Query 010008
Match_columns 520
No_of_seqs 409 out of 3446
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 19:57:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 8E-117 2E-121 854.0 38.8 452 68-520 15-475 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 1E-106 3E-111 797.7 42.5 408 72-519 5-413 (413)
3 PLN02271 serine hydroxymethylt 100.0 8.8E-99 2E-103 785.8 45.0 446 69-520 124-584 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 5.3E-90 1.1E-94 705.3 31.4 391 74-464 1-399 (399)
5 PLN03226 serine hydroxymethylt 100.0 5.7E-78 1.2E-82 639.8 46.4 449 69-520 10-466 (475)
6 PRK13580 serine hydroxymethylt 100.0 4.5E-78 9.7E-83 629.6 42.6 424 72-519 28-487 (493)
7 PTZ00094 serine hydroxymethylt 100.0 1.9E-64 4E-69 537.5 46.9 442 70-520 11-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 1.4E-55 3E-60 464.3 44.8 412 69-518 4-416 (416)
9 PRK00011 glyA serine hydroxyme 100.0 6.9E-50 1.5E-54 422.3 44.4 412 70-519 2-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 4.2E-47 9E-52 399.3 42.3 383 76-470 2-385 (402)
11 COG0436 Aspartate/tyrosine/aro 100.0 7.5E-31 1.6E-35 273.5 33.1 339 94-469 29-390 (393)
12 COG0520 csdA Selenocysteine ly 100.0 1.8E-30 3.9E-35 270.5 31.9 348 95-469 23-404 (405)
13 PRK13238 tnaA tryptophanase/L- 100.0 2.6E-28 5.7E-33 259.2 30.5 342 94-474 37-437 (460)
14 cd06451 AGAT_like Alanine-glyo 100.0 7.9E-28 1.7E-32 248.8 33.3 331 96-468 1-355 (356)
15 COG1104 NifS Cysteine sulfinat 100.0 2.7E-28 6E-33 245.9 28.6 339 101-472 9-379 (386)
16 PRK10874 cysteine sulfinate de 100.0 7.4E-28 1.6E-32 253.2 32.6 344 94-469 19-397 (401)
17 TIGR03392 FeS_syn_CsdA cystein 100.0 2.4E-27 5.3E-32 249.0 33.4 343 95-469 17-394 (398)
18 PRK09295 bifunctional cysteine 100.0 2.1E-27 4.5E-32 250.2 31.9 345 95-469 24-403 (406)
19 TIGR01979 sufS cysteine desulf 100.0 5.6E-27 1.2E-31 246.6 34.0 344 95-469 19-400 (403)
20 cd06453 SufS_like Cysteine des 100.0 9.7E-27 2.1E-31 242.1 31.2 335 100-464 6-373 (373)
21 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.6E-26 3.5E-31 242.6 32.2 337 96-464 19-397 (397)
22 PLN02855 Bifunctional selenocy 100.0 1.2E-26 2.7E-31 245.7 31.5 346 95-471 33-419 (424)
23 TIGR03402 FeS_nifS cysteine de 100.0 3.4E-26 7.3E-31 238.8 31.5 341 100-470 6-372 (379)
24 TIGR01977 am_tr_V_EF2568 cyste 100.0 4.3E-26 9.3E-31 237.5 32.1 335 104-466 11-375 (376)
25 COG1168 MalY Bifunctional PLP- 100.0 4.6E-26 9.9E-31 225.6 29.6 334 94-462 26-382 (388)
26 PLN02409 serine--glyoxylate am 100.0 8.4E-26 1.8E-30 237.4 33.6 333 96-470 11-372 (401)
27 PRK02948 cysteine desulfurase; 100.0 4.5E-26 9.7E-31 238.0 30.6 340 100-469 7-373 (381)
28 PLN00175 aminotransferase fami 100.0 1.2E-25 2.7E-30 237.0 33.7 359 71-469 33-412 (413)
29 cd00617 Tnase_like Tryptophana 100.0 7.8E-26 1.7E-30 237.4 30.1 312 131-474 49-412 (431)
30 PF00266 Aminotran_5: Aminotra 100.0 5.9E-26 1.3E-30 236.3 28.9 332 100-460 6-371 (371)
31 TIGR03403 nifS_epsilon cystein 99.9 3E-25 6.4E-30 231.9 32.4 340 100-470 6-375 (382)
32 PLN02651 cysteine desulfurase 99.9 1.3E-25 2.9E-30 233.1 27.6 324 100-457 6-363 (364)
33 PRK08960 hypothetical protein; 99.9 9.5E-25 2.1E-29 228.6 33.0 336 93-468 32-385 (387)
34 TIGR01822 2am3keto_CoA 2-amino 99.9 8.8E-25 1.9E-29 229.1 32.2 333 94-469 39-388 (393)
35 PRK07681 aspartate aminotransf 99.9 2E-24 4.4E-29 227.0 34.9 333 94-466 33-384 (399)
36 TIGR02326 transamin_PhnW 2-ami 99.9 2E-24 4.4E-29 224.0 34.4 332 95-468 4-360 (363)
37 PRK12414 putative aminotransfe 99.9 9.2E-25 2E-29 228.4 31.8 351 74-465 11-382 (384)
38 PRK08361 aspartate aminotransf 99.9 1.6E-24 3.5E-29 227.1 32.8 357 72-469 12-389 (391)
39 PRK06108 aspartate aminotransf 99.9 1.6E-24 3.5E-29 226.2 32.4 334 93-469 24-381 (382)
40 PRK07366 succinyldiaminopimela 99.9 1.5E-24 3.3E-29 227.1 32.0 335 93-467 30-387 (388)
41 PRK05957 aspartate aminotransf 99.9 3.7E-24 8E-29 224.2 34.9 357 74-469 8-384 (389)
42 TIGR02006 IscS cysteine desulf 99.9 1E-24 2.2E-29 229.5 29.8 341 96-471 5-378 (402)
43 TIGR03540 DapC_direct LL-diami 99.9 6.4E-24 1.4E-28 221.9 35.6 334 93-465 29-381 (383)
44 PRK06207 aspartate aminotransf 99.9 3.5E-24 7.5E-29 225.6 33.4 336 94-470 40-402 (405)
45 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.7E-24 5.9E-29 225.1 32.3 330 94-469 19-380 (387)
46 PRK13479 2-aminoethylphosphona 99.9 6E-24 1.3E-28 220.9 33.7 332 97-470 8-363 (368)
47 KOG0257 Kynurenine aminotransf 99.9 8.3E-25 1.8E-29 218.7 25.8 302 71-403 9-344 (420)
48 PRK06290 aspartate aminotransf 99.9 7.9E-24 1.7E-28 223.0 34.3 350 79-470 24-405 (410)
49 PRK07682 hypothetical protein; 99.9 6.4E-24 1.4E-28 221.5 32.9 336 93-469 20-375 (378)
50 PRK07337 aminotransferase; Val 99.9 4.1E-24 8.9E-29 223.8 31.1 335 93-467 30-386 (388)
51 cd06454 KBL_like KBL_like; thi 99.9 3.4E-24 7.4E-29 220.6 29.9 319 106-467 17-348 (349)
52 COG0399 WecE Predicted pyridox 99.9 2.1E-24 4.6E-29 219.7 27.8 323 102-469 10-372 (374)
53 PRK13355 bifunctional HTH-doma 99.9 8.3E-24 1.8E-28 229.3 34.3 360 71-469 120-513 (517)
54 PRK06348 aspartate aminotransf 99.9 1E-23 2.2E-28 220.6 33.2 357 68-466 4-381 (384)
55 TIGR01814 kynureninase kynuren 99.9 7.7E-24 1.7E-28 223.1 31.6 338 94-468 27-405 (406)
56 TIGR03235 DNA_S_dndA cysteine 99.9 2E-24 4.4E-29 223.2 26.7 299 100-426 5-321 (353)
57 PRK05942 aspartate aminotransf 99.9 1.5E-23 3.3E-28 220.0 33.6 331 94-468 36-387 (394)
58 PRK06939 2-amino-3-ketobutyrat 99.9 1.3E-23 2.8E-28 220.3 32.1 335 94-470 43-393 (397)
59 PRK07179 hypothetical protein; 99.9 1.3E-23 2.9E-28 221.4 32.1 325 101-470 61-398 (407)
60 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.5E-23 3.2E-28 218.2 31.9 330 94-469 7-367 (370)
61 PRK09082 methionine aminotrans 99.9 6.8E-24 1.5E-28 222.0 29.4 358 72-466 10-385 (386)
62 PRK08068 transaminase; Reviewe 99.9 2.3E-23 4.9E-28 218.3 33.3 331 94-465 33-384 (389)
63 PRK09276 LL-diaminopimelate am 99.9 3.9E-23 8.4E-28 216.2 34.9 331 94-465 32-383 (385)
64 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.9E-23 6.2E-28 214.1 33.0 326 98-467 3-354 (355)
65 PRK13520 L-tyrosine decarboxyl 99.9 3.6E-23 7.9E-28 215.0 33.6 346 78-469 4-370 (371)
66 PRK06225 aspartate aminotransf 99.9 3.1E-23 6.6E-28 216.6 32.7 335 93-470 28-376 (380)
67 PRK07309 aromatic amino acid a 99.9 5.8E-23 1.3E-27 215.4 34.8 338 94-469 31-387 (391)
68 TIGR01437 selA_rel uncharacter 99.9 1.8E-23 3.9E-28 216.8 30.4 311 101-467 21-362 (363)
69 PRK07683 aminotransferase A; V 99.9 3.6E-23 7.8E-28 216.6 32.9 336 93-469 28-382 (387)
70 PRK07550 hypothetical protein; 99.9 6.5E-23 1.4E-27 214.6 34.6 334 94-466 30-383 (386)
71 PRK14012 cysteine desulfurase; 99.9 2.4E-23 5.1E-28 219.3 30.3 344 96-471 5-380 (404)
72 COG0075 Serine-pyruvate aminot 99.9 8E-23 1.7E-27 207.9 32.9 340 95-471 6-364 (383)
73 PRK07324 transaminase; Validat 99.9 1.6E-23 3.5E-28 218.1 28.6 327 94-469 27-369 (373)
74 PRK08912 hypothetical protein; 99.9 6.6E-23 1.4E-27 214.6 33.0 359 74-469 8-385 (387)
75 TIGR03537 DapC succinyldiamino 99.9 4E-23 8.7E-28 213.4 31.0 327 96-466 3-349 (350)
76 PLN00145 tyrosine/nicotianamin 99.9 5.9E-23 1.3E-27 217.6 33.0 345 94-471 53-425 (430)
77 PRK14807 histidinol-phosphate 99.9 4.4E-23 9.4E-28 213.2 31.0 318 94-468 23-350 (351)
78 TIGR00858 bioF 8-amino-7-oxono 99.9 3.9E-23 8.4E-28 213.5 30.6 327 94-464 17-359 (360)
79 PRK08636 aspartate aminotransf 99.9 9.8E-23 2.1E-27 214.5 34.0 340 94-470 34-400 (403)
80 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.2E-23 1.6E-27 212.3 32.1 324 97-468 5-360 (361)
81 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.2E-23 6.9E-28 216.3 29.0 323 104-468 11-377 (379)
82 PLN02656 tyrosine transaminase 99.9 3.6E-23 7.9E-28 218.1 29.8 343 93-470 31-403 (409)
83 KOG1549 Cysteine desulfurase N 99.9 1E-23 2.3E-28 213.5 24.4 345 94-471 43-419 (428)
84 PRK08363 alanine aminotransfer 99.9 1.2E-22 2.5E-27 213.6 33.5 334 94-469 31-393 (398)
85 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.7E-23 3.6E-28 215.9 26.4 294 135-465 18-352 (352)
86 PRK05764 aspartate aminotransf 99.9 1E-22 2.2E-27 213.5 32.7 333 94-469 32-390 (393)
87 TIGR03588 PseC UDP-4-keto-6-de 99.9 2.8E-23 6.1E-28 216.9 28.2 321 105-468 8-380 (380)
88 PLN02187 rooty/superroot1 99.9 1.2E-22 2.6E-27 217.0 32.2 344 94-471 67-439 (462)
89 PRK07777 aminotransferase; Val 99.9 1.6E-22 3.5E-27 211.7 32.3 358 74-467 6-383 (387)
90 PLN03026 histidinol-phosphate 99.9 7.2E-23 1.6E-27 213.8 29.4 317 94-467 53-379 (380)
91 cd00613 GDC-P Glycine cleavage 99.9 1.4E-22 2.9E-27 212.8 31.6 294 139-464 64-398 (398)
92 PRK04870 histidinol-phosphate 99.9 4.5E-23 9.8E-28 213.4 27.6 320 94-467 27-355 (356)
93 PRK05958 8-amino-7-oxononanoat 99.9 1.7E-22 3.7E-27 210.8 31.9 330 94-467 40-384 (385)
94 PRK09147 succinyldiaminopimela 99.9 1.3E-22 2.8E-27 213.1 30.7 333 93-468 29-394 (396)
95 PRK06855 aminotransferase; Val 99.9 1.9E-22 4E-27 214.2 32.2 344 94-470 33-429 (433)
96 TIGR01141 hisC histidinol-phos 99.9 4.9E-23 1.1E-27 212.2 26.9 313 94-464 20-345 (346)
97 PRK09148 aminotransferase; Val 99.9 8.9E-22 1.9E-26 207.3 36.1 338 94-471 31-391 (405)
