----------------NDFGSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNA 359 (520)
Q Consensus 298 ~~GIyifs~~vl~~ll~~~~~~~-----------------~~~~~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~A 359 (520)
++|+|+|+++++.++++...... ..|..|+++. -.+..++.++ .+|..+.+..+++.+
T Consensus 293 N~g~y~~~~~~L~~i~~~~~~~lp~~v~~K~id~~~~~klE~~~~D~~~~----~~~~~~~~V~R~~F~PvKn~~dll~~ 368 (469)
T 2icy_A 293 NTNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRF----FDNAIGVNVPRSRFLPVKASSDLLLV 368 (469)
T ss_dssp EEEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGG----STTCEEEECCGGGCCBCCSHHHHHHH
T ss_pred eEEEEEEcHHHHHHHHhcccCCchhhccceecCCCceEeehHhhHHHHHh----cCCeEEEEechhHcCcCCCHHHHHHH
Confidence 99999999999998876421110 1111233322 2244555453 579999999999988
Q ss_pred hhhcccCCCCCCccccCCCccccCCCcCCCceeec--ccccc--eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEE
Q 010006 360 NLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLD--ADVTD--SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLL 435 (520)
Q Consensus 360 n~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~--~~i~~--~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i 435 (520)
...+..... .....++... ..+.|-..+.+ ..|.+ .-.-.-..|-+ ..+=.|--+++.|.++++.+.++
T Consensus 369 ~s~l~~~~~-g~~~~~~~~~----~~~~P~v~l~~~~~~v~~f~~rf~~~p~~~~--~~~l~v~gdv~fg~~v~l~G~v~ 441 (469)
T 2icy_A 369 QSDLYTLVD-GFVTRNKART----NPSNPSIELGPEFKKVATFLSRFKSIPSIVE--LDSLKVSGDVWFGSSIVLKGKVT 441 (469)
T ss_dssp HSTTEEEET-TEEEECTTCC----SSSCCEEEECGGGCSHHHHHHTBSSCCBCTT--EEEEEEESEEEECSSCEEEEEEE
T ss_pred HHHHHHHhc-CcEEecCccc----CCCCCeEEcChhhhhHHHHHHhcCCCccccc--CCeEEEEeeeEEcCCcEEEEEEE
Confidence 876322211 1111222210 11111111110 01111 00111111111 12334444578888888888777
Q ss_pred ECCccccccccccccccCCCcceeeCCCCEEcceEECCCCEE
Q 010006 436 MGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 477 (520)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 477 (520)
+.+. ..-++.|.+|+.+++.+|..|.+|
T Consensus 442 i~~~--------------~~~~~~ip~g~~l~~~~~~~~~~~ 469 (469)
T 2icy_A 442 VAAK--------------SGVKLEIPDRAVVENKNINGPEDL 469 (469)
T ss_dssp EECC--------------TTCEEEECTTCEEESCEECCC---
T ss_pred EEcC--------------CCCeeecCCCCEeecceeeccCCC
Confidence 6642 112467888888888888766654
No 40
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.77 E-value=9.2e-18 Score=162.42 Aligned_cols=222 Identities=12% Similarity=0.152 Sum_probs=144.6
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhHHHHHHHHhhhccCCCC
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (520)
|++|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|+++++.+.+.+ +.. +.
T Consensus 5 ~~~~~~iIlA~G~g~R~~---~~~~K~l~~i~g~-pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~-~~------ 72 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQ---TECPKQYLSIGNQ-TILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL-AN------ 72 (236)
T ss_dssp CCCEEEEEEECCCCGGGC---CSSCGGGSEETTE-EHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG-GG------
T ss_pred CCceeEEEECCcCccccC---CCCCcceeeECCE-EHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh-cC------
Confidence 467999999999999998 3579999999987 99999999999987 89999999877655544 322 11
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHHHHHhcCCcEEEEEEecC
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
...+.++.. + .|..++++.++..+. ..+.+++++||+ +++. .+..+++.+.+.++.. +.+.+..
T Consensus 73 --~~~v~~~~~-----~----~g~~~~i~~al~~~~--~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~~ 138 (236)
T 1i52_A 73 --HPQITVVDG-----G----DERADSVLAGLKAAG--DAQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPVR 138 (236)
T ss_dssp --CTTEEEEEC-----C----SSHHHHHHHHHHTST--TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEECC
T ss_pred --CCCEEEECC-----C----CCHHHHHHHHHHhcC--CCCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEecc
Confidence 111333321 1 478899999987764 247899999999 5554 4888988876654233 3333432
Q ss_pred cccCcceEEEEeCCC-CCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCC
Q 010006 244 EKRATAFGLMKIDEE-GRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGAND 322 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~-g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~ 322 (520)
+ . + ...+++ |++....+. . .-+...+.++|+.+.+.++++........
T Consensus 139 ~--~--~--~~~~~~~~~i~~~~~~---~----------------------~i~~~~~p~~f~~~~l~~~~~~~~~~g~~ 187 (236)
T 1i52_A 139 D--T--M--KRAEPGKNAIAHTVDR---N----------------------GLWHALTPQFFPRELLHDCLTRALNEGAT 187 (236)
T ss_dssp S--C--E--EEECTTSSSEEEEECC---T----------------------TCEEEEEEEEEEHHHHHHHHHHHHHTTCC
T ss_pred c--c--E--EEEcCCCCceeeccCh---H----------------------hheeeeCCceecHHHHHHHHHHHHhcCCC
Confidence 1 1 1 112434 455432210 0 01222367788988776666532211111
Q ss_pred ccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcccC
Q 010006 323 FGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGITKK 366 (520)
Q Consensus 323 ~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l~~ 366 (520)
..+....+...+.++..+..++.|.||+||+||..++..+..+
T Consensus 188 -~td~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~~~ 230 (236)
T 1i52_A 188 -ITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRT 230 (236)
T ss_dssp -CCSHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHCC-
T ss_pred -cccHHHHHHHcCCCEEEEecCccccccCCHHHHHHHHHHHHHh
Confidence 2233333333467888888888899999999999998766443
No 41
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.73 E-value=2.6e-17 Score=158.74 Aligned_cols=216 Identities=13% Similarity=0.155 Sum_probs=136.4
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
+++.|||||||.|+||. +|+|+|++|+ |||+|+++.+.+++ +++|+|++ +.+++.+++.+ +.
T Consensus 2 ~~~~aiIlA~G~s~R~~------~K~l~~i~Gk-pli~~~i~~~~~~~~~~~ivv~~--~~~~i~~~~~~-~g------- 64 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIP------LKNIKRLAGV-PLIGWVLRAALDAGVFQSVWVST--DHDEIENVAKQ-FG------- 64 (229)
T ss_dssp CCEEEEEECCSCCSSSS------CTTTSEETTE-EHHHHHHHHHHHHTCCSEEEEEE--SCHHHHHHHHH-TT-------
T ss_pred CcEEEEEEcCCCCCCCC------CcccceECCE-EHHHHHHHHHHhCCCcCEEEEEC--ChHHHHHHHHH-cC-------
Confidence 46899999999999996 4999999997 99999999999988 69999998 45667777654 11
Q ss_pred CCCeEEEee-cccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecC
Q 010006 167 NEGFVEVLA-AQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 167 ~~~~v~vl~-~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
++++. ......+ ..+..++++.++..+. ..+.+++++||. +.+ .++.++++.|.+.+++.++.+.+.
T Consensus 65 ----~~~~~~~~~~~~~---~~~~~~~v~~al~~~~--~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~- 134 (229)
T 1qwj_A 65 ----AQVHRRSSETSKD---SSTSLDAIVEFLNYHN--EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRR- 134 (229)
T ss_dssp ----CEEEECCGGGSST---TCCHHHHHHHHHTTCT--TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEE-
T ss_pred ----CEEEeChhhhcCC---CCcHHHHHHHHHHhcC--CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeec-
Confidence 22222 1110011 1344588888887663 247899999999 554 569999999988777765554432
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
.++..+.+ .| + +..|.++.......+. .++ .....+..++|+|+|+++.| ++
T Consensus 135 -~~p~~~~v--~~--~-~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~n~giY~~~~~~l---~~--------- 186 (229)
T 1qwj_A 135 -HQFRWSEI--QK--G-VREVTEPLNLNPAKRP---------RRQ-DWDGELYENGSFYFAKRHLI---EM--------- 186 (229)
T ss_dssp -CCCEECCC--CS--S-TTCCCCBSSSBTTBCC---------CTT-TSCCEEEEEEEEEEEEHHHH---HT---------
T ss_pred -cChhHhhc--cc--c-cccccccccccccccc---------CCC-CCCceEEEeeEEEEEEHHHh---cc---------
Confidence 22333322 22 2 1112211100000000 000 00012467999999999877 11
Q ss_pred cccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhhhhccc
Q 010006 324 GSEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNANLGITK 365 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~l~ 365 (520)
.+. .+..+..+..+ ++|.||||++||..++..+..
T Consensus 187 ------~~~-~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 187 ------GYL-QGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ------TCS-SCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ------ccc-cCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 111 25566432555 689999999999999876543
No 42
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.72 E-value=2.7e-16 Score=151.70 Aligned_cols=213 Identities=16% Similarity=0.229 Sum_probs=138.2
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccChhHH-HHHHHHhhhccCCCC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNSASL-NRHLSRAYASNMGGY 165 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~~~i-~~~l~~~~~~~~~~~ 165 (520)
.+|.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|+++++.... .+++. +
T Consensus 12 ~~~~aiILAaG~s~Rm~---~~~~K~l~~i~Gk-pli~~~i~~l~~~~~~~~ivVv~~~~~~~~~~~~~~----~----- 78 (234)
T 1vpa_A 12 HMNVAILLAAGKGERMS---ENVPKQFLEIEGR-MLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVF----H----- 78 (234)
T ss_dssp CCEEEEEEECCCCGGGC---CSSCGGGCEETTE-ETTHHHHHHHHHCTTCSEEEEEECGGGHHHHHTTCC----C-----
T ss_pred ccCeEEEEcCcchhhcC---CCCCceEEEECCe-EHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHhc----c-----
Confidence 35899999999999998 3479999999987 99999999999988 899999998766443 22211 0
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHHHHHhcCCcEEEEEEecC
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
.. .+... . .+ .+..++++.++..+++...+.+++++||. +++. .+.++++.+.+.++ .+.+.+..
T Consensus 79 -~~-~~~~~---~--gg----~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~--~i~~~~~~ 145 (234)
T 1vpa_A 79 -EK-VLGIV---E--GG----DTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA--ATLALKNS 145 (234)
T ss_dssp -TT-EEEEE---E--CC----SSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE--EEEEEECC
T ss_pred -CC-ceEEe---C--CC----CcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC--EEEEEecC
Confidence 11 11111 0 00 23778899998877431235788889999 6554 58899998876542 33344432
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
+ . +...+++| + .+.++.. .+..-..++|+++.+.++++.. .+
T Consensus 146 ~-----~-~~~~~~~g-v-~~~~r~~-------------------------~~~~~~p~~f~~~~l~~~~~~~-----~~ 187 (234)
T 1vpa_A 146 D-----A-LVRVENDR-I-EYIPRKG-------------------------VYRILTPQAFSYEILKKAHENG-----GE 187 (234)
T ss_dssp S-----E-EEEEETTE-E-EEECCTT-------------------------EEEEEEEEEEEHHHHHHHHTTC-----CC
T ss_pred C-----c-EEEECCCC-c-ccCChhH-------------------------eeeecCCccccHHHHHHHHHhc-----CC
Confidence 1 1 22234556 5 5543210 0112234588998887776531 11
Q ss_pred cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcc
Q 010006 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l 364 (520)
..+....+...+.++..+..++.|.||||++||..++..+.
T Consensus 188 ~~~~~~~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 228 (234)
T 1vpa_A 188 WADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAR 228 (234)
T ss_dssp CSSSHHHHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHHh
Confidence 22333333334667887777778999999999999877554
No 43
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.72 E-value=5.3e-16 Score=164.52 Aligned_cols=334 Identities=15% Similarity=0.128 Sum_probs=195.5
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecC-CccchhHHHHHHhHhC----CCC-eEEEEec-cChhHHHHHHHHhhh
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNS----NIS-KIYVLTQ-FNSASLNRHLSRAYA 159 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~-G~~plI~~~l~~l~~~----gi~-~I~Iv~~-~~~~~i~~~l~~~~~ 159 (520)
..++.+||||||.||||+ ...||+|+||+ |+ |||+|+++.+... |+. .++|+++ +..+.+.++|++...
T Consensus 90 ~~k~avViLAGG~GTRmg---s~~PK~l~~V~~gk-~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~~~ 165 (488)
T 2i5k_A 90 LSKLAVLKLNGGLGTSMG---CVGPKSVIEVREGN-TFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKYSA 165 (488)
T ss_dssp GGGEEEEEECCCBSGGGT---CCSBSTTSCCBTTB-CHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGGCS
T ss_pred cCCceEEEEcCCCcccCC---CCCCccccccCCCC-cHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhccc
Confidence 357899999999999998 57899999998 76 9999999999876 532 3667666 788899999987322
Q ss_pred ccCCCCcCCCeEEEeecccC---------------CC---CC-CCccCcHHHHHHH-----HHHhhhcCcceEEEEeCce
Q 010006 160 SNMGGYKNEGFVEVLAAQQS---------------PE---NP-NWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDH 215 (520)
Q Consensus 160 ~~~~~~~~~~~v~vl~~~~~---------------~~---~~-~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~ 215 (520)
++ .. +.+ ..|. +. .. ..+.|+++++... ++.+.....++++|++||.
T Consensus 166 fg------~~-i~~--f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDn 236 (488)
T 2i5k_A 166 NR------IR-IRS--FNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDN 236 (488)
T ss_dssp SS------CE-EEE--ECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTB
T ss_pred cC------ce-EEE--EEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCc
Confidence 22 11 111 1121 00 01 1257999998733 3444333468999999999
Q ss_pred ecc-ccHHHHHHHHHhcCCcEEEEEEecCcccCc-ceEEEEeCCCC--CEEEeeeCCChhhhhhcccccccccCCchhhc
Q 010006 216 LYR-MDYERFIQAHRETDADITVAALPMDEKRAT-AFGLMKIDEEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAK 291 (520)
Q Consensus 216 l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~-~~g~v~~d~~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~ 291 (520)
|.. .|+. ++..|.+.++++++.+.+.++ +. .||.+..+ +| +|+++.+.+....... . ..
T Consensus 237 L~~~~d~~-~L~~~~~~~a~~t~~v~~~~~--p~~~yG~Iv~~-dG~~~iVE~~e~~~e~~~~~-~------------~~ 299 (488)
T 2i5k_A 237 LGATVDLK-ILNHMIETGAEYIMELTDKTR--ADVKGGTLISY-DGQVRLLEVAQVPKEHIDEF-K------------NI 299 (488)
T ss_dssp SSCCCCHH-HHHHHHHSCCSEEEEEEECCG--GGSSSCEEEEE-TTEEEEECGGGSCTTSHHHH-T------------CT
T ss_pred CCCcccHH-HHHHHHhcCCcEEEEEEEecC--CCCceeEEEEE-CCcEEEEEeccCCHHHHhhc-c------------cc
Confidence 776 5675 668888999999998887543 43 48887764 45 4555556665432210 0 00
Q ss_pred cCCceeeeeEEEEeHHHHHHHHhhhCCCC---------------------CCccccchHhhhhCCceEEEEEec-ceEEe
Q 010006 292 EMPYIASMGIYVISKDVMLNLLRDKFPGA---------------------NDFGSEVIPGATSIGMRVQAYLYD-GYWED 349 (520)
Q Consensus 292 ~~~~l~~~GIyifs~~vl~~ll~~~~~~~---------------------~~~~~dil~~li~~~~~v~a~~~~-g~w~d 349 (520)
..-...++|+|+|+.+.|.++++...... ..|..|+++.+ + +..++.++ ..+..
T Consensus 300 ~~~~~~Ntgi~~f~~~~L~~~l~~~~~~lp~~v~~K~i~~~~~~~~~~qlE~~~~d~~~~~-~---~~~~~~V~R~~F~P 375 (488)
T 2i5k_A 300 RKFTNFNTNNLWINLKAVKRLIESSNLEMEIIPNQKTITRDGHEINVLQLETACGAAIRHF-D---GAHGVVVPRSRFLP 375 (488)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHTTCCCCCCBCCEECCCC-----CEECCBCCGGGGGGGS-S---SCEEEEECGGGCCB
T ss_pred cccCEEEEEEEEEeHHHHHHHHhhccCCCcceecCccccCCCCCCceEEeeehhhhHHhhc-c---CceEEEeccccccc
Confidence 11236699999999999998887521110 11122333322 1 23334442 35778
Q ss_pred CCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCceeecc--cccc--eEECC-CcEEeeeEEeeeEECCCCEE
Q 010006 350 IGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKMLDA--DVTD--SVIGE-GCVIKNCKIHHSVVGLRSCI 424 (520)
Q Consensus 350 I~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~--~i~~--~~Ig~-g~~I~~~~i~~s~Ig~~~~I 424 (520)
+.+..+++.+...+.... ....+.++.. ..+.|-..+.+. ++.+ .-+.. ...+.. .+=.|--+++.
T Consensus 376 vKn~~~ll~~~~~~~~~~-~g~~~~~~~~-----~e~~P~v~~~~~~~~~~~~~~rf~~~p~i~~~---~~l~v~Gdv~f 446 (488)
T 2i5k_A 376 VKTCSDLLLVKSDLFRLE-HGSLKLDPSR-----FGPNPLIKLGSHFKKVSGFNARIPHIPKIVEL---DHLTITGNVFL 446 (488)
T ss_dssp CCSHHHHHHHTSTTEEEE-TTEEEECTTC-----CSSCCEEEECGGGSSHHHHHHHCSSCCBCTTE---EEEEEESSEEE
T ss_pred ccCCccHHHHHHHHHHHh-cCcEeecCCc-----CCCCCeEEECCcccchhhHHhhcCCCcccccc---ceEEEEeeeEE
Confidence 888887766655432211 1111112211 111222222110 1111 00111 122221 12244445788
Q ss_pred CCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCCCEE
Q 010006 425 SEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 477 (520)
Q Consensus 425 g~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 477 (520)
|.++++.+.+++.++ +|. ++.|.+|++++|.+|..|.+|
T Consensus 447 g~~v~l~G~v~i~a~-------------~~~-~~~ip~g~~l~n~~~~~~~~~ 485 (488)
T 2i5k_A 447 GKDVTLRGTVIIVCS-------------DGH-KIDIPNGSILENVVVTGNLQI 485 (488)
T ss_dssp CTTCEEEEEEEEECC-------------TTC-CEEECTTCEEEEEEEEEEEEE
T ss_pred cCCcEEEEEEEEEcC-------------CCC-eEEeCCCCEEecceeeccccc
Confidence 888888888776541 122 467888888888877766665
No 44
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.71 E-value=1.6e-16 Score=148.96 Aligned_cols=188 Identities=14% Similarity=0.187 Sum_probs=127.5
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
++|.+||||||.|+||. .||+|+|++|+ |||+|+++++.++++++|+|+++++.+++.+++.+ + +
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pll~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~-~--------~ 68 (197)
T 2wee_A 4 TQITGVVLAAGRSNRLG-----TPKQLLPYRDT-TVLGATLDVARQAGFDQLILTLGGAASAVRAAMAL-D--------G 68 (197)
T ss_dssp SEEEEEEEECCCCTTTS-----SCGGGSEETTE-EHHHHHHHHHHHTTCSEEEEEECTTHHHHHHHSCC-T--------T
T ss_pred CceEEEEECCCCcccCC-----CCeEcCeeCCc-cHHHHHHHHHHhcCCCcEEEEeCCCHHHHHHHhcc-C--------C
Confidence 35889999999999995 79999999987 99999999999999999999999887777666543 1 1
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecc-ccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYR-MDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~-~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
+.++. ++.|..|++++++.++..+.. ..+.+++++||+ +++ ..+.++++. +.++++++...
T Consensus 69 ---~~~~~------~~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i~~~~~----- 131 (197)
T 2wee_A 69 ---TDVVV------VEDVERGCAASLRVALARVHP-RATGIVLMLGDQPQVAPATLRRIIDV--GPATEIMVCRY----- 131 (197)
T ss_dssp ---SEEEE------CC----CCHHHHHHHHTTSCT-TEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSEEEEEE-----
T ss_pred ---CEEEE------CCCcccCHHHHHHHHHHHhcc-cCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCEEEEec-----
Confidence 23332 122347999999999877631 247899999999 555 458888887 34444322110
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccc
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~ 325 (520)
| |+ +. .-++|+++.+..+.. .. .+
T Consensus 132 ----------~--g~-------~~------------------------------~P~~~~~~~l~~l~~--~~--~~--- 155 (197)
T 2wee_A 132 ----------A--DG-------VG------------------------------HPFWFSRTVFGELAR--LH--GD--- 155 (197)
T ss_dssp ----------T--TE-------EE------------------------------EEEEEEGGGHHHHHT--CC--ST---
T ss_pred ----------C--CC-------cC------------------------------CCEEECHHHHHHHHh--CC--CC---
Confidence 1 11 00 012778887775542 22 11
Q ss_pred cchHhhhhC-CceEEEEEec-ceEEeCCCHHHHHHhhhhc
Q 010006 326 EVIPGATSI-GMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 326 dil~~li~~-~~~v~a~~~~-g~w~dI~t~~dy~~An~~~ 363 (520)
.-+..+++. +.++..+.++ ++|.||+||+||..++..+
T Consensus 156 ~~~~~~l~~~~~~v~~v~~~~~~~~dIdtpeDl~~~~~~~ 195 (197)
T 2wee_A 156 KGVWKLVHSGRHPVRELAVDGCVPLDVDTWDDYRRLLESV 195 (197)
T ss_dssp THHHHHHHCTTSCEEEEECSSCCCCCCSSHHHHHHHHTC-
T ss_pred hhHHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHh
Confidence 123344442 4578877774 6899999999999887543
No 45
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.71 E-value=5.9e-16 Score=149.53 Aligned_cols=217 Identities=19% Similarity=0.187 Sum_probs=152.5
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCC-CCeEEEEeccCh-hHHHHHHHHhhhccCCCCc
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSN-ISKIYVLTQFNS-ASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~g-i~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~ 166 (520)
++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+++ +++|+|+++++. +.+.+++.. .
T Consensus 7 ~~~aIIlAaG~g~Rmg---~~~~K~l~~l~Gk-pll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~--~------- 73 (231)
T 3q80_A 7 EVVAIVPAAGSGERLA---VGVPKAFYQLDGQ-TLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH--R------- 73 (231)
T ss_dssp CEEEEEECCCCCTTTC---SSSCGGGCEETTE-EHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG--G-------
T ss_pred ceEEEEECCCCCccCC---CCCCceEEEECCe-EHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC--C-------
Confidence 4799999999999998 3579999999987 99999999999875 899999998765 444444432 1
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhc-CcceEEEEeCce-ecccc-HHHHHHHHHhcCCcEEEEEEecC
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEH-NVLEFLVLAGDH-LYRMD-YERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~-~~~~~Lvl~gD~-l~~~d-l~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
+.++.. . .+..++++.++..+.+. ..+.+|++.||. +.+.+ +.++++.+.+ +.++.+.+.++.
T Consensus 74 ----v~~v~g-----g----~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~~ 139 (231)
T 3q80_A 74 ----AMIVAG-----G----SNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPLS 139 (231)
T ss_dssp ----CEEEEC-----C----SSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECCS
T ss_pred ----eEEEcC-----C----CchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEecc
Confidence 223321 1 23468999999877531 246899999999 66654 8899998865 245666666654
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCC-CCC
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPG-AND 322 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~-~~~ 322 (520)
+ +.. ..+++|+|....+ .... +.+.+ .+.|+.+.|.+.++....+ ...
T Consensus 140 d--t~~----~~~~~g~v~~~~~---r~~l---------------------~~~qT-Pq~F~~~~L~~a~~~~~~~n~~~ 188 (231)
T 3q80_A 140 D--TIK----AVDANGVVLGTPE---RAGL---------------------RAVQT-PQGFTTDLLLRSYQRGSLDLPAA 188 (231)
T ss_dssp S--CEE----EECTTSBEEECCC---GGGE---------------------EEECS-CEEEEHHHHHHHHHHHTC-----
T ss_pred C--CEE----EEcCCCcEEEecc---hhhe---------------------EEEcC-CcEEEHHHHHHHHHHHHhhcCCC
Confidence 3 222 2466788776532 2211 13333 5899999998887654332 123
Q ss_pred ccccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhc
Q 010006 323 FGSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 323 ~~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~ 363 (520)
+.+|....+...|.++..+.-+..++.|+||+|+..++..+
T Consensus 189 ~~TD~~~~~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~l 229 (231)
T 3q80_A 189 EYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIV 229 (231)
T ss_dssp CCSSSHHHHHHTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCCcEEEEECCccccCcCCHHHHHHHHHHh
Confidence 34777777766799999888877899999999999887654
No 46
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.71 E-value=1.9e-16 Score=148.53 Aligned_cols=188 Identities=15% Similarity=0.180 Sum_probs=130.7
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
+++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+.++++++|+|+++++.+++.+++.+ + +
T Consensus 4 ~~~~~iIlA~G~~~R~g-----~~K~l~~~~g~-pli~~~l~~l~~~~~~~i~vv~~~~~~~~~~~~~~-~--------~ 68 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRLG-----TPKQLLPLGDT-TLLGATLAMARRCPFDQLIVTLGGAADEVLEKVEL-D--------G 68 (199)
T ss_dssp CCEEEEEEESSCCTTTT-----SCGGGCEETTE-EHHHHHHHHHHTSSCSEEEEEECTTHHHHHHHSCC-T--------T
T ss_pred CceEEEEECCCCCCCCC-----CCEEeCEeCcc-CHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHHhcc-C--------C
Confidence 35899999999999997 69999999987 99999999999999999999999877777666543 1 1
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCcee-c-cccHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDHL-Y-RMDYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~-~~dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
+.++.. +.+..|++++++.++..+.. ..+.+++++||+. . ..++.++++. +.++++++...
T Consensus 69 ---~~~~~~------~~~~~g~~~~i~~al~~~~~-~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~~~~~----- 131 (199)
T 2waw_A 69 ---LDIVLV------DDAGLGCSSSLKSALTWVDP-TAEGIVLMLGDQPGITASAVASLIAG--GRGATIAVCEY----- 131 (199)
T ss_dssp ---SEEEEC------CCCCTTCCCHHHHHHHTSCT-TCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEEEEEE-----
T ss_pred ---CEEEEC------CCcccCHHHHHHHHHHhhhc-cCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEEEEec-----
Confidence 233321 12337889999999987731 2478999999994 3 4558888887 44455432211
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccc
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~ 325 (520)
+ ++ + ..-++|+++.+..+.. ... +.
T Consensus 132 ----------~--g~-------~------------------------------~~P~~~~~~~l~~~~~--~~~--~~-- 156 (199)
T 2waw_A 132 ----------A--NG-------I------------------------------GHPFWVSRGVFGDLAE--LHG--DK-- 156 (199)
T ss_dssp ----------T--TE-------E------------------------------EEEEEEEGGGHHHHHT--CSS--TT--
T ss_pred ----------C--Cc-------c------------------------------cCCEEEcHHHHHHHHh--cCC--CH--
Confidence 1 11 0 0113778888876543 211 11
Q ss_pred cchHhhhh-CCceEEEEEec-ceEEeCCCHHHHHHhhhhc
Q 010006 326 EVIPGATS-IGMRVQAYLYD-GYWEDIGTIEAFYNANLGI 363 (520)
Q Consensus 326 dil~~li~-~~~~v~a~~~~-g~w~dI~t~~dy~~An~~~ 363 (520)
. +..+++ .+.++..+.++ +.|.||||++||..++..+
T Consensus 157 ~-~~~~l~~~~~~v~~~~~~~~~~~dIdtpeDl~~~~~~~ 195 (199)
T 2waw_A 157 G-VWRLIESGRHGVRRIRVDADVPLDVDTWDDYERLLASV 195 (199)
T ss_dssp C-HHHHHHSSSSCEEEEECSSCCCCCCSSHHHHHHHHHHH
T ss_pred H-HHHHHHhCcccEEEEEcCcccccCCCCHHHHHHHHHHH
Confidence 1 333443 24578888874 5899999999999887654
No 47
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=4e-17 Score=153.25 Aligned_cols=129 Identities=23% Similarity=0.336 Sum_probs=93.8
Q ss_pred eEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCCC
Q 010006 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (520)
|+|||||||.|+||+| .||+|+|++|+ |||+|+++.+.++++++|+|+++++.+++.+++.+.+.+. .
T Consensus 1 m~aiIlA~G~s~R~~~----~~K~l~~~~g~-pli~~~l~~l~~~~~~~v~vv~~~~~~~i~~~~~~~~~~~-------~ 68 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG----VEKPLIKLCGR-CLIDYVVSPLLKSKVNNIFIATSPNTPKTKEYINSAYKDY-------K 68 (196)
T ss_dssp CEEEEEC----CGGGG----SCGGGCEETTE-EHHHHHHHHHHSSSCCCEEEECCTTCHHHHHHHHHHTTTT-------T
T ss_pred CEEEEECCCCCCcCCC----CCccEEEECCE-EHHHHHHHHHHHCCCCEEEEEeCCChHHHHHHHHhhccCC-------C
Confidence 6899999999999997 89999999987 9999999999999999999999998889999988755331 1
Q ss_pred eEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ec-cccHHHHHHHHHh-----cCCcEEEEEEec
Q 010006 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LY-RMDYERFIQAHRE-----TDADITVAALPM 242 (520)
Q Consensus 170 ~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~-~~dl~~ll~~h~~-----~~a~~tl~~~~~ 242 (520)
.+.++... ..|++++++.++..+ .+.++++.||+ +. ...+.++++.|.+ .+.+..+.+.+.
T Consensus 69 ~~~~~~~~--------~~g~~~si~~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 69 NIVVIDTS--------GKGYIEDLNECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp EEEE----------------CCCCCTTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred CEEEEECC--------CCCcHHHHHHHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 13333211 267777888877655 47899999999 44 4569999999987 556666666664
No 48
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.69 E-value=2.2e-16 Score=152.98 Aligned_cols=207 Identities=12% Similarity=0.012 Sum_probs=128.2
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcC
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN 167 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~ 167 (520)
|++.|||||||.|+||++ . ||+|+|++|+ |||+|+++. ..++++|+|++++. +.+ +..
T Consensus 24 M~~~aiILAgG~s~Rm~~---~-~K~l~~i~gk-pli~~~l~~--~~~~~~ivvv~~~~---~~~-~~~----------- 81 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLGR---G-PKAFLQVGGR-TLLEWTLAA--FRDAAEVLVALPPG---AEP-PKG----------- 81 (236)
T ss_dssp CCCEEEEECCC----------C-CGGGCBCSSS-BHHHHHHHH--TTTCSEEEEEECTT---CCC-CTT-----------
T ss_pred CceEEEEEcCCCCccCCC---C-CCeEEEECCE-EHHHHHHHh--cCCCCeEEEEeCHH---HHH-hhc-----------
Confidence 346799999999999984 3 9999999987 999999999 67899999999751 111 111
Q ss_pred CCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHHHHHhcCCcEEEEEEecCcc
Q 010006 168 EGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMDEK 245 (520)
Q Consensus 168 ~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~a~~tl~~~~~~~~ 245 (520)
..+.++. .. .|..++++.++..++ .+.+++++||+ +++. .+..+++.+.+.+ ..+.+.+..+
T Consensus 82 -~~v~~~~-----~~----~~~~~~i~~al~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~~~- 145 (236)
T 2px7_A 82 -LGAVFLE-----GG----ATRQASVARLLEAAS---LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPVPD- 145 (236)
T ss_dssp -CSCEEEE-----CC----SSHHHHHHHHHHHCC---SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEECCS-
T ss_pred -CCcEEEe-----CC----CchHHHHHHHHHHcC---CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEecCC-
Confidence 0123321 11 467899999987764 46899999998 5554 4889998887654 3343444321
Q ss_pred cCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCccc
Q 010006 246 RATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGS 325 (520)
Q Consensus 246 ~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~ 325 (520)
... . .+ +|++..+.++.. . ......++|+++.|.++++....... ...