98 PRK01533 histidinol-phosphate 99.9 5.7E-23 1.2E-27 213.4 26.5 311 94-470 30-355 (366)
99 cd06502 TA_like Low-specificit 99.9 5.5E-23 1.2E-27 210.8 25.9 318 100-466 3-337 (338)
100 TIGR03538 DapC_gpp succinyldia 99.9 3.3E-22 7.1E-27 209.8 31.6 331 93-466 28-391 (393)
101 PLN02376 1-aminocyclopropane-1 99.9 1.6E-22 3.5E-27 217.2 29.3 342 94-471 47-439 (496)
102 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.8E-22 1.3E-26 206.2 32.3 316 105-466 32-372 (373)
103 PRK08153 histidinol-phosphate 99.9 3.5E-22 7.7E-27 207.8 30.5 319 95-470 34-365 (369)
104 PLN00143 tyrosine/nicotianamin 99.9 4.6E-22 1E-26 209.7 31.6 343 93-470 32-404 (409)
105 PLN02721 threonine aldolase 99.9 4.7E-22 1E-26 205.1 31.0 324 95-469 7-351 (353)
106 PRK03158 histidinol-phosphate 99.9 2E-22 4.3E-27 208.8 28.1 314 94-467 30-358 (359)
107 PRK15481 transcriptional regul 99.9 2.1E-22 4.5E-27 213.9 28.7 275 162-469 143-430 (431)
108 PLN02450 1-aminocyclopropane-1 99.9 2.8E-22 6E-27 214.5 29.8 344 94-470 39-430 (468)
109 TIGR01264 tyr_amTase_E tyrosin 99.9 7.8E-22 1.7E-26 207.5 32.5 340 93-469 31-398 (401)
110 PRK05387 histidinol-phosphate 99.9 2.6E-22 5.6E-27 207.4 28.1 317 94-469 25-352 (353)
111 PRK08175 aminotransferase; Val 99.9 1.9E-21 4.1E-26 204.2 34.9 335 94-469 30-388 (395)
112 PRK09105 putative aminotransfe 99.9 4E-22 8.8E-27 207.4 29.3 311 94-468 44-368 (370)
113 COG0079 HisC Histidinol-phosph 99.9 7.1E-22 1.5E-26 202.9 30.2 318 94-469 23-353 (356)
114 PRK03317 histidinol-phosphate 99.9 5.2E-22 1.1E-26 206.4 29.7 320 95-469 28-363 (368)
115 PRK02731 histidinol-phosphate 99.9 4.2E-22 9.1E-27 207.0 28.8 319 93-469 32-365 (367)
116 PRK09265 aminotransferase AlaT 99.9 1.8E-21 3.9E-26 205.0 33.9 337 94-469 34-400 (404)
117 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.3E-21 2.7E-26 204.6 32.4 333 94-469 34-380 (385)
118 PTZ00377 alanine aminotransfer 99.9 1.2E-21 2.6E-26 210.8 32.7 328 105-470 89-475 (481)
119 PRK06107 aspartate aminotransf 99.9 1.1E-21 2.3E-26 206.6 31.2 335 94-469 34-399 (402)
120 PTZ00433 tyrosine aminotransfe 99.9 8.4E-22 1.8E-26 208.0 30.4 342 93-470 33-408 (412)
121 TIGR01265 tyr_nico_aTase tyros 99.9 4.6E-21 1E-25 201.8 35.5 342 92-469 30-400 (403)
122 PRK04366 glycine dehydrogenase 99.9 2.5E-21 5.4E-26 207.7 33.8 333 101-471 78-449 (481)
123 PRK00950 histidinol-phosphate 99.9 4.3E-22 9.3E-27 206.4 26.7 314 94-468 35-360 (361)
124 PLN02483 serine palmitoyltrans 99.9 1.2E-21 2.6E-26 210.4 30.3 320 106-470 121-466 (489)
125 PRK05166 histidinol-phosphate 99.9 8.4E-22 1.8E-26 205.1 28.2 318 94-468 37-369 (371)
126 TIGR03576 pyridox_MJ0158 pyrid 99.9 7.4E-22 1.6E-26 203.1 27.3 301 106-468 35-345 (346)
127 PRK02610 histidinol-phosphate 99.9 1.3E-21 2.9E-26 203.9 29.4 321 95-469 30-370 (374)
128 PLN03227 serine palmitoyltrans 99.9 2.4E-21 5.2E-26 202.9 31.4 329 106-471 14-383 (392)
129 PRK08056 threonine-phosphate d 99.9 1.3E-21 2.9E-26 202.5 29.1 317 94-469 21-354 (356)
130 PRK03321 putative aminotransfe 99.9 6.4E-22 1.4E-26 204.5 26.6 313 94-468 23-349 (352)
131 PRK09275 aspartate aminotransf 99.9 7.3E-22 1.6E-26 211.2 27.4 342 94-471 101-518 (527)
132 PF01041 DegT_DnrJ_EryC1: DegT 99.9 4.4E-22 9.6E-27 206.6 25.0 315 107-465 5-363 (363)
133 PLN02231 alanine transaminase 99.9 2.1E-21 4.6E-26 209.9 30.8 340 94-470 130-527 (534)
134 PRK13237 tyrosine phenol-lyase 99.9 4.1E-21 8.9E-26 199.5 31.3 314 129-474 72-437 (460)
135 PLN02724 Molybdenum cofactor s 99.9 3.3E-21 7.2E-26 218.3 33.4 352 94-470 34-488 (805)
136 PRK13392 5-aminolevulinate syn 99.9 2E-21 4.4E-26 205.0 29.4 321 105-469 61-396 (410)
137 PRK07865 N-succinyldiaminopime 99.9 2.8E-21 6.1E-26 200.7 29.0 336 71-465 4-363 (364)
138 PRK07590 L,L-diaminopimelate a 99.9 3.2E-21 7E-26 203.4 29.9 328 94-467 35-408 (409)
139 TIGR01821 5aminolev_synth 5-am 99.9 4.8E-21 1E-25 201.6 30.6 327 99-469 50-395 (402)
140 PRK10534 L-threonine aldolase; 99.9 2.5E-21 5.5E-26 198.5 26.9 319 96-468 2-331 (333)
141 PRK09064 5-aminolevulinate syn 99.9 1.1E-20 2.3E-25 199.3 31.8 327 99-470 51-397 (407)
142 TIGR03801 asp_4_decarbox aspar 99.9 2.9E-21 6.4E-26 206.3 27.7 343 94-471 95-517 (521)
143 PLN02822 serine palmitoyltrans 99.9 9.8E-21 2.1E-25 202.9 31.7 336 94-470 110-477 (481)
144 PRK07568 aspartate aminotransf 99.9 1.5E-20 3.3E-25 197.3 32.0 331 94-470 31-392 (397)
145 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.6E-21 1.2E-25 198.8 28.2 320 104-468 8-375 (376)
146 PLN02607 1-aminocyclopropane-1 99.9 6.6E-21 1.4E-25 202.5 29.1 342 94-471 48-438 (447)
147 cd06450 DOPA_deC_like DOPA dec 99.9 1.5E-21 3.2E-26 200.8 23.5 282 134-466 33-344 (345)
148 PRK02769 histidine decarboxyla 99.9 4.5E-20 9.7E-25 191.7 34.0 316 107-469 36-371 (380)
149 TIGR02618 tyr_phenol_ly tyrosi 99.9 6E-21 1.3E-25 197.7 27.1 316 127-474 63-430 (450)
150 PRK01688 histidinol-phosphate 99.9 1.6E-21 3.5E-26 201.5 23.0 277 145-464 63-350 (351)
151 COG0156 BioF 7-keto-8-aminopel 99.9 9.9E-21 2.1E-25 194.3 28.4 327 96-467 42-387 (388)
152 PLN02672 methionine S-methyltr 99.9 7.7E-21 1.7E-25 215.0 30.2 332 94-469 698-1079(1082)
153 PRK07392 threonine-phosphate d 99.9 1.3E-20 2.8E-25 195.5 29.6 316 94-469 23-358 (360)
154 KOG0259 Tyrosine aminotransfer 99.9 1.1E-20 2.5E-25 186.0 27.4 332 104-470 78-433 (447)
155 PRK14809 histidinol-phosphate 99.9 1.5E-20 3.3E-25 194.7 29.6 313 94-469 31-356 (357)
156 PRK06358 threonine-phosphate d 99.9 1.5E-20 3.3E-25 194.5 29.1 314 95-468 21-353 (354)
157 PRK05839 hypothetical protein; 99.9 1.5E-20 3.3E-25 195.9 29.1 323 94-469 25-373 (374)
158 TIGR01788 Glu-decarb-GAD gluta 99.9 6.4E-20 1.4E-24 193.1 33.6 338 103-469 51-428 (431)
159 PRK00451 glycine dehydrogenase 99.9 2.2E-20 4.7E-25 199.3 30.5 289 144-468 117-446 (447)
160 PRK07908 hypothetical protein; 99.9 2.3E-20 5E-25 192.7 29.5 314 93-469 22-346 (349)
161 PRK06836 aspartate aminotransf 99.9 3.6E-20 7.8E-25 194.5 30.8 336 95-471 35-392 (394)
162 PRK05355 3-phosphoserine/phosp 99.9 9.9E-21 2.1E-25 195.9 25.6 333 95-470 4-358 (360)
163 TIGR03539 DapC_actino succinyl 99.9 1.8E-20 3.9E-25 194.1 27.7 312 94-464 22-356 (357)
164 PRK04635 histidinol-phosphate 99.9 8.1E-21 1.8E-25 196.5 24.5 275 146-466 67-351 (354)
165 PRK13393 5-aminolevulinate syn 99.9 6.8E-20 1.5E-24 193.1 31.7 328 99-470 50-396 (406)
166 PRK03080 phosphoserine aminotr 99.9 1.7E-20 3.6E-25 195.8 26.2 327 95-470 13-373 (378)
167 PLN02414 glycine dehydrogenase 99.9 6E-20 1.3E-24 207.4 31.6 297 143-474 572-911 (993)
168 PRK09257 aromatic amino acid a 99.9 9.5E-21 2.1E-25 198.9 23.6 330 93-467 26-395 (396)
169 cd00609 AAT_like Aspartate ami 99.9 8.1E-20 1.8E-24 187.2 30.0 299 135-465 36-349 (350)
170 TIGR03542 DAPAT_plant LL-diami 99.9 1E-19 2.2E-24 191.5 31.5 332 94-467 34-401 (402)
171 PRK04781 histidinol-phosphate 99.9 4.2E-20 9E-25 191.9 27.4 284 145-468 65-361 (364)
172 PF00155 Aminotran_1_2: Aminot 99.9 1.5E-20 3.2E-25 194.9 23.9 330 95-464 3-363 (363)
173 COG1167 ARO8 Transcriptional r 99.9 1.1E-19 2.3E-24 193.8 29.6 300 137-471 134-456 (459)
174 PLN02397 aspartate transaminas 99.9 5.8E-20 1.3E-24 194.4 27.1 267 163-470 122-421 (423)
175 PRK06425 histidinol-phosphate 99.9 5.6E-20 1.2E-24 188.6 25.9 300 94-468 17-331 (332)
176 cd00615 Orn_deC_like Ornithine 99.9 5.5E-21 1.2E-25 192.7 17.1 219 144-382 64-293 (294)
177 PRK05968 hypothetical protein; 99.9 2.5E-20 5.5E-25 194.9 22.7 289 134-470 62-386 (389)
178 PRK15407 lipopolysaccharide bi 99.9 1.8E-19 3.9E-24 190.8 28.8 300 136-469 64-435 (438)
179 TIGR01328 met_gam_lyase methio 99.9 4.9E-20 1.1E-24 192.7 24.0 289 133-469 57-389 (391)
180 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.1E-19 4.6E-24 187.3 28.3 319 106-468 10-374 (375)
181 PRK06767 methionine gamma-lyas 99.9 4.9E-20 1.1E-24 192.6 23.2 291 133-469 59-384 (386)
182 PTZ00376 aspartate aminotransf 99.9 4E-20 8.8E-25 194.7 22.0 286 138-469 75-402 (404)
183 PRK14808 histidinol-phosphate 99.9 3E-19 6.5E-24 183.4 27.4 303 93-466 19-333 (335)
184 PRK05937 8-amino-7-oxononanoat 99.9 5E-19 1.1E-23 184.2 29.1 313 106-471 20-351 (370)
185 PRK07811 cystathionine gamma-s 99.9 1.7E-19 3.7E-24 188.6 25.7 285 135-469 61-387 (388)
186 PLN02955 8-amino-7-oxononanoat 99.9 5E-19 1.1E-23 185.8 29.0 325 98-470 106-461 (476)
187 KOG2862 Alanine-glyoxylate ami 99.9 1.2E-18 2.5E-23 167.7 28.9 332 96-470 19-382 (385)
188 PLN03032 serine decarboxylase; 99.8 7.3E-19 1.6E-23 181.5 29.0 266 105-391 35-321 (374)
189 TIGR01364 serC_1 phosphoserine 99.8 5.1E-19 1.1E-23 182.2 27.8 324 104-469 2-347 (349)
190 cd00611 PSAT_like Phosphoserin 99.8 3.3E-19 7.1E-24 184.5 26.4 328 96-467 1-353 (355)
191 PRK08861 cystathionine gamma-s 99.8 1.6E-19 3.4E-24 188.1 23.9 290 133-471 51-384 (388)
192 PRK07504 O-succinylhomoserine 99.8 1.3E-19 2.8E-24 190.1 23.3 215 134-386 64-285 (398)
193 PRK04311 selenocysteine syntha 99.8 8.5E-19 1.8E-23 185.8 29.7 319 101-469 94-463 (464)
194 TIGR01366 serC_3 phosphoserine 99.8 3.4E-19 7.5E-24 184.6 26.2 327 96-469 5-359 (361)
195 PRK03967 histidinol-phosphate 99.8 4.6E-19 9.9E-24 182.2 26.8 306 94-469 19-333 (337)