T Consensus 146 -~~~--~--~~-~G~v~~~~~~~~---~----------------------~~~~~~~~f~~~~l~~~~~~~~~~g~-~~~ 193 (236)
T 2px7_A 146 -TLM--A--PE-GEAYGRVVPREA---F----------------------RLVQTPQGFFTALLREAHAYARRKGL-EAS 193 (236)
T ss_dssp -EEE--E--EC-SSSCEEEECGGG---C----------------------EEECSCEEEEHHHHHHHHHHHHHHTC-CCS
T ss_pred -cEE--E--ec-CCeEEecCChHh---h----------------------ccccCCeEEcHHHHHHHHHHHHhcCC-Cch
Confidence 111 1 24 677776543210 0 11113567898877666543211111 122
Q ss_pred cchHhhhhCCceEEEEEecceEEeCCCHHHHHHhhhhcc
Q 010006 326 EVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 326 dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An~~~l 364 (520)
+....+...+.++..+..++.|.|||||+||..++..+.
T Consensus 194 d~~~ll~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l~ 232 (236)
T 2px7_A 194 DDAQLVQALGYPVALVEGEATAFKITHPQDLVLAEALAR 232 (236)
T ss_dssp SHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHT
T ss_pred hHHHHHHHcCCcEEEEECCccccCCCCHHHHHHHHHHHH
Confidence 333333334678888888889999999999999887654
No 49
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.62 E-value=1.5e-15 Score=143.03 Aligned_cols=184 Identities=18% Similarity=0.240 Sum_probs=115.4
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCC
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE 168 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~ 168 (520)
+|.+||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+++++.+.+.+++. .
T Consensus 2 ~~~~iIlAgG~g~Rmg-----~~K~l~~i~g~-pll~~~l~~l~~~---~ivvv~~~~~~~~~~~~~------------~ 60 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFG-----GDKLLAKIDNT-PIIMRTIRIYGDL---EKIIIVGKYVNEMLPLLM------------D 60 (197)
T ss_dssp CEEEEEECSCCTTCCC-----SSGGGSBSSSS-BHHHHHHHHTTTS---BCCEEECTTHHHHGGGCT------------T
T ss_pred ceEEEEECCcCcccCC-----CCeeeCEeCce-EHHHHHHHHHHhC---CEEEEECCCHHHHHHHhc------------C
Confidence 4899999999999998 39999999987 9999999999887 888999877555443322 0
Q ss_pred CeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHHHHHhcCCcEEEEEEecCccc
Q 010006 169 GFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMDEKR 246 (520)
Q Consensus 169 ~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~a~~tl~~~~~~~~~ 246 (520)
+ + ++. ++.|..|++++++.++..+.+ .+.+++++||+ +++. .+.++++.+ +.++++++...
T Consensus 61 ~-~-~v~------~~~~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~~~~~~------ 123 (197)
T 3d5n_A 61 Q-I-VIY------NPFWNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCKAVIPTH------ 123 (197)
T ss_dssp S-C-EEE------CTTGGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSEEEEEE------
T ss_pred C-E-EEE------CCCCCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCcEEEEEe------
Confidence 1 2 221 123447999999999988753 36899999999 5554 488888876 44444432221
Q ss_pred CcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCcccc
Q 010006 247 ATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDFGSE 326 (520)
Q Consensus 247 ~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~~~d 326 (520)
+ |+ +.. + .+|+++.+..+.. ..+. .+
T Consensus 124 ---------~--g~-------~~~-----------------------P-------~~~~~~~l~~l~~--l~g~----~~ 149 (197)
T 3d5n_A 124 ---------K--GE-------RGN-----------------------P-------VLISKSLFNEIEK--LRGD----VG 149 (197)
T ss_dssp ---------T--TE-------ECS-----------------------C-------EEEEHHHHHHHHH--CCTT----CC
T ss_pred ---------C--Cc-------ccC-----------------------C-------EEECHHHHHHHHc--cCCC----cc
Confidence 0 10 000 1 2788888876652 2221 12
Q ss_pred chHhhhhCCceEEEEEec--ceEEeCCCHHHHHHhhhhcc
Q 010006 327 VIPGATSIGMRVQAYLYD--GYWEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 327 il~~li~~~~~v~a~~~~--g~w~dI~t~~dy~~An~~~l 364 (520)
+-..+.+.+.++..+..+ +.|.||+||+||..++..+.
T Consensus 150 ~~~~l~~~~~~v~~v~~~~~~~~~dIdTpeDl~~~~~~~~ 189 (197)
T 3d5n_A 150 ARVILNKIKIEELCFIECSEGVLIDIDKKEDLMRLRDFHP 189 (197)
T ss_dssp THHHHTTSCGGGEEEEECCGGGTCCTTTC-----------
T ss_pred HHHHHHhCccCeEEEEcCCCCcccCCCCHHHHHHHHHhhc
Confidence 222222224567777765 47899999999988876554
No 50
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.61 E-value=7.8e-16 Score=145.45 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=112.4
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
|+++.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +++|+|+++++.. +++.
T Consensus 12 ~~~~~~iILA~G~g~Rmg-----~~K~ll~i~g~-pll~~~l~~l~~~-~~~i~vv~~~~~~---~~~~----------- 70 (201)
T 2e8b_A 12 SKVNTCYVLAGGKSKRFG-----EDKLLYEIKGK-KVIERVYETAKSV-FKEVYIVAKDREK---FSFL----------- 70 (201)
T ss_dssp CSCCEEEEEEESSCCCCS-----TTHHHHHHHHH-HHHHHHHHHHHTT-CSEEEEEESCSGG---GGGG-----------
T ss_pred ccCceEEEECCCCCccCC-----CCcccceECce-EHHHHHHHHHHHh-CCEEEEEeCcHHH---hhcC-----------
Confidence 345799999999999998 79999999987 9999999999988 9999999987654 1211
Q ss_pred CCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecccc-HHH-HHHHHHhcCCcEEEEEEecC
Q 010006 167 NEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMD-YER-FIQAHRETDADITVAALPMD 243 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~d-l~~-ll~~h~~~~a~~tl~~~~~~ 243 (520)
+ +.++.. +.+..|++++++.++..++ .+.+++++||+ +.+.+ +.. ++ + .++++.
T Consensus 71 ~---~~~v~~------~~~~~g~~~~i~~al~~~~---~~~~lv~~~D~P~i~~~~i~~~l~----~--~~~~v~----- 127 (201)
T 2e8b_A 71 N---APVVLD------EFEESASIIGLYTALKHAK---EENVFVLSGDLPLMKKETVLYVLE----N--FKEPVS----- 127 (201)
T ss_dssp T---CCEEEC------CCSSCCHHHHHHHHHHHCS---SSEEEEEETTCTTCCHHHHHHHHH----T--CCSSEE-----
T ss_pred C---ceEEec------CCCCCCcHHHHHHHHHHcC---CCCEEEEeCCcCcCCHHHHHHHHh----c--CCEEEE-----
Confidence 1 223221 1234799999999998774 47899999999 44544 666 65 1 222110
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
.. +|+ .....|+| |+++++..+.+ ........
T Consensus 128 ----------~~--~g~----------------------------------~~p~~giy-~~~~~~~~l~~-~~~~g~~~ 159 (201)
T 2e8b_A 128 ----------VA--KTE----------------------------------KLHTLVGV-YSKKLLEKIEE-RIKKGDYR 159 (201)
T ss_dssp ----------EE--ESS----------------------------------SEEEEEEE-EEGGGHHHHHH-HHHTTCCC
T ss_pred ----------ec--CCc----------------------------------eeeEEEEE-eChhHHHHHHH-HHHcCCch
Confidence 00 111 13457999 99987764432 11111111
Q ss_pred cccchHhhhhCCceEEEEEec--ceEE--eCCCHHHHHHhhhh
Q 010006 324 GSEVIPGATSIGMRVQAYLYD--GYWE--DIGTIEAFYNANLG 362 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~--g~w~--dI~t~~dy~~An~~ 362 (520)
..+++.. .++..+.++ +.|. |||||+||.+++..
T Consensus 160 ~~~~l~~-----~~~~~~~~~~~~~~~~~dintpedl~~~~~~ 197 (201)
T 2e8b_A 160 IWALLKD-----VGYNEVEIPEELRYTLLNMNTKEDLKRILAI 197 (201)
T ss_dssp HHHHHHH-----HCCEEEECCGGGGGGGCCSCCC---------
T ss_pred HHHHHHH-----CCeEEeccccccchhhcCCCCHHHHHHHHHH
Confidence 2343433 345566664 5799 99999999887654
No 51
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.57 E-value=1e-14 Score=150.16 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=129.8
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHh-CCCCeEEEEeccChhHHHHHHHHhhhccCCCC
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLN-SNISKIYVLTQFNSASLNRHLSRAYASNMGGY 165 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~-~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~ 165 (520)
||++.|||||||.|+||+ ...||+|+|++|+ |||+|+++.+.+ .++++|+|+++ +.+.+.+++.+
T Consensus 1 Mmki~aIILAaG~ssRmg---~~~pK~ll~l~Gk-PLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~~--------- 66 (371)
T 1w55_A 1 MSEMSLIMLAAGNSTRFN---TKVKKQFLRLGND-PLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTKN--------- 66 (371)
T ss_dssp -CCEEEEEECCSCCTTTC---SSSCGGGCEEBTE-EHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCSS---------
T ss_pred CCccEEEEECCCCCccCC---CCCCcceEEECCe-EHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhCC---------
Confidence 456899999999999998 3579999999987 999999999998 58999999998 44443322211
Q ss_pred cCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHHHHHhcCCcEEEEEEecC
Q 010006 166 KNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQAHRETDADITVAALPMD 243 (520)
Q Consensus 166 ~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~~h~~~~a~~tl~~~~~~ 243 (520)
+.++. .. .|..++++.++..++ .+.+++++||. +.+. .+.++++.+.+. +.++.+.+..
T Consensus 67 -----v~~v~-----~g----~g~~~sv~~aL~~l~---~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~~~ 127 (371)
T 1w55_A 67 -----YEFIE-----GG----DTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALKVA 127 (371)
T ss_dssp -----SEEEE-----CC----SSHHHHHHHHHTTCC---SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEECCC
T ss_pred -----CEEEe-----CC----CChHHHHHHHHHhcC---CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEEee
Confidence 22331 11 567899999987664 47899999999 5554 588898887654 3344444432
Q ss_pred cccCcceEEEEeCCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCceeeeeEEEEeHHHHHHHHhhhCCCCCCc
Q 010006 244 EKRATAFGLMKIDEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVISKDVMLNLLRDKFPGANDF 323 (520)
Q Consensus 244 ~~~~~~~g~v~~d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GIyifs~~vl~~ll~~~~~~~~~~ 323 (520)
+ . . .. ..+.+..... +....-+.|+.+.+.++++... .
T Consensus 128 d--~--v---k~--------v~~t~~r~~l----------------------~~~~~P~~f~~~~l~~~~~~~~----~- 165 (371)
T 1w55_A 128 D--T--T---LF--------DNEALQREKI----------------------KLIQTPQISKTKLLKKALDQNL----E- 165 (371)
T ss_dssp S--C--E---EE--------TTEEECGGGC----------------------CEECSCEEEEHHHHHHHTSSCC----C-
T ss_pred c--C--e---ee--------eeeecCccce----------------------eecCCcceecHHHHHHHHHhcc----c-
Confidence 1 1 0 00 0011111100 0001235788887776654311 1
Q ss_pred cccchHhhhhCCceEEEEEecceEEeCCCHHHHHHhh
Q 010006 324 GSEVIPGATSIGMRVQAYLYDGYWEDIGTIEAFYNAN 360 (520)
Q Consensus 324 ~~dil~~li~~~~~v~a~~~~g~w~dI~t~~dy~~An 360 (520)
..+....+...+.++..+..++.|.||+||+||..++
T Consensus 166 ~td~~~ll~~~g~~V~~v~~~~~~~dIdTpeDL~~Ae 202 (371)
T 1w55_A 166 FTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLD 202 (371)
T ss_dssp CSSHHHHHHTTTCCEEEEECCGGGCCCCSGGGGGGSC
T ss_pred ccCHHHHHHhCCCcEEEEECCccccCCCCHHHHHHHH
Confidence 2232333333467888888778899999999998887
No 52
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.56 E-value=2.7e-14 Score=134.85 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=84.0
Q ss_pred ccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCc
Q 010006 87 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK 166 (520)
Q Consensus 87 ~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~ 166 (520)
|++|.+||||||.|+||+ ..||+|+|++|+ |||+|+++.+.. ++++|+|+++++.+.+. + +
T Consensus 4 mm~~~~iILAgG~s~Rmg----~~~K~ll~i~G~-pli~~~l~~l~~-~~~~ivvv~~~~~~~~~----~---~------ 64 (201)
T 1e5k_A 4 MTTITGVVLAGGKARRMG----GVDKGLLELNGK-PLWQHVADALMT-QLSHVVVNANRHQEIYQ----A---S------ 64 (201)
T ss_dssp CCSEEEEEECCCCCSSSC----SSCGGGSEETTE-EHHHHHHHHHHH-HCSCEEEECSSSHHHHH----T---T------
T ss_pred CCcceEEEEcCCCCCcCC----CCCCceeeECce-eHHHHHHHHHHh-hCCEEEEEcCCcHHHHh----h---c------
Confidence 567999999999999998 379999999987 999999999985 58999999987754321 1 1
Q ss_pred CCCeEEEeecccCCCCCCCc-cCcHHHHHHHHHHhhhcCcceEEEEeCce-ecccc-HHHHHHH
Q 010006 167 NEGFVEVLAAQQSPENPNWF-QGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMD-YERFIQA 227 (520)
Q Consensus 167 ~~~~v~vl~~~~~~~~~~~~-~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~d-l~~ll~~ 227 (520)
+ +.++.. +.+. .|++++++.++..++ .+.+++++||+ +++.+ +..+++.
T Consensus 65 ~---~~~v~~------~~~~~~G~~~si~~~l~~~~---~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 65 G---LKVIED------SLADYPGPLAGMLSVMQQEA---GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp S---CCEECC------CTTCCCSHHHHHHHHHHHCC---SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred C---CeEEec------CCCCCCCHHHHHHHHHHhCC---CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 1 223221 1122 689999999998774 47899999999 55544 7888775
No 53
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.52 E-value=3.6e-13 Score=143.41 Aligned_cols=212 Identities=14% Similarity=0.174 Sum_probs=140.4
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceec---CCccchhHHHHHHhHh--------CC----CCeEEEEeccChhHHHH
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN--------SN----ISKIYVLTQFNSASLNR 152 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv---~G~~plI~~~l~~l~~--------~g----i~~I~Iv~~~~~~~i~~ 152 (520)
.+|.+||||||.||||+ ...||+|+|| .|+ |+|+++++.+.. .| +..+++...+..+.+.+
T Consensus 101 ~kvavViLAGG~GTRLg---~~~PK~l~pv~~~~gk-~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t~e~t~~ 176 (505)
T 1jv1_A 101 NKVAVLLLAGGQGTRLG---VAYPKGMYDVGLPSRK-TLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRTMESTKE 176 (505)
T ss_dssp TCEEEEEECCCCCCTTS---CSSCGGGCCCCCTTCC-CHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTTHHHHHH
T ss_pred CceEEEEEcCCccccCC---CCCCCccceeecCCCC-cHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCHHHHHH
Confidence 46999999999999996 5799999999 676 999999999876 36 66666666677899999
Q ss_pred HHHHhhhccCCC----CcCCCeEEEeecc-cC----CCC-CCCccCcHHHHHHHHH-----HhhhcCcceEEEEeCcee-
Q 010006 153 HLSRAYASNMGG----YKNEGFVEVLAAQ-QS----PEN-PNWFQGTADAVRQYLW-----LFEEHNVLEFLVLAGDHL- 216 (520)
Q Consensus 153 ~l~~~~~~~~~~----~~~~~~v~vl~~~-~~----~~~-~~~~~Gt~~al~~~~~-----~l~~~~~~~~Lvl~gD~l- 216 (520)
|+++...+++.. .+....+..+... .- +.. ...+.|+++.+..... .+.....++|+|+++|.+
T Consensus 177 ~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L 256 (505)
T 1jv1_A 177 FFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNIL 256 (505)
T ss_dssp HHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTT
T ss_pred HHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCccc
Confidence 998854443310 0010101111000 00 000 0114789888876542 222234589999999995
Q ss_pred ccccHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEeCC-CCCEEEeeeCCChhhhhhcccccccccCCchhhccCCc
Q 010006 217 YRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDE-EGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPY 295 (520)
Q Consensus 217 ~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~-~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
...+...++..|.++++++++.+.+.. .+...+|++..++ ..+|+++.|+|...... . ++. ......
T Consensus 257 ~~~~d~~~lg~~~~~~~~~~~~v~~k~-~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~---~-------~~~-g~~~~~ 324 (505)
T 1jv1_A 257 VKVADPRFIGFCIQKGADCGAKVVEKT-NPTEPVGVVCRVDGVYQVVEYSEISLATAQK---R-------SSD-GRLLFN 324 (505)
T ss_dssp CCTTCHHHHHHHHHTTCSEEEEEEECC-STTCSCCEEEEETTEEEEECGGGSCHHHHHC---B-------CTT-SSBSSC
T ss_pred cccchHHHHHHHHHcCCCEEEEEEEcc-CCccCcceEEEECCeEEEEEEeeCCHHHhhh---c-------ccc-cccccc
Confidence 777777899999999999998887632 2356789887742 23457777777643211 0 000 011235
Q ss_pred eeeeeEEEEeHHHHHHHHhh
Q 010006 296 IASMGIYVISKDVMLNLLRD 315 (520)
Q Consensus 296 l~~~GIyifs~~vl~~ll~~ 315 (520)
..++|+|+|+.++|.++.+.
T Consensus 325 ~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 325 AGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp EEEEEEEEEEHHHHHHHHHT
T ss_pred eeeEEEEEecHHHHHHHHHh
Confidence 78999999999999987653
No 54
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.52 E-value=6.8e-14 Score=139.27 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=82.4
Q ss_pred ccccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc-------------ccE
Q 010006 372 SFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTL 434 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~-------------~~~ 434 (520)
..+.|.+.|.+.+.+.+++.+. .+.| .++.||++|+|+. +.|. ++.||++|.|+++|.|. ...
T Consensus 23 ~~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~ 102 (283)
T 4eqy_A 23 SRIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLV 102 (283)
T ss_dssp CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEE
T ss_pred cccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEE
Confidence 3455555555555555555543 3334 5688888888887 7777 68888888888888883 223
Q ss_pred EECCcccccccc---------ccccccCCCcceeeCCCCEE-cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 435 LMGADYYETDAD---------RRFLAAKGSVPIGIGKNSHI-KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 435 i~~~~~~~~~~~---------~~~~~~~~~~~~~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
|.+++.....+. ..+.||+++ .|+.+++| ++|+|++++.|+.++.+.+...+++.++++.++.|..+
T Consensus 103 IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~---~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 179 (283)
T 4eqy_A 103 IGDRNTIREFTTIHTGTVQDAGVTTLGDDN---WIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQY 179 (283)
T ss_dssp ECSSCEECTTEEEECCCTTTTSEEEECSSC---EECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ECCCcccCcceeEccceecCCCceEECCCc---EECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCC
Confidence 333322221111 113444444 34444444 34555555555555555544555555555555555555
Q ss_pred eEEEcCCCEeCCCccC
Q 010006 505 IVTIIKDALIPSGTII 520 (520)
Q Consensus 505 ~v~Ig~~~~i~~gtvi 520 (520)
++||++++|++|++|
T Consensus 180 -v~Ig~~~vvg~~s~V 194 (283)
T 4eqy_A 180 -VRIGAHSMLGGASAL 194 (283)
T ss_dssp -CEECTTCEECTTCEE
T ss_pred -eEECCCcEECCCCeE
Confidence 778888888887764
No 55
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.52 E-value=9.3e-14 Score=136.46 Aligned_cols=142 Identities=18% Similarity=0.223 Sum_probs=89.0
Q ss_pred CccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEE-------------cccEE
Q 010006 371 FSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAII-------------EDTLL 435 (520)
Q Consensus 371 ~~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I-------------~~~~i 435 (520)
..++++.+.+..++.+.|++.+. .++.||++|+|++ +.|. ++.||++|.|+++|.| ...+.
T Consensus 6 ~a~I~~~a~ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~ 81 (259)
T 3hsq_A 6 TAIIDPKAELHESVEVGPYSIIE----GNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTV 81 (259)
T ss_dssp TCEECTTCEECTTCEECTTCEEC----SSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEE
T ss_pred CcEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEE
Confidence 35667777777777777777764 5678888888887 7777 5888888888888888 44444
Q ss_pred ECCc-cccccccccccccCCCc---ceeeCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----
Q 010006 436 MGAD-YYETDADRRFLAAKGSV---PIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI----- 505 (520)
Q Consensus 436 ~~~~-~~~~~~~~~~~~~~~~~---~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~----- 505 (520)
++++ ... .++.+..+.. .+.||+++.|. ++.|++++.||+++.|.+.+.+.++++++++++|+.+.
T Consensus 82 IG~~~~Ig----~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 157 (259)
T 3hsq_A 82 IGDHNIFR----EYSNIHKGTKEDSPTVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQF 157 (259)
T ss_dssp ECSSCEEC----TTCEEECCSBTTBCEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECSSEEECTT
T ss_pred ECCCcEEC----CCCEECCCccCCCcEEECCCcEEcCCcEECCCcEECCccEEcCCceECCccEECCCcEEeCCCEECCC
Confidence 4431 111 1111111110 24566666665 46666666666666666666666666666666666551
Q ss_pred EEEcCCCEeCCCccC
Q 010006 506 VTIIKDALIPSGTII 520 (520)
Q Consensus 506 v~Ig~~~~i~~gtvi 520 (520)
++||++++|++||+|
T Consensus 158 v~Ig~~~~Vg~~s~V 172 (259)
T 3hsq_A 158 CFVGDYSMVAGLAKV 172 (259)
T ss_dssp CEECTTCEECSSEEE
T ss_pred CEECCCCEECCCCEE
Confidence 556777777777653
No 56
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.52 E-value=1.9e-13 Score=140.42 Aligned_cols=52 Identities=13% Similarity=0.249 Sum_probs=32.3
Q ss_pred ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCcc
Q 010006 468 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 519 (520)
Q Consensus 468 ~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gtv 519 (520)
++.|++|++||++|.|.+.+.+...+++|++|.|+.+. +.||++++|+++++
T Consensus 239 ~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~ 295 (357)
T 4e79_A 239 LVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSM 295 (357)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCE
T ss_pred CcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCE
Confidence 34555666666677776666666667777777777662 33555555555543
No 57
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.51 E-value=2.4e-13 Score=138.79 Aligned_cols=169 Identities=17% Similarity=0.168 Sum_probs=83.1
Q ss_pred EeCCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCE
Q 010006 348 EDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSC 423 (520)
Q Consensus 348 ~dI~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~ 423 (520)
+-+.+|...+.....++.........++|.+.+...+.+.+++.+. ++.| .++.||++|+|++ |.|. ++.||++|.
T Consensus 74 ~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~ 153 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILDTTPQPAQNIAPSAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSR 153 (341)
T ss_dssp EECSCHHHHHHHHHHHHCCCCCSCCSBCTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EEeCCHHHHHHHHHHHhcccCCccCccCCCcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcE
Confidence 5557777655444444333212234556666666555555555554 2333 2355555555544 4442 444444444
Q ss_pred ECCCCEE------------cccEEECCcccc----------ccccccccccCCCcceeeCCCCEE---------------
Q 010006 424 ISEGAII------------EDTLLMGADYYE----------TDADRRFLAAKGSVPIGIGKNSHI--------------- 466 (520)
Q Consensus 424 Ig~~~~I------------~~~~i~~~~~~~----------~~~~~~~~~~~~~~~~~Ig~~~~i--------------- 466 (520)
|+.+++| .....++++.|. .....++.||+++ .||+++.|
T Consensus 154 I~~~~~I~~~~~IG~~~~I~~g~~I~~~~fg~~~~~~~~~~i~~~g~v~IGd~v---~Ig~~~~I~~~~~~~~~Ig~~~~ 230 (341)
T 3eh0_A 154 LWANVTIYHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRV---EIGACTTIDRGALDDTIIGNGVI 230 (341)
T ss_dssp ECSSCEECTTCEECSSCEECTTCEEEECCSCEEEETTEEEECCCCCCEEECSSC---EECTTCEEECCSSSCEEECTTCE
T ss_pred ECCCcEECCCCEECCccEEcCCcEECCccccccccCCccccccccCcEEECCCc---EECCccEeeccccCceEeccceE
Confidence 4333333 333322221110 0001234555554 44444444
Q ss_pred -c-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCcc
Q 010006 467 -K-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 519 (520)
Q Consensus 467 -~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gtv 519 (520)
. ++.|+++++||++|.|...+.+....++|++|.|+.+. +.||++++|+++++
T Consensus 231 I~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~ 290 (341)
T 3eh0_A 231 IDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGM 290 (341)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTTCE
T ss_pred ECCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeCCE
Confidence 3 34555566666666666666666666666666666652 45666666666654
No 58
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.51 E-value=1.1e-13 Score=136.35 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=83.4
Q ss_pred CccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc--------------ccE
Q 010006 371 FSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE--------------DTL 434 (520)
Q Consensus 371 ~~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~--------------~~~ 434 (520)
..++++.+.|...+.+.|++.+. .++.||++|+|++ +.|. ++.||++|.|++++.|. ...
T Consensus 10 ~a~I~~~a~Ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~ 85 (266)
T 3r0s_A 10 SAVIEEGAQLGDDVVIEAYAYVS----KDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVV 85 (266)
T ss_dssp TCEECTTCEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEE
T ss_pred CCEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEE
Confidence 35667777777777777777764 5678888888887 7777 68888888888888884 333
Q ss_pred EECCcccccccc---------ccccccCCCcceeeCCCCEE-cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 435 LMGADYYETDAD---------RRFLAAKGSVPIGIGKNSHI-KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 435 i~~~~~~~~~~~---------~~~~~~~~~~~~~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
|.+++.....+. ..+.||+++ .|+.+++| +++.|++++.|+.++.+.+...+++.++++.++.|..+
T Consensus 86 IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~---~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~ 162 (266)
T 3r0s_A 86 IGKNATIREFATINSGTAKGDGFTRIGDNA---FIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQF 162 (266)
T ss_dssp ECTTCEECTTCEEECCCTTTTSEEEECTTC---EECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ECCCCEECCceEecCCcccCCccEEECCCc---eeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCC
Confidence 333322211111 113333333 33444444 24444444444444444444444444445555555555
Q ss_pred eEEEcCCCEeCCCccC
Q 010006 505 IVTIIKDALIPSGTII 520 (520)
Q Consensus 505 ~v~Ig~~~~i~~gtvi 520 (520)
++||++++|++|++|
T Consensus 163 -v~Ig~~a~Vg~~s~V 177 (266)
T 3r0s_A 163 -VKVGEGCMIAGASAL 177 (266)
T ss_dssp -CEECTTCEECSSCBB
T ss_pred -cEECCCCEEccCCeE
Confidence 777888888887764
No 59
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.50 E-value=3.3e-13 Score=139.23 Aligned_cols=60 Identities=18% Similarity=0.424 Sum_probs=38.6
Q ss_pred eCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCcc
Q 010006 460 IGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTI 519 (520)
Q Consensus 460 Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gtv 519 (520)
||+++.|. ++.|+++++||++|.|.+.+.+...+++|++|+|+.+. ++||++++|+++++
T Consensus 247 IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~ 312 (372)
T 3pmo_A 247 IGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM 312 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE
Confidence 44444443 45566667777777777777777777777777777772 34566666666554
No 60
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.49 E-value=1.9e-13 Score=135.05 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=82.8
Q ss_pred ccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc------------ccE-EE
Q 010006 372 SFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE------------DTL-LM 436 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~------------~~~-i~ 436 (520)
.++++.+.|...+.+.|.+.+. .++.||++|+|++ |.|. ++.||++|.|+++|.|. ..+ +.
T Consensus 8 a~I~~~a~Ig~~~~Ig~~~~I~----~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG 83 (270)
T 1j2z_A 8 AIISPKAEINKGVEIGEFCVIG----DGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIG 83 (270)
T ss_dssp CEECTTSEECTTCEECTTCEEC----TTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEEC
T ss_pred CEECCCCEECCCCEECCCCEEC----CCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEEC
Confidence 3344455555555555555443 4788899999987 8888 89999999999888884 222 22
Q ss_pred CCccccccccccccccCCCc----ceeeCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----E
Q 010006 437 GADYYETDADRRFLAAKGSV----PIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----V 506 (520)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~----~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v 506 (520)
+++.... ++.+..+.. .+.||+++.|. ++.|++++.||++|+|.+...+..+++++++++|+.+. +
T Consensus 84 ~~~~I~~----~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v 159 (270)
T 1j2z_A 84 EDNLIRE----FCMINPGTEGGIKKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFV 159 (270)
T ss_dssp SSCEECT----TCEECCCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTC
T ss_pred CCCEECC----CeEEcCCeecCCccEEECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCc
Confidence 2222211 112221110 24566666664 55555556666666665555555555555555555441 6
Q ss_pred EEcCCCEeCCCccC
Q 010006 507 TIIKDALIPSGTII 520 (520)
Q Consensus 507 ~Ig~~~~i~~gtvi 520 (520)
+||++++|++|++|
T Consensus 160 ~IG~~a~Ig~~s~V 173 (270)
T 1j2z_A 160 RIAKGCMIAGKSAL 173 (270)
T ss_dssp EECTTCEECTTCEE
T ss_pred EeCCceEEecCcEe
Confidence 78888888888763
No 61
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.48 E-value=2.1e-13 Score=134.42 Aligned_cols=140 Identities=15% Similarity=0.116 Sum_probs=80.3
Q ss_pred cccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc-------------ccEEEC
Q 010006 373 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE-------------DTLLMG 437 (520)
Q Consensus 373 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~-------------~~~i~~ 437 (520)
.+++.+.|...+.+.|.+.+. .++.||++|+|++ +.|. ++.||++|.|+++|.|. +..+.+
T Consensus 15 ~i~~~a~Ig~~v~Ig~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~ 90 (265)
T 4e6u_A 15 IIDPSAVIASDVQIGPYCIIG----PQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGN 90 (265)
T ss_dssp EECTTCEECTTCEECTTCEEC----TTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECS
T ss_pred EECCCCEECCCCEECCCeEEC----CCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECC
Confidence 344444555555555554443 5678888888887 7777 68888888888888882 223333
Q ss_pred Ccccccccc---------ccccccCCCcceeeCCCCEE-cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEE
Q 010006 438 ADYYETDAD---------RRFLAAKGSVPIGIGKNSHI-KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVT 507 (520)
Q Consensus 438 ~~~~~~~~~---------~~~~~~~~~~~~~Ig~~~~i-~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~ 507 (520)
++.....+. ..+.||+++ .|+.+++| ++++|++++.|+.++.+.+...+++.++++.++.|..+ ++
T Consensus 91 ~~~Ig~~~~I~~g~~~~~~~~~IG~~~---~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~-v~ 166 (265)
T 4e6u_A 91 NNLIREHCSLHRGTVQDNALTKIGSHN---LLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQF-CK 166 (265)
T ss_dssp SCEECTTCEEECCCTTTTSEEEECSSC---EECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTT-CE
T ss_pred CeEECCceEECcccccCCCceEEccCc---EEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCC-cE
Confidence 222221111 123444444 34444444 34555555555555555555555555555555555566 77
Q ss_pred EcCCCEeCCCccC
Q 010006 508 IIKDALIPSGTII 520 (520)
Q Consensus 508 Ig~~~~i~~gtvi 520 (520)
||++++|++|++|
T Consensus 167 Ig~~~~i~~~svV 179 (265)
T 4e6u_A 167 IDSYSMIGGASLI 179 (265)
T ss_dssp ECTTCEECTTCEE
T ss_pred ECCCCEEcCCCEE
Confidence 8888888888764
No 62
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.47 E-value=2.6e-13 Score=132.29 Aligned_cols=140 Identities=17% Similarity=0.272 Sum_probs=103.9
Q ss_pred CccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEee-----eEECCCCEECCCCEEcccEEE-------C
Q 010006 371 FSFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH-----SVVGLRSCISEGAIIEDTLLM-------G 437 (520)
Q Consensus 371 ~~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~-----s~Ig~~~~Ig~~~~I~~~~i~-------~ 437 (520)
+.+++....+.+.+.+.|++.+. .++.||++|.|++ |.|.. .+||++|.|+++|.|...... .
T Consensus 53 ~~~~~~~~~I~~~~~I~~~a~I~----g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~ 128 (247)
T 1qre_A 53 WNPEPSAPVIDPTAYIDPQASVI----GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIE 128 (247)
T ss_dssp TBSSCCCCEECTTCEECTTCEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCG
T ss_pred ccccCCCcEECCCcEECCCCEEe----CCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccc
Confidence 45666777888888888888775 4677788888877 77663 389999999999999654210 0
Q ss_pred Cccccccc-cccccccCCCcceeeCCCCEEcc-eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeC
Q 010006 438 ADYYETDA-DRRFLAAKGSVPIGIGKNSHIKR-AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIP 515 (520)
Q Consensus 438 ~~~~~~~~-~~~~~~~~~~~~~~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~ 515 (520)
..+++... ...+.||+++ .||+++.|.+ ++||++|.||.+++|.+ ..+++.+.++.++.| .+ +.|+++++|+
T Consensus 129 ~~~~~~~~~~~~v~IG~~v---~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~-v~Ig~~~~IgagsvV-~~-~~I~~~~~v~ 202 (247)
T 1qre_A 129 DNIVEVDGKEYAVYIGNNV---SLAHQSQVHGPAAVGDDTFIGMQAFVFK-SKVGNNCVLEPRSAA-IG-VTIPDGRYIP 202 (247)
T ss_dssp GGCEEETTEEESEEECTTC---EECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECTTCEE-ES-CEECTTBEEC
T ss_pred cceeeccCccCceEECCCC---EECCCCEEcCCcEECCCCEECCCCEEec-eEECCCCEECCCCEE-CC-eEeCCCCEEC
Confidence 11111111 1357888888 8999999997 99999999999999987 777777777777777 66 6788888888
Q ss_pred CCccC
Q 010006 516 SGTII 520 (520)
Q Consensus 516 ~gtvi 520 (520)
+|++|
T Consensus 203 ~g~vv 207 (247)
T 1qre_A 203 AGMVV 207 (247)
T ss_dssp TTCEE
T ss_pred CCCEE
Confidence 88764
No 63
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.46 E-value=1.4e-12 Score=123.70 Aligned_cols=114 Identities=19% Similarity=0.199 Sum_probs=83.9
Q ss_pred eEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeEEEEeccChhHHHHHHHHhhhccCCCCcCCC
Q 010006 90 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEG 169 (520)
Q Consensus 90 ~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~ 169 (520)
|.|||||||.|+||+ .||+|+|++|+ |||+|+++.+..+ +|+|++++ .+.+. .+.+.+ +
T Consensus 1 m~aiILAgG~s~Rmg-----~~K~ll~~~G~-pli~~~~~~l~~~---~vvvv~~~-~~~~~-~~~~~~--------~-- 59 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG-----MEKTEVMLCGK-KLIEWVLEKYSPF---QTVFVCRD-EKQAE-KLSSRY--------E-- 59 (208)
T ss_dssp CEEEEECCCCCTTTT-----SCGGGCEETTE-EHHHHHHHHHTTS---EEEEECSS-HHHHH-HHHTTS--------C--
T ss_pred CEEEEECCCchhhCC-----CCCcccEECCe-eHHHHHHHHhcCC---CEEEEECC-HHHHH-HHHHhc--------C--
Confidence 689999999999997 69999999987 9999999999987 89999864 33332 333211 1
Q ss_pred eEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-ecccc-HHHHHHHHHhcCCcEE
Q 010006 170 FVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRMD-YERFIQAHRETDADIT 236 (520)
Q Consensus 170 ~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~d-l~~ll~~h~~~~a~~t 236 (520)
+.++.. +.+..|..++++.++..+ . +.+ +++||+ +++.+ +..+++.+.+.+.+++
T Consensus 60 -~~~v~d------~~~~~G~~~si~~gl~~~-~---~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v 116 (208)
T 3ngw_A 60 -AEFIWD------LHKGVGSIAGIHAALRHF-G---SCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDAL 116 (208)
T ss_dssp -SCEECC------TTCCCSHHHHHHHHHHHH-S---SEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred -CeEEec------CCCCCChHHHHHHHHHHc-C---CCE-EEECCccCCCHHHHHHHHHHhhcCCCCEE
Confidence 223321 112368889999999777 2 678 999999 66655 8888888776566654
No 64
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.44 E-value=1.8e-14 Score=152.74 Aligned_cols=110 Identities=19% Similarity=0.193 Sum_probs=81.3
Q ss_pred CCCcCCCceeecccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeC
Q 010006 383 QPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIG 461 (520)
Q Consensus 383 ~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig 461 (520)
.+.+.|.+.+. .++.||++|.|++ |.|.+++||++|.|+++|+|.++++.++ +.||
T Consensus 279 ~a~I~p~a~i~----g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~-------------------~~Ig 335 (496)
T 3c8v_A 279 GASVSGYAVIK----GDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERN-------------------CVTA 335 (496)
T ss_dssp TCEECTTSEEE----SSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEES-------------------CEEC
T ss_pred CcEECCCcEEe----CCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCC-------------------CEEC
Confidence 34444444443 5788999999998 8888999999999999999998888775 5899
Q ss_pred CCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEc--CCCEeCCCc
Q 010006 462 KNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTII--KDALIPSGT 518 (520)
Q Consensus 462 ~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig--~~~~i~~gt 518 (520)
+++.|.+++||++|.||.+++|.++. ...+++|++|+|+.+ ++|. +++.||+|+
T Consensus 336 ~~a~I~gv~IGd~v~IG~~a~I~~~~--~~~v~IG~~a~IGag-svV~~~~~~~I~~~s 391 (496)
T 3c8v_A 336 HGGKIINAHLGDMIFTGFNSFLQGSE--SSPLKIGDGCVVMPH-TIIDLEEPLEIPAGH 391 (496)
T ss_dssp TTCEEESEEEEETCEECTTCEEECCS--SSCEEECTTCEECTT-CEEECSSCEEECSSE
T ss_pred CCcEEcCceECCCcEECCCCEEeCCC--CcceEECCCCEECCC-CEEecCCCcEeCCCC
Confidence 99999999999999999999998761 122345555555555 4444 444444444
No 65
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.44 E-value=1.5e-12 Score=137.90 Aligned_cols=209 Identities=17% Similarity=0.146 Sum_probs=138.9
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecC-CccchhHHHHHHhHhCCCC-----eEEEEec-cChhHHHHHHH-Hhhh
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG-ANYRLIDIPVSNCLNSNIS-----KIYVLTQ-FNSASLNRHLS-RAYA 159 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~-G~~plI~~~l~~l~~~gi~-----~I~Iv~~-~~~~~i~~~l~-~~~~ 159 (520)
.++.+||||||.||||+ ...||+|+||+ |+ |+|+++++++...|.. .++|.+. +..+.+.+||+ +...
T Consensus 74 ~k~avViLAGGlGTRLg---~~~PK~llpV~~gk-~fLe~~ie~l~~~~~~~g~~ip~viMtS~~t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 74 QSTVVLKLNGGLGTGMG---LCDAKTLLEVKDGK-TFLDFTALQVQYLRQHCSEHLRFMLMDSFNTSASTKSFLKARYPW 149 (505)
T ss_dssp HTEEEEEEECCCCGGGT---CCSCGGGSEEETTE-EHHHHHHHHHHHHHHHTCTTCEEEEEECHHHHHHHHHHHHHHCHH
T ss_pred hcceEEEEcCCcccccC---CCCCCcccccCCCC-cHHHHHHHHHHHHHHhcCCCcCEEEEeCCCCHHHHHHHHhhhhhc
Confidence 47999999999999999 67999999999 76 9999999999887533 4555554 55888999998 5433
Q ss_pred ccCC---CC-cCCCeEEEeeccc-C-------CCCCCCccCcHHHHHHH-----HHHhhhcCcceEEEEeCceecc-ccH
Q 010006 160 SNMG---GY-KNEGFVEVLAAQQ-S-------PENPNWFQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYR-MDY 221 (520)
Q Consensus 160 ~~~~---~~-~~~~~v~vl~~~~-~-------~~~~~~~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~-~dl 221 (520)
|++. .. |..+.+..+.... . +.....+.|+++.+... ++.+.....++++|.++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 4331 01 2212122211110 0 00001246999988755 3333333468999999999874 577
Q ss_pred HHHHHHHHhcCCcEEEEEEecCcccCcceEEEEeC------CCCC---------EEEeeeCCChhhhhhcccccccccCC
Q 010006 222 ERFIQAHRETDADITVAALPMDEKRATAFGLMKID------EEGR---------IIEFSEKPKGEQLKAMKVDTTILGLD 286 (520)
Q Consensus 222 ~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d------~~g~---------V~~~~ekp~~~~~~~~~~~~~~~~~~ 286 (520)
.++..|.++++++++.+.+... ....+|++..+ .+|+ +.++.+-|....... +
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~~-~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~----~------ 297 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRTE-SDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESF----Q------ 297 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECCT-TCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHH----H------
T ss_pred -HHHHHHHhcCCcEEEEEEEecC-CccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcc----c------
Confidence 8999999999999999887654 23468887762 3566 555556555432210 0
Q ss_pred chhhccCCceeeeeEEEEeHHHHHHHHhh
Q 010006 287 DERAKEMPYIASMGIYVISKDVMLNLLRD 315 (520)
Q Consensus 287 ~~~~~~~~~l~~~GIyifs~~vl~~ll~~ 315 (520)
....-.+.++...+|+-+.+.++++.
T Consensus 298 ---g~~~f~~~Ninn~~~~l~~l~~~~~~ 323 (505)
T 2oeg_A 298 ---DINKYSFFNTNNLWIRLPVLLETMQE 323 (505)
T ss_dssp ---CTTTTCEEEEEEEEEEHHHHHHHHHH
T ss_pred ---CccccCeeEEEEEEEEHHHHHHHHhh
Confidence 00111246889999999999888775
No 66
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.43 E-value=8.2e-13 Score=129.84 Aligned_cols=137 Identities=18% Similarity=0.221 Sum_probs=72.4
Q ss_pred cCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcc------------cEEEC-Cc
Q 010006 375 DRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIED------------TLLMG-AD 439 (520)
Q Consensus 375 ~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~------------~~i~~-~~ 439 (520)
++.+.+...+.+.|++.+. .++.||++|+|++ |.|. ++.||++|.|+++|.|.. .+.++ ++
T Consensus 15 ~~~a~Ig~~v~I~~~~~I~----~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~ 90 (262)
T 2qia_A 15 EEGASIGANAHIGPFCIVG----PHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRN 90 (262)
T ss_dssp CTTCEECTTCEECTTCEEC----TTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSC
T ss_pred CCCCEECCCCEECCCCEEC----CCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCc
Confidence 3334444444444444432 4677888888877 7777 788888888888888853 22222 21
Q ss_pred cccccccccccccCCC----cceeeCCCCEEc-ceEECCCCEECCCcEEecCC------CcCCcccccCCeEEccCeEEE
Q 010006 440 YYETDADRRFLAAKGS----VPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSD------SVQEAARETDGYFIKSGIVTI 508 (520)
Q Consensus 440 ~~~~~~~~~~~~~~~~----~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~------~v~~~~~~~~~~~I~~~~v~I 508 (520)
.... ++.+..+. -++.||+++.|. ++.|.+++.||++++|.+.. .+++.+.++.++.|..+ ++|
T Consensus 91 ~Ig~----~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~-v~I 165 (262)
T 2qia_A 91 RIRE----SVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQF-CII 165 (262)
T ss_dssp EECT----TCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTT-CEE
T ss_pred eeCC----CCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCC-CEE
Confidence 1111 11111110 013444444443 34444444444444444444 44444444555555555 778
Q ss_pred cCCCEeCCCccC
Q 010006 509 IKDALIPSGTII 520 (520)
Q Consensus 509 g~~~~i~~gtvi 520 (520)
|++++|++|++|
T Consensus 166 g~~~~ig~~s~V 177 (262)
T 2qia_A 166 GAHVMVGGCSGV 177 (262)
T ss_dssp CTTCEECSSCEE
T ss_pred CCCCEEccCCEE
Confidence 888888888764
No 67
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.43 E-value=9.4e-13 Score=130.09 Aligned_cols=32 Identities=22% Similarity=0.384 Sum_probs=21.4
Q ss_pred CcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 488 SVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 488 ~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.+++.+++|.++.|..+ ++||++++|++||+|
T Consensus 172 ~Ig~~~~IG~~~~I~~g-~~IG~~~~IgagsvV 203 (273)
T 3fs8_A 172 TIELFAVIAARSVVLPG-IHINEDALVGAGAVV 203 (273)
T ss_dssp EECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred EECCCeEEcCCCEEcCC-CEECCCCEECCCCEE
Confidence 34444555555556666 778888888888874
No 68
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.42 E-value=4.7e-13 Score=125.59 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=84.7
Q ss_pred CCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe----eeEECCCCEECCCCEEcccEEECCcccc-ccccccc
Q 010006 376 RSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIEDTLLMGADYYE-TDADRRF 449 (520)
Q Consensus 376 ~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~----~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~-~~~~~~~ 449 (520)
++..|.+.+.+.+.+.+. .++.||++|+|++ |.|. +..||++|.|+++|.|.+.......... ......+
T Consensus 11 ~~v~I~~~a~I~~~a~I~----g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~ 86 (194)
T 3tv0_A 11 KSVKIAPGAVVCVESEIR----GDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPM 86 (194)
T ss_dssp -CEEECTTCEECTTSEEE----SSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCE
T ss_pred CCCEECCCCEEcCCCEEe----CCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCce
Confidence 344555666666666654 5788888888887 7775 3689999999999999765443322111 1122556
Q ss_pred cccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 450 LAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 450 ~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
.+|+++ .|+.++.+.++.|++++.||.+++|... +.+|++|+|++| ++|.+++.||++++
T Consensus 87 ~Ig~~~---~i~~~~~i~~~~Ig~~~~Ig~~~~I~~g------v~IG~~~~Igag-svV~~~~~Ip~~sv 146 (194)
T 3tv0_A 87 IIGTNN---VFEVGCYSQAMKMGDNNVIESKAYVGRN------VILTSGCIIGAC-CNLNTFEVIPENTV 146 (194)
T ss_dssp EECSSC---EECTTCEECCSEECSSCEECTTCEECTT------EEECSSCEECTT-CEECCCEEECTTEE
T ss_pred EECCcc---eEecceeEeeeeecccceecceeeECCe------EEECCCCEECCC-CEECCCcEECCCCE
Confidence 777776 6788888888888888888888887654 455556666666 55555555555554
No 69
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.41 E-value=1.2e-12 Score=122.51 Aligned_cols=124 Identities=15% Similarity=0.283 Sum_probs=86.9
Q ss_pred ccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe----eeEECCCCEECCCCEEcccEEECCcccccccc
Q 010006 372 SFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIEDTLLMGADYYETDAD 446 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~----~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~ 446 (520)
.+.++...+...+.+.|++.+. .++.||++|.|+. |.|. +..||++|.|+++|.|......+
T Consensus 28 ~~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g--------- 94 (191)
T 3ixc_A 28 PYAGVSPSVDSTAFIAGNARII----GDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHG--------- 94 (191)
T ss_dssp CBTTBCCEECTTSEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----C---------
T ss_pred cccCCCCEECCCCEECCCCEEe----CCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcC---------
Confidence 4566677777788888887775 4677888888877 7775 34899999999999997321100
Q ss_pred ccccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 447 RRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 447 ~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
++.||+++ .||+++.|.+++|+++|.||.+++|.+.. +++++++|+++ ++|.++..|+++++
T Consensus 95 -~~~Ig~~~---~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~~------~Ig~~~~Ig~g-svV~~~~~i~~~~~ 156 (191)
T 3ixc_A 95 -DTVIGKFV---TIGHSCILHACTLGNNAFVGMGSIVMDRA------VMEEGSMLAAG-SLLTRGKIVKSGEL 156 (191)
T ss_dssp -CEEECTTC---EECTTCEECSCEECTTCEECTTCEECTTC------EECTTCEECTT-CEECTTCEECTTEE
T ss_pred -CeEECCCC---EECCCCEEECCEECCCCEECCCCEEeCCe------EECCCCEECCC-CEECCCcCcCCCeE
Confidence 22333344 79999999999999999999999987644 45556666666 55566666666554
No 70
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.40 E-value=7.4e-14 Score=135.56 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=19.0
Q ss_pred CceEEEEEecce----EEeCCCHHHHHHhhhhcc
Q 010006 335 GMRVQAYLYDGY----WEDIGTIEAFYNANLGIT 364 (520)
Q Consensus 335 ~~~v~a~~~~g~----w~dI~t~~dy~~An~~~l 364 (520)
..+++++...++ |.|+++ |++++..++
T Consensus 38 ~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l 68 (240)
T 3r8y_A 38 TVQAFVNKKSGVLFGEWSEIKT---ILDENSKYI 68 (240)
T ss_dssp TSEEEECSSEEEEEEEHHHHHH---HHHHTTTTE
T ss_pred cceEEEcCCCeEEEccHHHHHH---HHHhcccee
Confidence 567777766666 888877 777777654
No 71
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.40 E-value=1.1e-12 Score=135.38 Aligned_cols=170 Identities=13% Similarity=0.149 Sum_probs=87.4
Q ss_pred EEeCCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe---------
Q 010006 347 WEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH--------- 414 (520)
Q Consensus 347 w~dI~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~--------- 414 (520)
+.-+.+|...+.....++.........++|.+.+...+.+.+++.+. ++.| .++.||++|+|+. |.|.
T Consensus 95 ~l~~~~p~~~~~~~~~~~~~~~~~~~~i~p~a~i~~~a~Ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~v~IG~~~ 174 (372)
T 3pmo_A 95 ALVVANPYLAYASLSHLFDRKPKAAAGIHPTAIVAADAEVDPSASVGAYAVIESGARIGAGVSIGAHCVIGARSVIGEGG 174 (372)
T ss_dssp EEECSCHHHHHHHHHGGGCCCCCCCSEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEEECCHHHHHHHHHHHhccccccccccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCc
Confidence 45566776655444444333212234556666665555555555443 2222 2344444444433 3333
Q ss_pred ----eeEECCCCEECCCCEEcccEEECCccccc----------cccccccccCCCcceeeCCCCEE-----cceEECCCC
Q 010006 415 ----HSVVGLRSCISEGAIIEDTLLMGADYYET----------DADRRFLAAKGSVPIGIGKNSHI-----KRAIIDKNA 475 (520)
Q Consensus 415 ----~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~Ig~~~~i-----~~~ii~~~~ 475 (520)
++.|+.+|.||++|.|.....++++-|.. .....+.||+++ .||.+++| .+++|++++
T Consensus 175 ~I~~~~~I~~~~~IG~~v~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v---~IGa~~~I~~g~~~~t~IG~~~ 251 (372)
T 3pmo_A 175 WLAPRVTLYHDVTIGARVSIQSGAVIGGEGFGFANEKGVWQKIAQIGGVTIGDDV---EIGANTTIDRGALSDTLIGNGV 251 (372)
T ss_dssp EECTTCEECTTEEECTTCEECTTCEEEECCCCEEEETTEEEECCCCCCEEECSSC---EECTTCEEECCSSSCEEECTTC
T ss_pred ccCCCcEEEeeeEECceeeccCCcEEecCcccccccCCcceeccccCCeEECCCC---EECCCcEEccCcccceEECCCC
Confidence 33333333344444443333333221100 001256666666 56777666 456666666
Q ss_pred EECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 476 RIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 476 ~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.|+.++.|.....+++++.++.++.|..+ ++||+++.|+++++|
T Consensus 252 ~I~~~v~I~~~v~IG~~~~I~~~~~I~~~-v~IG~~~~Ig~~a~V 295 (372)
T 3pmo_A 252 KLDNQIMIAHNVQIGDHTAMAACVGISGS-AKIGRHCMLAGGVGL 295 (372)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCC-CEECCCeEEeCCCEE
Confidence 66666666655555565555555656656 888888888888764
No 72
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.40 E-value=1.7e-12 Score=133.21 Aligned_cols=170 Identities=15% Similarity=0.174 Sum_probs=84.6
Q ss_pred eEEeCCCHHHHHHhhhhcccCCCCCCccccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCC
Q 010006 346 YWEDIGTIEAFYNANLGITKKPIPDFSFYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLR 421 (520)
Q Consensus 346 ~w~dI~t~~dy~~An~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~ 421 (520)
.|.-+++|...+.....++..... ...++|.+.|.+++.+.+++.+. ++.| .++.||++|+|++ |.|. ++.||++
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~~~~~-~~~i~p~a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~ 156 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFDKKIS-STGIESTARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKD 156 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSSCCCC-CCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSS
T ss_pred cEEEECCHHHHHHHHHHHhccccc-cCeeCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 466678887655444444433212 14455555555555554444443 2222 2344444444443 4443 3444444
Q ss_pred CEECCCCEE------------cccEEECCcccccc----------ccccccccCCCcceeeCCCCEE-----cceEECCC
Q 010006 422 SCISEGAII------------EDTLLMGADYYETD----------ADRRFLAAKGSVPIGIGKNSHI-----KRAIIDKN 474 (520)
Q Consensus 422 ~~Ig~~~~I------------~~~~i~~~~~~~~~----------~~~~~~~~~~~~~~~Ig~~~~i-----~~~ii~~~ 474 (520)
|.|+++|+| ....+++++-|... ....+.||+++ .||.+++| .+++|+++
T Consensus 157 ~~I~~~~~I~~~~~IG~~~~I~~g~~Ig~dgfg~~~~~g~~~~i~~~g~v~IGd~v---~IG~~~~I~~g~~~~t~Ig~~ 233 (357)
T 4e79_A 157 CFIDSYVTITGSSKLRDRVRIHSSTVIGGEGFGFAPYQGKWHRIAQLGSVLIGNDV---RIGSNCSIDRGALDNTILEDG 233 (357)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEESCCCCCEEEETTEEEECCCCCCEEECTTC---EECTTCEECCCSSSCEEECTT
T ss_pred CEECCCcEEecccEEEeEeeccCCeEECcccCcccccCCceeeccccCcEEEcCCc---EEccccEEeccccCCccccCC
Confidence 444433333 33333332211000 01245555555 56666655 34555555
Q ss_pred CEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 475 ARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 475 ~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+.|+.++.|...+.+++++.++.++.|..+ ++||+++.|+++++|
T Consensus 234 ~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~-v~IG~~~~Ig~~s~V 278 (357)
T 4e79_A 234 VIIDNLVQIAHNVHIGSNTAIAAKCGIAGS-TKIGKNCILAGACGV 278 (357)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred cccCCCcccCCCeEECCCCEECCCCEECCC-cEECCCCEECcCCEE
Confidence 555555555555555555555555555555 888888888888764
No 73
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.39 E-value=2.3e-12 Score=129.59 Aligned_cols=63 Identities=22% Similarity=0.261 Sum_probs=45.9
Q ss_pred eeeCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCccC
Q 010006 458 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGTII 520 (520)
Q Consensus 458 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gtvi 520 (520)
+.||+++.|. ++.|++++.||++|.+.+...+..+.+++++++|+.+. ++||++++|++|++|
T Consensus 133 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~g~v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V 201 (305)
T 3t57_A 133 TVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVV 201 (305)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEE
T ss_pred cEEccCccccceEEEeCceEeCCceEECCCcccCCCCEECCceEEcCCCEEcCCeEECCCCEEcCCCeE
Confidence 4566666664 67777777788887777777777777777777777662 668888888888764
No 74
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.39 E-value=1.8e-12 Score=119.37 Aligned_cols=123 Identities=15% Similarity=0.134 Sum_probs=88.4
Q ss_pred cccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEee----eEECCCCEECCCCEEcccEEECCccccccccc
Q 010006 373 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH----SVVGLRSCISEGAIIEDTLLMGADYYETDADR 447 (520)
Q Consensus 373 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~----s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~ 447 (520)
+.++...+.+.+.+.|++.+. .++.||++|.|+. +.|.. +.||++|.|+++|.|.... ..
T Consensus 6 ~~~~~~~i~~~~~I~~~a~i~----g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~-----------~~ 70 (173)
T 1v3w_A 6 INGKKPRIHPSAFVDENAVVI----GDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSH-----------GY 70 (173)
T ss_dssp BTTBCCEECTTCEECTTSEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBT-----------TB
T ss_pred cCCCCCEECCCCEECCCCEEe----CCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecC-----------CC
Confidence 344555677777788887775 4677888888887 77763 8999999999999997530 01
Q ss_pred cccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEe
Q 010006 448 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 514 (520)
Q Consensus 448 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i 514 (520)
++.+|+++ .|++++.|.+++|++++.||.++.|.+...+++.+.++.++.|..+ +.|++++++
T Consensus 71 ~~~Ig~~~---~I~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~-~~i~~~~~v 133 (173)
T 1v3w_A 71 PTEIGEYV---TIGHNAMVHGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPN-KEIPDYSLV 133 (173)
T ss_dssp CEEECSSC---EECTTCEEESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTT-CEECTTEEE
T ss_pred CeEECCCC---EECCCCEECCCEECCCCEECCCCEEeCCCEECCCCEECCCCEECCC-cEeCCCcEE
Confidence 23334444 7999999999999999999999999876666665555555555555 455555555
No 75
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.37 E-value=2.8e-12 Score=118.04 Aligned_cols=122 Identities=17% Similarity=0.238 Sum_probs=83.1
Q ss_pred ccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEee----eEECCCCEECCCCEEcccEEECCcccccccccc
Q 010006 374 YDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH----SVVGLRSCISEGAIIEDTLLMGADYYETDADRR 448 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~----s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~ 448 (520)
.++...+.+.+.+.|++.+. .++.||++|.|+. +.|.. +.||++|.|+++|.|.... ..+
T Consensus 9 ~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~-----------~~~ 73 (173)
T 1xhd_A 9 KEKKPKIASSAFIADYVTIT----GDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSP-----------QYP 73 (173)
T ss_dssp TTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCT-----------TCC
T ss_pred CCCCCEECCCcEECCCCEEE----CCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCC-----------CCC
Confidence 44556677777777777765 5678888888887 77764 7999999999999997310 012
Q ss_pred ccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEe
Q 010006 449 FLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 514 (520)
Q Consensus 449 ~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i 514 (520)
+.||+++ .|++++.|.+++|+++|.||.+++|.+...+++.+.++.++.+..+ ..|++++++
T Consensus 74 ~~Ig~~~---~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~-~~i~~~~vv 135 (173)
T 1xhd_A 74 LILEDDV---TVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQG-KKIPPNTLA 135 (173)
T ss_dssp EEECTTC---EECTTCEEESCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTEEE
T ss_pred eEECCCC---EECCCCEEeCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCC-cEeCCCCEE
Confidence 3333344 7999999999999999999999998765555444444444444433 334444443
No 76
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.37 E-value=2.9e-12 Score=125.79 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=20.8
Q ss_pred eCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 460 IGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 460 Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
||+++.|. ++.+..+++||++|.|...+.+....+++++++|+.+
T Consensus 124 IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~ 169 (259)
T 3hsq_A 124 LGNNNILTHGAVLAGHVTLGNFAFISGLVAVHQFCFVGDYSMVAGL 169 (259)
T ss_dssp ECSSCEECTTCEECTTCEECSSCEECSSEEECTTCEECTTCEECSS
T ss_pred ECCccEEcCCceECCccEECCCcEEeCCCEECCCCEECCCCEECCC
Confidence 34444333 3444444444444444444444444455555555555
No 77
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.37 E-value=2.8e-12 Score=130.96 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=25.5
Q ss_pred eCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 460 IGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 460 Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
||+++.|. ++.|..+++||++|+|...+.+..+..++++++|+.+
T Consensus 243 IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~ 288 (341)
T 3eh0_A 243 IGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGM 288 (341)
T ss_dssp ECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTT
T ss_pred ECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeC
Confidence 33333333 3444445556666666666666666666666666666
No 78
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.36 E-value=2.2e-12 Score=120.58 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=33.9
Q ss_pred eeCCCCEEc-ceEECCCCEECCCcEEec---------------CCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 459 GIGKNSHIK-RAIIDKNARIGDNVKIVN---------------SDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 459 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~---------------~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.|++++.|. ++.|++++.||+++.+.+ ...+++.+++|.++.|..+ ++||++++|++|++|
T Consensus 59 ~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g-~~Ig~~~~IgagsvV 135 (192)
T 3mqg_A 59 KIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCG-ATIGRYAFVGAGAVV 135 (192)
T ss_dssp EECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred EEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCC-CEECCCCEEcCCCEE
Confidence 455555553 555666666666555543 1233444455555555555 666666666666653
No 79
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.35 E-value=4.3e-12 Score=125.00 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=70.6
Q ss_pred ccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCc----ccccccc-
Q 010006 374 YDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGAD----YYETDAD- 446 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~----~~~~~~~- 446 (520)
+.|.+.|.+.+.+.+++.+. ..++|++++.|++ +.|. +++|..++.||++|.|.....++.. .|. ...
T Consensus 7 I~p~a~I~~~a~Ig~~v~I~----~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~-g~~~ 81 (266)
T 3r0s_A 7 IHPSAVIEEGAQLGDDVVIE----AYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYK-EEQK 81 (266)
T ss_dssp BCTTCEECTTCEECTTCEEC----TTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC-----
T ss_pred cCCCCEECCCCEECCCCEEC----CCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCcccccc-CCcC
Confidence 44544444444444433332 4566666666666 6665 5666667777777777666666311 010 011
Q ss_pred ccccccCCCcceeeCCCCEEcc--------eEECCC------------CEECCCcEEecCCCcCCcccccCCeEEccCeE
Q 010006 447 RRFLAAKGSVPIGIGKNSHIKR--------AIIDKN------------ARIGDNVKIVNSDSVQEAARETDGYFIKSGIV 506 (520)
Q Consensus 447 ~~~~~~~~~~~~~Ig~~~~i~~--------~ii~~~------------~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v 506 (520)
..+.||+++ .|+++++|.. ++||++ +.||++|.|.+...+.++.++|++++|+.+ +
T Consensus 82 ~~v~IG~~~---~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~-a 157 (266)
T 3r0s_A 82 SGVVIGKNA---TIREFATINSGTAKGDGFTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGL-T 157 (266)
T ss_dssp CEEEECTTC---EECTTCEEECCCTTTTSEEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT-C
T ss_pred ceEEECCCC---EECCceEecCCcccCCccEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccC-C
Confidence 255666665 4555555542 444444 444444444444444444555555555555 5
Q ss_pred EEcCCCEeCCCcc
Q 010006 507 TIIKDALIPSGTI 519 (520)
Q Consensus 507 ~Ig~~~~i~~gtv 519 (520)
+|.+++.||++++
T Consensus 158 ~V~~~v~Ig~~a~ 170 (266)
T 3r0s_A 158 PIHQFVKVGEGCM 170 (266)
T ss_dssp EECTTCEECTTCE
T ss_pred EECCCcEECCCCE
Confidence 5555555555554
No 80
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.35 E-value=5e-12 Score=117.65 Aligned_cols=130 Identities=15% Similarity=0.213 Sum_probs=91.2
Q ss_pred ccccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-e---eEECCCCEECCCCEEcccEEECCcccccccc
Q 010006 372 SFYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-H---SVVGLRSCISEGAIIEDTLLMGADYYETDAD 446 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~---s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~ 446 (520)
.+.+....+...+.+.|++.+. .++.||++|.|++ +.|. + +.||++|.|+++|.|.... ........