196 PRK06234 methionine gamma-lyas 99.8 1.7E-19 3.7E-24 189.3 23.8 291 134-470 63-397 (400)
197 PRK09440 avtA valine--pyruvate 99.8 8.5E-19 1.8E-23 185.3 28.9 340 94-470 31-411 (416)
198 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 1.8E-20 3.9E-25 193.6 15.6 265 144-426 71-400 (417)
199 PRK08045 cystathionine gamma-s 99.8 2.9E-19 6.3E-24 186.5 24.5 289 133-471 50-383 (386)
200 PRK08133 O-succinylhomoserine 99.8 2.9E-19 6.2E-24 187.0 24.5 242 103-387 33-281 (390)
201 TIGR01329 cysta_beta_ly_E cyst 99.8 5E-19 1.1E-23 184.4 26.2 288 133-470 45-375 (378)
202 PLN02242 methionine gamma-lyas 99.8 3.9E-19 8.5E-24 187.2 25.2 224 133-392 74-305 (418)
203 PRK07810 O-succinylhomoserine 99.8 4.6E-19 1E-23 186.0 24.0 217 133-387 68-291 (403)
204 PRK07503 methionine gamma-lyas 99.8 8.4E-19 1.8E-23 184.2 26.0 217 134-387 64-287 (403)
205 PRK08776 cystathionine gamma-s 99.8 7.8E-19 1.7E-23 184.3 25.7 213 133-384 58-277 (405)
206 PLN02368 alanine transaminase 99.8 6.7E-19 1.5E-23 184.9 24.1 243 137-403 109-396 (407)
207 TIGR01324 cysta_beta_ly_B cyst 99.8 6.5E-19 1.4E-23 183.1 23.6 290 133-469 48-375 (377)
208 PRK15029 arginine decarboxylas 99.8 8.5E-19 1.8E-23 193.3 25.6 296 144-469 210-603 (755)
209 PRK07269 cystathionine gamma-s 99.8 9.2E-19 2E-23 181.3 23.1 228 133-402 52-287 (364)
210 PRK08064 cystathionine beta-ly 99.8 2.2E-18 4.9E-23 180.3 26.2 246 133-421 52-320 (390)
211 PRK08247 cystathionine gamma-s 99.8 1.6E-18 3.4E-23 180.1 24.8 284 133-469 50-363 (366)
212 cd00614 CGS_like CGS_like: Cys 99.8 2.4E-18 5.2E-23 179.0 26.3 249 133-422 38-309 (369)
213 COG2008 GLY1 Threonine aldolas 99.8 1.2E-18 2.6E-23 172.8 22.4 317 100-468 5-341 (342)
214 PRK08574 cystathionine gamma-s 99.8 1E-18 2.2E-23 182.4 23.2 213 133-384 51-269 (385)
215 PRK05367 glycine dehydrogenase 99.8 5.1E-18 1.1E-22 192.7 30.1 301 139-474 542-879 (954)
216 TIGR00474 selA seryl-tRNA(sec) 99.8 9.4E-18 2E-22 177.4 30.0 316 101-464 89-453 (454)
217 PRK12566 glycine dehydrogenase 99.8 4.2E-18 9E-23 189.2 28.3 304 136-475 541-881 (954)
218 PRK07050 cystathionine beta-ly 99.8 2E-18 4.4E-23 180.7 24.6 291 133-470 63-391 (394)
219 TIGR01325 O_suc_HS_sulf O-succ 99.8 2E-18 4.3E-23 180.2 24.1 212 134-384 53-270 (380)
220 TIGR01140 L_thr_O3P_dcar L-thr 99.8 4.1E-18 8.9E-23 174.6 26.0 287 94-445 18-317 (330)
221 PRK08249 cystathionine gamma-s 99.8 2.3E-18 5.1E-23 180.4 24.4 288 133-470 62-393 (398)
222 PRK05664 threonine-phosphate d 99.8 2.5E-18 5.5E-23 176.2 23.8 262 146-469 56-327 (330)
223 PRK08114 cystathionine beta-ly 99.8 4.4E-18 9.6E-23 176.8 25.5 289 133-469 60-392 (395)
224 TIGR00461 gcvP glycine dehydro 99.8 1.9E-17 4.1E-22 185.2 31.8 301 139-474 530-871 (939)
225 TIGR02080 O_succ_thio_ly O-suc 99.8 5.2E-18 1.1E-22 176.9 25.7 287 133-469 49-380 (382)
226 PRK06959 putative threonine-ph 99.8 8.1E-18 1.8E-22 173.0 25.8 263 145-470 59-333 (339)
227 PRK08354 putative aminotransfe 99.8 1.6E-17 3.6E-22 168.7 27.7 291 94-467 9-309 (311)
228 PRK08637 hypothetical protein; 99.8 1.3E-17 2.7E-22 174.8 27.4 276 162-469 71-385 (388)
229 PRK05613 O-acetylhomoserine am 99.8 8.8E-18 1.9E-22 177.4 26.0 161 133-319 67-233 (437)
230 PRK09028 cystathionine beta-ly 99.8 1.1E-17 2.4E-22 174.3 25.8 288 134-470 60-387 (394)
231 PLN02509 cystathionine beta-ly 99.8 7.2E-18 1.6E-22 178.7 24.3 215 133-386 131-352 (464)
232 PRK06460 hypothetical protein; 99.8 2E-17 4.3E-22 172.4 27.0 212 134-384 44-261 (376)
233 PRK05939 hypothetical protein; 99.8 2.5E-17 5.4E-22 172.5 27.4 157 133-317 45-206 (397)
234 PRK06176 cystathionine gamma-s 99.8 3.1E-17 6.7E-22 171.0 27.3 286 133-469 48-377 (380)
235 PRK07671 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 174.0 24.0 215 133-386 48-269 (377)
236 PRK06702 O-acetylhomoserine am 99.8 1.4E-17 3.1E-22 175.0 24.2 159 133-317 59-223 (432)
237 PRK06434 cystathionine gamma-l 99.8 1.5E-17 3.3E-22 172.8 23.9 284 133-469 62-383 (384)
238 PRK00854 rocD ornithine--oxo-a 99.8 1E-16 2.2E-21 168.6 30.3 313 105-469 58-400 (401)
239 TIGR03531 selenium_SpcS O-phos 99.8 5.5E-17 1.2E-21 170.4 27.4 309 137-467 103-443 (444)
240 PRK08134 O-acetylhomoserine am 99.8 3.8E-17 8.2E-22 172.7 26.0 157 133-316 62-224 (433)
241 PRK13578 ornithine decarboxyla 99.8 1.4E-17 3E-22 182.1 23.2 296 143-468 178-563 (720)
242 PRK05967 cystathionine beta-ly 99.8 3.8E-17 8.3E-22 170.0 25.4 292 132-470 61-391 (395)
243 PRK05994 O-acetylhomoserine am 99.8 6.9E-17 1.5E-21 170.8 26.1 156 135-317 63-224 (427)
244 TIGR03799 NOD_PanD_pyr putativ 99.8 7.8E-17 1.7E-21 173.2 26.9 307 134-462 124-517 (522)
245 PRK07582 cystathionine gamma-l 99.8 6.7E-17 1.4E-21 167.8 25.6 281 134-469 50-364 (366)
246 PLN02880 tyrosine decarboxylas 99.8 1E-16 2.2E-21 171.9 27.3 313 135-470 118-484 (490)
247 TIGR00707 argD acetylornithine 99.8 2.3E-16 5E-21 164.5 29.1 321 95-467 29-378 (379)
248 PLN02452 phosphoserine transam 99.8 3E-16 6.5E-21 162.0 29.3 334 94-469 7-362 (365)
249 PRK07812 O-acetylhomoserine am 99.8 6.1E-17 1.3E-21 171.0 24.6 160 133-318 67-232 (436)
250 PRK08248 O-acetylhomoserine am 99.8 8.9E-17 1.9E-21 169.9 25.6 160 133-319 62-227 (431)
251 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.9E-17 6.2E-22 170.4 21.0 288 133-469 53-386 (386)
252 PRK06084 O-acetylhomoserine am 99.8 7.1E-17 1.5E-21 170.4 24.2 160 133-319 56-221 (425)
253 PRK15400 lysine decarboxylase 99.8 4.1E-17 8.8E-22 178.3 22.9 291 143-468 199-557 (714)
254 PRK07049 methionine gamma-lyas 99.8 1E-16 2.2E-21 169.4 24.4 217 134-387 82-315 (427)
255 PRK07505 hypothetical protein; 99.8 1.2E-15 2.6E-20 160.6 32.4 331 95-470 48-399 (402)
256 PRK15399 lysine decarboxylase 99.8 1.5E-16 3.3E-21 173.8 26.2 291 143-469 199-558 (713)
257 COG0626 MetC Cystathionine bet 99.8 2.1E-16 4.6E-21 162.3 24.4 288 133-470 61-394 (396)
258 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 1.5E-16 3.3E-21 168.0 23.9 159 134-319 56-219 (418)
259 TIGR02617 tnaA_trp_ase tryptop 99.7 6.9E-16 1.5E-20 158.8 26.3 334 104-474 54-445 (467)
260 PRK01278 argD acetylornithine 99.7 2.6E-15 5.6E-20 157.4 31.3 313 104-469 47-387 (389)
261 PRK04073 rocD ornithine--oxo-a 99.7 1.7E-15 3.7E-20 159.2 28.8 308 104-468 56-395 (396)
262 KOG1368 Threonine aldolase [Am 99.7 3.9E-16 8.4E-21 149.6 21.3 311 105-468 34-366 (384)
263 KOG1360 5-aminolevulinate synt 99.7 1.6E-15 3.5E-20 150.3 25.0 334 96-471 173-525 (570)
264 PRK03244 argD acetylornithine 99.7 5.9E-15 1.3E-19 155.2 31.2 317 105-470 60-394 (398)
265 cd00610 OAT_like Acetyl ornith 99.7 4.3E-15 9.2E-20 156.7 29.1 325 105-467 53-412 (413)
266 PLN02590 probable tyrosine dec 99.7 3.6E-15 7.7E-20 160.4 27.8 313 134-469 165-531 (539)
267 COG1103 Archaea-specific pyrid 99.7 3.5E-15 7.5E-20 141.3 24.2 323 94-470 16-380 (382)
268 COG3844 Kynureninase [Amino ac 99.7 4.9E-15 1.1E-19 143.9 25.6 340 94-470 31-402 (407)
269 PLN02263 serine decarboxylase 99.7 2E-15 4.2E-20 158.6 24.7 289 137-469 131-442 (470)
270 PRK02936 argD acetylornithine 99.7 6.2E-15 1.3E-19 153.9 27.4 314 104-468 45-377 (377)
271 KOG0256 1-aminocyclopropane-1- 99.7 3.2E-15 7E-20 149.1 23.3 281 162-469 148-460 (471)
272 PRK02627 acetylornithine amino 99.7 1.3E-14 2.8E-19 152.4 29.1 310 106-469 57-393 (396)
273 COG1003 GcvP Glycine cleavage 99.7 7.5E-15 1.6E-19 147.7 25.6 298 145-473 115-450 (496)
274 COG0076 GadB Glutamate decarbo 99.7 6.4E-15 1.4E-19 155.8 26.5 298 101-425 70-402 (460)
275 COG2873 MET17 O-acetylhomoseri 99.7 2.4E-15 5.3E-20 148.6 20.9 166 124-318 53-224 (426)
276 KOG1359 Glycine C-acetyltransf 99.7 2.5E-15 5.5E-20 143.6 19.9 322 99-470 72-412 (417)
277 TIGR01365 serC_2 phosphoserine 99.7 2.1E-14 4.5E-19 148.5 27.4 297 133-469 34-372 (374)
278 PTZ00125 ornithine aminotransf 99.7 6.2E-14 1.3E-18 147.4 31.3 317 105-470 48-395 (400)
279 cd01494 AAT_I Aspartate aminot 99.7 1.3E-15 2.8E-20 139.3 15.7 163 144-318 5-170 (170)
280 TIGR01885 Orn_aminotrans ornit 99.7 8.9E-14 1.9E-18 146.4 30.8 310 105-468 54-400 (401)
281 PRK05093 argD bifunctional N-s 99.7 7E-14 1.5E-18 147.3 29.5 308 104-469 56-399 (403)
282 KOG0633 Histidinol phosphate a 99.7 9.9E-15 2.1E-19 137.5 19.9 279 152-466 82-373 (375)
283 TIGR03246 arg_catab_astC succi 99.7 8.6E-14 1.9E-18 146.3 29.3 310 105-470 52-395 (397)
284 COG1982 LdcC Arginine/lysine/o 99.6 1.6E-14 3.5E-19 152.3 22.2 292 144-465 75-403 (557)
285 PLN02414 glycine dehydrogenase 99.6 1.1E-13 2.4E-18 157.1 29.7 308 104-466 116-465 (993)
286 PRK12462 phosphoserine aminotr 99.6 3.5E-13 7.7E-18 138.1 27.0 336 93-469 3-361 (364)
287 PRK12381 bifunctional succinyl 99.6 2.6E-13 5.7E-18 143.0 26.9 315 105-470 56-399 (406)
288 PF06838 Met_gamma_lyase: Meth 99.6 2.3E-13 4.9E-18 135.2 23.8 247 135-417 54-328 (403)
289 PF00282 Pyridoxal_deC: Pyrido 99.6 3.6E-13 7.8E-18 139.9 25.7 244 133-391 73-362 (373)
290 PF01212 Beta_elim_lyase: Beta 99.6 1.1E-15 2.4E-20 152.8 6.6 253 100-391 3-277 (290)
291 TIGR00713 hemL glutamate-1-sem 99.6 1.7E-12 3.7E-17 137.6 31.0 324 94-469 49-421 (423)
292 PRK04260 acetylornithine amino 99.6 1.2E-12 2.7E-17 136.5 29.3 307 106-467 46-374 (375)
293 PRK05367 glycine dehydrogenase 99.6 8.5E-13 1.8E-17 150.5 28.7 273 144-465 126-437 (954)