T Consensus 10 ~~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~----~~~~~~~~ 81 (187)
T 3r3r_A 10 PYKNLFPGIGQRVMIDTSSVVI----GDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTH----KSSSNPHG 81 (187)
T ss_dssp CBTTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBC----CBTTBC-C
T ss_pred hhcccCcccCCCeEECCCCEEE----CceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCC----ccccCCCC
Confidence 3445566777778888888775 4678888888887 7776 3 4999999999999995321 11111122
Q ss_pred ccccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 447 RRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 447 ~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
..+.||+++ .||+++.|.+++||++|.||.+++|... ..++++++|+.+ ++|.++..|+++++
T Consensus 82 ~~~~Ig~~~---~Ig~~~~i~~~~Ig~~~~Ig~~~~I~~~------~~Ig~~~~Ig~~-s~V~~~~~i~~~~v 144 (187)
T 3r3r_A 82 NPLIIGEDV---TVGHKVMLHGCTIGNRVLVGMGSIVLDG------AIIEDDVMIGAG-SLVPQHKRLESGYL 144 (187)
T ss_dssp BCEEECSSC---EECTTCEEESCEECSSEEECTTCEECTT------CEECSSEEECTT-CEECTTCEECTTEE
T ss_pred CCeEECCCC---EECCCCEEeCcEECCCCEECCCCEECCC------CEECCCCEECCC-CEECCCcCcCCCcE
Confidence 456666777 7999999999999999999999999754 445556666666 55666666666654
No 81
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.35 E-value=5.2e-12 Score=117.65 Aligned_cols=129 Identities=17% Similarity=0.289 Sum_probs=90.9
Q ss_pred cccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe----eeEECCCCEECCCCEEcccEEECCccccccccc
Q 010006 373 FYDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH----HSVVGLRSCISEGAIIEDTLLMGADYYETDADR 447 (520)
Q Consensus 373 ~~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~----~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~ 447 (520)
+.+....+...+.+.|++.+. .++.||++|.|++ +.|. ++.||++|.|+++|.|..+..... .....
T Consensus 15 ~~~~~~~ig~~~~I~~~~~i~----~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~----~~~~~ 86 (189)
T 3r1w_A 15 YQGISPKLGERVFVDRSSVII----GDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDY----NPGGY 86 (189)
T ss_dssp BTTBCCEECTTCEECTTCEEE----EEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSS----STTCB
T ss_pred ccCcCCEECCCcEECCCCEEe----eeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccC----CCCCC
Confidence 344556677778888888775 4678888888887 7775 359999999999999977522111 11224
Q ss_pred cccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 448 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 448 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
.+.||+++ .||+++.|.+++||++|.||.+++|.+.. +++++++|+.+ ++|.++..|+++++
T Consensus 87 ~~~Ig~~~---~Ig~~~~i~~~~Ig~~~~Ig~~~~i~~~v------~Ig~~~~Ig~~-s~V~~g~~i~~~~v 148 (189)
T 3r1w_A 87 PLIIGDDV---TIGHQAMLHGCTIGNRVLIGMKSMIMDGA------IVEDEVIVAAG-ATVSPGKVLESGFV 148 (189)
T ss_dssp CEEECSSE---EECTTCEEESCEECSSEEECTTCEECTTC------EECSSCEECTT-CEECTTCEECTTEE
T ss_pred CeEECCCC---EECCCCEEeCcEECCCcEECCCCEEcCCC------EECCCCEEccC-CEECCCCEeCCCCE
Confidence 55666666 79999999999999999999999997544 45555666666 55555555555554
No 82
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.35 E-value=1.1e-11 Score=116.31 Aligned_cols=85 Identities=21% Similarity=0.327 Sum_probs=44.1
Q ss_pred cceEEC--CCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCC
Q 010006 398 TDSVIG--EGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKN 474 (520)
Q Consensus 398 ~~~~Ig--~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~ 474 (520)
.++.|| ++|+|++ +++|+.+++||++|.|...+.++++ +.||++++|. +++|..+
T Consensus 86 ~~~~Ig~~~g~~I~~----~~~I~~~~~IG~~~~I~~~~~i~~~------------------~~Ig~~~~I~~~~~i~~~ 143 (194)
T 3bfp_A 86 PSAIVEENAGILIMP----YVVINAKAKIEKGVILNTSSVIEHE------------------CVIGEFSHVSVGAKCAGN 143 (194)
T ss_dssp TTCEECTTSCCEECT----TCEECTTCEECTTCEECTTCEECTT------------------CEECTTCEECTTCEECTT
T ss_pred CCceeCCCCCcEEcC----CCEECCCCEECCCCEECCCCEEcCC------------------CEECCCCEECCCCEECCC
Confidence 345677 7777775 4555566666666666555544431 2455555554 4555555
Q ss_pred CEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 475 ARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 475 ~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
++||++|.|..++.+.+...+++++.|++|
T Consensus 144 ~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igag 173 (194)
T 3bfp_A 144 VKIGKNCFLGINSCVLPNLSLADDSILGGG 173 (194)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred cEECCCCEEcCCCEECCCCEECCCCEECCC
Confidence 555555555443333333444445555555
No 83
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.34 E-value=4.7e-12 Score=125.88 Aligned_cols=141 Identities=16% Similarity=0.238 Sum_probs=70.6
Q ss_pred cCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCcc----cccccc
Q 010006 375 DRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADY----YETDAD 446 (520)
Q Consensus 375 ~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~----~~~~~~ 446 (520)
.+...|.+++.+.|++++. ++.| ..++|++++.|+. |.|. +++|+.++.||++|.|.+.+.++... | ....
T Consensus 20 ~~~~~I~p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~-~g~~ 98 (283)
T 4eqy_A 20 GSMSRIHPTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKY-KDEP 98 (283)
T ss_dssp ---CCBCTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTC-CCCC
T ss_pred CCCcccCCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccc-cCCC
Confidence 3444566666666666654 2333 2344444444444 4444 45555555566666665555553210 0 0111
Q ss_pred ccccccCCCcceeeCCCCEEcc--------eEEC------------CCCEECCCcEEecCCCcCCcccccCCeEEccCeE
Q 010006 447 RRFLAAKGSVPIGIGKNSHIKR--------AIID------------KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIV 506 (520)
Q Consensus 447 ~~~~~~~~~~~~~Ig~~~~i~~--------~ii~------------~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v 506 (520)
..+.||+++ .|+++++|.. ++|| +++.||++|.|.+.+.+.++.++|++++|+.+ +
T Consensus 99 ~~v~IG~~~---~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~-a 174 (283)
T 4eqy_A 99 TRLVIGDRN---TIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGM-S 174 (283)
T ss_dssp CEEEECSSC---EECTTEEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT-C
T ss_pred ceEEECCCc---ccCcceeEccceecCCCceEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecC-C
Confidence 355666665 4555555542 4444 44445555555555555555555555555555 5
Q ss_pred EEcCCCEeCCCccC
Q 010006 507 TIIKDALIPSGTII 520 (520)
Q Consensus 507 ~Ig~~~~i~~gtvi 520 (520)
+|.+++.||++++|
T Consensus 175 ~V~~~v~Ig~~~vv 188 (283)
T 4eqy_A 175 GVHQYVRIGAHSML 188 (283)
T ss_dssp EECTTCEECTTCEE
T ss_pred EEcCCeEECCCcEE
Confidence 55566666665543
No 84
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.34 E-value=4.4e-12 Score=124.59 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=80.0
Q ss_pred CCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCcccc---cccccc
Q 010006 376 RSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYE---TDADRR 448 (520)
Q Consensus 376 ~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~---~~~~~~ 448 (520)
+.+.|.+.+.+.+++++. ++.| ..++|++++.|++ |.|. +++|+.++.||++|.|.+.+.++.+... .....+
T Consensus 4 ~~~~I~p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~ 83 (262)
T 2qia_A 4 KSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTR 83 (262)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCE
T ss_pred CCCeECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccc
Confidence 344444444455555443 2223 3455555555555 5554 5666666666666666666555432110 111235
Q ss_pred ccccCCCcceeeCCCCEEcc--------eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 449 FLAAKGSVPIGIGKNSHIKR--------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 449 ~~~~~~~~~~~Ig~~~~i~~--------~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
+.+|+++ .|+++++|.. ++||+++.|+.++.|.....+++.+.++.++.+..+ ++||+++.|+++++
T Consensus 84 ~~IG~~~---~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~-v~Ig~~~~Ig~~~~ 158 (262)
T 2qia_A 84 VEIGDRN---RIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGH-VSVDDFAIIGGMTA 158 (262)
T ss_dssp EEECSSC---EECTTCEEECCCTTTTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred eEECCCc---eeCCCCEEcCCccCCCCcCEECCCcEEeeeeEECCCCEECCCeEECCcccccCC-cEECCCcEEccCCE
Confidence 6777777 6777777752 777788877777777666666666555555555555 55666666655554
No 85
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.33 E-value=1e-12 Score=132.06 Aligned_cols=171 Identities=20% Similarity=0.295 Sum_probs=85.1
Q ss_pred ccchHhhhhCCceEEEEEecceEE-----eCCCHHHHHHhhhhcccCCCCCCccccCC----------CccccCCCcCCC
Q 010006 325 SEVIPGATSIGMRVQAYLYDGYWE-----DIGTIEAFYNANLGITKKPIPDFSFYDRS----------APIYTQPRYLPP 389 (520)
Q Consensus 325 ~dil~~li~~~~~v~a~~~~g~w~-----dI~t~~dy~~An~~~l~~~~~~~~~~~~~----------~~i~~~~~~~~~ 389 (520)
.++|..|-+.+.++..+ .++.|. +......|......+.... ..+.|++.- ..+....++.|+
T Consensus 74 ~~~~~~l~~~~~rva~~-~~~~~~~~~w~k~~ill~f~~~~~~~i~~~-~~~~~~dkv~~k~~~~~~~~~~~~~~~I~p~ 151 (316)
T 3tk8_A 74 AHAIEQLDRGALRVAEK-IDGAWTVHQWLKKAVLLSFRLEDNAPMPAG-GYSQFYDKVPSKFANYTAEDFAAGGFRVVPP 151 (316)
T ss_dssp HHHHHHHHTTSSCSEEE-ETTEEEECHHHHHHHHHHHHTCCCEEEEBS-BSCEEEESSCBTTTTCCHHHHHHHCCEECTT
T ss_pred HHHHHHHHhCCCEEeee-ccchHHHHHHHHHHHHHhhhhcccccccCC-CceeeEecccchhcccChhheecCCcEEeCC
Confidence 56666666656677777 444443 3334444433333322221 112444442 112223444454
Q ss_pred ceeecccccceEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc-
Q 010006 390 SKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR- 468 (520)
Q Consensus 390 ~~i~~~~i~~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~- 468 (520)
+.+. .++.||++|+|++ ++|+.++.||++|.|...+.+++ .+.||+++ .|+.++.|.+
T Consensus 152 a~I~----~~~~IG~g~~I~~-----~~I~~g~~IG~~~~I~~~~~Ig~---------~~~IG~~v---~I~~~~~I~~~ 210 (316)
T 3tk8_A 152 AIAR----RGSFIAKNVVLMP-----SYTNIGAYVDEGTMVDTWATVGS---------CAQIGKNV---HLSGGVGIGGV 210 (316)
T ss_dssp CEEB----TTCEECTTCEECS-----EEECTTCEECTTCEECTTEEECT---------TCEECTTC---EECTTCEECCC
T ss_pred eEEe----CCcEEcCCCEECC-----CEEeCCCEECCCCEEccceEECC---------CCEECCCC---EEcCCCEECCC
Confidence 4433 2344444444443 35555666666666655444442 23344444 4555555544
Q ss_pred --------eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCC-------EeCCCcc
Q 010006 469 --------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDA-------LIPSGTI 519 (520)
Q Consensus 469 --------~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~-------~i~~gtv 519 (520)
++||++|.||.+++|..+..+++++.++.|++|..+ +.|++.+ .||+|++
T Consensus 211 ~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgagsvV~~~-t~I~d~~~~~v~~g~Vp~gsv 275 (316)
T 3tk8_A 211 LEPLQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGVYLGQS-TKIYDRETGEVTYGRIPAGSV 275 (316)
T ss_dssp CSSTTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CCEEETTTCCEECSEECTTEE
T ss_pred cccccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCCEEcCC-eeecccccccccccEeCCCCE
Confidence 666666666666666655555555555555555555 4444444 5555554
No 86
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.33 E-value=8e-12 Score=123.37 Aligned_cols=117 Identities=15% Similarity=0.176 Sum_probs=58.3
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCcc---ccccccccccccCCCcceeeCCCCEEc-------
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADY---YETDADRRFLAAKGSVPIGIGKNSHIK------- 467 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~Ig~~~~i~------- 467 (520)
++|++++.|++ |.|. +++|..++.||++|.|...+.++..- --......+.||+++ .|+++++|.
T Consensus 26 ~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~---~I~~~~~I~~~~~~~~ 102 (270)
T 1j2z_A 26 CVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDN---LIREFCMINPGTEGGI 102 (270)
T ss_dssp CEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSC---EECTTCEECCCCTTTT
T ss_pred CEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCC---EECCCeEEcCCeecCC
Confidence 44444444444 4443 34444444445555554444443210 000111345555555 566666654
Q ss_pred -ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 468 -RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 468 -~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.++||+++.|+.++.|.....+++.+.++.++.|..+ ++||+++.|+++++|
T Consensus 103 ~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~-v~Igd~~~Ig~~a~V 155 (270)
T 1j2z_A 103 KKTLIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGH-IEIGDYVNIGGLTAI 155 (270)
T ss_dssp SEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred ccEEECCCcEECcccccCCCcEECCCcEEcCCccccCc-cEECCCeEEecCCEE
Confidence 3556666666666655554555555555555555555 666666666666553
No 87
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.33 E-value=1.9e-11 Score=129.74 Aligned_cols=212 Identities=16% Similarity=0.169 Sum_probs=138.8
Q ss_pred ceEEEEEeCCCCCCCCccccCCCccceecC---CccchhHHHHHHhHhC--------C------CCeEEEEeccChhHHH
Q 010006 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLG---ANYRLIDIPVSNCLNS--------N------ISKIYVLTQFNSASLN 151 (520)
Q Consensus 89 ~~~aIILAaG~GtRl~PlT~~~pK~Llpv~---G~~plI~~~l~~l~~~--------g------i~~I~Iv~~~~~~~i~ 151 (520)
+|.+||||||.||||. ...||+|+||+ |+ |+|+++++.+... | |..+++.+.+..+.+.
T Consensus 103 kvavvlLaGG~GTRLg---~~~PK~l~~v~l~~gk-~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t~ 178 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRLG---SSAPKGCFNIELPSQK-SLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNATE 178 (486)
T ss_dssp CEEEEEEEESBCGGGT---CSSBGGGCBCCCTTCC-BHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHHH
T ss_pred CeEEEEEcCCccccCC---CCCCCccceecCCCCC-cHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHHH
Confidence 6999999999999995 67899999998 76 9999999999876 6 7778788888889999
Q ss_pred HHHHHhhhccCCCC----cCCCeEEEeeccc--C----CCCCC-CccCcHHHHHHHH-----HHhhhcCcceEEEEeCce
Q 010006 152 RHLSRAYASNMGGY----KNEGFVEVLAAQQ--S----PENPN-WFQGTADAVRQYL-----WLFEEHNVLEFLVLAGDH 215 (520)
Q Consensus 152 ~~l~~~~~~~~~~~----~~~~~v~vl~~~~--~----~~~~~-~~~Gt~~al~~~~-----~~l~~~~~~~~Lvl~gD~ 215 (520)
+|+++...+++... |....+..+.... - +.... .+.|+++.+.... +.+...+.+.+.+...|.
T Consensus 179 ~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN 258 (486)
T 2yqc_A 179 SFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDN 258 (486)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTB
T ss_pred HHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCC
Confidence 99988544443211 1111111111100 0 00001 1468888776442 233334668899999998
Q ss_pred ecc--ccHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEeCC-CC--CEEEeeeCCChhhhhhcccccccccCCchhh
Q 010006 216 LYR--MDYERFIQAHRETDADITVAALPMDEKRATAFGLMKIDE-EG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERA 290 (520)
Q Consensus 216 l~~--~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d~-~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~ 290 (520)
+.- .| ..++..|.++++++++.+.+... .....|++.... +| +|++|.|+|....... +.. ...
T Consensus 259 ~l~~~~D-p~~lg~~~~~~~~~~~~vv~k~~-~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~---~~~------~~~ 327 (486)
T 2yqc_A 259 CLVKVAD-PIFIGFAIAKKFDLATKVVRKRD-ANESVGLIVLDQDNQKPCVIEYSEISQELANKK---DPQ------DSS 327 (486)
T ss_dssp TTCCTTC-HHHHHHHHHHTCSEEEEEEECCS-TTCCCCEEEEETTTTEEEEECGGGSCHHHHHCE---ETT------EEE
T ss_pred ceeeccC-HHHHHHHHHcCCCEEEEEEEcCC-CCCceeEEEEEecCCCEEEEEEecCCHHHhhcc---ccc------ccc
Confidence 433 45 34788888999999988877532 235677776531 34 5888889886532210 000 000
Q ss_pred ccCCceeeeeEEEEeHHHHHHHHhh
Q 010006 291 KEMPYIASMGIYVISKDVMLNLLRD 315 (520)
Q Consensus 291 ~~~~~l~~~GIyifs~~vl~~ll~~ 315 (520)
....+..++|+|+|+.++|.+++.+
T Consensus 328 ~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 328 KLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred cccccceeEEEEEEeHHHHHHHHHh
Confidence 1123578999999999999875554
No 88
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.32 E-value=8.9e-12 Score=123.03 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=66.9
Q ss_pred ccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEee---------------eEECCCCEECCCCEEcccEE
Q 010006 374 YDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIHH---------------SVVGLRSCISEGAIIEDTLL 435 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~~---------------s~Ig~~~~Ig~~~~I~~~~i 435 (520)
+.+.+.|...+.+.+++.+. ++.| .++.||++|.|++ |.|.+ ++||++|.|+++|.|...+.
T Consensus 11 I~~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~ 90 (273)
T 3fs8_A 11 IKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTI 90 (273)
T ss_dssp ECTTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCE
T ss_pred ECCCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCE
Confidence 33444444444444444433 2333 4466666666665 55552 66777777776666643333
Q ss_pred ECC-cccccccc--ccccccCCCcceeeCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEcc--------
Q 010006 436 MGA-DYYETDAD--RRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKS-------- 503 (520)
Q Consensus 436 ~~~-~~~~~~~~--~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~-------- 503 (520)
++. ......+. .++.||+++ .|+.++.|. +++|++++.||+++.|...+.+++.+.+..++.+..
T Consensus 91 Ig~~~~Ig~~~~I~~~~~Ig~~~---~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~~~i~~~~~i~~~~~~~~~~ 167 (273)
T 3fs8_A 91 IGDNFQTGHKVTIRENTKIGNNV---KIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDPTPPSNE 167 (273)
T ss_dssp ECTTCEECSSCEECSSCEECSSC---EECTTCEECSSCEECSSCEECTTCEECTTCEECTTCEECTTCEECCCSSSSCSC
T ss_pred ECCCCEECCceEECCCCEECCCC---EECccceeCCceEECCceEECCCCEECCCceeCCceeecCceEecCCCCCcccc
Confidence 332 11110000 123333333 334444443 444555555555555544444444444433333332
Q ss_pred --CeEEEcCCCEeCCCccC
Q 010006 504 --GIVTIIKDALIPSGTII 520 (520)
Q Consensus 504 --~~v~Ig~~~~i~~gtvi 520 (520)
+ ++||+++.|+++++|
T Consensus 168 ~~~-v~Ig~~~~IG~~~~I 185 (273)
T 3fs8_A 168 LLG-VTIELFAVIAARSVV 185 (273)
T ss_dssp CCC-CEECTTCEECTTCEE
T ss_pred cCC-cEECCCeEEcCCCEE
Confidence 3 667777777766653
No 89
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.32 E-value=7.2e-12 Score=125.89 Aligned_cols=144 Identities=12% Similarity=0.205 Sum_probs=74.8
Q ss_pred cccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcc-----cEEECCcccc-
Q 010006 373 FYDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIED-----TLLMGADYYE- 442 (520)
Q Consensus 373 ~~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~-----~~i~~~~~~~- 442 (520)
+++|.+.|.+.+.+.+++.+. .+.| .++.||++|+|++ +.|. ++.||++|.|++++.|.. +.+.++....
T Consensus 9 ~I~p~A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~d~~g~~~IG~~~~Ig~ 88 (305)
T 3t57_A 9 LIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVVGDELPGYTFIGCNNIIGH 88 (305)
T ss_dssp CBCTTSEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEECCSSSEEEEECSSCEECT
T ss_pred eECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEeccCCCCceEECCceEECC
Confidence 344555555445555444443 2333 4677788888876 7666 677777777777777653 2222211100
Q ss_pred --------------ccccccccccCCCcceeeCCCCEEc-------ceEECCCCEECCCcEEecCCCcCCcccccCCeEE
Q 010006 443 --------------TDADRRFLAAKGSVPIGIGKNSHIK-------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFI 501 (520)
Q Consensus 443 --------------~~~~~~~~~~~~~~~~~Ig~~~~i~-------~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I 501 (520)
......+.||+++ .|+++++|. .++||+++.|+.++.|.....+++.+.++.++.+
T Consensus 89 ~a~Ig~~~q~~~~~~~~~~~i~IG~~~---~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i 165 (305)
T 3t57_A 89 HAVVGVKCQDLKYKHGDECFLCIGNNN---EIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLL 165 (305)
T ss_dssp TCEEEECCCCTTCCTTCCEEEEECSSC---EECTTCEEECCSSTTCCEEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred ccEeCccccccceecCCCceEEECCCc---ccCceEEEeecccccCccEEccCccccceEEEeCceEeCCceEECCCccc
Confidence 0111223444444 344444442 2444555555555555444444444444444445
Q ss_pred ccCeEEEcCCCEeCCCccC
Q 010006 502 KSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 502 ~~~~v~Ig~~~~i~~gtvi 520 (520)
..+ |+||+++.|+++++|
T Consensus 166 ~g~-v~Igd~~~Ig~~~~V 183 (305)
T 3t57_A 166 AGH-VVVEDNTHTAGASVV 183 (305)
T ss_dssp CTT-CEECSSCEECTTCEE
T ss_pred CCC-CEECCceEEcCCCEE
Confidence 445 677777777766653
No 90
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.32 E-value=1e-11 Score=122.17 Aligned_cols=119 Identities=19% Similarity=0.181 Sum_probs=66.8
Q ss_pred cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccc---cccccccccccCCCcceeeCCCCEEc-----
Q 010006 398 TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYY---ETDADRRFLAAKGSVPIGIGKNSHIK----- 467 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~Ig~~~~i~----- 467 (520)
..++|++++.|++ |.|. +++|+.++.||++|.|...+.++.... -.....++.||+++ .|+++++|.
T Consensus 30 ~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~---~Ig~~~~I~~g~~~ 106 (265)
T 4e6u_A 30 PYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNN---LIREHCSLHRGTVQ 106 (265)
T ss_dssp TTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSC---EECTTCEEECCCTT
T ss_pred CCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCe---EECCceEECccccc
Confidence 4566666666666 6666 667777777777777776666532100 00111356666666 566666664
Q ss_pred ---ceEECC------------CCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 468 ---RAIIDK------------NARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 468 ---~~ii~~------------~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+++||+ +++||++|.|.+...+.++.++++++.|+.+ ++|.+++.||++++|
T Consensus 107 ~~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~-a~V~~~v~Ig~~~~i 173 (265)
T 4e6u_A 107 DNALTKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGN-SGIHQFCKIDSYSMI 173 (265)
T ss_dssp TTSEEEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTT-CEECTTCEECTTCEE
T ss_pred CCCceEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCC-CEECCCcEECCCCEE
Confidence 244444 4444445555555555555555555555555 555566666665543
No 91
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.31 E-value=1e-11 Score=118.08 Aligned_cols=128 Identities=22% Similarity=0.242 Sum_probs=92.7
Q ss_pred ccccCCCcCCCceeecccccceEECCCcEEee-eEEe-----eeEECCCCEECCCCEEccc---EEECCccccccccccc
Q 010006 379 PIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-----HSVVGLRSCISEGAIIEDT---LLMGADYYETDADRRF 449 (520)
Q Consensus 379 ~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-----~s~Ig~~~~Ig~~~~I~~~---~i~~~~~~~~~~~~~~ 449 (520)
.+...+.+.|.+.+. .++.||++|.|+. |.|. ++.||++|.|+++|.|... ..++.+-+ ...+
T Consensus 41 ~i~~~~~I~~~a~i~----~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~----~~~~ 112 (213)
T 3kwd_A 41 EIAPTAYVHSFSNLI----GDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQ----EYSV 112 (213)
T ss_dssp EECTTCEECTTSEEE----ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSC----EESE
T ss_pred cCCCCCEECCCCEEe----CceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCc----ccce
Confidence 344455555555554 4678888888887 7775 3799999999999999741 22232110 1356
Q ss_pred cccCCCcceeeCCCCEEcc-eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 450 LAAKGSVPIGIGKNSHIKR-AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 450 ~~~~~~~~~~Ig~~~~i~~-~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.||+++ .|++++.|.+ ++|+++|.||++++|.+ +.+++.+.++.++.| .+ ++|++++.|++|++|
T Consensus 113 ~IG~~v---~Ig~~~~I~~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V-~~-~~i~~~~~v~~~~vv 178 (213)
T 3kwd_A 113 WIGDNV---SITHMALIHGPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLI-QD-VEIPPGKYVPSGMVI 178 (213)
T ss_dssp EECTTC---EECTTCEEEEEEEECTTCEECTTCEEEE-EEECTTCEECSSCEE-ES-CEECTTBEECTTCEE
T ss_pred EECCCc---EECCCcEEcCCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEE-CC-cEeCCCCEECCCcEE
Confidence 777777 7999999985 99999999999999986 666666666666666 35 678999999998874
No 92
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.30 E-value=4e-12 Score=125.80 Aligned_cols=103 Identities=21% Similarity=0.367 Sum_probs=58.1
Q ss_pred eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc---------ceE
Q 010006 400 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK---------RAI 470 (520)
Q Consensus 400 ~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~---------~~i 470 (520)
+.|+++|.|++ ++|+.++.||++|.|...+.+++ .+.||+++ .|+.++.|. .++
T Consensus 117 ~~Ig~g~~I~~-----~~i~~~~~IG~~~~I~~~~~Ig~---------~~~IG~~v---~I~~~~~i~g~~~~~~~~~v~ 179 (276)
T 3gos_A 117 AFIARNTVLMP-----SYVNIGAFVDEGTMVDTWATVGS---------CAQIGKNV---HLSGGVGIGGVLEPLQANPTI 179 (276)
T ss_dssp CEECTTCEECS-----EEECTTCEECTTCEECTTEEECT---------TCEECTTC---EECTTCEECCCCSSTTSCCCE
T ss_pred CEECCCCEEcC-----CEEcCCeEECCCCEECCCCEECC---------CCEECCCC---EECCCCEECCccccCCCCCeE
Confidence 44444444443 24555555555555554444332 23444444 566666653 367
Q ss_pred ECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCC-------EeCCCccC
Q 010006 471 IDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDA-------LIPSGTII 520 (520)
Q Consensus 471 i~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~-------~i~~gtvi 520 (520)
||+||.||.+++|..+..+++.+.++.|++|..+ +.|++++ .||+++++
T Consensus 180 IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~-~~I~~~~~~~~~~g~Vp~~svv 235 (276)
T 3gos_A 180 IEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQS-TRIYDRETGEVHYGRVPAGSVV 235 (276)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CCEEETTTCCEECSEECTTEEE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCCEECCC-cEEccccccceeccccCCCcEE
Confidence 7777777777777666666666666666666666 5555555 66666653
No 93
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.28 E-value=1.8e-11 Score=114.50 Aligned_cols=105 Identities=14% Similarity=0.305 Sum_probs=83.9
Q ss_pred ceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc------ceE
Q 010006 399 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK------RAI 470 (520)
Q Consensus 399 ~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~------~~i 470 (520)
.+.|+++|.|.+ +.|. ++.||++|.|+++|.|.... .++.||+++ .|++++.|. +++
T Consensus 33 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~------------~~i~IG~~~---~I~~~~~I~~~~~~g~~~ 97 (191)
T 3ixc_A 33 SPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDV------------DKIEVGEGT---NIQDNTVVHTDSMHGDTV 97 (191)
T ss_dssp CCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEE------------EEEEECTTC---EECTTCEECC----CCEE
T ss_pred CCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCC------------CCeEECCCC---EECCCCEEeecCCcCCeE
Confidence 356667777766 5555 78899999999999997432 123444455 789999987 899
Q ss_pred ECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 471 IDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 471 i~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
|++++.||+++.|.+ ..+++.++++.++.|.++ ++||++++|++|++|
T Consensus 98 Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~gsvV 145 (191)
T 3ixc_A 98 IGKFVTIGHSCILHA-CTLGNNAFVGMGSIVMDR-AVMEEGSMLAAGSLL 145 (191)
T ss_dssp ECTTCEECTTCEECS-CEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred ECCCCEECCCCEEEC-CEECCCCEECCCCEEeCC-eEECCCCEECCCCEE
Confidence 999999999999865 788888899999999998 899999999999875
No 94
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.28 E-value=1.7e-10 Score=118.75 Aligned_cols=209 Identities=13% Similarity=0.122 Sum_probs=139.6
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceec---CCccchhHHHHHHhHh-------------CCCCeEEEEeccChhHHH
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPL---GANYRLIDIPVSNCLN-------------SNISKIYVLTQFNSASLN 151 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv---~G~~plI~~~l~~l~~-------------~gi~~I~Iv~~~~~~~i~ 151 (520)
.++.+|+||||.||||+ ...||+|+|| .|+ |+++++++.+.+ .+|.-++....+..+.+.
T Consensus 34 gkvavvlLAGG~GTRLG---~~~PK~~~~Vgl~~gk-s~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 34 GKTALITPAGGQGSRLG---FEHPKGMFVLPFEIPK-SIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp TCEEEEEECCSBCTTTT---CCSBGGGCEECSSSCE-EHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred CceEEEEecCCCccccc---CCCCCccccccCCCCC-cHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 47999999999999996 4799999999 776 999999998853 567766666678889999
Q ss_pred HHHHHhhhccCCCC----cCCCeEEEeeccc-----CCCCCCC-ccCcHHHHHHHH-----HHhhhcCcceEEEEeCce-
Q 010006 152 RHLSRAYASNMGGY----KNEGFVEVLAAQQ-----SPENPNW-FQGTADAVRQYL-----WLFEEHNVLEFLVLAGDH- 215 (520)
Q Consensus 152 ~~l~~~~~~~~~~~----~~~~~v~vl~~~~-----~~~~~~~-~~Gt~~al~~~~-----~~l~~~~~~~~Lvl~gD~- 215 (520)
+++++...|++... |....+..+.... .+....| +.|+++.+.... +.+.....+++++.+.|.
T Consensus 110 ~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN~ 189 (405)
T 3oc9_A 110 NYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNI 189 (405)
T ss_dssp HHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTBT
T ss_pred HHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCCc
Confidence 99998554544210 0111111110000 0000112 367777666432 223334567899999999
Q ss_pred eccccHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEe-CCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCC
Q 010006 216 LYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMP 294 (520)
Q Consensus 216 l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~-d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (520)
|.......++..|.++++++++-+.+.... ....|.++. |...+|+++.|.|.. .... ..+ ....-
T Consensus 190 L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~~-dek~Gvl~~~dg~~~vvEysei~~e-~e~~-~~~----------g~l~f 256 (405)
T 3oc9_A 190 LCKDVDPNMIGYMDLLQSEICIKIVKKGFK-EEKVGVLVKEQERIKVVEYTELTDE-LNKQ-LSN----------GEFIY 256 (405)
T ss_dssp TCCSSCHHHHHHHHHTTCSEEEEEEECCST-TCSCCEEEEETTEEEEECGGGCCTT-TTCB-CTT----------SCBSS
T ss_pred ccccCCHHHHHHHHHcCCCEEEEEEECCCC-CCccceEEEECCeeEEEEEeeCCHH-Hhhc-CCC----------Cceee
Confidence 888888889999999999999888875431 256777764 544589999888876 2110 000 00112
Q ss_pred ceeeeeEEEEeHHHHHHHH
Q 010006 295 YIASMGIYVISKDVMLNLL 313 (520)
Q Consensus 295 ~l~~~GIyifs~~vl~~ll 313 (520)
+..+.++++|+.++|.++.