294 KOG0053 Cystathionine beta-lya 99.6 5.4E-14 1.2E-18 142.9 16.5 214 133-384 75-294 (409)
295 COG1448 TyrB Aspartate/tyrosin 99.6 4.3E-13 9.3E-18 133.8 22.3 324 94-467 27-395 (396)
296 PLN02624 ornithine-delta-amino 99.5 1E-11 2.2E-16 133.3 30.7 317 105-470 92-444 (474)
297 COG4992 ArgD Ornithine/acetylo 99.5 1E-11 2.2E-16 126.0 28.0 330 94-471 43-399 (404)
298 PLN00144 acetylornithine trans 99.5 3.5E-11 7.6E-16 125.8 32.0 316 104-469 31-379 (382)
299 KOG1357 Serine palmitoyltransf 99.5 1.5E-12 3.2E-17 131.6 19.6 322 101-467 152-499 (519)
300 PRK03715 argD acetylornithine 99.5 3.1E-11 6.6E-16 126.7 29.1 313 105-470 53-393 (395)
301 KOG0634 Aromatic amino acid am 99.4 2.9E-11 6.3E-16 122.0 24.6 285 156-471 122-467 (472)
302 PRK08088 4-aminobutyrate amino 99.4 1.8E-10 3.9E-15 122.3 31.2 330 105-470 58-423 (425)
303 PRK08117 4-aminobutyrate amino 99.4 9.3E-11 2E-15 124.7 29.0 329 104-470 59-429 (433)
304 PRK04612 argD acetylornithine 99.4 2.3E-10 5E-15 120.5 29.9 322 104-470 56-403 (408)
305 COG3977 Alanine-alpha-ketoisov 99.4 1.2E-10 2.5E-15 112.4 24.6 341 95-469 32-410 (417)
306 COG1921 SelA Selenocysteine sy 99.4 2E-11 4.4E-16 123.8 20.0 228 101-362 35-273 (395)
307 PRK00062 glutamate-1-semialdeh 99.4 1.9E-10 4.2E-15 122.0 28.2 325 94-469 51-423 (426)
308 PRK05964 adenosylmethionine--8 99.4 1.7E-10 3.7E-15 122.3 27.5 325 105-469 59-421 (423)
309 PRK04013 argD acetylornithine/ 99.4 4E-10 8.7E-15 116.7 29.2 302 104-470 40-360 (364)
310 TIGR03811 tyr_de_CO2_Ent tyros 99.4 1.7E-10 3.7E-15 125.6 26.9 280 104-408 94-507 (608)
311 PRK09792 4-aminobutyrate trans 99.4 1.1E-09 2.4E-14 116.0 32.2 328 104-469 56-420 (421)
312 COG0001 HemL Glutamate-1-semia 99.4 1E-09 2.2E-14 112.8 29.7 316 106-470 71-428 (432)
313 PLN02760 4-aminobutyrate:pyruv 99.4 2.1E-09 4.5E-14 115.9 33.1 324 104-471 105-492 (504)
314 PRK07495 4-aminobutyrate amino 99.4 5.5E-09 1.2E-13 110.7 35.8 329 104-470 56-421 (425)
315 COG3033 TnaA Tryptophanase [Am 99.3 2.2E-10 4.7E-15 113.1 22.6 308 146-474 86-448 (471)
316 PRK11522 putrescine--2-oxoglut 99.3 1E-09 2.2E-14 117.2 29.9 323 104-471 98-452 (459)
317 TIGR03372 putres_am_tran putre 99.3 1.9E-09 4.2E-14 114.4 30.7 320 104-468 91-442 (442)
318 PRK08360 4-aminobutyrate amino 99.3 6.4E-09 1.4E-13 110.8 34.2 330 104-471 57-427 (443)
319 COG0160 GabT 4-aminobutyrate a 99.3 4.5E-09 9.8E-14 109.8 31.5 328 105-470 73-445 (447)
320 PRK06777 4-aminobutyrate amino 99.3 4.8E-09 1E-13 111.1 32.4 321 104-469 56-420 (421)
321 TIGR00461 gcvP glycine dehydro 99.3 1E-09 2.2E-14 123.7 28.2 274 144-465 114-426 (939)
322 PRK06058 4-aminobutyrate amino 99.3 2.7E-09 5.9E-14 113.7 30.4 327 104-469 72-441 (443)
323 KOG1383 Glutamate decarboxylas 99.3 2.5E-10 5.3E-15 116.4 20.7 269 137-426 118-413 (491)
324 PRK12403 putative aminotransfe 99.3 3.5E-09 7.7E-14 113.3 30.8 323 104-471 70-453 (460)
325 TIGR00700 GABAtrnsam 4-aminobu 99.3 2.8E-09 6E-14 113.0 29.7 322 104-469 49-419 (420)
326 PRK00615 glutamate-1-semialdeh 99.3 9.2E-09 2E-13 109.1 33.1 320 104-471 69-429 (433)
327 TIGR02407 ectoine_ectB diamino 99.3 6E-09 1.3E-13 110.1 31.0 323 104-469 51-411 (412)
328 PRK08593 4-aminobutyrate amino 99.3 3.1E-09 6.8E-14 113.2 28.4 323 105-471 59-430 (445)
329 PF03841 SelA: L-seryl-tRNA se 99.3 7.4E-12 1.6E-16 126.0 7.7 245 101-383 14-295 (367)
330 PRK09264 diaminobutyrate--2-ox 99.3 9.1E-09 2E-13 109.2 31.4 331 104-471 55-417 (425)
331 KOG2040 Glycine dehydrogenase 99.3 1.1E-09 2.5E-14 114.8 23.5 292 146-472 589-920 (1001)
332 PRK13360 omega amino acid--pyr 99.3 7.7E-09 1.7E-13 110.1 30.6 322 104-470 62-440 (442)
333 PRK07986 adenosylmethionine--8 99.3 3.6E-09 7.8E-14 112.1 27.9 320 104-470 59-423 (428)
334 PRK07046 aminotransferase; Val 99.3 8.7E-09 1.9E-13 109.9 30.4 325 94-470 76-450 (453)
335 PRK06918 4-aminobutyrate amino 99.3 7.1E-09 1.5E-13 110.9 29.9 325 104-471 70-444 (451)
336 PRK06173 adenosylmethionine--8 99.2 6.7E-09 1.4E-13 110.1 29.1 320 104-470 60-425 (429)
337 PRK06105 aminotransferase; Pro 99.2 1.1E-08 2.3E-13 109.6 30.9 323 104-470 64-449 (460)
338 PRK09221 beta alanine--pyruvat 99.2 1.1E-08 2.3E-13 109.2 30.1 320 104-469 65-442 (445)
339 PRK05769 4-aminobutyrate amino 99.2 1.8E-08 3.9E-13 107.3 31.8 200 242-470 221-439 (441)
340 PRK06541 hypothetical protein; 99.2 1.3E-08 2.8E-13 108.8 30.8 215 232-470 208-455 (460)
341 TIGR00508 bioA adenosylmethion 99.2 5.4E-09 1.2E-13 110.9 27.4 320 104-469 61-425 (427)
342 PF02347 GDC-P: Glycine cleava 99.2 2.3E-09 4.9E-14 111.5 23.6 278 144-464 115-429 (429)
343 KOG0258 Alanine aminotransfera 99.2 4.3E-09 9.4E-14 105.0 23.6 306 105-443 87-451 (475)
344 PLN02482 glutamate-1-semialdeh 99.2 5E-08 1.1E-12 104.5 32.7 314 105-469 116-472 (474)
345 PF12897 Aminotran_MocR: Alani 99.2 1.4E-08 3E-13 102.2 26.1 342 93-471 22-416 (425)
346 PRK06062 hypothetical protein; 99.2 5.9E-08 1.3E-12 103.7 32.4 320 104-470 69-445 (451)
347 TIGR00709 dat 2,4-diaminobutyr 99.2 1.6E-07 3.5E-12 100.1 34.1 204 242-470 206-435 (442)
348 PRK07678 aminotransferase; Val 99.1 9.2E-08 2E-12 102.2 31.7 326 104-470 63-449 (451)
349 PRK12389 glutamate-1-semialdeh 99.1 1.4E-07 3E-12 100.3 31.8 306 105-469 70-426 (428)
350 PRK06082 4-aminobutyrate amino 99.1 1.7E-07 3.7E-12 100.3 32.3 322 104-471 87-452 (459)
351 COG4100 Cystathionine beta-lya 99.1 8.2E-09 1.8E-13 99.8 19.5 225 137-390 67-313 (416)
352 PRK05630 adenosylmethionine--8 99.1 8.3E-08 1.8E-12 101.6 29.1 209 232-470 191-420 (422)
353 PRK06209 glutamate-1-semialdeh 99.1 8.6E-08 1.9E-12 101.9 28.9 309 105-471 65-406 (431)
354 PRK05965 hypothetical protein; 99.1 2.1E-07 4.7E-12 99.6 31.6 327 105-470 63-447 (459)
355 COG0403 GcvP Glycine cleavage 99.1 1.4E-07 2.9E-12 96.0 27.8 285 144-467 125-447 (450)
356 PRK05639 4-aminobutyrate amino 99.1 1E-07 2.3E-12 101.8 28.5 329 104-471 69-444 (457)
357 PRK07481 hypothetical protein; 99.1 1.9E-07 4.2E-12 99.7 30.1 184 259-470 236-445 (449)
358 PRK06916 adenosylmethionine--8 99.0 2.9E-07 6.3E-12 98.6 29.9 321 104-470 72-455 (460)
359 PRK06943 adenosylmethionine--8 99.0 7.7E-07 1.7E-11 95.1 33.1 321 104-470 70-446 (453)
360 PRK06149 hypothetical protein; 99.0 5.2E-07 1.1E-11 105.0 34.1 327 105-470 600-970 (972)
361 PRK07482 hypothetical protein; 99.0 1.1E-06 2.4E-11 94.1 33.1 215 230-470 205-454 (461)
362 PRK07480 putative aminotransfe 99.0 9.5E-07 2.1E-11 94.5 32.3 212 232-471 206-449 (456)
363 PRK07483 hypothetical protein; 99.0 3.6E-07 7.8E-12 97.4 28.8 219 232-470 186-437 (443)
364 KOG1358 Serine palmitoyltransf 99.0 5.4E-08 1.2E-12 97.4 20.4 330 100-469 100-464 (467)
365 PRK06148 hypothetical protein; 99.0 6.4E-07 1.4E-11 104.4 32.1 322 105-470 639-1010(1013)
366 COG1932 SerC Phosphoserine ami 99.0 8.5E-08 1.9E-12 95.9 21.2 333 95-469 6-362 (365)
367 PRK06938 diaminobutyrate--2-ox 98.9 1.2E-06 2.6E-11 93.9 30.1 331 104-470 79-460 (464)
368 PRK06931 diaminobutyrate--2-ox 98.9 5.6E-06 1.2E-10 88.7 35.0 187 259-471 248-455 (459)
369 PRK07030 adenosylmethionine--8 98.9 2.1E-06 4.5E-11 92.1 31.6 213 231-471 201-447 (466)
370 PRK08742 adenosylmethionine--8 98.9 1.9E-06 4.2E-11 92.4 31.0 213 231-471 223-468 (472)
371 PRK06917 hypothetical protein; 98.9 2E-06 4.2E-11 91.9 31.0 330 104-471 47-438 (447)
372 TIGR00699 GABAtrns_euk 4-amino 98.9 7E-07 1.5E-11 95.3 26.4 209 230-468 237-464 (464)
373 KOG1411 Aspartate aminotransfe 98.9 2.9E-08 6.3E-13 97.8 14.5 353 72-469 29-424 (427)
374 PRK07036 hypothetical protein; 98.9 2.3E-06 4.9E-11 91.8 29.9 212 232-471 207-453 (466)
375 KOG1402 Ornithine aminotransfe 98.8 1.5E-06 3.2E-11 85.5 24.0 318 105-468 76-425 (427)
376 TIGR03251 LAT_fam L-lysine 6-t 98.8 1.8E-06 3.8E-11 91.9 27.0 209 231-466 205-430 (431)
377 PF05889 SLA_LP_auto_ag: Solub 98.8 1.1E-07 2.3E-12 96.9 15.9 314 133-469 50-389 (389)
378 KOG0629 Glutamate decarboxylas 98.8 3.9E-07 8.5E-12 92.2 19.3 238 137-390 139-420 (510)
379 PRK12566 glycine dehydrogenase 98.7 5.6E-06 1.2E-10 93.5 28.1 207 233-465 200-439 (954)
380 KOG0628 Aromatic-L-amino-acid/ 98.7 3.1E-06 6.7E-11 86.8 23.3 314 133-470 107-471 (511)
381 PRK08297 L-lysine aminotransfe 98.7 9.6E-06 2.1E-10 86.5 28.3 211 231-469 212-440 (443)
382 COG0161 BioA Adenosylmethionin 98.7 1.9E-05 4.1E-10 82.6 28.9 211 231-471 200-444 (449)
383 KOG1404 Alanine-glyoxylate ami 98.7 2.3E-06 5E-11 86.0 21.1 182 258-464 234-432 (442)
384 KOG3846 L-kynurenine hydrolase 98.7 2.5E-06 5.5E-11 83.0 19.0 348 94-470 67-461 (465)
385 KOG1412 Aspartate aminotransfe 98.6 1.8E-06 3.9E-11 84.2 17.6 277 161-471 101-406 (410)
386 PLN02974 adenosylmethionine-8- 98.6 3.6E-05 7.8E-10 87.2 29.2 186 259-468 608-816 (817)
387 KOG1401 Acetylornithine aminot 98.4 0.00017 3.6E-09 73.4 23.5 198 164-383 121-347 (433)
388 PF00202 Aminotran_3: Aminotra 98.3 7.5E-05 1.6E-09 76.9 19.6 254 104-383 32-315 (339)
389 KOG1403 Predicted alanine-glyo 98.3 0.00043 9.3E-09 67.6 23.1 340 94-470 51-437 (452)
390 PF04864 Alliinase_C: Allinase 98.2 1.5E-05 3.2E-10 79.6 13.0 283 137-467 45-362 (363)
391 KOG1405 4-aminobutyrate aminot 97.7 0.0012 2.7E-08 65.9 15.5 207 231-469 255-482 (484)
392 PLN02994 1-aminocyclopropane-1 97.5 0.00025 5.5E-09 64.2 7.4 54 138-195 95-153 (153)
393 KOG2790 Phosphoserine aminotra 97.3 0.0094 2E-07 58.1 14.7 329 94-469 7-367 (370)
394 KOG2040 Glycine dehydrogenase 97.1 0.08 1.7E-06 57.2 20.2 201 243-465 248-478 (1001)
395 KOG3843 Predicted serine hydro 95.8 0.24 5.1E-06 48.1 13.2 112 227-346 139-262 (432)
396 PF04131 NanE: Putative N-acet 72.8 10 0.00022 35.4 6.2 72 228-305 51-122 (192)
397 COG3010 NanE Putative N-acetyl 68.9 11 0.00024 35.5 5.5 71 229-305 86-157 (229)
398 PRK12595 bifunctional 3-deoxy- 61.7 19 0.00041 37.4 6.3 58 225-282 231-299 (360)
399 PRK13397 3-deoxy-7-phosphohept 61.1 20 0.00044 35.1 6.0 58 226-283 129-197 (250)
400 KOG0630 Predicted pyridoxal-de 57.8 1.4E+02 0.0029 32.2 11.5 91 227-319 272-375 (838)
401 TIGR01361 DAHP_synth_Bsub phos 57.1 25 0.00055 34.7 6.0 57 226-282 139-206 (260)
402 COG1504 Uncharacterized conser 55.3 24 0.00052 29.8 4.5 49 227-276 47-95 (121)
403 PRK13396 3-deoxy-7-phosphohept 54.5 26 0.00057 36.2 5.8 58 226-283 215-284 (352)
404 cd02067 B12-binding B12 bindin 53.0 36 0.00079 28.8 5.7 42 229-270 37-78 (119)
405 cd05126 Mth938 Mth938 domain. 51.7 46 0.00099 28.6 6.0 50 228-278 45-94 (117)
406 PRK02261 methylaspartate mutas 50.8 43 0.00094 29.6 5.9 52 213-269 30-81 (137)
407 cd02072 Glm_B12_BD B12 binding 48.4 39 0.00085 29.5 5.1 54 213-271 26-79 (128)
408 TIGR01440 conserved hypothetic 44.4 22 0.00048 32.3 3.0 50 131-189 65-117 (172)
409 TIGR01501 MthylAspMutase methy 44.4 46 0.001 29.3 5.0 54 213-271 28-81 (134)
410 COG1105 FruK Fructose-1-phosph 43.3 58 0.0013 33.0 6.1 53 226-278 108-167 (310)
411 PF02310 B12-binding: B12 bind 42.9 41 0.00089 28.3 4.5 52 229-280 38-91 (121)
412 TIGR02370 pyl_corrinoid methyl 42.1 59 0.0013 30.6 5.8 60 213-277 111-174 (197)
413 cd02071 MM_CoA_mut_B12_BD meth 40.6 63 0.0014 27.6 5.3 51 214-269 27-77 (122)
414 COG2870 RfaE ADP-heptose synth 39.9 81 0.0018 33.1 6.6 69 208-276 107-177 (467)
415 cd02070 corrinoid_protein_B12- 38.7 68 0.0015 30.2 5.6 60 213-277 109-172 (201)
416 PRK13690 hypothetical protein; 38.4 30 0.00065 31.8 2.9 45 131-181 72-119 (184)
417 TIGR03275 methan_mark_8 putati 36.0 10 0.00022 36.7 -0.5 82 222-308 142-224 (259)
418 PLN02672 methionine S-methyltr 35.7 4.5E+02 0.0098 31.6 12.7 53 232-284 517-571 (1082)
419 cd02069 methionine_synthase_B1 35.4 77 0.0017 30.2 5.5 59 213-276 115-175 (213)
420 TIGR02026 BchE magnesium-proto 35.3 74 0.0016 34.6 6.0 54 227-281 48-103 (497)
421 PRK13398 3-deoxy-7-phosphohept 34.4 58 0.0012 32.3 4.5 57 226-282 141-208 (266)
422 PRK00945 acetyl-CoA decarbonyl 34.2 1.9E+02 0.0041 26.6 7.5 65 227-291 20-84 (171)
423 KOG4759 Ribosome recycling fac 32.9 3.9E+02 0.0085 26.3 9.7 87 409-515 155-245 (263)
424 COG3414 SgaB Phosphotransferas 32.7 76 0.0016 26.1 4.2 69 244-319 3-75 (93)
425 TIGR03586 PseI pseudaminic aci 32.6 1.1E+02 0.0024 31.3 6.3 56 226-283 141-205 (327)
426 cd05560 Xcc1710_like Xcc1710_l 31.7 1.5E+02 0.0032 25.0 6.0 50 227-278 38-87 (109)
427 smart00642 Aamy Alpha-amylase 31.5 36 0.00077 31.1 2.3 27 252-278 65-91 (166)
428 cd00984 DnaB_C DnaB helicase C 31.3 1.4E+02 0.003 28.6 6.6 48 228-275 105-168 (242)
429 COG1163 DRG Predicted GTPase [ 30.8 1.2E+02 0.0025 31.1 5.9 50 410-463 158-210 (365)
430 TIGR00640 acid_CoA_mut_C methy 29.5 1.1E+02 0.0024 26.8 5.0 53 213-270 29-81 (132)
431 cd00248 Mth938-like Mth938-lik 28.2 1.9E+02 0.0041 24.4 6.0 51 227-278 37-87 (109)
432 COG3964 Predicted amidohydrola 27.1 1.9E+02 0.0042 29.2 6.6 75 227-304 136-217 (386)
433 TIGR00496 frr ribosome recycli 25.9 5E+02 0.011 24.0 8.9 47 410-469 67-113 (176)
434 PF00128 Alpha-amylase: Alpha 25.6 35 0.00076 33.6 1.3 28 251-278 46-73 (316)
435 COG0373 HemA Glutamyl-tRNA red 25.4 7.4E+02 0.016 26.3 11.0 49 228-278 226-274 (414)
436 PF09872 DUF2099: Uncharacteri 24.5 15 0.00032 35.6 -1.5 82 222-308 142-224 (258)
437 PF01904 DUF72: Protein of unk 24.1 2.6E+02 0.0057 26.8 7.1 72 398-469 120-202 (230)
438 cd00520 RRF Ribosome recycling 24.0 5.8E+02 0.012 23.6 9.7 48 410-470 72-119 (179)
439 TIGR01019 sucCoAalpha succinyl 23.7 5.2E+02 0.011 25.9 9.2 50 231-284 77-126 (286)
440 COG2877 KdsA 3-deoxy-D-manno-o 23.3 1.1E+02 0.0024 29.7 4.0 39 242-281 159-201 (279)
441 PRK09441 cytoplasmic alpha-amy 23.3 54 0.0012 35.4 2.3 28 251-278 75-102 (479)
442 PF14639 YqgF: Holliday-juncti 23.3 59 0.0013 29.2 2.2 43 228-270 49-91 (150)
443 PF03437 BtpA: BtpA family; I 21.4 1.2E+02 0.0025 30.0 4.0 71 230-305 159-231 (254)
444 TIGR00789 flhB_rel flhB C-term 21.3 77 0.0017 25.4 2.2 20 259-278 29-48 (82)
445 COG2248 Predicted hydrolase (m 20.2 4.5E+02 0.0097 26.0 7.4 49 227-276 187-245 (304)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-117 Score=854.04 Aligned_cols=452 Identities=69% Similarity=1.120 Sum_probs=437.1
Q ss_pred chhhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 010008 68 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 147 (520)
Q Consensus 68 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~ 147 (520)
.+++..|.+.|||++++|++|+.||+.+|+|||||||+|.+|+||++|+|+|||+|||||.|||+|++++|++|.+|++|
T Consensus 15 ~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~R 94 (477)
T KOG2467|consen 15 KLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKR 94 (477)
T ss_pred hhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 010008 148 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 227 (520)
Q Consensus 148 ~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~ 227 (520)
+.++|+++++.|+|||||.|||.||+++++|+++|||+||.+|+++|||+||||++..+++++.+.+|+..+|.+|+.+|
T Consensus 95 ALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG 174 (477)
T KOG2467|consen 95 ALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG 174 (477)
T ss_pred HHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCccc
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 307 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l 307 (520)
.||||.||+.+..+|||+||++.|+|++.+|++++++||+++|++|++|+||++|+++.++.++||+|||||++||||+|
T Consensus 175 ~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsL 254 (477)
T KOG2467|consen 175 YIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSL 254 (477)
T ss_pred ceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeCCC---------cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Q 010008 308 RGPRGGMIFFKKDP---------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 378 (520)
Q Consensus 308 ~GprgG~I~~~~~~---------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~ 378 (520)
+|||||+|+++++. ...|++.++|+.++||++|||||+|.|+|+|+||+++.+++|++|++|+++|++.|+
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala 334 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALA 334 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999863 247899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHH
Q 010008 379 SRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 379 ~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
++|.++|++++++|||||+++||+++.|++|..+++.|+.++|.+|+|++|||.+++.|+|||||+|++|+||+.|+||+
T Consensus 335 ~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~ 414 (477)
T KOG2467|consen 335 SALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFE 414 (477)
T ss_pred HHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 010008 459 AIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 520 (520)
Q Consensus 459 ~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~ 520 (520)
+++++|+++++++.++|...++++++||++.+.++.. ...++.+||++|++|+.+||+|+|
T Consensus 415 ~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~-~~~~v~~Lr~~Ve~fa~~fp~pg~ 475 (477)
T KOG2467|consen 415 KVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKV-MSEEVAELRKRVEEFAGQFPMPGF 475 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCch-hHHHHHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999988877999999999876441 124789999999999999999986
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-106 Score=797.67 Aligned_cols=408 Identities=56% Similarity=0.858 Sum_probs=395.3
Q ss_pred hhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 72 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 72 ~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
..+...||++++++.+|..||++.|+||||||++|++|++|++|.|+|||+|||||+|||+||+++|++|.+|++|++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 010008 152 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 231 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 231 (520)
||+++ +||||+||++||++++.||++|||+||.+++.+|||+|||. +++++|.+|+.++|++|++++.|||
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99997 59999999999999999999999999999999999999995 7899999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCC
Q 010008 232 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 311 (520)
Q Consensus 232 d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gpr 311 (520)
|++++++.++|||+||+|.|.|++.+|++++++||+++|++|++|+||++||++.|++++|+++||||++||||||+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 391 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~ 391 (520)