T Consensus 257 n~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 257 NCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp CEEEEEEEEEEHHHHHHHT
T ss_pred ccceeEeeecCHHHHHHhh
Confidence 3567889999999998876
No 95
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.27 E-value=1e-11 Score=131.95 Aligned_cols=98 Identities=14% Similarity=0.221 Sum_probs=62.9
Q ss_pred cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCcccccccc-ccccccCCCcceeeCCCCEEc-------
Q 010006 398 TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDAD-RRFLAAKGSVPIGIGKNSHIK------- 467 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~Ig~~~~i~------- 467 (520)
.+++||++|.|++ |.|. +++||.+|.||++|.|.++++..++....... ..+.||+++ .||.++.+.
T Consensus 324 ~~~~Ig~~~~Ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~Ig~~~~i~~~~~i~~~~Ig~~~---~Ig~~~~i~~~~~~~~ 400 (468)
T 1hm9_A 324 EESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNV---NFGAGTITVNYDGKNK 400 (468)
T ss_dssp ESCEECTTCEECSSCEECSSCEECTTCEEEEEEEEESCEECTTCEEEEEEEEESEEECTTC---EECTTCEEECBCSSCB
T ss_pred eccccCCCcEECCceEEecCcEECCccEECCCcEEeeeEEcCCcEeCCceEEccccccCCc---EECCCcEEecCcCccC
Confidence 3456666667776 6666 67777777777777777666655432211111 345677777 677777774
Q ss_pred -ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 468 -RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 468 -~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
.++||++|.||.++.|.+ .+++|++++|+++
T Consensus 401 ~~~~Ig~~~~Ig~~~~i~~------~v~Ig~~~~i~~~ 432 (468)
T 1hm9_A 401 YKTVIGDNVFVGSNSTIIA------PVELGDNSLVGAG 432 (468)
T ss_dssp CCEEECTTCEECTTCEEES------SCEECTTCEECTT
T ss_pred CCcEECCCeEECCCCEEeC------CcEECCCCEECCC
Confidence 377777777777777765 3456666767766
No 96
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.27 E-value=1.8e-11 Score=115.59 Aligned_cols=33 Identities=21% Similarity=0.307 Sum_probs=20.8
Q ss_pred ceEECCCcEEee-eEEe-eeEECCCCEECCCCEEc
Q 010006 399 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIE 431 (520)
Q Consensus 399 ~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~ 431 (520)
++.||++|.|++ |.|. ++.||++|.|+++|.|.
T Consensus 52 ~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~ 86 (205)
T 3vbi_A 52 VISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALY 86 (205)
T ss_dssp GEEECSSEEECTTCEEEEEEEECSSEEECTTCEEE
T ss_pred eeEECCCCEECCCCEEccceEECCCCEECCCeEEE
Confidence 455666666665 5555 56667777777766663
No 97
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.26 E-value=2.5e-11 Score=122.84 Aligned_cols=125 Identities=12% Similarity=0.057 Sum_probs=65.4
Q ss_pred cccC-CCccccCCCcCCCceeecccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccc--ccc
Q 010006 373 FYDR-SAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDA--DRR 448 (520)
Q Consensus 373 ~~~~-~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~--~~~ 448 (520)
++++ ++.+..++.+.|++.+. .+++|+++|.|++ |.|.+|+||+++.|+++++|+++++.+++..-..+ ..+
T Consensus 60 ~I~~~~a~I~~~a~I~~~~~I~----g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~ 135 (334)
T 2pig_A 60 WIYDENAMAFAGTEITGNARIT----QPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQ 135 (334)
T ss_dssp EECCTTCEEETTCEECTTCEEE----SSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESS
T ss_pred EEcCCCeEEcCCcEECCCcEEe----eeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCC
Confidence 3444 45555555555555554 4567777777776 77777777777777777777777666554211111 112
Q ss_pred ccccCC-------CcceeeCCCCEEcceEECCCCEECCCcEEecCCCcCCcccccCCeEEc
Q 010006 449 FLAAKG-------SVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIK 502 (520)
Q Consensus 449 ~~~~~~-------~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~ 502 (520)
+.+..+ ...+.|+++++|.+++|+++|+|+.+++|. .+.+.+.+.+++++.+.
T Consensus 136 s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~-~svI~~~a~I~~~a~V~ 195 (334)
T 2pig_A 136 SEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATIT-HAFIEHRAEVFDFALIE 195 (334)
T ss_dssp CEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEE-SEEECTTCEECTTCEEE
T ss_pred EEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEe-CcEEcCCCEECCCcEEC
Confidence 222111 011245555555555555555555555554 23334444444444433
No 98
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.26 E-value=8.7e-12 Score=132.01 Aligned_cols=134 Identities=15% Similarity=0.171 Sum_probs=71.2
Q ss_pred cccCCCccccCCCcCCCceee-cccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEc------------------c
Q 010006 373 FYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIE------------------D 432 (520)
Q Consensus 373 ~~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~------------------~ 432 (520)
++.+.+.|...+.+.+++.+. ++.|.++.||++|.|+. |.|.++.||++|.||++|.|. +
T Consensus 276 ~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~ 355 (459)
T 4fce_A 276 TIDTNVIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKK 355 (459)
T ss_dssp EECTTEEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEE
T ss_pred EECCCeeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEee
Confidence 344444443334444444443 33344566666666665 655555555555555555443 2
Q ss_pred cEEECCcccccccc-ccccccCCCcceeeCCCCEEc--------ceEECCCCEECCCcEEecCCCcCCcccccCCeEEcc
Q 010006 433 TLLMGADYYETDAD-RRFLAAKGSVPIGIGKNSHIK--------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKS 503 (520)
Q Consensus 433 ~~i~~~~~~~~~~~-~~~~~~~~~~~~~Ig~~~~i~--------~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~ 503 (520)
+.+..+........ ..+.+|+++ .||.++.+. .++||++|.||.+++|.. +++||++++|++
T Consensus 356 ~~i~~~~~i~~~~~i~~~~Ig~~~---~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~------gv~Ig~~~~iga 426 (459)
T 4fce_A 356 ARLGKGSKAGHLSYLGDAEIGAGV---NIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVA------PVTVANGATIGA 426 (459)
T ss_dssp EEECTTCEEEEEEEEEEEEECTTC---EECTTCEEECBCSSCBCCEEECTTCEECTTCEEES------SEEECTTCEECT
T ss_pred eEEcCCCEECCceEECCeEECCCC---EECCCCEEeccccccCCCCEECCCeEEcCCCEEcC------CcEECCCCEECC
Confidence 22222211111111 345777777 677777764 367777777777777764 556666777777
Q ss_pred CeEEEcCCCEeCCCc
Q 010006 504 GIVTIIKDALIPSGT 518 (520)
Q Consensus 504 ~~v~Ig~~~~i~~gt 518 (520)
| .+|-++ |++++
T Consensus 427 g-svV~~~--v~~~~ 438 (459)
T 4fce_A 427 G-TTVTRD--VAENE 438 (459)
T ss_dssp T-CEECSC--BCTTC
T ss_pred C-CEEccc--cCCCC
Confidence 7 444333 34444
No 99
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.24 E-value=4.9e-11 Score=109.63 Aligned_cols=104 Identities=18% Similarity=0.292 Sum_probs=81.0
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-----ceEEC
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-----RAIID 472 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~ii~ 472 (520)
..|++++.|.+ +.|. ++.||++|.|+++|.|.... ..+.||+++ .|++++.|. +++|+
T Consensus 13 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~------------~~v~IG~~~---~I~~~~~I~~~~~~~~~Ig 77 (173)
T 1xhd_A 13 PKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDV------------SPTIIGDRV---NVQDQCTLHQSPQYPLILE 77 (173)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEE------------EEEEECTTC---EECTTCEEECCTTCCEEEC
T ss_pred CEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCC------------CeEEECCCC---EECCCCEEEeCCCCCeEEC
Confidence 45666666665 5554 78999999999999987641 123344455 789999997 79999
Q ss_pred CCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 473 KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+++.||.++.|.+ ..+++.++++.++.|.++ ++||++++|++|++|
T Consensus 78 ~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~-~~Ig~~~~Ig~~s~V 123 (173)
T 1xhd_A 78 DDVTVGHQVILHS-CHIKKDALIGMGSIILDG-AEIGEGAFIGAGSLV 123 (173)
T ss_dssp TTCEECTTCEEES-CEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred CCCEECCCCEEeC-CEECCCCEEcCCCEEcCC-CEECCCCEECCCCEE
Confidence 9999999999864 677888888888888888 889999999988864
No 100
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.22 E-value=6.4e-11 Score=110.07 Aligned_cols=104 Identities=16% Similarity=0.237 Sum_probs=82.8
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEE-----------
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHI----------- 466 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i----------- 466 (520)
..|++++.|.+ +.|. ++.||++|.|+++|.|.... ..+.||+++ .|++++.|
T Consensus 16 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~------------~~i~IG~~~---~I~~~~~I~~~~~~~~~~~ 80 (187)
T 3r3r_A 16 PGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDV------------NYVAIGART---NIQDGSVLHVTHKSSSNPH 80 (187)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEE------------EEEEECTTC---EECTTCEEECBCCBTTBC-
T ss_pred cccCCCeEECCCCEEECceEECCCCEECCCcEEEcCC------------ccEEECCCC---EECCCCEEecCCccccCCC
Confidence 45666666665 5554 78999999999999887543 123344455 78999998
Q ss_pred -cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 467 -KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 467 -~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.+++|++++.||.++.|.+ ..+++.++++.++.|..+ ++||++++|++|++|
T Consensus 81 ~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~I~~~-~~Ig~~~~Ig~~s~V 133 (187)
T 3r3r_A 81 GNPLIIGEDVTVGHKVMLHG-CTIGNRVLVGMGSIVLDG-AIIEDDVMIGAGSLV 133 (187)
T ss_dssp CBCEEECSSCEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred CCCeEECCCCEECCCCEEeC-cEECCCCEECCCCEECCC-CEECCCCEECCCCEE
Confidence 6899999999999999965 788888999999999888 899999999999875
No 101
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.21 E-value=1.5e-10 Score=119.54 Aligned_cols=130 Identities=19% Similarity=0.195 Sum_probs=64.2
Q ss_pred ccCCCccccCCCcCCCceeecccccceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccc
Q 010006 374 YDRSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLA 451 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~ 451 (520)
+.+.+.+...+.+.+++.+. .+++|+++|.|++ |.|. +++||.+|.||++|.|...+.++ .++.|
T Consensus 127 i~~~~~i~~~a~Ig~~~~I~----~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~---------~~~~I 193 (374)
T 2iu8_A 127 IHPTAVIHPTAIIEDHVCIE----PYAVVCQHAHVGSACHIGSGSVIGAYSTVGEHSYIHPRVVIR---------ERVSI 193 (374)
T ss_dssp BCTTCEECTTCEECTTCEEC----TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC---------SSEEE
T ss_pred cCCCCEECCCcEECCCCEEC----CCCEECCCCEECCCCEECCCcEECCCcEECCceeeCCCcEEc---------ccceE
Confidence 44444444444555544443 3344444444444 4444 45555555555555555333332 13444
Q ss_pred cCCCcceeeCCCCEEc---------------------ceEECCCCEECCCcEEe----------------cCCCcCCccc
Q 010006 452 AKGSVPIGIGKNSHIK---------------------RAIIDKNARIGDNVKIV----------------NSDSVQEAAR 494 (520)
Q Consensus 452 ~~~~~~~~Ig~~~~i~---------------------~~ii~~~~~Ig~~~~i~----------------~~~~v~~~~~ 494 (520)
|+++ .|++++.|. .++|+++|.||+|++|. +...+..+++
T Consensus 194 G~~~---~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~~~v~ 270 (374)
T 2iu8_A 194 GKRV---IIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIAHQVE 270 (374)
T ss_dssp CTTC---EECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEECTTCE
T ss_pred CCCC---EECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEccCcccceeECCCcEECCccccCCccE
Confidence 4444 455555542 26666666666666653 2333344445
Q ss_pred ccCCeEEccC-----eEEEcCCCEeCCCcc
Q 010006 495 ETDGYFIKSG-----IVTIIKDALIPSGTI 519 (520)
Q Consensus 495 ~~~~~~I~~~-----~v~Ig~~~~i~~gtv 519 (520)
+|++++|..+ .++||+++.|+.++.
T Consensus 271 IG~~~~i~~~~~v~~~~~Ig~~~~Ig~~~~ 300 (374)
T 2iu8_A 271 VGQHSMIVAQAGIAGSTKIGNHVIIGGQAG 300 (374)
T ss_dssp ECTTCEECTTCEECTTCEECSSCEECTTCE
T ss_pred ECCCCEEccCcccCCCcEECCCeEEecCcE
Confidence 5555554443 145666666655553
No 102
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.20 E-value=1e-10 Score=109.49 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=76.3
Q ss_pred cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc--------
Q 010006 398 TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-------- 467 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-------- 467 (520)
+++.|+++++|.+ |.|. +..||++|.|+++|.|... ..++.||+++ .|++++.|.
T Consensus 11 ~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~------------~g~i~IG~~~---~I~~~~~I~~~~~~~~~ 75 (194)
T 3tv0_A 11 KSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAE------------AGPIVIGEGN---LIEEQALIINAYPDNIT 75 (194)
T ss_dssp -CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEES------------SSCEEECTTC---EECTTCEEEECCCSCC-
T ss_pred CCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccC------------CCCeEECCCc---cccCCcccccccccccc
Confidence 3456666666665 5554 6677777777777776421 0234455555 566666663
Q ss_pred ---------ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 468 ---------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 468 ---------~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.++|++++.|+.++.+. ...+++.++++.++.|+.+ |+||++|+|++|++|
T Consensus 76 ~~~~~~~~~~~~Ig~~~~i~~~~~i~-~~~Ig~~~~Ig~~~~I~~g-v~IG~~~~IgagsvV 135 (194)
T 3tv0_A 76 PDTEDPEPKPMIIGTNNVFEVGCYSQ-AMKMGDNNVIESKAYVGRN-VILTSGCIIGACCNL 135 (194)
T ss_dssp --------CCEEECSSCEECTTCEEC-CSEECSSCEECTTCEECTT-EEECSSCEECTTCEE
T ss_pred cccccCcCCceEECCcceEecceeEe-eeeecccceecceeeECCe-EEECCCCEECCCCEE
Confidence 46888888888888885 4678888899999999999 999999999999875
No 103
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.20 E-value=3.8e-11 Score=120.15 Aligned_cols=66 Identities=18% Similarity=0.200 Sum_probs=28.0
Q ss_pred eEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCCCEECCCcEEec
Q 010006 416 SVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 416 s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~ 485 (520)
++||.+|.||++|.|..++.+++.. +......+.||+++ .||.++.|. +++||++|.||++++|..
T Consensus 171 ~~Ig~~~~IG~~v~I~~~~~i~~~~-~~~~~~~v~IGd~v---~IG~~a~I~~gv~IG~~avIgagsvV~~ 237 (304)
T 3eg4_A 171 ATVGSCAQIGKNVHLSGGVGIGGVL-EPMQAGPTIIEDNC---FIGARSEVVEGCIVREGSVLGMGVFIGK 237 (304)
T ss_dssp EEECTTCEECTTCEECTTCEECCCC-SSTTCCCCEECTTC---EECTTCEECTTCEECTTCEECTTCEECT
T ss_pred cEECCCCccCCCcEECCCCEECCcc-ccCccCCeEEcCCC---EECCCCEEcCCcEECCCcEECCCCEEcC
Confidence 4555555555555554444443311 11111234444444 444444332 444444444444444443
No 104
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.20 E-value=8.8e-11 Score=109.26 Aligned_cols=104 Identities=13% Similarity=0.227 Sum_probs=81.5
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc---------
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR--------- 468 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~--------- 468 (520)
..|++++.|.+ +.|. ++.||++|.|+++|.|.... ..+.||+++ .|++++.|..
T Consensus 20 ~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~------------~~i~IG~~~---~I~~~~~I~~~~~~~~~~~ 84 (189)
T 3r1w_A 20 PKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDM------------HHIRIGART---SVQDGSVLHITHASDYNPG 84 (189)
T ss_dssp CEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEE------------EEEEECTTC---EECTTCEEECBCCSSSSTT
T ss_pred CEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCC------------CceEECCCC---EECCCCEEecCCcccCCCC
Confidence 34666666665 5554 78999999999999886332 123344455 7888888865
Q ss_pred ---eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 469 ---AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 469 ---~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
++|++++.||.++.|.+ ..+++.++++.++.|..+ ++||++++|++|++|
T Consensus 85 ~~~~~Ig~~~~Ig~~~~i~~-~~Ig~~~~Ig~~~~i~~~-v~Ig~~~~Ig~~s~V 137 (189)
T 3r1w_A 85 GYPLIIGDDVTIGHQAMLHG-CTIGNRVLIGMKSMIMDG-AIVEDEVIVAAGATV 137 (189)
T ss_dssp CBCEEECSSEEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSCEECTTCEE
T ss_pred CCCeEECCCCEECCCCEEeC-cEECCCcEECCCCEEcCC-CEECCCCEEccCCEE
Confidence 49999999999999976 788899999999999988 999999999999875
No 105
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.19 E-value=9.3e-11 Score=114.52 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=75.2
Q ss_pred cceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc----ceEEC
Q 010006 398 TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK----RAIID 472 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~----~~ii~ 472 (520)
.++.|++++.|.. +.+.... ...+.||++|.|.+.+.+.. ..++.||+++ .|++++.|. +++||
T Consensus 62 ~~v~I~~~~~i~~~~~i~~g~-~~~v~Ig~~~~I~~~~~i~~-------g~~v~IG~~~---~Ig~~~~I~~~~~~~~IG 130 (252)
T 3jqy_B 62 NKLIIEDDVECRWLTVIFRGD-NNYVRIHKNSKIKGDIVATK-------GSKVIIGRRT---TIGAGFEVVTDKCNVTIG 130 (252)
T ss_dssp CEEEECTTCEEEEEEEEEESS-SCEEEECTTCEEEEEEEEES-------SCEEEECTTC---EECTTCEEECSSSEEEEC
T ss_pred CEEEEcCCcEEecceEEEeCC-CCeEEECCCCEECCceEEcc-------CCEEEECCCC---EECCCcEEEeCCCCeEEC
Confidence 5588888888886 4441000 22334444444444443321 1355677777 789999988 89999
Q ss_pred CCCEECCCcEEecC-------------------CCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 473 KNARIGDNVKIVNS-------------------DSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~-------------------~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
++|.||++|+|.+. ..+++.+++|.++.|.++ ++||++++|++|++|
T Consensus 131 ~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~g-v~IG~~~~IgagsvV 196 (252)
T 3jqy_B 131 HDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKG-VSVGSGSVIGYGSIV 196 (252)
T ss_dssp TTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTT-CEECTTCEECTTCEE
T ss_pred CCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCC-CEECCCCEECCCCEE
Confidence 99999999999886 345666667777777777 888888888888875
No 106
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.18 E-value=5.3e-11 Score=112.43 Aligned_cols=101 Identities=13% Similarity=0.130 Sum_probs=64.5
Q ss_pred EECCCcEEee-eEEe---eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc----ceEEC
Q 010006 401 VIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK----RAIID 472 (520)
Q Consensus 401 ~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~----~~ii~ 472 (520)
.||+++.|+. +.|. +..||++|.|+++|.|...+.+++ + +.|++++.|. +++||
T Consensus 34 ~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~---------------~---~~I~~~~~I~~~~~~~~IG 95 (205)
T 3vbi_A 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGS---------------Y---SHIAAYTALYGGEVGIEMY 95 (205)
T ss_dssp EECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECS---------------S---EEECTTCEEEEEEEEEEEC
T ss_pred EECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECC---------------C---CEECCCeEEEcCCccEEEC
Confidence 3444444444 3333 467777777777777765555553 2 3677777773 37778
Q ss_pred CCCEECCCcEE-------------------------ecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 473 KNARIGDNVKI-------------------------VNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 473 ~~~~Ig~~~~i-------------------------~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
++|.||++|+| .....+++.+++|.++.|..+ ++||++++|++|++|
T Consensus 96 ~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g-v~Ig~~~~Ig~gsvV 167 (205)
T 3vbi_A 96 DFANISSRTIVYAAIDDFSGNALMGPTIPNQYKNVKTGKVILKKHVIIGAHSIIFPN-VVIGEGVAVGAMSMV 167 (205)
T ss_dssp TTCEECTTCEEESEECCCSSSSCCSTTSCGGGCCCEECCEEECTTCEECTTCEECSS-CEECTTCEECTTCEE
T ss_pred CCCEECCCcEEEeCCCCcccccccCcccccccceeccCCEEECCCCEECCCCEEcCC-CEECCCCEEcCCCEE
Confidence 88888888777 234455566666666666666 677777777777664
No 107
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.18 E-value=1.1e-10 Score=118.21 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=65.4
Q ss_pred ccCCCccccCCCcCCCceee-cccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEccc-EEECCcccccccc----
Q 010006 374 YDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDT-LLMGADYYETDAD---- 446 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~-~i~~~~~~~~~~~---- 446 (520)
+++.+.|...+.+.+++.+. ++.|.+++|+++|.|++ +.|.+++|+.+|.|+.++++.+. .++++.-+..+..
T Consensus 74 I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~ 153 (334)
T 2pig_A 74 ITGNARITQPCTLYNNVRIGDNVWIDRADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQ 153 (334)
T ss_dssp ECTTCEEESSCEEESSCEECTTCEEESCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEE
T ss_pred ECCCcEEeeeeeECCCcEECCCCEEEeEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeE
Confidence 34444444444444444443 45667888888888886 88888888888888888766544 3433311111111
Q ss_pred -------ccccccCCCcceeeCCCCEEcceEECCCCEECCCcEEec
Q 010006 447 -------RRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 447 -------~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~ 485 (520)
..+.+++|+ .|+.++.|.+++|++++.|++++.+.+
T Consensus 154 I~~~a~I~~s~I~~g~---~I~~~a~I~~svI~~~a~I~~~a~V~~ 196 (334)
T 2pig_A 154 IYDRATVNHSRIVHQV---QLYGNATITHAFIEHRAEVFDFALIEG 196 (334)
T ss_dssp ECTTCEEESCEEETTC---EECTTCEEESEEECTTCEECTTCEEEC
T ss_pred ECCCCEEeccEEcCCC---EEcCCeEEeCcEEcCCCEECCCcEECC
Confidence 234555555 577777777777777777777766654
No 108
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.15 E-value=2.3e-10 Score=106.82 Aligned_cols=107 Identities=19% Similarity=0.282 Sum_probs=58.6
Q ss_pred ccCCCccccCCCcCCCceee-cccc-cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccc
Q 010006 374 YDRSAPIYTQPRYLPPSKML-DADV-TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRF 449 (520)
Q Consensus 374 ~~~~~~i~~~~~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~ 449 (520)
++|.+.|...+.+.+++.+. .+.| .++.||++|.|+. +.|. ++.||++|.|+++|.|.+.+.++
T Consensus 6 I~p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig------------ 73 (192)
T 3mqg_A 6 IHPTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLE------------ 73 (192)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEEC------------
T ss_pred ECCCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEEC------------
Confidence 44444444444444444443 1222 3466666666665 5444 35555555555555554444433
Q ss_pred cccCCCcceeeCCCCEE----------------cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 450 LAAKGSVPIGIGKNSHI----------------KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 450 ~~~~~~~~~~Ig~~~~i----------------~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
+++ .||+++.+ ..++|+++|.||.+++|.++. +++++++|+++
T Consensus 74 ---~~~---~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~------~Ig~~~~Igag 132 (192)
T 3mqg_A 74 ---DDV---FCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGA------TIGRYAFVGAG 132 (192)
T ss_dssp ---TTC---EECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTTC------EECTTCEECTT
T ss_pred ---CCC---EECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCCC------EECCCCEEcCC
Confidence 233 45555444 458888888888888887643 44445555555
No 109
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.15 E-value=2.3e-10 Score=105.17 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=75.4
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-----ceEEC
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-----RAIID 472 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-----~~ii~ 472 (520)
..|+++++|.+ +.|. ++.||++|.|+++|.|.... ..+.||+++ .|++++.|. +++|+
T Consensus 11 ~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~------------~~~~IG~~~---~I~~~~~I~~~~~~~~~Ig 75 (173)
T 1v3w_A 11 PRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDI------------EQIYVGKYS---NVQDNVSIHTSHGYPTEIG 75 (173)
T ss_dssp CEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEE------------EEEEECTTC---EECTTCEEECBTTBCEEEC
T ss_pred CEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCC------------ceEEECCCC---EECCCcEEEecCCCCeEEC
Confidence 34566666665 5444 78899999999999887530 123444455 788888887 58899
Q ss_pred CCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 473 KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+++.|+.++.|.+ ..+++.++++.++.|..+ ++||++++|++|++|
T Consensus 76 ~~~~I~~~~~i~~-~~Ig~~~~Ig~~~~i~~~-~~Ig~~~~Ig~~s~V 121 (173)
T 1v3w_A 76 EYVTIGHNAMVHG-AKVGNYVIIGISSVILDG-AKIGDHVIIGAGAVV 121 (173)
T ss_dssp SSCEECTTCEEES-CEECSSEEECTTCEECTT-CEECSSEEECTTCEE
T ss_pred CCCEECCCCEECC-CEECCCCEECCCCEEeCC-CEECCCCEECCCCEE
Confidence 9999888888854 667777777777777777 788888888887764
No 110
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.14 E-value=2.4e-10 Score=109.09 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=14.1
Q ss_pred ceEECCCcEEeeeEEeeeEECCCCEECCCCEEc
Q 010006 399 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIE 431 (520)
Q Consensus 399 ~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~ 431 (520)
++.|++||+|++ +++|+.++.||++|.|.
T Consensus 111 ~v~IG~g~~I~~----~~~i~~~~~IG~~~~I~ 139 (220)
T 4ea9_A 111 SVRLGEGVAVMA----GVAINADSWIGDLAIIN 139 (220)
T ss_dssp TCEECSSCEECT----TCEECTTCEECTTCEEC
T ss_pred CCEECCCCEEcC----CCEECCCCEECCCCEEC
Confidence 345666666664 33344444444444444
No 111
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.13 E-value=1.1e-10 Score=123.47 Aligned_cols=145 Identities=21% Similarity=0.242 Sum_probs=103.4
Q ss_pred ccccCCCccccCCCcCCCceee-cccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEEC-Ccccccccc-c
Q 010006 372 SFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMG-ADYYETDAD-R 447 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~-~~~~~~~~~-~ 447 (520)
.++.+.+.|...+.+..++.+. ++.|.+++||++|.|++ |.|.++.||++|.|+++|.|...+.++ ++.....++ .
T Consensus 272 ~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~ 351 (456)
T 2v0h_A 272 VEIDVNVIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIK 351 (456)
T ss_dssp CEECSSEEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEE
T ss_pred CEEcCCcEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEe
Confidence 3445555555555566666654 56667899999999998 999999999999999999998655544 333322222 3
Q ss_pred cccccCCCc--------ceeeCCCCEEc-ceEECC-------CCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCC
Q 010006 448 RFLAAKGSV--------PIGIGKNSHIK-RAIIDK-------NARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKD 511 (520)
Q Consensus 448 ~~~~~~~~~--------~~~Ig~~~~i~-~~ii~~-------~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~ 511 (520)
++.+++++. ++.||+++.|. +++|.. +++||++|+|+..+.+..+.+++++++|+.+ .+|.++
T Consensus 352 ~~~i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~-s~v~~~ 430 (456)
T 2v0h_A 352 KSTVGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAG-TTITRD 430 (456)
T ss_dssp SCEECTTCEEEEEEEEESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTT-CEECSC
T ss_pred ccEECCCCEeccceeecCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCC-CEECCC
Confidence 455666642 35788888886 677654 8899999999988888988899999999999 555443
Q ss_pred CEeCCCcc
Q 010006 512 ALIPSGTI 519 (520)
Q Consensus 512 ~~i~~gtv 519 (520)
|+++++
T Consensus 431 --v~~~~~ 436 (456)
T 2v0h_A 431 --VGENEL 436 (456)
T ss_dssp --BCTTCE
T ss_pred --cCCCCE
Confidence 455543
No 112
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.11 E-value=1.2e-10 Score=116.51 Aligned_cols=96 Identities=24% Similarity=0.331 Sum_probs=63.3
Q ss_pred ceEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc---------e
Q 010006 399 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR---------A 469 (520)
Q Consensus 399 ~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~---------~ 469 (520)
++.||++|+|+ .++|+.++.||++|.|...+.+++ .+.||+++ .|+.++.|.+ +
T Consensus 141 ~v~Ig~g~~I~-----~~~I~~~~~IG~~~~I~~~~~Ig~---------~~~IG~~v---~I~~~~~i~~~~~~~~~~~v 203 (304)
T 3eg4_A 141 SAYIAPNAILM-----PSFVNLGAYVDKGAMIDTWATVGS---------CAQIGKNV---HLSGGVGIGGVLEPMQAGPT 203 (304)
T ss_dssp TCEECTTCEEC-----SEEECTTCEECTTCEECTTEEECT---------TCEECTTC---EECTTCEECCCCSSTTCCCC
T ss_pred CcEECCCCEEe-----CCEECCCCEECCCcEEcCCcEECC---------CCccCCCc---EECCCCEECCccccCccCCe
Confidence 34455555554 336777777777777776555553 34566666 6777777766 8
Q ss_pred EECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCC
Q 010006 470 IIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDA 512 (520)
Q Consensus 470 ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~ 512 (520)
+||++|.||.+|+|..+..+++++.++.|++|..+ ++|++++
T Consensus 204 ~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~g-~~Igd~~ 245 (304)
T 3eg4_A 204 IIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKS-TKIVDRA 245 (304)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CCEEETT
T ss_pred EEcCCCEECCCCEEcCCcEECCCcEECCCCEEcCC-eEECccc
Confidence 88888888888888777667776666667666666 4444443
No 113
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.10 E-value=2.9e-10 Score=110.06 Aligned_cols=70 Identities=24% Similarity=0.405 Sum_probs=35.3
Q ss_pred cceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc-------
Q 010006 398 TDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR------- 468 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~------- 468 (520)
.++.||++|+|+. +.|. ++.||++|.|+.+|.|.+.+ .||+++ .|++++.+.+
T Consensus 102 ~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~---------------~IG~~~---~I~~~~~i~~~~~~~~~ 163 (240)
T 3r8y_A 102 DHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRA---------------TVGKNC---HVGAGAVLAGVIEPPSA 163 (240)
T ss_dssp SSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTC---------------EECTTC---EECTTCEECCCCSCTTS
T ss_pred CCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCC---------------EECCCc---EECCCcEECCCccCCCC
Confidence 3455666666654 3332 34444444444444443222 233333 5666666654
Q ss_pred --eEECCCCEECCCcEEec
Q 010006 469 --AIIDKNARIGDNVKIVN 485 (520)
Q Consensus 469 --~ii~~~~~Ig~~~~i~~ 485 (520)
++|+++|.||.+++|..
T Consensus 164 ~~~~Ig~~~~IG~~~~I~~ 182 (240)
T 3r8y_A 164 KPVIVEDDVVIGANVVVLE 182 (240)
T ss_dssp CCCEECTTCEECTTCEECT
T ss_pred CCcEECCCCEECCCCEECC
Confidence 66666666666666643
No 114
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.10 E-value=3.3e-10 Score=107.62 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=73.3
Q ss_pred eEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc---------
Q 010006 400 SVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR--------- 468 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~--------- 468 (520)
..|+++++|.+ +.|. +..||++|.|+++|.|.... ..++.||+++ .|++++.|..