||+|+++++ ++.++|++++||+.||+|++|.|||+++||+++++++|++|++|+++|++.|++.|.+.|++++++
T Consensus 236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsG 310 (413)
T COG0112 236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSG 310 (413)
T ss_pred ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecC
Confidence 999999985 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|||+|++++|+++.+++|+.++..|+++||.+|+|.+|+|+ +++.+|||||||+++|||||.++||++++++|.+++..
T Consensus 311 gTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 311 GTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999988899999999999999999999999997 89999999999999999999999999999999999985
Q ss_pred HHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 010008 471 TLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 519 (520)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~ 519 (520)
. +. ..+++|++|.+||++||++.
T Consensus 391 ~---------------------~~-----~~~~vk~~V~~l~~~fp~y~ 413 (413)
T COG0112 391 L---------------------KD-----VPAEVKEEVAELCRRFPLYK 413 (413)
T ss_pred c---------------------ch-----hHHHHHHHHHHHHHhCCCCC
Confidence 3 11 57899999999999999974
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=8.8e-99 Score=785.82 Aligned_cols=446 Identities=56% Similarity=0.979 Sum_probs=419.9
Q ss_pred hhhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 010008 69 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 148 (520)
Q Consensus 69 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~ 148 (520)
|.+..|.+.||+++++|.+|.+||+++|+||||||++|+.|+++++|+|+|||+|||||+|||+||+++|++|.+|++|+
T Consensus 124 ~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era 203 (586)
T PLN02271 124 WGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERA 203 (586)
T ss_pred HHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHH
Confidence 44556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccc-ccccccccceEEEEEcccCCCCC
Q 010008 149 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYFESMPYRLDESTG 227 (520)
Q Consensus 149 ~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~-~~~v~~~g~~~~~v~~~~d~~~~ 227 (520)
+++||+++++|++|||++||+.||++++.+|++|||+||+++++||||++|++++. .+.+++.|.+|+.++|++|++++
T Consensus 204 ~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g 283 (586)
T PLN02271 204 LAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTG 283 (586)
T ss_pred HHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccC
Confidence 99999999899999999999999999999999999999999999999999998642 24678899999999999988889
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCccc
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 307 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l 307 (520)
.||+|++++.+..++||+|+++.+.|++.+|+++|++||+++|++|++|+||++|+++.+.+++|+.+||++++|+||||
T Consensus 284 ~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtL 363 (586)
T PLN02271 284 YIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSL 363 (586)
T ss_pred ccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccC
Confidence 99999999977777999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeeCCC--------------cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 308 RGPRGGMIFFKKDP--------------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 308 ~GprgG~I~~~~~~--------------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
+|||||+|+++++. ...+++.++|++++||++||+|++|.|||+++||+++..++|++|++|+++|
T Consensus 364 rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~N 443 (586)
T PLN02271 364 RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKN 443 (586)
T ss_pred CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 99999999998641 1235688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 374 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 374 a~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
++.|++.|.+.|++++++|||+|+++||+++.+++|..+++.|+++||.+|+|.+|+|.+++.++||||||+++|+|||.
T Consensus 444 AkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~ 523 (586)
T PLN02271 444 AQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCL 523 (586)
T ss_pred HHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 010008 454 EKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 520 (520)
Q Consensus 454 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~ 520 (520)
|+||++++++|.++++...++|++. ++++++|++.+.+++ .+.+||++|.+||++||+|+|
T Consensus 524 e~d~~~iA~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~i~~l~~~V~~~~~~fp~p~~ 584 (586)
T PLN02271 524 ESDFETIADFLLRAAQIASAVQREH-GKLQKEFLKGLQNNK-----DIVELRNRVEAFASQFAMPGF 584 (586)
T ss_pred cHHHHHHHHHHHHHHhhhhhhhhhc-chhhhhhhhccCCHH-----HHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999888887765 778899988776543 789999999999999999975
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=5.3e-90 Score=705.29 Aligned_cols=391 Identities=58% Similarity=0.961 Sum_probs=333.0
Q ss_pred ccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC
Q 010008 74 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 153 (520)
Q Consensus 74 l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg 153 (520)
|++.||++++++++|..||+++|+||||||++||.|+++++|.|+|+|+|||||+|||+||+++|++|.+|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHH
Q 010008 154 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 233 (520)
Q Consensus 154 ~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~ 233 (520)
+++++|.+|||+.||+.||++++.||++|||+||.+++.+|||+|||+....+++...|.+|+.++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999876656677789999999999998899999999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCce
Q 010008 234 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 313 (520)
Q Consensus 234 le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG 313 (520)
+++++++++||+||++.|+||+.+|+++|++||+++|++|++|++|.+|+|+.|++++||++||||++||||||+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCCC--------cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC
Q 010008 314 MIFFKKDP--------VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 385 (520)
Q Consensus 314 ~I~~~~~~--------~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G 385 (520)
+|+++++. ...+++.++|++++||+.||+|++|.+||++++|+++++++|++|++|+++|+++|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999220 0123899999999999999999999999999999999888999999999999999999999999
Q ss_pred CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 386 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 386 ~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+++++++|++|++++|+++.++++.+++++|+++||.+|+|.+|+|.+++.++||||||+++|+||++++||+++|++|
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 9999999999999999998899999999999999999999999999888889999999999999999999999999987
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5.7e-78 Score=639.78 Aligned_cols=449 Identities=71% Similarity=1.156 Sum_probs=408.8
Q ss_pred hhhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 010008 69 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 148 (520)
Q Consensus 69 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~ 148 (520)
++...|.+.||+++++|.+|..||+++|+||||||++|+.|++++++.++++|++||||+|||+|++++|++|++|++++
T Consensus 10 ~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~ 89 (475)
T PLN03226 10 WGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRA 89 (475)
T ss_pred cchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHH
Confidence 45566888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 010008 149 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 228 (520)
Q Consensus 149 ~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~ 228 (520)
+++|+.+.+.|.+|||++||+.||.+++.+|++|||+||+++.++|||++|++......++..+.++++++|+++++++.
T Consensus 90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~ 169 (475)
T PLN03226 90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL 169 (475)
T ss_pred HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence 99999999888899999999999999999999999999999999999999997654445566777788889988888899
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccC
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 308 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~ 308 (520)
+|+++|++++..++||+|+++.++|+...|+++|+++|+++|++|++|+||++|++..+..++|++++|++++|+||||+
T Consensus 170 iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 170 IDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLR 249 (475)
T ss_pred cCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccccc
Confidence 99999999998778999999888899999999999999999999999999999999988888888899999999999999
Q ss_pred CCCceEEEeeCCCc--------chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 010008 309 GPRGGMIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 309 GprgG~I~~~~~~~--------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~ 380 (520)
||+||+|+++++.. .+.++.+.++...||+.+|+|+++.++|+++||+++..+++++|.+++.+|+++|++.
T Consensus 250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~ 329 (475)
T PLN03226 250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANR 329 (475)
T ss_pred CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999987421 1124556788888999999999999999999999998888999999999999999999
Q ss_pred HHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 381 LVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 381 L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
|.+.|++++++++++|++++|+++.++++.++.+.|+++||.+|++.+|++.++..+++||+||+++|+||++++||+++
T Consensus 330 L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~i 409 (475)
T PLN03226 330 LMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKV 409 (475)
T ss_pred HHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHH
Confidence 99999999998889999999998889999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 010008 461 ADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 520 (520)
Q Consensus 461 a~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~ 520 (520)
+++|.++++.....+++. ++++++|...++.+.. ...++++|++|.+||++||+|++
T Consensus 410 a~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~fp~~~~ 466 (475)
T PLN03226 410 AEFLHRAVTIALKIQKEH-GKKLKDFKKGLESNDF--SKDIEALRAEVEEFATSFPMPGF 466 (475)
T ss_pred HHHHHHHHHHhhhhhhhc-ccchhhhhhhcccccc--HHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999887777665 6888898766543310 13689999999999999999874
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4.5e-78 Score=629.56 Aligned_cols=424 Identities=42% Similarity=0.707 Sum_probs=383.9
Q ss_pred hhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 72 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 72 ~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
..|.+.||+++++|++|.+||+++|+||||||++|+.|++++++.|+|||+|||||+|||+||+++|++|.+|+++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHhhCCC-------------------------------CCEEEEcCCCCCcccccc
Q 010008 152 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG 200 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs~A~~~~l~all~p-------------------------------GD~Vl~~~~~~~ghls~g 200 (520)
||+++ +||||+||+.||+++++++++| ||+||.+++.+|||++||
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 5999999999999999999987 899999999999999999
Q ss_pred ccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhh
Q 010008 201 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 280 (520)
Q Consensus 201 ~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~ 280 (520)
+ ..++.|.+++.++|+++++++.+|++++++++++.+|++|+++.|++++..|+++|++||+++|+++++|+||+
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 6 56788999999999999878999999999999997788888889999999999999999999999999999999
Q ss_pred cccccccccC---CCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHH
Q 010008 281 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 357 (520)
Q Consensus 281 ~gli~~~~~~---~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~ 357 (520)
+|++..+..+ +|+.++||+++|+||||+||+||+|++++ ++.+.++++ .|+++|+++.+.++|+++++.+
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHH
Confidence 9999876654 56678999999999999999999999998 788888776 4899999999999999999999
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCC
Q 010008 358 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALV 436 (520)
Q Consensus 358 ~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~ 436 (520)
+.+++|++|++++++|+++|++.|.+.|++++.++|++|++++++.+.+.++..+.+.|+++||.|+++.+|+++ +++.
T Consensus 332 ~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~ 411 (493)
T PRK13580 332 ARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWY 411 (493)
T ss_pred HhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCC
Confidence 988888999999999999999999999999988778999999999876666678889999999999999999986 6677
Q ss_pred CCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCC
Q 010008 437 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFP 516 (520)
Q Consensus 437 ~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp 516 (520)
+++||||++++|+||++++||++++++|.++++.....+.. .|+++++ +...+ + ..++++|++|.+||++||
T Consensus 412 ~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~-~~~~~~~--~~~~~-~----~~~~~~~~~v~~~~~~~p 483 (493)
T PRK13580 412 TSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTA-EGAPSKA--KYELD-E----GVAQEVRARVAELLARFP 483 (493)
T ss_pred CceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhcccc-ccccccc--cccCC-H----HHHHHHHHHHHHHHHhCC
Confidence 89999999999999999999999999999998765332222 2555555 22222 2 368899999999999999
Q ss_pred C-CC
Q 010008 517 I-PG 519 (520)
Q Consensus 517 ~-~~ 519 (520)
+ |+
T Consensus 484 ~~~~ 487 (493)
T PRK13580 484 LYPE 487 (493)
T ss_pred CCCc
Confidence 8 54
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.9e-64 Score=537.54 Aligned_cols=442 Identities=64% Similarity=1.071 Sum_probs=385.9
Q ss_pred hhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 010008 70 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 149 (520)
Q Consensus 70 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~ 149 (520)
++..|...||++++++.+|.++|+++|+|+||||++||.|++++.+.++++|++|+|+.+|+.|+++.+.+|+.++++++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a 90 (452)
T PTZ00094 11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL 90 (452)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence 45558888999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 010008 150 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 229 (520)
Q Consensus 150 ~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 229 (520)
++||+++++|.++++++||++||.+++.++++|||+|++.+.+|++|++++.......+.+.+..+++..|++++ ++.+
T Consensus 91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence 999999888878999999999999999999999999999999999999987543222344556667778888874 4899
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCC
Q 010008 230 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 309 (520)
Q Consensus 230 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~G 309 (520)
|++++++++++.+|++|+++.+.++...|+++|.++|+++|+++++|++|++|++..+..+.++.++|++++|+||||+|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999977689999887778888999999999999999999999999999998887777777999999999999999
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEe
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 389 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~ 389 (520)
|+||+++++++.. ..+...++...+|.++|+++.+.++++++|++++...+++++.+++.+++++|.+.|.+.|+++.
T Consensus 250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~ 327 (452)
T PTZ00094 250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLV 327 (452)
T ss_pred CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 9999999977311 12445666678888899999999999999999987777889999999999999999988899998
Q ss_pred cCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 390 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 390 ~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+++++|..++++...++++..+...|+++||.++++.+|++..+..+++||+|++.+|++|++++||++++++|.++++
T Consensus 328 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 328 TGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVK 407 (452)
T ss_pred cCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 76556787788887778888999999999999999888888765666899999999999999999999999999999999
Q ss_pred HHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCCC
Q 010008 470 ITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPGV 520 (520)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~ 520 (520)
....++++. +++..+|.+...++ .++.++|++|.+||++||+|++
T Consensus 408 ~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 408 LAQEIQKQV-GKKLVDFKKALEKN-----PELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred HHhhhhhhc-ccchhhhhhhcccH-----HHHHHHHHHHHHHHHhCCCCCC
Confidence 877666555 55545554333332 3789999999999999999984
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1.4e-55 Score=464.25 Aligned_cols=412 Identities=57% Similarity=0.872 Sum_probs=357.8
Q ss_pred hhhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 010008 69 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 148 (520)
Q Consensus 69 ~~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~ 148 (520)
|+.+.|++.|||++++|++|..+|.+.|+|++|||+++|.|++++.+.+.++|..|++|.|+++|++..+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred HHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 010008 149 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 228 (520)
Q Consensus 149 ~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~ 228 (520)
+++||.+. +.|.+.||+.||.+++.++++|||+|++.+..|++++.+|. ...+.+.+++.+.+++++.++.
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~ 154 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTGL 154 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccCC
Confidence 99999986 45667899999999999999999999999999988776664 2223444455567777766788
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccC
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 308 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~ 308 (520)
+|++++++.++..+||+|+++.+.++...|+++|.++|+++|++|++|+||+.|.+..+....++.++|++++|+||+|+
T Consensus 155 ~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~ 234 (416)
T PRK13034 155 IDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLR 234 (416)
T ss_pred cCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCC
Confidence 99999999986668999999878888889999999999999999999999999999888766676789999999999999
Q ss_pred CCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEE
Q 010008 309 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 388 (520)
Q Consensus 309 GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v 388 (520)
||.||+++++++ ++.++++...+++++++++.+.+++++.++.+....+..++.+++.+|+++|++.|.+.|+++
T Consensus 235 g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~~ 309 (416)
T PRK13034 235 GPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYDL 309 (416)
T ss_pred CCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCEe
Confidence 999999999874 566677777888878888888888888788776655567889999999999999999999998
Q ss_pred ecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 389 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 389 ~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..+++++|.+++++...+.+...+.+.|+++||.++...+|++. .|..+++||+|++++|++|++++|++++++.|.++
T Consensus 310 ~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 310 VSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred ccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence 76446789988888777777788889999999999988788864 56678899999999999999999999999999998
Q ss_pred HHHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCC
Q 010008 468 VEITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIP 518 (520)
Q Consensus 468 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~ 518 (520)
++.. ++. +.++++|++|.+|++.||++
T Consensus 390 ~~~~--------------------~~~----~~~~~~~~~~~~~~~~~~~~ 416 (416)
T PRK13034 390 LDDL--------------------GNA----ALEQRVRKEVKALCSRFPIY 416 (416)
T ss_pred HhcC--------------------CCH----HHHHHHHHHHHHHHHhCCCC
Confidence 7631 011 25789999999999999963
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=6.9e-50 Score=422.32 Aligned_cols=412 Identities=54% Similarity=0.844 Sum_probs=344.5
Q ss_pred hhhhccccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 010008 70 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 149 (520)
Q Consensus 70 ~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~ 149 (520)
+..+|.+.||+++++|+++..++++.|+|+++||++|+.|++++...+.++|..|+++.+|+.|.+..+.+|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999888999999999999999999999988899999
Q ss_pred HHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 010008 150 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 229 (520)
Q Consensus 150 ~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 229 (520)
+++|++++ +|.++||++|+..++.++++|||+|++++++|+++++++. .+.+.+.+.+++.++++++++.+
T Consensus 82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~ 152 (416)
T PRK00011 82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLI 152 (416)
T ss_pred HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCc
Confidence 99999874 4666899999999999999999999999999988876553 22233334577777777556899
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCC
Q 010008 230 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 309 (520)
Q Consensus 230 D~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~G 309 (520)
|++++++++++.+||+|+++.+++|...|+++|.++|+++|+++++|++|+.|++..+..+.++.++|++++|+||+++|
T Consensus 153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g 232 (416)
T PRK00011 153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG 232 (416)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence 99999999976589999998788887889999999999999999999999998876655555555789999999999999
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEe
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 389 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~ 389 (520)
|+||+++++++ ++.+++.....++..+++....++++..++..+...+++++.+++.++++++.+.|.+.|+++.
T Consensus 233 ~~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 307 (416)
T PRK00011 233 PRGGLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVV 307 (416)
T ss_pred CCceEEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 99999999754 6777777666676677777778888777776655445688899999999999999999999876
Q ss_pred cCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 390 SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 390 ~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
..++.++++++++.+.+++...+.+.|++.||.++....|.+. .++.+.++|+|+..++++|++++|++++++.|++++
T Consensus 308 ~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 308 SGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred ecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 5444568888887655566778889999999999876556543 455677899999999999999999999999999887
Q ss_pred HHHHHHHHhhcccchhhhhcccCCCCccchHHHHHHHHHHHHHHhhCCCCC
Q 010008 469 EITLEAKKLVQGSKLQDFMNFVTSPNFSLMNNVADLRGRVEALTTQFPIPG 519 (520)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~ 519 (520)
+... +++ .++++|++|.+|+++||.+.
T Consensus 388 ~~~~-------------------~~~-----~~~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 388 DNPD-------------------DEA-----VIEEVKEEVKELCKRFPLYK 414 (416)
T ss_pred hccC-------------------cch-----hHHHHHHHHHHHHHhCCCCC
Confidence 6420 112 57899999999999999653
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=4.2e-47 Score=399.28 Aligned_cols=383 Identities=62% Similarity=0.978 Sum_probs=321.6
Q ss_pred ccChHHHHHHHHHHHHhhccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC
Q 010008 76 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 155 (520)
Q Consensus 76 ~~d~~~~~~~~~e~~~~~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~ 155 (520)
++|++++++|.+|..+++++|+|++++|++++.|++++.+.+..+|..|.|+.++|+|.+..+++|+.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999989999999999999999999999999989999999999999999999999988889999999998
Q ss_pred CCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHH
Q 010008 156 ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 235 (520)
Q Consensus 156 ~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le 235 (520)
+. +|.++||++|+.+++.++++|||+|++.+++|++++.++... .+...|..+..++++.+++++.+|+++++
T Consensus 82 ~~----~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 YA----NVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred ce----eeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 63 577789999999999999999999999999999887765421 13344553444554444336899999999
Q ss_pred HHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCceEE
Q 010008 236 KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMI 315 (520)
Q Consensus 236 ~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG~I 315 (520)
+.+...+||+|+++.++||...|+++|.++|+++|+++++|++|+.|++..+..+.++.++|++++|+||+|+|||||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99975589999998888988889999999999999999999999999877665455555789999999999999999999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 395 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~ 395 (520)
+++++ ++.+++.....++..++++...+++++.++.+....+++++.+++.++++++.+.|.+.|+.++.....+
T Consensus 235 ~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 309 (402)
T cd00378 235 LTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDN 309 (402)
T ss_pred EeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCC
Confidence 99874 5777776655666777777788888877877665445678889999999999999998999886433457
Q ss_pred eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCC-CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~-~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+++|+++.+.+.+...+.+.|+++||.++....|+... +..+.++|||+..+|++|++++|++++++.|.++++.