T Consensus 40 ~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~-----------~~~v~IG~~~---~Ig~~~~I~~~~~~~~ig~ 105 (213)
T 3kwd_A 40 PEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADE-----------GTPFHIGSRT---NIQDGVVIHGLQQGRVIGD 105 (213)
T ss_dssp CEECTTCEECTTSEEEESEEECTTCEECTTCEEEESS-----------SCCEEECTTC---EECTTCEEEECSSCCEECT
T ss_pred CcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCC-----------CCceEECCCC---EECCCCEEEecCCCceecc
Confidence 34555555554 4444 67888888888888886530 0123444455 6777777763
Q ss_pred ------eEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 469 ------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 469 ------~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
++||+++.||.++.|.+...+++.+++|.++.|. + ++||++++|++|++|
T Consensus 106 ~~~~~~~~IG~~v~Ig~~~~I~~~v~Ig~~v~IG~~a~I~-~-~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 106 DGQEYSVWIGDNVSITHMALIHGPAYIGDGCFIGFRSTVF-N-ARVGAGCVVMMHVLI 161 (213)
T ss_dssp TSCEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEE-E-EEECTTCEECSSCEE
T ss_pred CCcccceEECCCcEECCCcEEcCCCEECCCCEECCCCEEe-C-cEECCCCEEcCCCEE
Confidence 8888888888888887767777777777777776 3 778888888888864
No 115
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.07 E-value=5.5e-10 Score=116.09 Aligned_cols=113 Identities=16% Similarity=0.162 Sum_probs=73.5
Q ss_pred CcCCCceee-cccc-cceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeC
Q 010006 385 RYLPPSKML-DADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIG 461 (520)
Q Consensus 385 ~~~~~~~i~-~~~i-~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig 461 (520)
.+.+++.+. ++.| .+++||++|.|+. |.|.+++||+++.|++++.|+++++.++ +.||
T Consensus 264 ~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~-------------------~~Ig 324 (401)
T 2ggo_A 264 YIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAED-------------------VNFG 324 (401)
T ss_dssp EECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTT-------------------CEEC
T ss_pred EECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCC-------------------cEEC
Confidence 344444442 3445 4688999999998 8888899999999999999987777554 3566
Q ss_pred CCCEEcc---------eEEC----------CCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 462 KNSHIKR---------AIID----------KNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 462 ~~~~i~~---------~ii~----------~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
.++.|.+ +.++ .+++||++|+|..++.+.++.+++++++|++| .+|.++ |+++++
T Consensus 325 ~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~g-svv~~~--vp~~~~ 398 (401)
T 2ggo_A 325 AGTLIANLRFDEKEVKVNVKGKRISSGRRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPG-AVVNRD--VGYGEF 398 (401)
T ss_dssp TTCEECCSCTTCSCCEEEETTEEEECSCSSCCCEECTTCEECTTCEECTTCEECTTCEECTT-CEECSC--BCTTCE
T ss_pred CCcEEcCcccCCCceeEEECCceEEecccccCcEECCCeEECCCcEEcCCcEECCCcEECCC-CeEccc--cCCCcE
Confidence 6666541 1222 24555555555555555566677778888877 555554 566654
No 116
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.05 E-value=6e-10 Score=108.40 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=60.6
Q ss_pred EECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-----------
Q 010006 401 VIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK----------- 467 (520)
Q Consensus 401 ~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~----------- 467 (520)
.|+++++|.+ |.|. ++.||++|.|+++|.|.+..- .++.||+++ .|++++.|.
T Consensus 61 ~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~-----------~~i~IG~~~---~Ig~~~~I~~~~~~~~~g~~ 126 (247)
T 1qre_A 61 VIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEG-----------MPIFVGDRS---NVQDGVVLHALETINEEGEP 126 (247)
T ss_dssp EECTTCEECTTCEEEESEEECTTCEECTTCEEEESSS-----------CCEEECTTC---EECTTCEEEECCSBCTTSCB
T ss_pred EECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCC-----------CCEEECCCC---EECCCeEEEecccccccCcc
Confidence 3455555554 4443 677888888888887765420 012223333 455555553
Q ss_pred -------------ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 468 -------------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 468 -------------~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
+++||+++.||++|.|.+...+++.+++|.++.|.+ ++||++++|++|++|
T Consensus 127 ~~~~~~~~~~~~~~v~IG~~v~Ig~~~~I~~~~~Ig~~v~IG~~a~I~~--v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 127 IEDNIVEVDGKEYAVYIGNNVSLAHQSQVHGPAAVGDDTFIGMQAFVFK--SKVGNNCVLEPRSAA 190 (247)
T ss_dssp CGGGCEEETTEEESEEECTTCEECTTCEEEEEEEECTTCEECTTCEEEE--EEECTTCEECTTCEE
T ss_pred cccceeeccCccCceEECCCCEECCCCEEcCCcEECCCCEECCCCEEec--eEECCCCEECCCCEE
Confidence 367777777777777765455556556665655554 566666666666653
No 117
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.04 E-value=1.7e-10 Score=114.49 Aligned_cols=88 Identities=20% Similarity=0.334 Sum_probs=47.0
Q ss_pred eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcc---------eE
Q 010006 400 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKR---------AI 470 (520)
Q Consensus 400 ~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~---------~i 470 (520)
+.||+||+|+. +++|+.++.||++|.|...+.. .+.||+++ .|+.++.|.. ++
T Consensus 197 A~IGeGv~Igp----~a~Vn~na~IGdg~iI~~~a~i-----------gv~IGdnv---~IgpGa~IgG~~~~~~~~~V~ 258 (347)
T 3r5d_A 197 AYIGEGTTVMH----EGFVNFNAGTEGPGMIEGRVSA-----------GVFVGKGS---DLGGGCSTMGTLSGGGNIVIS 258 (347)
T ss_dssp EEECTTEEECT----TCEECTTEEESSSEEECSEECT-----------TCEECTTE---EECTTCEECC------CCCCE
T ss_pred CEECCCCEECC----CCEECCCCEECCCcEEcCCceE-----------eEEECCCC---EECCCCEEccccCCCCccceE
Confidence 44555555553 3344444444444444433321 14455555 6777776653 67
Q ss_pred ECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEe
Q 010006 471 IDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALI 514 (520)
Q Consensus 471 i~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i 514 (520)
||+||.||.|++| + ..||++|+|+.| ++|.+++.|
T Consensus 259 IGdnv~IGAnAtI--G------VtIGd~~iIGAG-SVVtkdt~I 293 (347)
T 3r5d_A 259 VGEGCLIGANAGI--G------IPLGDRNIVEAG-LYITAGTKV 293 (347)
T ss_dssp ECTTCEECTTCEE--C------SCBCTTCEECTT-CEECTTCEE
T ss_pred ECCCCEECCCCEE--e------eEECCCCEECCC-CEECCCCEE
Confidence 7777777777777 2 344555555555 444444444
No 118
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.02 E-value=3.2e-10 Score=111.74 Aligned_cols=51 Identities=22% Similarity=0.401 Sum_probs=32.2
Q ss_pred ccccCCCcceeeCCCCEEcc---------eEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 449 FLAAKGSVPIGIGKNSHIKR---------AIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 449 ~~~~~~~~~~~Ig~~~~i~~---------~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
+.||+++ .|+.++.|.. ++||+||.||.|++| +..+++.+.|+.|++|..+
T Consensus 208 v~IGd~v---~IgpGa~IgG~~~~~~~~~V~IGDnv~IGanAtI--gVtIGd~~iIGAGSVVtkd 267 (332)
T 3fsy_A 208 VVVGDGS---DVGGGASIMGTLSGGGTHVISIGKRCLLGANSGL--GISLGDDCVVEAGLYVTAG 267 (332)
T ss_dssp CEECTTC---EECTTCEECSBCC---CCBCEECTTCEECTTCEE--CSCBCSSCEECTTCEECTT
T ss_pred eEECCCC---EECCCCEEcCCCCCCCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCC
Confidence 5566666 6777777753 788888888888887 4445554444444444444
No 119
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.01 E-value=8.7e-10 Score=108.96 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=33.8
Q ss_pred eeCCCCEEc-ceEECCCCEECCCcEEec--------CCCcCCcccccCCeEEccCeEEEcCCCEeCCCccC
Q 010006 459 GIGKNSHIK-RAIIDKNARIGDNVKIVN--------SDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 520 (520)
Q Consensus 459 ~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~--------~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtvi 520 (520)
.|+.+++|. +++||+||.|+.++.|.+ ...+++++++|.++.|..+ |+||++++|++|++|
T Consensus 141 ~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~a~I~~g-v~IG~~avIgagsvV 210 (276)
T 3gos_A 141 MVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGARSEVVEG-VIVEEGSVISMGVFI 210 (276)
T ss_dssp EECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTTCEECTT-CEECTTCEECTTCEE
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCCCEECCC-CEECCCCEECCCCEE
Confidence 445555554 255555555555555533 3345555555555555555 666666666666653
No 120
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.00 E-value=1.2e-09 Score=109.71 Aligned_cols=85 Identities=15% Similarity=0.203 Sum_probs=46.4
Q ss_pred EECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCCCEE
Q 010006 401 VIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARI 477 (520)
Q Consensus 401 ~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~I 477 (520)
+|+.+|.|++ |.|. ++.||.+|.||++|.|..++.++...... ....+.||+++ .||.++.|. ++.||++|.|
T Consensus 170 ~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~-~~~~v~IGd~v---~IG~~a~I~~gv~IG~g~vI 245 (316)
T 3tk8_A 170 YTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPL-QANPVIIEDNC---FIGARSEVVEGVIVEENSVI 245 (316)
T ss_dssp EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSST-TSCCCEECTTC---EECTTCEECTTCEECTTCEE
T ss_pred EEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccc-cCCCcEECCCC---EECCCCEEcCCCEECCCCEE
Confidence 3444444444 4444 57777777777777777776665422111 12345555555 556555553 5555555555
Q ss_pred CCCcEEecCCCc
Q 010006 478 GDNVKIVNSDSV 489 (520)
Q Consensus 478 g~~~~i~~~~~v 489 (520)
|++++|.....+
T Consensus 246 gagsvV~~~t~I 257 (316)
T 3tk8_A 246 SMGVYLGQSTKI 257 (316)
T ss_dssp CTTCEECTTCCE
T ss_pred cCCCEEcCCeee
Confidence 555555543333
No 121
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.96 E-value=1.5e-09 Score=103.26 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=13.3
Q ss_pred eEECCCcEEee-eEEee----eEECCCCEECC
Q 010006 400 SVIGEGCVIKN-CKIHH----SVVGLRSCISE 426 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i~~----s~Ig~~~~Ig~ 426 (520)
+.||++|.|++ +.+.. +.||++|.|++
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~ 90 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGN 90 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECS
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECC
Confidence 55566666655 44431 44444444444
No 122
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.96 E-value=1.1e-09 Score=116.26 Aligned_cols=94 Identities=18% Similarity=0.119 Sum_probs=66.9
Q ss_pred ccccCCCccccCCCcCCCceee-cccccceEECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccccccc
Q 010006 372 SFYDRSAPIYTQPRYLPPSKML-DADVTDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRF 449 (520)
Q Consensus 372 ~~~~~~~~i~~~~~~~~~~~i~-~~~i~~~~Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~ 449 (520)
.++++.+.+...+.+.+++.+. ++.|.+++||++|.|+. |.|.+++||++|.|+++|.|.+++|.++
T Consensus 280 a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~----------- 348 (496)
T 3c8v_A 280 ASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDM----------- 348 (496)
T ss_dssp CEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEET-----------
T ss_pred cEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCC-----------
Confidence 4566666555555566666554 45567788888888887 8888888888888888888877555544
Q ss_pred cccCCCcceeeCCCCEEcc-----eEECCCCEECCCcEEe
Q 010006 450 LAAKGSVPIGIGKNSHIKR-----AIIDKNARIGDNVKIV 484 (520)
Q Consensus 450 ~~~~~~~~~~Ig~~~~i~~-----~ii~~~~~Ig~~~~i~ 484 (520)
+.||.++.|.. ++|+++|.||.++++.
T Consensus 349 --------v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 349 --------IFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp --------CEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred --------cEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 47888888774 4777777777777664
No 123
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.90 E-value=3.8e-09 Score=104.89 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=20.8
Q ss_pred eEECCCCEECCCcEEecC--------CCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 469 AIIDKNARIGDNVKIVNS--------DSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 469 ~ii~~~~~Ig~~~~i~~~--------~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
++||++|.||.++.|.+. ..+++.+++|.++.| + ++||++++|++|++
T Consensus 231 v~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdnv~IGAnAtI--G-VtIGd~~iIGAGSV 286 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGTLSGGGNIVISVGEGCLIGANAGI--G-IPLGDRNIVEAGLY 286 (347)
T ss_dssp CEECTTEEECTTCEECC------CCCCEECTTCEECTTCEE--C-SCBCTTCEECTTCE
T ss_pred EEECCCCEECCCCEEccccCCCCccceEECCCCEECCCCEE--e-eEECCCCEECCCCE
Confidence 444455555555444332 233333333333333 3 44555555555544
No 124
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.90 E-value=2.6e-09 Score=104.13 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=20.8
Q ss_pred cceEECCCcEEee-eEEe---eeEECCCCEECCCCEEc
Q 010006 398 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIE 431 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~ 431 (520)
.++.||++|.|.+ +.|. ++.||++|.|+++|.|.
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~ 121 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVV 121 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEE
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEE
Confidence 3456666666666 5553 45666666666666665
No 125
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.88 E-value=6e-09 Score=99.33 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=14.4
Q ss_pred ceEECCCcEEeeeEEeeeEECCCCEECCCCEEc
Q 010006 399 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIE 431 (520)
Q Consensus 399 ~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~ 431 (520)
+++|+++|+|+. ++.||++|.|+.+|.|.
T Consensus 117 g~~I~~~~~i~~----~~~IG~~~~I~~~~~I~ 145 (220)
T 4ea9_A 117 GVAVMAGVAINA----DSWIGDLAIINTGAVVD 145 (220)
T ss_dssp SCEECTTCEECT----TCEECTTCEECTTCEEC
T ss_pred CCEEcCCCEECC----CCEECCCCEECCCCEEC
Confidence 345555555553 34445555555555444
No 126
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.87 E-value=2e-09 Score=100.84 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=28.4
Q ss_pred cceEECCCcEEee-eEEe---eeEECCCCEECCCCEEcccE
Q 010006 398 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTL 434 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~~ 434 (520)
.++.||++|+|+. |.|. ...||++|.||++|.|....
T Consensus 75 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~ 115 (195)
T 3nz2_A 75 KTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTAS 115 (195)
T ss_dssp TTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEE
T ss_pred CCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCC
Confidence 4577888888886 7775 34889999999998887654
No 127
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.87 E-value=8.5e-09 Score=105.21 Aligned_cols=139 Identities=17% Similarity=0.327 Sum_probs=66.9
Q ss_pred cceEEeCCC--HHHHHHhhhhcccCC-CCCCccccCCCcccc------CCCcCCCceeecccccceEECCCcEEeeeEEe
Q 010006 344 DGYWEDIGT--IEAFYNANLGITKKP-IPDFSFYDRSAPIYT------QPRYLPPSKMLDADVTDSVIGEGCVIKNCKIH 414 (520)
Q Consensus 344 ~g~w~dI~t--~~dy~~An~~~l~~~-~~~~~~~~~~~~i~~------~~~~~~~~~i~~~~i~~~~Ig~g~~I~~~~i~ 414 (520)
..+|.+.+. |++|......+.... .....+++.-..+.. .+++.|++.+. .++.||++|.|++
T Consensus 169 ~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~----~~a~IG~gv~Ig~---- 240 (387)
T 2rij_A 169 NVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVR----MGASLAAGTTIMP---- 240 (387)
T ss_dssp CEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBB----TTCBCCTTCEECS----
T ss_pred eeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEEC----CCeEEcCCCEEeC----
Confidence 468999998 778877776655221 122344444332211 22333333222 2344444444442
Q ss_pred e-eEECCCCE-ECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEE----cc-----eEECCCCEECCCcEE
Q 010006 415 H-SVVGLRSC-ISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHI----KR-----AIIDKNARIGDNVKI 483 (520)
Q Consensus 415 ~-s~Ig~~~~-Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i----~~-----~ii~~~~~Ig~~~~i 483 (520)
+ ++|+.++. ||+ |.|+. . ++ ..+.||+++ .|+.++.| .+ ++||++|.||.+++
T Consensus 241 g~a~Ig~nv~vIG~-~~I~~-~-Ig---------~~vvIGdnv---~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv- 304 (387)
T 2rij_A 241 GASYVNFNAGTTGA-CMVEG-R-IS---------SSAIVGEGS---DVGGGASILGVLSGTSGNAISVGKACLLGANSV- 304 (387)
T ss_dssp SSCEECTTCEESSC-CEECS-E-EC---------TTCEECTTC---EECTTCEECCBCSSTTCCBCEECTTCEECTTCE-
T ss_pred CeeEECCCcEEECC-EEEee-E-EC---------CCCEECCCC---EECCCceEcceecCCCccCeEEeCCCEECCCCc-
Confidence 2 44454554 444 44432 1 11 234444444 45555542 22 56666666666665
Q ss_pred ecCCCcCCcccccCCeEEccCeEEEcCCCEe
Q 010006 484 VNSDSVQEAARETDGYFIKSGIVTIIKDALI 514 (520)
Q Consensus 484 ~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i 514 (520)
.++.+|++|+|++| ++|.+++.+
T Consensus 305 -------~GV~IGdgavIGAG-sVVt~dv~i 327 (387)
T 2rij_A 305 -------TGIPLGDNCIVDAG-IAVLEGTKF 327 (387)
T ss_dssp -------ECSCBCTTCEECTT-CEECTTCEE
T ss_pred -------CCcEECCCCEECCC-CEECCCcee
Confidence 23445555555555 445444444
No 128
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.85 E-value=6.4e-09 Score=102.55 Aligned_cols=34 Identities=12% Similarity=0.162 Sum_probs=17.7
Q ss_pred cccccCCCcceeeCCCCEEcceEECCCCEECCCcEEec
Q 010006 448 RFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 448 ~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~ 485 (520)
.+.||+++ .||.|+.| ++.||++|.||++++|..
T Consensus 233 ~V~IGDnv---~IGanAtI-gVtIGd~~iIGAGSVVtk 266 (332)
T 3fsy_A 233 VISIGKRC---LLGANSGL-GISLGDDCVVEAGLYVTA 266 (332)
T ss_dssp BCEECTTC---EECTTCEE-CSCBCSSCEECTTCEECT
T ss_pred ceEECCCC---EECCCCEE-eeEECCCCEECCCCEECC
Confidence 44555555 45555555 555555555555555544
No 129
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.83 E-value=1.1e-08 Score=95.56 Aligned_cols=59 Identities=10% Similarity=0.194 Sum_probs=29.9
Q ss_pred eCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCCCEeCCCcc
Q 010006 460 IGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTI 519 (520)
Q Consensus 460 Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~~~i~~gtv 519 (520)
|+.++.|. +++|++++.|++++.|.+...+++.++++.++.|..+ ++||++++|++|++
T Consensus 116 I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~-~~Ig~~~~Igagsv 175 (194)
T 3bfp_A 116 LNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPN-LSLADDSILGGGAT 175 (194)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT-CEECTTCEECTTCE
T ss_pred ECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCC-CEECCCCEECCCCE
Confidence 44444443 4555555555555555444445555555555555555 55555555555554
No 130
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.81 E-value=2.5e-09 Score=102.17 Aligned_cols=18 Identities=28% Similarity=0.418 Sum_probs=11.0
Q ss_pred ceEECCCCEECCCcEEec
Q 010006 468 RAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 468 ~~ii~~~~~Ig~~~~i~~ 485 (520)
+++||++|.||.+|+|.+
T Consensus 119 ~v~IG~~v~IG~~a~I~~ 136 (220)
T 4hur_A 119 DIEIGNDVWIGRDVTIMP 136 (220)
T ss_dssp CEEECSSCEECTTCEECT
T ss_pred CeEECCCcEECCCCEEeC
Confidence 455666666666666654
No 131
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.80 E-value=1.9e-08 Score=107.85 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=57.7
Q ss_pred ceEECCCcEEee-eEEe-eeEECCCCEECCCCEEcccEEECCcccccccc-ccccccCCCcceeeCCCCEEc--------
Q 010006 399 DSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDTLLMGADYYETDAD-RRFLAAKGSVPIGIGKNSHIK-------- 467 (520)
Q Consensus 399 ~~~Ig~g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~Ig~~~~i~-------- 467 (520)
++.+++++.|++ +.+. +++|+++|.||.+|.|+++++..++....... ..+.||+++ .||.++.+-
T Consensus 334 ~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~~~~i~d~~Ig~~v---~IG~g~i~~n~dg~~~~ 410 (501)
T 3st8_A 334 SSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPHLTYVGDADIGEYS---NIGASSVFVNYDGTSKR 410 (501)
T ss_dssp EEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEESCEEESEEECSSC---EECTTCEEECBCSSSBC
T ss_pred ccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEeccceecCceEcCCC---EECCCEEEEcccCCccc
Confidence 344555555555 5444 45555555555555555555544322211111 234455555 677777663
Q ss_pred ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCeEEEcCC
Q 010006 468 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKD 511 (520)
Q Consensus 468 ~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~v~Ig~~ 511 (520)
+++||++|.||.++.|.. ..+||++++|++| .+|.++
T Consensus 411 ~t~IGd~~~iG~~~~l~~------~v~Ig~~~~i~ag-s~v~~d 447 (501)
T 3st8_A 411 RTTVGSHVRTGSDTMFVA------PVTIGDGAYTGAG-TVVRED 447 (501)
T ss_dssp CEEECTTCEECTTCEEES------SEEECTTCEECTT-CEECSC
T ss_pred CCEECCCcEECCCCEEcC------CcEECCCCEECCC-CEECcc
Confidence 377777888877777765 4566667777777 554443
No 132
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.80 E-value=1.1e-08 Score=96.22 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=32.5
Q ss_pred CCcCCCceeecccccceEECCCcEEee-eEEe---eeEECCCCEECCCCEEcccE
Q 010006 384 PRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTL 434 (520)
Q Consensus 384 ~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~~ 434 (520)
+.+.|+..+.- -.++.||++|+|+. |.|. ...||++|.||++|.|..+.
T Consensus 61 ~~i~~~~~~~~--g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~ 113 (199)
T 3ftt_A 61 VSISIPFDTDY--GWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTAT 113 (199)
T ss_dssp EEECSSEEESS--STTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEE
T ss_pred eEEeCCEEEEe--cCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCC
Confidence 34445544420 04577788887776 7774 36899999999999886553
No 133
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.80 E-value=1.7e-08 Score=94.11 Aligned_cols=49 Identities=14% Similarity=0.178 Sum_probs=32.5
Q ss_pred CCCcCCCceeecccc-cceEECCCcEEee-eEEe---eeEECCCCEECCCCEEcccE
Q 010006 383 QPRYLPPSKMLDADV-TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDTL 434 (520)
Q Consensus 383 ~~~~~~~~~i~~~~i-~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~~ 434 (520)
.+.+.|+..+. + .++.||++|+|+. |.|. ...||++|.|+++|.|.++.
T Consensus 64 ~~~I~~~~~~~---~g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~ 117 (190)
T 3hjj_A 64 KAQINPDFRCD---YGYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTAT 117 (190)
T ss_dssp CCEECSSCEES---SSTTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEE
T ss_pred CcEECCCEEEE---eCCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCC
Confidence 34445554432 1 3567777777776 6665 46789999999998887654
No 134
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.78 E-value=1.3e-08 Score=95.76 Aligned_cols=50 Identities=16% Similarity=0.121 Sum_probs=34.9
Q ss_pred cCCCcCCCceeecccccceEECCCcEEee-eEEee---eEECCCCEECCCCEEccc
Q 010006 382 TQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH---SVVGLRSCISEGAIIEDT 433 (520)
Q Consensus 382 ~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~---s~Ig~~~~Ig~~~~I~~~ 433 (520)
..+.+.|+..+. .-.++.||++|+|+. |.|.+ ..||++|.||++|.|...
T Consensus 60 ~~~~I~~~~~~~--~g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 113 (203)
T 1krr_A 60 ENAWVEPPVYFS--YGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVT 113 (203)
T ss_dssp SSCEECSCEEES--CSTTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESE
T ss_pred CCcEEcCCeEEE--eCCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecC
Confidence 344555654331 015678899998887 77764 789999999999988654
No 135
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.77 E-value=1.2e-08 Score=94.88 Aligned_cols=50 Identities=12% Similarity=0.047 Sum_probs=31.9
Q ss_pred cCCCcCCCceeecccccceEECCCcEEee-eEEee---eEECCCCEECCCCEEccc
Q 010006 382 TQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHH---SVVGLRSCISEGAIIEDT 433 (520)
Q Consensus 382 ~~~~~~~~~~i~~~~i~~~~Ig~g~~I~~-~~i~~---s~Ig~~~~Ig~~~~I~~~ 433 (520)
..+.+.|+..+.- -.++.||++++|+. |.|.+ ..||++|.||++|.|...
T Consensus 61 ~~~~I~~~~~~~~--g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~ 114 (188)
T 3srt_A 61 KQINVEQNIRCDY--GYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTA 114 (188)
T ss_dssp SCEEECSCEEESS--STTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECE
T ss_pred CCCEEcCCEEEEe--CCCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeC
Confidence 3444555554420 03567777777776 66653 378888888888888543
No 136
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.76 E-value=1.2e-08 Score=102.05 Aligned_cols=59 Identities=20% Similarity=0.366 Sum_probs=30.2
Q ss_pred eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCCCEECCCcEEecC
Q 010006 415 HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNS 486 (520)
Q Consensus 415 ~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~~ 486 (520)
+++||++|.||++|.|...+.+++ .+.+++++ .|+.++. ++++||+||.||.+++|.++
T Consensus 183 gvvIG~~~~IG~~v~I~~~vtIG~---------~~~ig~~~---~i~~~~~-~~~~IGd~v~IGaga~Ilgg 241 (313)
T 3q1x_A 183 GVVIGETAIIGEWCRIYQSVTLGA---------MHFQEEGG---VIKRGTK-RHPTVGDYVTIGTGAKVLGN 241 (313)
T ss_dssp TCEECTTCEECSSCEECTTCEEEC---------CCCCCTTC---CCCCCSS-CSCEECSSCEECTTCEEESS
T ss_pred ceEECCCcEECCCCEECCCcEEeC---------CcEECCCc---eEcCCCc-cCCEECCCCEECCCCEECCC
Confidence 466667777777766666555543 11222222 2222221 23466666666666666543
No 137
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.74 E-value=2.6e-08 Score=94.57 Aligned_cols=18 Identities=22% Similarity=0.342 Sum_probs=10.0
Q ss_pred ceEECCCCEECCCcEEec
Q 010006 468 RAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 468 ~~ii~~~~~Ig~~~~i~~ 485 (520)
+++||++|.||++|+|.+
T Consensus 100 ~i~IG~~~~Ig~~~~I~~ 117 (215)
T 2wlg_A 100 KISIGKDCMLAHGYEIRN 117 (215)
T ss_dssp EEEECTTCEECTTEEEES
T ss_pred CEEECCCCEEcCCEEEEC
Confidence 455555555555555554
No 138
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=98.72 E-value=3.3e-08 Score=92.54 Aligned_cols=8 Identities=25% Similarity=0.426 Sum_probs=3.5
Q ss_pred eeCCCCEE
Q 010006 459 GIGKNSHI 466 (520)
Q Consensus 459 ~Ig~~~~i 466 (520)
.||++++|
T Consensus 104 ~Ig~~~~I 111 (195)
T 3nz2_A 104 LIGPSTQF 111 (195)
T ss_dssp EECTTCEE
T ss_pred EECCCCEE
Confidence 34444444
No 139
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=98.70 E-value=4.3e-08 Score=91.31 Aligned_cols=18 Identities=22% Similarity=0.143 Sum_probs=10.3
Q ss_pred eeEECCCCEECCCCEEcc
Q 010006 415 HSVVGLRSCISEGAIIED 432 (520)
Q Consensus 415 ~s~Ig~~~~Ig~~~~I~~ 432 (520)
++.||+++.|+.+|.|.+
T Consensus 78 ~v~IG~~~~I~~~~~i~~ 95 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILD 95 (190)
T ss_dssp TEEECTTCEECTTCEEEC
T ss_pred ceEECCceeeCCCeEEEe
Confidence 455666666666655543
No 140
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.69 E-value=1.8e-08 Score=100.75 Aligned_cols=84 Identities=17% Similarity=0.186 Sum_probs=55.0
Q ss_pred ceEECCCcEE--ee-eEEe-eeEECCCCEECCCCEEcccEEECC-ccccccccccccccCCCcceeeCCCCEEc-ceEEC
Q 010006 399 DSVIGEGCVI--KN-CKIH-HSVVGLRSCISEGAIIEDTLLMGA-DYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIID 472 (520)
Q Consensus 399 ~~~Ig~g~~I--~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~ 472 (520)
++.||++++| +. +.|. ++.||++|.|+.+++|++....+. ........+.++||+++ .||.+++|. +++||
T Consensus 169 ~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v---~IGaga~Ilggv~IG 245 (313)
T 3q1x_A 169 GASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYV---TIGTGAKVLGNIIVG 245 (313)
T ss_dssp TCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSC---EECTTCEEESSCEEC
T ss_pred CCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCC---EECCCCEECCCcEEC
Confidence 3445555555 22 4554 799999999999999987554442 22223333556777777 677777765 67777
Q ss_pred CCCEECCCcEEec
Q 010006 473 KNARIGDNVKIVN 485 (520)
Q Consensus 473 ~~~~Ig~~~~i~~ 485 (520)
+||.||+|+++..
T Consensus 246 ~~a~IGagsvV~~ 258 (313)
T 3q1x_A 246 SHVRIGANCWIDR 258 (313)
T ss_dssp SSEEECTTCEECS
T ss_pred CCCEECCCCEECC
Confidence 7777777777754
No 141
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.68 E-value=4e-08 Score=102.83 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=50.3
Q ss_pred eEECCCcEEee------eEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECC
Q 010006 400 SVIGEGCVIKN------CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDK 473 (520)
Q Consensus 400 ~~Ig~g~~I~~------~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~ 473 (520)
+.|.+++.|+. +.+.++.||++|.| ++|.|.++++.++ +.||+++.|.+|+|++
T Consensus 303 ~~i~~~~~i~~~~~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~-------------------~~I~~~~~i~~~~i~~ 362 (420)
T 3brk_X 303 AEITPPAKFVHDDEDRRGSAVSSVVSGDCII-SGAALNRSLLFTG-------------------VRANSYSRLENAVVLP 362 (420)
T ss_dssp CCCCCCCEEECBCSSCBCEEESCEECSSCEE-ESCEEESCEECTT-------------------CEECTTCEEEEEEECT
T ss_pred cccCCCcEEecccccCCcEecCCEECCCCEE-cCCEEeCcEEcCC-------------------CEECCCCEEcceEEcC
Confidence 44555555552 55557788888888 7777776666544 4899999999999999
Q ss_pred CCEECCCcEEec
Q 010006 474 NARIGDNVKIVN 485 (520)
Q Consensus 474 ~~~Ig~~~~i~~ 485 (520)
+|.||++|.|.+
T Consensus 363 ~~~i~~~~~i~~ 374 (420)
T 3brk_X 363 SVKIGRHAQLSN 374 (420)
T ss_dssp TCEECTTCEEEE
T ss_pred CCEECCCCEEec
Confidence 999999999974
No 142
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.67 E-value=2.9e-08 Score=104.78 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=63.7
Q ss_pred cceEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCC---
Q 010006 398 TDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKN--- 474 (520)
Q Consensus 398 ~~~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~--- 474 (520)
.++.|+++++|.++.|.+++||++|.|+. |.|.++++.++ +.||+++.|.++++..+
T Consensus 313 ~~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~~~~Ig~~-------------------~~Ig~~~~I~~~~~~~~~~~ 372 (451)
T 1yp2_A 313 TQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIHHSVVGLR-------------------SCISEGAIIEDSLLMGADYY 372 (451)
T ss_dssp CCCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEESCEECTT-------------------CEECTTCEEESCEECCCSSC
T ss_pred cCCccCCCeEEcceEEeCeEECCCCEEcc-eEEeccEECCC-------------------CEECCCCEEcCceEECCCCc
Confidence 34666777777446666667777776664 66665555443 37888888876666555
Q ss_pred ----------------CEECCCcEEecCCCcCCcccccCCeEEccCe-----EEEcCCCEeCCCc
Q 010006 475 ----------------ARIGDNVKIVNSDSVQEAARETDGYFIKSGI-----VTIIKDALIPSGT 518 (520)
Q Consensus 475 ----------------~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~-----v~Ig~~~~i~~gt 518 (520)
+.||+++.|.+ ..+++.+.+|+|+.|..+. .+||+++.|++|+
T Consensus 373 ~~~~~~~~~~~~g~~~~~Ig~~~~i~~-~~Ig~~~~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~ 436 (451)
T 1yp2_A 373 ETDADRKLLAAKGSVPIGIGKNCHIKR-AIIDKNARIGDNVKIINKDNVQEAARETDGYFIKSGI 436 (451)
T ss_dssp CCHHHHHHHHTTTCCCSEECTTCEEES-EEECTTCEECTTCEECCSSCCSCEEEGGGTEEEETTE
T ss_pred ccccccccccccCceeEEECCCCEEec-cEeCCCcEECCCCEEeCCcccccCceeCCCEEEcCCE
Confidence 78888888753 5666677777777776541 2556665555554
No 143
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.66 E-value=9.8e-08 Score=94.01 Aligned_cols=80 Identities=18% Similarity=0.288 Sum_probs=51.0
Q ss_pred eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCCCEEC
Q 010006 400 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIG 478 (520)
Q Consensus 400 ~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig 478 (520)
+.||++|+|+.. .+++||++|.||++|.|..++.+++...+ ...+.++||+++ .||.+++|. +++||+||.||
T Consensus 171 a~IG~~v~I~hg--~gvvIG~~~~IGd~v~I~~gvtIg~~~~~-~~~r~~~IGd~v---~IGaga~Il~gv~IG~~a~IG 244 (287)
T 3mc4_A 171 ARLGSGLFLDHA--TGLVVGETAVVEDNVSILHGVTLGGTGKS-SGDRHPKIRQGV---LIGAGAKILGNIQVGQCSKIA 244 (287)
T ss_dssp CEECSSCEEESC--TTCEECTTCEECSSCEEETTCEEEC------CCCSCEECTTC---EECTTCEEESSCEECTTCEEC
T ss_pred CEECCCeEEccC--CCeEECCCeEECCCCEEcCCCEEcCCccc-CCCcCCEECCCC---EECCCCEECCCcEECCCCEEC
Confidence 445555555420 15677777777777777776666543211 122557788887 688888876 68888888888
Q ss_pred CCcEEec
Q 010006 479 DNVKIVN 485 (520)
Q Consensus 479 ~~~~i~~ 485 (520)
+++++..
T Consensus 245 agsvV~k 251 (287)
T 3mc4_A 245 AGSVVLK 251 (287)
T ss_dssp TTCEECS
T ss_pred CCCEEcc
Confidence 8888764
No 144
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.65 E-value=2e-08 Score=95.89 Aligned_cols=11 Identities=18% Similarity=0.295 Sum_probs=5.6
Q ss_pred cceEECCCcEE
Q 010006 398 TDSVIGEGCVI 408 (520)
Q Consensus 398 ~~~~Ig~g~~I 408 (520)
.++.||++|+|
T Consensus 34 ~~v~IG~~t~i 44 (220)
T 4hur_A 34 ENILVGEYSYY 44 (220)
T ss_dssp TTEEECTTCEE
T ss_pred CCEEECCCeEE
Confidence 34555555554
No 145
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.61 E-value=5.1e-08 Score=90.18 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=27.6
Q ss_pred cceEECCCcEEee-eEEe---eeEECCCCEECCCCEEccc
Q 010006 398 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDT 433 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~ 433 (520)
.++.||++|+|+. |.|. ...||++|.|+++|.|...
T Consensus 71 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 110 (182)
T 1ocx_A 71 YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTA 110 (182)
T ss_dssp TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeC
Confidence 4577888888886 7664 4788888888888888643
No 146
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.61 E-value=7e-08 Score=89.53 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=28.2
Q ss_pred cceEECCCcEEee-eEEe---eeEECCCCEECCCCEEccc
Q 010006 398 TDSVIGEGCVIKN-CKIH---HSVVGLRSCISEGAIIEDT 433 (520)
Q Consensus 398 ~~~~Ig~g~~I~~-~~i~---~s~Ig~~~~Ig~~~~I~~~ 433 (520)
.++.||++++|+. |.|. +..||++|.|+++|.|...
T Consensus 73 ~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~ 112 (185)
T 2p2o_A 73 YNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTA 112 (185)
T ss_dssp TTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECE
T ss_pred CCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcC
Confidence 4577888888886 7663 5789999999999988654
No 147
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.61 E-value=8.9e-08 Score=93.61 Aligned_cols=80 Identities=29% Similarity=0.382 Sum_probs=49.1
Q ss_pred eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCCCEEC
Q 010006 400 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIG 478 (520)
Q Consensus 400 ~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig 478 (520)
+.||++++|+.. .+++||++|.||++|+|..++.+++...+ ...+.++||+++ .||.+++|. +++||++|+||
T Consensus 144 a~IG~g~~I~~~--~~vvIG~~~~IG~~v~I~~gvtig~~~~~-~~~~~~~IGd~v---~IGaga~Il~gv~IG~~a~IG 217 (267)
T 1ssq_A 144 AKIGHGIMFDHA--TGIVVGETSVIENDVSILQGVTLGGTGKE-SGDRHPKVREGV---MIGAGAKILGNIEVGKYAKIG 217 (267)
T ss_dssp CEECSSCEESSC--TTCEECTTCEECTTCEECTTCEEECCSSS-CSSCSCEECTTC---EECTTCEEESSCEECTTCEEC
T ss_pred CEECCCEEECCC--CceEECCeeEECCCCEEcCCcEECCCccc-CCCCCeEECCCe---EEcCCCEEeCCcEECCCCEEC
Confidence 455666665530 14567777777777777666666543211 112456677777 677777765 67777777777
Q ss_pred CCcEEec
Q 010006 479 DNVKIVN 485 (520)
Q Consensus 479 ~~~~i~~ 485 (520)
+++++..
T Consensus 218 agsvV~~ 224 (267)
T 1ssq_A 218 ANSVVLN 224 (267)
T ss_dssp TTCEECS
T ss_pred CCCEEcc
Confidence 7777753
No 148
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.60 E-value=5.7e-08 Score=95.71 Aligned_cols=68 Identities=18% Similarity=0.268 Sum_probs=41.4
Q ss_pred cceEECCCcEEeeeEEeeeEEC--CCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEE---cceEEC
Q 010006 398 TDSVIGEGCVIKNCKIHHSVVG--LRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHI---KRAIID 472 (520)
Q Consensus 398 ~~~~Ig~g~~I~~~~i~~s~Ig--~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i---~~~ii~ 472 (520)
.++.|+++|.|+. ++.|+ .++.||++|+|++.+.++. | +.||.+... +.++||
T Consensus 163 ~gi~I~p~a~IG~----~v~I~hg~gvvIG~~~~IGd~v~I~~---------------g---vtIg~~~~~~~~r~~~IG 220 (287)
T 3mc4_A 163 FQTDIHPAARLGS----GLFLDHATGLVVGETAVVEDNVSILH---------------G---VTLGGTGKSSGDRHPKIR 220 (287)
T ss_dssp TCCEECTTCEECS----SCEEESCTTCEECTTCEECSSCEEET---------------T---CEEEC-----CCCSCEEC
T ss_pred cCeEECCCCEECC----CeEEccCCCeEECCCeEECCCCEEcC---------------C---CEEcCCcccCCCcCCEEC
Confidence 4567888888885 55555 6777887777776665442 1 133322111 236778
Q ss_pred CCCEECCCcEEecCC
Q 010006 473 KNARIGDNVKIVNSD 487 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~~ 487 (520)
+||.||.+++|.++.
T Consensus 221 d~v~IGaga~Il~gv 235 (287)
T 3mc4_A 221 QGVLIGAGAKILGNI 235 (287)
T ss_dssp TTCEECTTCEEESSC
T ss_pred CCCEECCCCEECCCc
Confidence 888888887777543
No 149
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=98.60 E-value=2.8e-07 Score=86.69 Aligned_cols=16 Identities=13% Similarity=0.071 Sum_probs=8.8
Q ss_pred ccccCCCcceeeCCCCEEc
Q 010006 449 FLAAKGSVPIGIGKNSHIK 467 (520)
Q Consensus 449 ~~~~~~~~~~~Ig~~~~i~ 467 (520)
+.||+++ .||+++.|.
T Consensus 96 i~IG~~v---~Ig~~v~I~ 111 (203)
T 1krr_A 96 VTIGDNV---LIAPNVTLS 111 (203)
T ss_dssp EEECSSC---EECSSCEEE
T ss_pred eEECCCC---EECCCCEEe
Confidence 4445555 566666553
No 150
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=98.59 E-value=1.9e-07 Score=87.61 Aligned_cols=17 Identities=6% Similarity=0.134 Sum_probs=9.2
Q ss_pred eeEECCCCEECCCCEEc
Q 010006 415 HSVVGLRSCISEGAIIE 431 (520)
Q Consensus 415 ~s~Ig~~~~Ig~~~~I~ 431 (520)
++.||++|.|+.+|.|.
T Consensus 74 ~~~IG~~~~I~~~~~i~ 90 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFM 90 (199)
T ss_dssp TEEECSSEEECTTEEEE
T ss_pred CcEECCCeEECCCeEEe
Confidence 45555555555555553
No 151
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=98.54 E-value=1.2e-07 Score=88.00 Aligned_cols=84 Identities=21% Similarity=0.190 Sum_probs=46.1
Q ss_pred ECCCcEEee-eEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-------------
Q 010006 402 IGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK------------- 467 (520)
Q Consensus 402 Ig~g~~I~~-~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~------------- 467 (520)
+++++.|.. . .+.+|.++.||+++.|...+.+.. ...+.||+++ .||+++.|.
T Consensus 57 ~g~~~~I~~p~---~~~~g~~v~IG~~~~i~~~~~i~~-------~~~i~IG~~v---~Ig~~v~I~~~~h~~~~~~~~~ 123 (185)
T 2p2o_A 57 TGERLFIEPNF---RCDYGYNIHVGENFFMNFDGVILD-------VCEVRIGDHC---FIGPGVHIYTATHPLDPHERNS 123 (185)
T ss_dssp CCSCEEECSCE---EESCSTTEEECTTEEECSSEEEEC-------SSCEEECTTC---EECTTCEEECEECCSSHHHHHT
T ss_pred cCCCcEEeccE---EEEecCCEEECCeeEEcCCeEEEe-------ccceEECCCc---EEeCCCEEEcCCCcCChhhccc
Confidence 566666664 2 234555666666666654433321 1345666666 678888773
Q ss_pred ------ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 468 ------RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 468 ------~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
.++||++|.||.+|+|.. ++++|++++|++|
T Consensus 124 ~~~~~~~v~IGd~v~IG~~~~I~~------gv~IG~~~vIgag 160 (185)
T 2p2o_A 124 GLEYGKPVVIGHNVWIGGRAVINP------GVTIGDNAVIASG 160 (185)
T ss_dssp CCBEECCEEECSSCEECTTCEECT------TCEECTTCEECTT
T ss_pred CccccCCeEEcCCeEECCCCEECC------CCEECCCCEECCC
Confidence 345555555555555543 3455555555555
No 152
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.54 E-value=1e-07 Score=95.12 Aligned_cols=87 Identities=20% Similarity=0.288 Sum_probs=44.4
Q ss_pred eEECCCcEEee-eEE--e-eeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCCC
Q 010006 400 SVIGEGCVIKN-CKI--H-HSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNA 475 (520)
Q Consensus 400 ~~Ig~g~~I~~-~~i--~-~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~ 475 (520)
+.|++++.|++ +.| . +++||++|.||++|.|...+.+++.-...+.. |. .+ ....+.++||+||
T Consensus 191 v~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~-------g~---~i--~~~~~~~~IGd~V 258 (310)
T 3f1x_A 191 IDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNN-------GN---PI--KGIPRHPILEDDV 258 (310)
T ss_dssp CEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------------------CCSCEECTTC
T ss_pred cEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccc-------cc---cc--cCCCCCCEECCCc
Confidence 44455555554 444 1 67888888888888887776665421100000 00 00 0112345777777
Q ss_pred EECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 476 RIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 476 ~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
.||+|++|.++ ++||+++.|++|
T Consensus 259 ~IGaga~Il~g------v~IGd~a~IGag 281 (310)
T 3f1x_A 259 IVYSNATILGR------VTIGKGATVGGN 281 (310)
T ss_dssp EECTTCEEESS------CEECTTCEECSS
T ss_pred EEcCCCEECCC------cEECCCCEECCC
Confidence 77777777643 334444444444
No 153
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=98.53 E-value=3.9e-07 Score=84.62 Aligned_cols=49 Identities=14% Similarity=0.149 Sum_probs=25.8
Q ss_pred ECCCcEEee-eEE---eeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEE
Q 010006 402 IGEGCVIKN-CKI---HHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHI 466 (520)
Q Consensus 402 Ig~g~~I~~-~~i---~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i 466 (520)
+++++.|.. +.+ .++.||+++.|+.+|.|.+. ..+.||+++ .||+++.|
T Consensus 59 ig~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~-------------~~i~IG~~~---~Ig~~v~I 111 (188)
T 3srt_A 59 VGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDV-------------CKIEIGDNV---MLAPNVQI 111 (188)
T ss_dssp CCSCEEECSCEEESSSTTEEECTTEEECTTEEEECS-------------SCEEECSSC---EECTTCEE
T ss_pred cCCCCEEcCCEEEEeCCCeEECCcccccCceEEecC-------------CceEECCee---EECCCcEE
Confidence 455555554 332 14566666666666655432 223344455 67777777
No 154
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.53 E-value=4.6e-06 Score=87.95 Aligned_cols=353 Identities=13% Similarity=0.096 Sum_probs=178.6
Q ss_pred cccceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhC----CC-CeEEEEec-cChhHHHHHHHHhhh
Q 010006 86 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS----NI-SKIYVLTQ-FNSASLNRHLSRAYA 159 (520)
Q Consensus 86 ~~~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~----gi-~~I~Iv~~-~~~~~i~~~l~~~~~ 159 (520)
...++.+|+||||.||||+ ...||.++|+...+++++..++++... |. =..+|.+. ...+...++|++...
T Consensus 124 ~l~kvavvlLaGGlGTRLG---~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~~~ 200 (528)
T 3r3i_A 124 VLNKLVVVKLNGGLGTSMG---CKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKYNH 200 (528)
T ss_dssp TCTTEEEEEECCCBCTTTT---CSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGGTT
T ss_pred hcCceEEEEeCCCCccccC---CCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhcCc
Confidence 3468999999999999997 468999999973459999999998764 42 24456665 456778888887432
Q ss_pred ccCCC-CcCCCeEEEeecc-cC----------CCCCCCc-cCcHHHHHH-----HHHHhhhcCcceEEEEeCceec-ccc
Q 010006 160 SNMGG-YKNEGFVEVLAAQ-QS----------PENPNWF-QGTADAVRQ-----YLWLFEEHNVLEFLVLAGDHLY-RMD 220 (520)
Q Consensus 160 ~~~~~-~~~~~~v~vl~~~-~~----------~~~~~~~-~Gt~~al~~-----~~~~l~~~~~~~~Lvl~gD~l~-~~d 220 (520)
++... .|.+..+..+... .- +....|. .|.++-... .++.+...+.+++.+...|.+. ..|
T Consensus 201 fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vD 280 (528)
T 3r3i_A 201 CRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVD 280 (528)
T ss_dssp SSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCC
T ss_pred cCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccC
Confidence 22100 0011000001000 00 0111232 454332221 1233444567899999999954 444
Q ss_pred HHHHHHHHHhc----CCcEEEEEEecCcccCcceEEEEe-CCCCCEEEeeeCCChhhhhhcccccccccCCchhhccCCc
Q 010006 221 YERFIQAHRET----DADITVAALPMDEKRATAFGLMKI-DEEGRIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEMPY 295 (520)
Q Consensus 221 l~~ll~~h~~~----~a~~tl~~~~~~~~~~~~~g~v~~-d~~g~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (520)
.. ++..+..+ ++++.+-+.+....+ ..-|.++. |..-+++++.+-|...... .+ ....-.
T Consensus 281 p~-~Lg~~~~~~~~~~~d~~~kVv~Kt~~d-ek~Gvl~~~dGk~~vvEyseip~e~~~~----~~---------g~~~f~ 345 (528)
T 3r3i_A 281 LY-ILNHLMNPPNGKRCEFVMEVTNKTRAD-VKGGTLTQYEGKLRLVEIAQVPKAHVDE----FK---------SVSKFK 345 (528)
T ss_dssp HH-HHHHHSSCSSSCCCSEEEEECCCCTTC-CSSCEEECSSSSCEEECTTSSCGGGTTT----SS---------CSSSCC
T ss_pred HH-HHHHHHhcccccCCcEEEEEeEccccC-CcccEEEEECCeEEEEEecCCChhHhhc----cC---------CcccCC
Confidence 32 55555555 777766555433222 23354443 3334567776666543211 00 011123
Q ss_pred eeeeeEEEEeHHHHHHHHhhhCCCCC--------C-----cc-ccchHhhhhCCceEEEEEec-ceEEeCCCHHHHHHhh
Q 010006 296 IASMGIYVISKDVMLNLLRDKFPGAN--------D-----FG-SEVIPGATSIGMRVQAYLYD-GYWEDIGTIEAFYNAN 360 (520)
Q Consensus 296 l~~~GIyifs~~vl~~ll~~~~~~~~--------~-----~~-~dil~~li~~~~~v~a~~~~-g~w~dI~t~~dy~~An 360 (520)
+.++...+|+-+.+.+++++...... + +. +-.+-.+++.-.+..++.+. ..+..+.+..|++...
T Consensus 346 ~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdLll~~ 425 (528)
T 3r3i_A 346 IFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDLLLVM 425 (528)
T ss_dssp CCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHHHHHH
T ss_pred eEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHHHHHh
Confidence 57889999999999988875321110 0 00 11111112111123334443 3488899999987665
Q ss_pred hhcccCCCCCCccccCCCccccC--CCcCCCceeecccccc--eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEE
Q 010006 361 LGITKKPIPDFSFYDRSAPIYTQ--PRYLPPSKMLDADVTD--SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLM 436 (520)
Q Consensus 361 ~~~l~~~~~~~~~~~~~~~i~~~--~~~~~~~~i~~~~i~~--~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~ 436 (520)
..+...... .-...+.....+. ....+. +. +|.+ .-+..--.|-+ ..+-.|--+++.|.++++.+.+++
T Consensus 426 Sdly~l~~g-~l~~~~~r~~~~~P~v~L~~~--~~--~v~~f~~rf~~iP~l~~--~~~LtV~Gdv~fg~~v~l~G~v~i 498 (528)
T 3r3i_A 426 SNLYSLNAG-SLTMSEKREFPTVPLVKLGSS--FT--KVQDYLRRFESIPDMLE--LDHLTVSGDVTFGKNVSLKGTVII 498 (528)
T ss_dssp STTSEEETT-EEECCSSCSSCCCCEEEECTT--SC--SHHHHHHHCSSCCEEEE--EEEEEEESEEECCTTCEEEEEEEE
T ss_pred cceeEeeCC-eEEecccccCCCCCEEEeCcc--cC--cHHHHHHhCCCCCCccc--CCEEEEecceEECCCcEEEEEEEE
Confidence 443221100 0111111101000 011111 11 1111 11111122222 124345555888888888888877
Q ss_pred CCccccccccccccccCCCcceeeCCCCEEcceEECCCCEE
Q 010006 437 GADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARI 477 (520)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~I 477 (520)
-++ ...++.|.+++++++.+|--|.+|
T Consensus 499 ~~~--------------~g~~~~ip~g~~len~~v~g~~~~ 525 (528)
T 3r3i_A 499 IAN--------------HGDRIDIPPGAVLENKIVSGNLRI 525 (528)
T ss_dssp ECC--------------TTCEEECCTTCEEEEEEEC-----
T ss_pred EcC--------------CCCceecCCCCEEeccEEeccccc
Confidence 431 223478999999999888766665
No 155
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=98.52 E-value=3.7e-07 Score=84.37 Aligned_cols=8 Identities=25% Similarity=0.360 Sum_probs=3.5
Q ss_pred eeCCCCEE
Q 010006 459 GIGKNSHI 466 (520)
Q Consensus 459 ~Ig~~~~i 466 (520)
.|++++.|
T Consensus 100 ~Ig~~v~I 107 (182)
T 1ocx_A 100 MLAPGVHI 107 (182)
T ss_dssp EECTTCEE
T ss_pred EEeCCcEE
Confidence 34444444
No 156
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.51 E-value=2e-07 Score=93.02 Aligned_cols=83 Identities=19% Similarity=0.233 Sum_probs=52.0
Q ss_pred eEECCCcEE--ee-eEEe-eeEECCCCEECCCCEEcccEEE-CCc-cccccccccccccCCCcceeeCCCCEEc-ceEEC
Q 010006 400 SVIGEGCVI--KN-CKIH-HSVVGLRSCISEGAIIEDTLLM-GAD-YYETDADRRFLAAKGSVPIGIGKNSHIK-RAIID 472 (520)
Q Consensus 400 ~~Ig~g~~I--~~-~~i~-~s~Ig~~~~Ig~~~~I~~~~i~-~~~-~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~ 472 (520)
+.||++++| +. +.|. +++||++|.|+++|+|.+.... +.+ .......+.++||+++ .||.+++|. +++||
T Consensus 197 a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V---~IGaga~Il~gv~IG 273 (310)
T 3f1x_A 197 AQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDV---IVYSNATILGRVTIG 273 (310)
T ss_dssp CEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTC---EECTTCEEESSCEEC
T ss_pred CEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCc---EEcCCCEECCCcEEC
Confidence 344444444 22 4444 5778888888888888776521 110 0001123567888888 799999987 89999
Q ss_pred CCCEECCCcEEec
Q 010006 473 KNARIGDNVKIVN 485 (520)
Q Consensus 473 ~~~~Ig~~~~i~~ 485 (520)
+||.||+|+++..
T Consensus 274 d~a~IGagsvV~~ 286 (310)
T 3f1x_A 274 KGATVGGNIWVTE 286 (310)
T ss_dssp TTCEECSSCEECS
T ss_pred CCCEECCCCEECC
Confidence 9999999998863
No 157
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.50 E-value=4.7e-07 Score=89.30 Aligned_cols=79 Identities=23% Similarity=0.351 Sum_probs=44.3
Q ss_pred eEECCCcEEeeeEEeeeEECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEc-ceEECCCCEEC
Q 010006 400 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIK-RAIIDKNARIG 478 (520)
Q Consensus 400 ~~Ig~g~~I~~~~i~~s~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~-~~ii~~~~~Ig 478 (520)
+.||++++|+.. .+++||++|.||++|.|..++.+++...+. ..+.++||+++ .||.++.|. +++||++|.||
T Consensus 164 a~IG~gv~I~~g--~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~-~~~~~~IGd~v---~IGaga~Ilggv~IG~~a~IG 237 (289)
T 1t3d_A 164 AKIGRGIMLDHA--TGIVVGETAVIENDVSILQSVTLGGTGKSG-GDRHPKIREGV---MIGAGAKILGNIEVGRGAKIG 237 (289)
T ss_dssp CEECSSCEECSC--TTCEECTTCEECSSCEECTTCEEECCSSSC-SSCSCEECTTC---EECTTCEEESSCEECTTCEEC
T ss_pred CEEcCCEEECCC--CceEECCCcEECCCCEEcCCcEECCCcccc-CCCCeEECCCe---EECCCCEEecCcEECCCCEEC
Confidence 445555555520 145666666666666666665555421111 12445666666 566666664 56666666666
Q ss_pred CCcEEe
Q 010006 479 DNVKIV 484 (520)
Q Consensus 479 ~~~~i~ 484 (520)
+|+++.
T Consensus 238 agsvV~ 243 (289)
T 1t3d_A 238 AGSVVL 243 (289)
T ss_dssp TTCEEC
T ss_pred CCCEEc
Confidence 666665
No 158
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.47 E-value=8.5e-08 Score=97.86 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=28.8
Q ss_pred EECCCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCEEcceEECCCCEECCCcEEec
Q 010006 417 VVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVN 485 (520)
Q Consensus 417 ~Ig~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~ii~~~~~Ig~~~~i~~ 485 (520)
.||.+|.||++|.|...+.+..... ......++||+++ .||.++. .++.||++|.||++++|..
T Consensus 260 ~Ig~~vvIGdnv~Ig~ga~I~g~l~-g~~~~~VvIGdnv---~IGagAv-~GV~IGdgavIGAGsVVt~ 323 (387)
T 2rij_A 260 RISSSAIVGEGSDVGGGASILGVLS-GTSGNAISVGKAC---LLGANSV-TGIPLGDNCIVDAGIAVLE 323 (387)
T ss_dssp EECTTCEECTTCEECTTCEECCBCS-STTCCBCEECTTC---EECTTCE-ECSCBCTTCEECTTCEECT
T ss_pred EECCCCEECCCCEECCCceEcceec-CCCccCeEEeCCC---EECCCCc-CCcEECCCCEECCCCEECC
Confidence 4555555555555554443221110 0011234455555 4555555 4555555555555555543
No 159
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.46 E-value=2.9e-07 Score=90.01 Aligned_cols=28 Identities=7% Similarity=-0.034 Sum_probs=23.8
Q ss_pred cceEE--EEeCceeccccHHHHHHHHHhcC
Q 010006 205 VLEFL--VLAGDHLYRMDYERFIQAHRETD 232 (520)
Q Consensus 205 ~~~~L--vl~gD~l~~~dl~~ll~~h~~~~ 232 (520)
.|++| ++++|+|...+|.+++.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 47888 99999999999999999987643
No 160
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.42 E-value=2.2e-07 Score=88.08 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=21.4
Q ss_pred cceEECCCcEEee----eEEee--------eEECCCCEECCCCEEcccEE
Q 010006 398 TDSVIGEGCVIKN----CKIHH--------SVVGLRSCISEGAIIEDTLL 435 (520)
Q Consensus 398 ~~~~Ig~g~~I~~----~~i~~--------s~Ig~~~~Ig~~~~I~~~~i 435 (520)
.++.||++|+|+. ..+.+ +.++.++.||++|.|...+.
T Consensus 23 ~~v~IG~~t~I~~~~~~~~~~~~~~~i~~~~~i~~~v~IG~~~~I~~~v~ 72 (212)
T 3eev_A 23 PNIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDVDKLVIGSFCSIGSGAV 72 (212)
T ss_dssp TTEEECSSCEECCGGGCSCGGGGEETCCSSCSSSCCEEECSSCEECTTCE
T ss_pred CCeEECCCeEEccccCccccccceeEECCCccccCCcEECCCCEECCCCE
Confidence 4566777777662 11111 22556667777777766663
No 161
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.39 E-value=5.2e-07 Score=88.97 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=48.6
Q ss_pred cceEECCCcEEeeeEEeeeEEC--CCCEECCCCEEcccEEECCccccccccccccccCCCcceeeCCCCE---EcceEEC
Q 010006 398 TDSVIGEGCVIKNCKIHHSVVG--LRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSH---IKRAIID 472 (520)
Q Consensus 398 ~~~~Ig~g~~I~~~~i~~s~Ig--~~~~Ig~~~~I~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~---i~~~ii~ 472 (520)
.++.|++++.|+. ++.|+ .++.||++|+|++.+.+.. ++ .||.... .++++||
T Consensus 156 ~g~~I~p~a~IG~----gv~I~~g~gvvIG~~~~IG~~v~I~~---------gv---------tLg~~~~~~~~~~~~IG 213 (289)
T 1t3d_A 156 FQVDIHPAAKIGR----GIMLDHATGIVVGETAVIENDVSILQ---------SV---------TLGGTGKSGGDRHPKIR 213 (289)
T ss_dssp HSCEECTTCEECS----SCEECSCTTCEECTTCEECSSCEECT---------TC---------EEECCSSSCSSCSCEEC
T ss_pred cceEEcCCCEEcC----CEEECCCCceEECCCcEECCCCEEcC---------Cc---------EECCCccccCCCCeEEC
Confidence 4678899998886 44555 5778888887777666553 22 2332211 1346778
Q ss_pred CCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 473 KNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 473 ~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
+||.||.+++|.++. +||+++.|++|
T Consensus 214 d~v~IGaga~Ilggv------~IG~~a~IGag 239 (289)
T 1t3d_A 214 EGVMIGAGAKILGNI------EVGRGAKIGAG 239 (289)
T ss_dssp TTCEECTTCEEESSC------EECTTCEECTT
T ss_pred CCeEECCCCEEecCc------EECCCCEECCC
Confidence 888888887776533 34444555555
No 162
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.28 E-value=5.8e-07 Score=85.07 Aligned_cols=16 Identities=31% Similarity=0.505 Sum_probs=12.3
Q ss_pred eeEECCCCEECCCCEE
Q 010006 415 HSVVGLRSCISEGAII 430 (520)
Q Consensus 415 ~s~Ig~~~~Ig~~~~I 430 (520)
++.||++|.|+++|+|
T Consensus 58 ~v~IG~~~~I~~~v~i 73 (212)
T 3eev_A 58 KLVIGSFCSIGSGAVF 73 (212)
T ss_dssp CEEECSSCEECTTCEE
T ss_pred CcEECCCCEECCCCEE
Confidence 6677888888888776
No 163
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.25 E-value=0.00082 Score=70.36 Aligned_cols=260 Identities=13% Similarity=0.082 Sum_probs=148.4
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecCCccchhHHHHHHhHhC----CC-CeEEEEecc-ChhHHHHHHHHhhhcc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS----NI-SKIYVLTQF-NSASLNRHLSRAYASN 161 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~----gi-~~I~Iv~~~-~~~~i~~~l~~~~~~~ 161 (520)
.++..|+||||.||||+ ..-||.++|+...+++++..++++... |. =..+|.+++ ..+...++|++...++
T Consensus 75 ~kvavvlLaGGlGTRLG---~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~~~Fg 151 (484)
T 3gue_A 75 RQAVVLKLNGGLGTGMG---LNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKYPTLY 151 (484)
T ss_dssp TTEEEEEEECCCCGGGT---CSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGCHHHH
T ss_pred hhcEEEEEcCCcccccC---CCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhCcccC
Confidence 47999999999999997 468999999954459999999988652 32 245677764 5678889998744343
Q ss_pred CCC----CcCCCeEEEeecccC---CCC----CCC-ccCcHHHHHHH-----HHHhhhcCcceEEEEeCceeccccHHHH
Q 010006 162 MGG----YKNEGFVEVLAAQQS---PEN----PNW-FQGTADAVRQY-----LWLFEEHNVLEFLVLAGDHLYRMDYERF 224 (520)
Q Consensus 162 ~~~----~~~~~~v~vl~~~~~---~~~----~~~-~~Gt~~al~~~-----~~~l~~~~~~~~Lvl~gD~l~~~dl~~l 224 (520)
+.. .|.+..+..+..... ..+ ..| +.|.++-.... ++.+...+.+++.+...|.+...-=-.+
T Consensus 152 l~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp~~ 231 (484)
T 3gue_A 152 EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDVRL 231 (484)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCHHH
T ss_pred CCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCHHH
Confidence 311 112222222221110 000 113 24554432221 2334445678999999999665322446
Q ss_pred HHHHHhcCCcEEEEEEecCcccCcceEEEEeC---------CCC--CEEEeeeCCChhhhhhcccccccccCCchhhccC
Q 010006 225 IQAHRETDADITVAALPMDEKRATAFGLMKID---------EEG--RIIEFSEKPKGEQLKAMKVDTTILGLDDERAKEM 293 (520)
Q Consensus 225 l~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~d---------~~g--~V~~~~ekp~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (520)
+..+.++++++.+-+.+....+ ..-|+++.. .+| +++++.+-|...... .. ...+
T Consensus 232 lG~~~~~~~d~~~kvv~Kt~~d-ekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~-f~------------~~~g 297 (484)
T 3gue_A 232 LDYMHEKQLGFLMEVCRRTESD-KKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDS-FQ------------NIAK 297 (484)
T ss_dssp HHHHHHTTCSEEEEEEECCTTC-CSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHH-HT------------CTTT
T ss_pred HHHHHhcCCCEEEEEEECCCCC-CceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhh-hc------------CCCC
Confidence 7777888999887777754322 234433331 234 566777766543221 00 0011
Q ss_pred CceeeeeEEEEeHHHHHHHHhhh--CCCC-------------CCc-----cccchHhhhhCCceEEEEEec-ceEEeCCC
Q 010006 294 PYIASMGIYVISKDVMLNLLRDK--FPGA-------------NDF-----GSEVIPGATSIGMRVQAYLYD-GYWEDIGT 352 (520)
Q Consensus 294 ~~l~~~GIyifs~~vl~~ll~~~--~~~~-------------~~~-----~~dil~~li~~~~~v~a~~~~-g~w~dI~t 352 (520)
.-+.+++-.+++-..++++++.. .... .+. .+-.+-.++..-.+..++.+. ..+..+.+
T Consensus 298 ~~~FNtnNi~~~l~~l~~~l~~~~g~~~Lp~~vn~K~id~~k~~~~~~iqlE~~~~d~~~~~~~~~~ieV~R~rF~PvKn 377 (484)
T 3gue_A 298 HCFFNTNNIWINLMELKKMMDEQLGVLRLPVMRNPKTVNPQDSQSTKVYQLEVAMGAAISLFDRSEAVVVPRERFAPVKT 377 (484)
T ss_dssp SCEEEEEEEEEEHHHHHHHHHHTTTCCCCCCEEEEEESSTTCTTSCEEEEEECCGGGGGTTSSSEEEEECCGGGCCCCSS
T ss_pred ceEeEeeeEEEEHHHHHHHHHhccCcCCCCcEeccceecCCCCCCCCEeehHHHHHHHHHhCCccEEEEEChhhcccccc
Confidence 12448888899988887787653 1100 000 011222222222355566554 46888899
Q ss_pred HHHHHHhhhhcc
Q 010006 353 IEAFYNANLGIT 364 (520)
Q Consensus 353 ~~dy~~An~~~l 364 (520)
..|++.....+.
T Consensus 378 ~sdLl~~~Sdly 389 (484)
T 3gue_A 378 CSDLLALRSDAY 389 (484)
T ss_dssp HHHHHHHHSTTE
T ss_pred chHHHHHhhhce
Confidence 999887755443
No 164
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.21 E-value=9.3e-07 Score=84.06 Aligned_cols=101 Identities=17% Similarity=0.112 Sum_probs=47.7
Q ss_pred cceEECCCcEEee--------eEEe-eeEECCCCEECCCCEEcccEEECC---cccccccc-ccccccCCCc-ceeeCCC
Q 010006 398 TDSVIGEGCVIKN--------CKIH-HSVVGLRSCISEGAIIEDTLLMGA---DYYETDAD-RRFLAAKGSV-PIGIGKN 463 (520)
Q Consensus 398 ~~~~Ig~g~~I~~--------~~i~-~s~Ig~~~~Ig~~~~I~~~~i~~~---~~~~~~~~-~~~~~~~~~~-~~~Ig~~ 463 (520)
.++.||+.++|+. +.+. .++|+.++.||++|.|...+.+.. ++.-.... ..+.++++.. .+.+..+
T Consensus 33 ~~i~IG~~t~i~~~~~~~~~~~vi~~~~~i~~~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~ 112 (219)
T 4e8l_A 33 ENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKD 112 (219)
T ss_dssp SSEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTT
T ss_pred CCEEECCccEEcCCcCceecceEEeecceeCCCEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCccccccccccc
Confidence 4577788888875 2232 233456667777777766655421 11000000 1112222210 0011112
Q ss_pred CEE-cceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 464 SHI-KRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 464 ~~i-~~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
..+ .+++||++|.||.+++|.++ .++|++++|+++
T Consensus 113 ~~~~g~v~Igd~v~IG~~a~I~~g------v~IG~~~~Igag 148 (219)
T 4e8l_A 113 LPLKGDIEIGNDVWIGRDVTIMPG------VKIGDGAIIAAE 148 (219)
T ss_dssp SCCCCCEEECSSCEECTTCEECTT------CEECTTCEECTT
T ss_pred ccccCCcEECCCeEECCCCEEcCC------CEECCCCEECCC
Confidence 222 35777777777777777543 344445555555
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.14 E-value=1.2e-06 Score=82.99 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=12.5
Q ss_pred eeeEECCCCEECCCCEE
Q 010006 414 HHSVVGLRSCISEGAII 430 (520)
Q Consensus 414 ~~s~Ig~~~~Ig~~~~I 430 (520)
....||++|.|+++|+|
T Consensus 55 ~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 55 DKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp CCEEECSSCEECTTCEE
T ss_pred cCEEEcCCCEECCCCEE
Confidence 35677888888887776
No 166
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.13 E-value=3e-06 Score=80.52 Aligned_cols=27 Identities=19% Similarity=0.197 Sum_probs=17.8
Q ss_pred CcEEee-eEEe-eeEECCCCEECCCCEEc
Q 010006 405 GCVIKN-CKIH-HSVVGLRSCISEGAIIE 431 (520)
Q Consensus 405 g~~I~~-~~i~-~s~Ig~~~~Ig~~~~I~ 431 (520)
+|++.. +.+. +..||++|.|+++|+|.
T Consensus 53 ~~vi~~~~~i~~~v~IG~~~~I~~gv~I~ 81 (219)
T 4e8l_A 53 DQVLYHYEVIGDKLIIGRFCSIGPGTTFI 81 (219)
T ss_dssp GGEESCCTTTCCCEEECSSCEECTTCEEE
T ss_pred ceEEeecceeCCCEEECCCCEEcCCCEEE
Confidence 344444 3333 67888888888888873
No 167
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.13 E-value=1.1e-06 Score=83.09 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=17.1
Q ss_pred ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccC
Q 010006 468 RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSG 504 (520)
Q Consensus 468 ~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~ 504 (520)
+++||++|.||.++.|.+ ++++|++++|+++
T Consensus 113 ~v~Ig~~v~IG~~a~I~~------gv~Ig~~~~Igag 143 (209)
T 1mr7_A 113 DTIIGNDVWIGKDVVIMP------GVKIGDGAIVAAN 143 (209)
T ss_dssp CEEECSSCEECTTCEECT------TCEECTTCEECTT
T ss_pred CcEECCCCEEcCCCEEcC------CCEECCCCEEcCC
Confidence 466666666666666654 2344445555555
No 168
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.04 E-value=5.2e-06 Score=78.35 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=24.1
Q ss_pred eeeCCCCEEc-ceEECCCCEECCCcEEecCCCcCCcccccCCeEEccCe
Q 010006 458 IGIGKNSHIK-RAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGI 505 (520)
Q Consensus 458 ~~Ig~~~~i~-~~ii~~~~~Ig~~~~i~~~~~v~~~~~~~~~~~I~~~~ 505 (520)
+.||+++.|. +++|..+++||++++|..++.+... +.+++++...+
T Consensus 114 v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~--v~~~~i~~G~P 160 (209)
T 1mr7_A 114 TIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKD--IAPYMLAGGNP 160 (209)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEEETT
T ss_pred cEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCC--CCCCeEEEeeC
Confidence 3555555554 5555555555555555555444432 34455554443
No 169
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=97.93 E-value=3.2e-05 Score=73.05 Aligned_cols=39 Identities=8% Similarity=-0.037 Sum_probs=26.2
Q ss_pred cceEECCCcEEee----eEEeeeEE--------CCCCEECCCCEEcccEEE
Q 010006 398 TDSVIGEGCVIKN----CKIHHSVV--------GLRSCISEGAIIEDTLLM 436 (520)
Q Consensus 398 ~~~~Ig~g~~I~~----~~i~~s~I--------g~~~~Ig~~~~I~~~~i~ 436 (520)
.+..||++++|.+ +.+.++++ ...+.||++|.|...+.+
T Consensus 21 ~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~i 71 (212)
T 1xat_A 21 PNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAF 71 (212)
T ss_dssp TTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEE
T ss_pred CCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCEE
Confidence 4567788777763 33334444 467889999999888654
No 170
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.26 E-value=0.0059 Score=65.61 Aligned_cols=216 Identities=13% Similarity=0.125 Sum_probs=119.1
Q ss_pred cceEEEEEeCCCCCCCCccccCCCccceecC---CccchhHHHHHHhHh-CCC-CeEEEEec-cChhHHHHHHHHhhhcc
Q 010006 88 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLG---ANYRLIDIPVSNCLN-SNI-SKIYVLTQ-FNSASLNRHLSRAYASN 161 (520)
Q Consensus 88 ~~~~aIILAaG~GtRl~PlT~~~pK~Llpv~---G~~plI~~~l~~l~~-~gi-~~I~Iv~~-~~~~~i~~~l~~~~~~~ 161 (520)
.++..|+||||.||||+ ...||.++|++ |+ +++++.++++.+ .|. =..+|.+. ...+...++|.+ |...
T Consensus 113 ~kvavvllaGGlGTRLG---~~~pK~~lpv~~~s~k-s~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~-fgl~ 187 (630)
T 3ogz_A 113 CKTVFVLVAGGLGERLG---YSSIKVSLPVETATNT-TYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRE-LQLE 187 (630)
T ss_dssp GGEEEEEECCCEEGGGT---EEEEGGGSBSCTTTCC-BHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHH-TTCC
T ss_pred hhceEEEecCCcccccC---CCCCcccceecCCCCC-cHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHH-hCCC
Confidence 47999999999999998 46899999995 66 999999999976 342 23466665 456888999988 4321
Q ss_pred CC--CCcCCCeEEEeeccc------CCCCCCC-ccCcHHHHHH-----------------------HHHHhhhcCcceEE
Q 010006 162 MG--GYKNEGFVEVLAAQQ------SPENPNW-FQGTADAVRQ-----------------------YLWLFEEHNVLEFL 209 (520)
Q Consensus 162 ~~--~~~~~~~v~vl~~~~------~~~~~~~-~~Gt~~al~~-----------------------~~~~l~~~~~~~~L 209 (520)
-. ..|..+.+..+.... ......| +.|.++-... .++.+...+.+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 00 011111122221000 0001112 2455442222 23334444678899
Q ss_pred EEeCce-eccccHHHHHHHHHhcCCcEEEEEEecCcccCcceEEEEe--CCCCCE-----EEeeeCCChhhhhhcccccc
Q 010006 210 VLAGDH-LYRMDYERFIQAHRETDADITVAALPMDEKRATAFGLMKI--DEEGRI-----IEFSEKPKGEQLKAMKVDTT 281 (520)
Q Consensus 210 vl~gD~-l~~~dl~~ll~~h~~~~a~~tl~~~~~~~~~~~~~g~v~~--d~~g~V-----~~~~ekp~~~~~~~~~~~~~ 281 (520)
+...|. +...---.++..+.++++++.+-+.+.. +...-|.++. ..+|+. +++.|-+...... . +.
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r~--p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~--~-~~- 341 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPRV--PKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRAL--N-KD- 341 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECCC--SSCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEECC--CCcceeeEEEEecCCCceeeeeEEEeccCCHhHhhc--c-CC-
Confidence 999999 4343333467777888899877776643 2334454443 234544 4444332221100 0 00
Q ss_pred cccC-CchhhccCCceeeeeEEEEeHHHHHHHHhh
Q 010006 282 ILGL-DDERAKEMPYIASMGIYVISKDVMLNLLRD 315 (520)
Q Consensus 282 ~~~~-~~~~~~~~~~l~~~GIyifs~~vl~~ll~~ 315 (520)
-+. -........+..++..++|+-+.+.+.+..
T Consensus 342 -~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 342 -GGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp ----------CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred -CccccccccccccccccceeeeEEHHHHHHHHHh
Confidence 000 000011223445899999998866555553
No 171
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=96.41 E-value=0.0073 Score=56.39 Aligned_cols=105 Identities=15% Similarity=0.188 Sum_probs=70.3
Q ss_pred cceEEEEEe--CCCCCCCCccccCCCccceecCCccchhHHHHHHhHhCCCCeE-EEEeccChhHHHHHHHHhhhccCCC
Q 010006 88 RSVLGIILG--GGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKI-YVLTQFNSASLNRHLSRAYASNMGG 164 (520)
Q Consensus 88 ~~~~aIILA--aG~GtRl~PlT~~~pK~Llpv~G~~plI~~~l~~l~~~gi~~I-~Iv~~~~~~~i~~~l~~~~~~~~~~ 164 (520)
+.|.+||++ |...|||.|. ..+......++ |||+|+++.+..++++++ ++++++... . . + +
T Consensus 2 ~~~~~vip~k~g~~KtRL~~~---l~~~~~~~l~~-~ll~~vl~~l~~~~~~~v~vvv~~~~~~--~----~-~-~---- 65 (211)
T 2i5e_A 2 NAMRAVIPYKKAGAKSRLSPV---LSLQEREEFVE-LMLNQVISSLKGAGIEQVDILSPSVYGL--E----E-M-T---- 65 (211)
T ss_dssp CCCEEEEECCCTTTTGGGTTT---SCHHHHHHHHH-HHHHHHHHHHHHTTCSEEEEEESSCTTC--S----S-C-C----
T ss_pred CceEEEEEeCCCCCccccCcc---CCHHHHHHHHH-HHHHHHHHHHHHcCCceEEEEEcCcHHH--H----h-h-c----
Confidence 358899999 7788888742 11111213345 999999999999999999 888875431 1 1 0 1
Q ss_pred CcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHHhhhcCcceEEEEeCce-eccc-cHHHHHH
Q 010006 165 YKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEFLVLAGDH-LYRM-DYERFIQ 226 (520)
Q Consensus 165 ~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~-l~~~-dl~~ll~ 226 (520)
+ +.++. + + .|.++++..+...+ .+.++++.||+ ++.. .+..+++
T Consensus 66 --~---~~~v~--~----~---~gl~~sl~~a~~~~----~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 --E---ARVLL--D----E---KDLNEALNRYLKEA----EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp --S---SEEEE--C----C---SCHHHHHHHHHHHC----CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred --C---CEEEE--C----C---CCHHHHHHHHHHhc----CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 1 22322 1 1 57888999887655 26899999999 5554 4777766
No 172
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=87.56 E-value=2.2 Score=40.46 Aligned_cols=89 Identities=3% Similarity=-0.084 Sum_probs=58.9
Q ss_pred cchhHHHHHHhHhCCCCeEEEEeccChhHHH--HHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHHHH
Q 010006 121 YRLIDIPVSNCLNSNISKIYVLTQFNSASLN--RHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLW 198 (520)
Q Consensus 121 ~plI~~~l~~l~~~gi~~I~Iv~~~~~~~i~--~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~ 198 (520)
.+|+.++++.+...+...++++++.....+. ..+.. ...+ +.. | |..|.+.++..+..
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~~~~~~~~~~~-----------~~~~-~~~--q------~~~gLg~rl~~a~~ 96 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDADLPEKFKAWLG-----------PQHM-FAA--Q------QGLDLGERMKHAMQ 96 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTTHHHHHHHHHC-----------TTSE-EEE--C------CSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchhhhhhhhhhcc-----------CCcE-Eec--C------CCCCHHHHHHHHHH
Confidence 3899999999999988877777766554432 21111 0111 111 1 22678899999886
Q ss_pred HhhhcCcceEEEEeCce--eccccHHHHHHHHH
Q 010006 199 LFEEHNVLEFLVLAGDH--LYRMDYERFIQAHR 229 (520)
Q Consensus 199 ~l~~~~~~~~Lvl~gD~--l~~~dl~~ll~~h~ 229 (520)
.+-....+.++++.+|+ +...++.++++...
T Consensus 97 ~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 97 KAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp HHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTT
T ss_pred HHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhc
Confidence 65322357899999999 44566888887654
No 173
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=86.39 E-value=5.6 Score=36.43 Aligned_cols=98 Identities=15% Similarity=0.118 Sum_probs=59.9
Q ss_pred chhHHHHHHhHhCCCC--eEEEEeccChhHHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHHHHH
Q 010006 122 RLIDIPVSNCLNSNIS--KIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWL 199 (520)
Q Consensus 122 plI~~~l~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~~ 199 (520)
..|...|+.+.+.... +|+||-....+...+.+.+... ....+.++.. .+ .|.+.+...++..
T Consensus 18 ~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~-------~~~~i~~i~~----~n----~G~~~a~N~g~~~ 82 (240)
T 3bcv_A 18 KYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA-------QYPNIKVIHK----KN----AGLGMACNSGLDV 82 (240)
T ss_dssp TTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH-------HCSSEEEEEC----CC----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHh-------hCCCEEEEEC----CC----CChHHHHHHHHHH
Confidence 5788888888765432 5666654333322222322110 0112555531 22 6888888888776
Q ss_pred hhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCcEEE
Q 010006 200 FEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDADITV 237 (520)
Q Consensus 200 l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~~tl 237 (520)
.. .+.++++..|.+...+ |..+++...+.+.++.+
T Consensus 83 a~---g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 83 AT---GEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp CC---SSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred cC---CCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 54 4789999999987776 88888887766666543
No 174
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=81.11 E-value=25 Score=32.23 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=62.0
Q ss_pred eecCCccchhHHHHHHhHhCCCC--eEEEEeccChhHHHHHHHHhhhccCCCCcCCCeEEEeecccCC-----CCCCCcc
Q 010006 115 VPLGANYRLIDIPVSNCLNSNIS--KIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP-----ENPNWFQ 187 (520)
Q Consensus 115 lpv~G~~plI~~~l~~l~~~gi~--~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~-----~~~~~~~ 187 (520)
+|.-+....|..+|+.+.+.... +|+||-....+...+.+.+... ...+.++...... .+ .
T Consensus 7 Ip~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~--------~~~i~~i~~~~~~~~~~~~n----~ 74 (255)
T 1qg8_A 7 MTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN--------DNRVRFYQSDISGVKERTEK----T 74 (255)
T ss_dssp EEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG--------STTEEEEECCCCSHHHHHSS----C
T ss_pred EEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh--------cCCEEEEecccccccccccc----c
Confidence 34433336888899988775433 5666665444555555554211 1224554332000 11 6
Q ss_pred CcHHHHHHHHHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhc
Q 010006 188 GTADAVRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRET 231 (520)
Q Consensus 188 Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~ 231 (520)
|.+.+...++.... .+.++++.+|.+...+ +..+++...+.
T Consensus 75 G~~~a~N~gi~~a~---g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 75 RYAALINQAIEMAE---GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHHHHHHHHHCC---CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHcC---CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 77778777776554 4789999999987776 88888877664
No 175
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=65.58 E-value=78 Score=32.22 Aligned_cols=97 Identities=12% Similarity=0.044 Sum_probs=58.3
Q ss_pred chhHHHHHHhHhCCC----CeEEEEeccChh-HHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHH
Q 010006 122 RLIDIPVSNCLNSNI----SKIYVLTQFNSA-SLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQY 196 (520)
Q Consensus 122 plI~~~l~~l~~~gi----~~I~Iv~~~~~~-~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~ 196 (520)
..|..+|+.+.+.-. .+|+||-....+ ...+.+.+... .+. ..+.++... .+ .|-+.+...+
T Consensus 43 ~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~-----~~~-~~v~vi~~~---~n----~G~~~a~N~g 109 (472)
T 1xhb_A 43 STLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK-----KLK-VPVHVIRME---QR----SGLIRARLKG 109 (472)
T ss_dssp HHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH-----SSS-SCEEEEECS---SC----CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH-----HCC-CcEEEEECC---CC----CChHHHHHHH
Confidence 467777777766432 377777654332 23333333110 001 025555432 12 6888888888
Q ss_pred HHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCc
Q 010006 197 LWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (520)
Q Consensus 197 ~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~ 234 (520)
+.... .+.++++..|.....+ |..+++...+....
T Consensus 110 ~~~A~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 145 (472)
T 1xhb_A 110 AAVSR---GQVITFLDAHCECTAGWLEPLLARIKHDRRT 145 (472)
T ss_dssp HHHCC---SSEEEEEESSEEECTTCHHHHHHHHHHCTTE
T ss_pred HHhcc---CCeEEEECCCeEeCccHHHHHHHHHHhCCCE
Confidence 76654 4789999999987766 88898888765543
No 176
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=52.78 E-value=86 Score=33.23 Aligned_cols=96 Identities=7% Similarity=-0.044 Sum_probs=58.8
Q ss_pred chhHHHHHHhHhCC---CCeEEEEeccChhHHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHHHH
Q 010006 122 RLIDIPVSNCLNSN---ISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLW 198 (520)
Q Consensus 122 plI~~~l~~l~~~g---i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~~ 198 (520)
..|..+|+.+.... --+|+||-....+...+.+.+... ...+.++... +. ..|.+.++..++.
T Consensus 106 ~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~--------~~~i~~i~~~----~~--~~g~~~a~N~g~~ 171 (625)
T 2z86_A 106 KILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFES--------LLNIKYVRQK----DY--GYQLCAVRNLGLR 171 (625)
T ss_dssp HHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTT--------TSCEEEEEEC----CC--SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhh--------cCCeEEEEeC----CC--CcchhHHHHHHHH
Confidence 57788888887652 356777765544445555544110 1124444321 11 1357778877776
Q ss_pred HhhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCc
Q 010006 199 LFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (520)
Q Consensus 199 ~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~ 234 (520)
... .+.++++.+|.+...+ +..+++.+.+....
T Consensus 172 ~a~---g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~ 205 (625)
T 2z86_A 172 AAK---YNYVAILDCDMAPNPLWVQSYMELLAVDDNV 205 (625)
T ss_dssp HCC---SSEEEEECTTEEECTTHHHHHHHHHHHCTTE
T ss_pred hCC---cCEEEEECCCCCCCHHHHHHHHHHHhcCCce
Confidence 554 4789999999988776 88888877665543
No 177
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=51.83 E-value=71 Score=34.57 Aligned_cols=101 Identities=14% Similarity=0.088 Sum_probs=62.1
Q ss_pred ecCCccchhHHHHHHhHhC-----CCCeEEEEeccCh-----hHHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCC
Q 010006 116 PLGANYRLIDIPVSNCLNS-----NISKIYVLTQFNS-----ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNW 185 (520)
Q Consensus 116 pv~G~~plI~~~l~~l~~~-----gi~~I~Iv~~~~~-----~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~ 185 (520)
|.-+....|...|+.+.+. ...+|+||=+... ..+.+.+....+ .+.++.. .+
T Consensus 187 ptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~~----------~I~vI~~----~N--- 249 (657)
T 4fix_A 187 PTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLGS----------RLSIHDQ----PN--- 249 (657)
T ss_dssp CBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHGG----------GEEEEEC----CC---
T ss_pred EecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcCC----------CEEEEEC----CC---
Confidence 3333336888888888764 2346777754332 234444443211 2555532 12
Q ss_pred ccCcHHHHHHHHHHhhhc-CcceEEEEeCceecccc-HHHHHHHHHhcCCc
Q 010006 186 FQGTADAVRQYLWLFEEH-NVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (520)
Q Consensus 186 ~~Gt~~al~~~~~~l~~~-~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~ 234 (520)
.|-+.+.-.++...... ..+.++++..|.+...+ |..+++........
T Consensus 250 -~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 250 -LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp -CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred -CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 67888887777665432 35789999999988776 88888887765443
No 178
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=51.51 E-value=97 Score=31.88 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=55.8
Q ss_pred hhHHHHHHhHhCCC----CeEEEEeccCh-hHHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHHH
Q 010006 123 LIDIPVSNCLNSNI----SKIYVLTQFNS-ASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYL 197 (520)
Q Consensus 123 lI~~~l~~l~~~gi----~~I~Iv~~~~~-~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~~ 197 (520)
.|...|+.+.+.-. .+|+||-.... ..+...+.+ ...+.++... .+ .|.+.+...++
T Consensus 81 ~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~-----------~~~v~vi~~~---~n----~G~~~A~N~G~ 142 (501)
T 2ffu_A 81 ALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK-----------IEKVRVLRND---RR----EGLMRSRVRGA 142 (501)
T ss_dssp HHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG-----------BTTEEEEECS---SC----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc-----------CCCEEEEECC---CC----cCHHHHHHHHH
Confidence 66777777655322 27777754332 233333322 1125555422 12 67788888887
Q ss_pred HHhhhcCcceEEEEeCceecccc-HHHHHHHHHhcCCc
Q 010006 198 WLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETDAD 234 (520)
Q Consensus 198 ~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~a~ 234 (520)
.... .+.++++.+|.....+ |..+++...+....
T Consensus 143 ~~A~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~ 177 (501)
T 2ffu_A 143 DAAQ---AKVLTFLDSHCECNEHWLEPLLERVAEDRTR 177 (501)
T ss_dssp HHCC---SSEEEECCSSEEECTTCHHHHHHHHHHCTTE
T ss_pred HhcC---CCEEEEECCCcccCccHHHHHHHHHHhCCCe
Confidence 6654 4788899999977766 88999888765554
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=51.49 E-value=93 Score=32.96 Aligned_cols=99 Identities=21% Similarity=0.234 Sum_probs=60.2
Q ss_pred eecCCccchhHHHHHHhHhCCC--CeEEEEeccChhHHHHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHH
Q 010006 115 VPLGANYRLIDIPVSNCLNSNI--SKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 192 (520)
Q Consensus 115 lpv~G~~plI~~~l~~l~~~gi--~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~a 192 (520)
+|..+....|..+|+.+.+... -+|+||-+...+...+.+.+... ....+.++.. .+ .|.+.+
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~-------~~~~i~~~~~----~n----~G~~~a 445 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYA-------NHPRVRFISQ----KN----KGIGSA 445 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHT-------TCTTEEEEEE----CC----CCHHHH
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHh-------hCCcEEEEeC----CC----CCHHHH
Confidence 3433334688899998876433 26666654433333344443211 0112455532 22 688888
Q ss_pred HHHHHHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhc
Q 010006 193 VRQYLWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRET 231 (520)
Q Consensus 193 l~~~~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~ 231 (520)
+..++.... .+.++++.+|.+...+ |..+++.+.+.
T Consensus 446 ~n~g~~~a~---g~~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 446 SNTAVRLCR---GFYIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp HHHHHHHCC---SSEEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred HHHHHHhcC---CCEEEEECCCcccChhHHHHHHHHHHhC
Confidence 888876654 4789999999987766 88888777554
No 180
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=49.47 E-value=1e+02 Score=32.46 Aligned_cols=94 Identities=12% Similarity=0.054 Sum_probs=56.9
Q ss_pred chhHHHHHHhHhCCC-C---eEEEEeccChhHH-HHHHHHhhhccCCCCcCCCeEEEeecccCCCCCCCccCcHHHHHHH
Q 010006 122 RLIDIPVSNCLNSNI-S---KIYVLTQFNSASL-NRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQY 196 (520)
Q Consensus 122 plI~~~l~~l~~~gi-~---~I~Iv~~~~~~~i-~~~l~~~~~~~~~~~~~~~~v~vl~~~~~~~~~~~~~Gt~~al~~~ 196 (520)
..|..+|+.+.+... . +|+||-....+.. .+.+.+... ....+.++... .+ .|-+.+...+
T Consensus 126 ~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~-------~~~~v~vi~~~---~n----~G~~~A~N~G 191 (570)
T 2d7i_A 126 SSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA-------LFPSVRILRTK---KR----EGLIRTRMLG 191 (570)
T ss_dssp HHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT-------TSTTEEEEECS---SC----CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH-------hCCeEEEEECC---CC----CCHHHHHHHH
Confidence 467777877765332 2 7777765332222 333333111 01125555432 12 6888888888
Q ss_pred HHHhhhcCcceEEEEeCceecccc-HHHHHHHHHhcC
Q 010006 197 LWLFEEHNVLEFLVLAGDHLYRMD-YERFIQAHRETD 232 (520)
Q Consensus 197 ~~~l~~~~~~~~Lvl~gD~l~~~d-l~~ll~~h~~~~ 232 (520)
+.... .+.++++..|..+..+ |..+++...+..
T Consensus 192 ~~~A~---gd~i~fLD~D~~~~p~~L~~ll~~l~~~~ 225 (570)
T 2d7i_A 192 ASVAT---GDVITFLDSHCEANVNWLPPLLDRIARNR 225 (570)
T ss_dssp HHHCC---SSEEEECCSSEEECTTCSHHHHHHHHHCT
T ss_pred HHhcC---CCEEEEEcCCccccccHHHHHHHHHHhCC
Confidence 76654 4788899999977766 888888876644
No 181
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=46.76 E-value=95 Score=29.96 Aligned_cols=101 Identities=10% Similarity=0.027 Sum_probs=56.9
Q ss_pred chhHHHHHHhHhC--C-CCeEEEEeccChhHHHHHHHHhhhccCCCCcCCCeEEEeecc-cCCCCCCCccCcHHHHHHHH
Q 010006 122 RLIDIPVSNCLNS--N-ISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQ-QSPENPNWFQGTADAVRQYL 197 (520)
Q Consensus 122 plI~~~l~~l~~~--g-i~~I~Iv~~~~~~~i~~~l~~~~~~~~~~~~~~~~v~vl~~~-~~~~~~~~~~Gt~~al~~~~ 197 (520)
..|..+|+.+.+. . ..+|+||-....+...+.+.+ +. ......+... ....+ .|-+.++..++
T Consensus 61 ~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~-~~--------~~~~~~~~~~~~~~~n----~G~~~a~n~g~ 127 (329)
T 3ckj_A 61 DTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVA-AG--------ARVVSREQALPEVPIR----PGKGEALWRSL 127 (329)
T ss_dssp TTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHH-TT--------CEEEEHHHHCTTSCCC----CSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHH-hh--------hhhccceeeeccCCCC----CCHHHHHHHHH
Confidence 4566666666553 2 357888765444444444444 11 0001100000 01122 78888988888
Q ss_pred HHhhhcCcceEEEEeCcee-cccc-HHHHHHHHHh-cCCcEEEE
Q 010006 198 WLFEEHNVLEFLVLAGDHL-YRMD-YERFIQAHRE-TDADITVA 238 (520)
Q Consensus 198 ~~l~~~~~~~~Lvl~gD~l-~~~d-l~~ll~~h~~-~~a~~tl~ 238 (520)
.... .+.++++.+|.+ +..+ +..+++...+ .+.+++..
T Consensus 128 ~~a~---gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 128 AASR---GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp HHCC---CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred HhCC---CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 6654 478999999998 7766 8888887544 34554443
No 182
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=35.40 E-value=1.2e+02 Score=30.24 Aligned_cols=51 Identities=20% Similarity=0.143 Sum_probs=37.9
Q ss_pred cCcHHHHHHHHHHhhhcCcceEEEEeCcee-cccc-HHHHHHHHHhc-CCcEEEEEE
Q 010006 187 QGTADAVRQYLWLFEEHNVLEFLVLAGDHL-YRMD-YERFIQAHRET-DADITVAAL 240 (520)
Q Consensus 187 ~Gt~~al~~~~~~l~~~~~~~~Lvl~gD~l-~~~d-l~~ll~~h~~~-~a~~tl~~~ 240 (520)
.|.+.++..++.... .+.++++.+|.. ...+ +..+++...+. +.+++....
T Consensus 165 ~G~g~A~n~G~~~A~---gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 165 HGKGDAMWRALSVTR---GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp CSHHHHHHHHTTTCC---SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred CCHHHHHHHHHHhcC---CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 788889888875543 478889999998 6665 88888887664 567665544
No 183
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=26.38 E-value=74 Score=29.89 Aligned_cols=22 Identities=5% Similarity=0.028 Sum_probs=17.7
Q ss_pred chhHHHHHHhHhCCCCeEEEEe
Q 010006 122 RLIDIPVSNCLNSNISKIYVLT 143 (520)
Q Consensus 122 plI~~~l~~l~~~gi~~I~Iv~ 143 (520)
|-+.-.++.|...|+++|+|+-
T Consensus 65 P~i~~al~~l~~~G~~~ivV~P 86 (269)
T 2xvy_A 65 PSPAEALAGMAEEGFTHVAVQS 86 (269)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEEe
Confidence 7888888888888888887764
Done!