T Consensus 310 ~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 310 HLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred eEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 88888887555667788888999999998766777642 3456789999999999999999999999999998864
No 11
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-31 Score=273.52 Aligned_cols=339 Identities=19% Similarity=0.200 Sum_probs=248.8
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++. .+|+.+.+++...+.+... .| + ....+.++++...+++.+.+|++.+.- -+|.+|+|+ +
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y-----~-~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HY-----T-PSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CC-----C-CCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence 5789988876 6889999999887765321 12 2 223345777788899999998653211 247789998 9
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcEEEE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~--~~~~iD~d~le~~i~~~~pklIi~ 248 (520)
|++.+++++++|||+|++++|.|..+ ...+.+.|. ++++++++. .++.+|.++|++++++ ++|+|++
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y--------~~~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~l 169 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSY--------EAAVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIIL 169 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCH--------HHHHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 99999999999999999999866543 234566776 677777643 3689999999999999 9999999
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC--c---ccEEEeccCccc--CCCCceEE
Q 010008 249 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y---CDVVTTTTHKSL--RGPRGGMI 315 (520)
Q Consensus 249 ~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~--~---aDiv~~S~hK~l--~GprgG~I 315 (520)
++||||| .. .+++|.++|++||++||+|++ |.++++.+. +++.+. . .-|++.|++|++ +|||.||+
T Consensus 170 n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 170 NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 9999998 33 578899999999999999999 789998874 555443 2 237889999985 89999999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 393 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt 393 (520)
++++. ++.+.+.+..-....+.+...+.++.+ ||+.-.. ...+...+.+.++++.+.+.|.+. |+.+..+..
T Consensus 249 v~~~~-----~l~~~~~~~~~~~~~~~~~~~Q~aa~~-aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~ 322 (393)
T COG0436 249 VGPPE-----ELIAALRKLKSYLTSCAPTPAQYAAIA-ALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE 322 (393)
T ss_pred ecChH-----HHHHHHHHHHHhcccCCCHHHHHHHHH-HhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence 99942 566655532222234556666666554 6664321 233566678999999999999974 588877323
Q ss_pred CCeeEEEEecCCCCCH-HHHHHHHhhcCeEEcCCCCCCCC-CC-CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 394 DNHLVLVDLRPMGIDG-ARVEKILDMASITLNKNSVPGDK-SA-LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 394 ~~~~~~vd~~~~g~~~-~~~~~~L~~~gI~v~~~~~Pg~~-~~-~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
...++|+++... .+. +.+.++|++.||.| +||.. +. .+.++||++.. ..++++++..+.+.+.+.
T Consensus 323 Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v----~PG~~Fg~~~g~~~vRis~~------~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 323 GAFYLFPKIPEL-LDSEEFAKKLLEEAGVAV----VPGSGFGEPPGEGYVRLSLA------TSEETLEEALRRLARFLA 390 (393)
T ss_pred eeEEEEeecCCC-CCHHHHHHHHHHhCCEEE----ecccccCCCCCCCeEEEEEe------cCHHHHHHHHHHHHHHHH
Confidence 457778888643 455 55778889999999 77765 33 35689999854 235777777777776654
No 12
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-30 Score=270.52 Aligned_cols=348 Identities=22% Similarity=0.236 Sum_probs=259.7
Q ss_pred cceEec-CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-HH
Q 010008 95 SLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS-PA 171 (520)
Q Consensus 95 ~i~Lia-sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~-~~~~~~V~~~sGs-~A 171 (520)
.+.|.- .....|..|.+++..++.+.|+....+ -+.......+..+.+|+.+++++|+++ + +|..|.|+ +|
T Consensus 23 ~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~--~~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRG--AHTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEA 96 (405)
T ss_pred eEEecCcccccCCHHHHHHHHHHHHhhcCCcCcc--cchHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHH
Confidence 345542 334689999999998876665443222 122334444555689999999999995 5 45567777 89
Q ss_pred HHHHHHhh---CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 010008 172 NFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 172 ~~~~l~al---l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~ 248 (520)
+..+..++ +++||+|++.+.+|.+++..+.... ...|. ++..++++ +++.+|.|++++.+++ +||+|.+
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~----~~~Ga--~v~~i~~~-~~g~~~~~~~~~~i~~-~Tklvai 168 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELA----KRTGA--KVRVIPLD-DDGLLDLDALEKLITP-KTKLVAL 168 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHH----HhcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CceEEEE
Confidence 99999988 7999999999999988776554221 22354 56666677 6899999999999988 9999999
Q ss_pred cCCCC-C-CCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchh
Q 010008 249 GASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 325 (520)
Q Consensus 249 ~~s~~-p-~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~ 325 (520)
+.-+| . ...|+++|.++||++|+++++|++|++|....++... +||++++|.||||.||.| |+++++++
T Consensus 169 s~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l---~~Df~afsgHKwl~gP~GiGvLy~r~~----- 240 (405)
T COG0520 169 SHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQEL---GCDFLAFSGHKWLLGPTGIGVLYVRKE----- 240 (405)
T ss_pred ECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhc---CCCEEEEcccccccCCCceEEEEEchH-----
Confidence 85444 3 3889999999999999999999999999875554332 699999999999999988 99999984
Q ss_pred hHHHhhccc---------------------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-
Q 010008 326 ELESAINNA---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE- 383 (520)
Q Consensus 326 ~l~~~i~~~---------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~- 383 (520)
+.+.+... ...+-.|+|+...+.+++.|++.++..++++..++.....+++.+.|.+
T Consensus 241 -~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~ 319 (405)
T COG0520 241 -LLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSEL 319 (405)
T ss_pred -HHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 43333111 0112268899999999999999888777788888888889999999988
Q ss_pred CCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCC---CCCCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 384 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV---PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 384 ~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~---Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
.+++++.+.......++.+.-.+++..++...|.+.||.++.+.. |....-..++.+|+|...++| ++|++++
T Consensus 320 ~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l 395 (405)
T COG0520 320 PGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRL 395 (405)
T ss_pred CCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHH
Confidence 578888754312333444444567889999999999999986531 221111124559999998887 8999999
Q ss_pred HHHHHHHHH
Q 010008 461 ADFIHEGVE 469 (520)
Q Consensus 461 a~~i~~~l~ 469 (520)
++.|+++..
T Consensus 396 ~~aL~~~~~ 404 (405)
T COG0520 396 LEALKKALA 404 (405)
T ss_pred HHHHHHHhh
Confidence 999988653
No 13
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.97 E-value=2.6e-28 Score=259.21 Aligned_cols=342 Identities=17% Similarity=0.213 Sum_probs=241.3
Q ss_pred ccceEecCCC---CCh-H---HHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 010008 94 KSLELIASEN---FTS-R---AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 166 (520)
Q Consensus 94 ~~i~Liasen---~~~-~---~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~ 166 (520)
+.|+|-.++. +.+ . ++.+++...+... ...|++...+.+++ +.++++||.+. + +.++
T Consensus 37 ~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr----eaia~~~~~~~----v-v~t~ 100 (460)
T PRK13238 37 NPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE----DAVKDIFGYPY----T-IPTH 100 (460)
T ss_pred CEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH----HHHHHHhCCCc----E-EECC
Confidence 6677777664 322 2 4677766666422 12355556677777 56778888764 2 5556
Q ss_pred ChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC---------CCCCCCHHHHHHH
Q 010008 167 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEKT 237 (520)
Q Consensus 167 sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~---------~~~~iD~d~le~~ 237 (520)
+|++|+.+++.++++||| |+++++.+..+ ...+...|. +++.+++++ .++.+|+++|++.
T Consensus 101 ggt~A~~~~~~all~pGD-Vii~~p~~~~~--------~~~i~~~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~ 169 (460)
T PRK13238 101 QGRAAEQILFPVLIKKGD-VVPSNYHFDTT--------RAHIELNGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLEAL 169 (460)
T ss_pred CHHHHHHHHHHHhCCCCC-EEccCCcccch--------HHHHHHcCC--EEEEEeccccccccccccccCCcCHHHHHHH
Confidence 777999999999999999 88777633322 123445565 566666642 1245999999999
Q ss_pred hhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCEEEEechhhcc-cccc-----cccCCC--------CC
Q 010008 238 AILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------FK 294 (520)
Q Consensus 238 i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~li~D~Ah~~g-li~~-----~~~~~p--------~~ 294 (520)
+++. ++|+|+++.|+||+ .. ++++|+++|++||++||+|+||+.+ +++. +..... ..
T Consensus 170 i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s 249 (460)
T PRK13238 170 IEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFS 249 (460)
T ss_pred HhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcc
Confidence 9852 68999999888874 33 4679999999999999999998654 2221 111111 23
Q ss_pred cccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCC--C--CCCCChHHHHHHHHHHHHHhcCchhHHHHHHH
Q 010008 295 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 370 (520)
Q Consensus 295 ~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p--~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 370 (520)
++|++++|++|.+.+|.||+|+++++ ++.++++...+. + .+|+++...++|++++|++.... +|.+..
T Consensus 250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~ 321 (460)
T PRK13238 250 YADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAYR 321 (460)
T ss_pred cCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHHH
Confidence 68999999999999999999999864 788877665422 2 36777777788999898876554 445555
Q ss_pred HHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC-------CC-CHHHHHHHHhhcCeEEcCCC---CCCCCC-----C
Q 010008 371 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI-DGARVEKILDMASITLNKNS---VPGDKS-----A 434 (520)
Q Consensus 371 ~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~-------g~-~~~~~~~~L~~~gI~v~~~~---~Pg~~~-----~ 434 (520)
.+++++|.+.|.+.|++++.+ ...|++++|+... +. +...+..++++.||.+.... .+.|.. .
T Consensus 322 ~~~~~~l~~~L~~~G~~~~~p-~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~ 400 (460)
T PRK13238 322 IGQVEYLGEGLEEAGVPIQTP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLP 400 (460)
T ss_pred HHHHHHHHHHHHHCCCCeEcc-CCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccC
Confidence 667899999999999999865 3469999998643 12 23467788899999994432 222221 1
Q ss_pred CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 435 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 435 ~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
.....+|++++ +|+++.+.++++++.|.++.+....+
T Consensus 401 ~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~~~~ 437 (460)
T PRK13238 401 APAELLRLAIP---RRVYTQSHMDYVAEALKAVKENRESI 437 (460)
T ss_pred CccceEEEecc---cccCCHHHHHHHHHHHHHHHHhHhhc
Confidence 12478999977 78999999999999999988765433
No 14
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=7.9e-28 Score=248.77 Aligned_cols=331 Identities=18% Similarity=0.122 Sum_probs=235.3
Q ss_pred ceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 010008 96 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 175 (520)
Q Consensus 96 i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~ 175 (520)
+++++++..+|++|++++...+.. + +|- . ..++.+.+++++++++|++.++ ..+.+.+|++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~-----~---~~~---~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG-----H---RSP---E-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC-----C---CCH---H-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 468899999999999999654321 1 111 1 2233334568999999996432 123456678999999
Q ss_pred HHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 010008 176 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 255 (520)
Q Consensus 176 l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 255 (520)
+.++++|||+|++.++.|.++ .+. ..+...|. +++.+++++ ++.+|++++++.+++++|++|+++.++|++
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~---~~~---~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGD---RWA---DMAERYGA--DVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCchhH---HHH---HHHHHhCC--CeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 999999999999988755432 110 12233454 555666663 578999999999976689999988776654
Q ss_pred --CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc
Q 010008 256 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 256 --~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~ 332 (520)
..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||||.+|.| |+++.++ ++.+.+.
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~---~~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~~~ 208 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDE---WGVDVAYTGSQKALGAPPGLGPIAFSE------RALERIK 208 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCccccccc---cCccEEEecCchhccCCCCcceeEECH------HHHHHHH
Confidence 78999999999999999999999887754322111 1589999999999999877 9999987 5555443
Q ss_pred c--cCC----------------CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCC-C
Q 010008 333 N--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-S 393 (520)
Q Consensus 333 ~--~~~----------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g-t 393 (520)
. ... ....++++...++++..+++.+...+++...++..++++.+.+.|.+.|+.+..+. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 288 (356)
T cd06451 209 KKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPEL 288 (356)
T ss_pred hcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc
Confidence 2 000 02345677777888878888766656678888899999999999998899887531 1
Q ss_pred -CCeeEEEEecCCCCCHHHHHHHHhhc-CeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 394 -DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 394 -~~~~~~vd~~~~g~~~~~~~~~L~~~-gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.+.+.++.+ +.+.+...+.+.|.+. ||.+..+ .. +..+++||+++..+++ ++|++++.+.+++++
T Consensus 289 ~~~~~~~~~~-~~~~~~~~~~~~L~~~~gI~~~~g----~~-~~~~~~iRis~~~~~~----~e~v~~~~~~l~~~~ 355 (356)
T cd06451 289 RSPTVTAVLV-PEGVDGDEVVRRLMKRYNIEIAGG----LG-PTAGKVFRIGHMGEAT----REDVLGVLSALEEAL 355 (356)
T ss_pred CCCceEEEEC-CCCCCHHHHHHHHHHhCCEEEecc----cc-cccCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 122334443 3356778888888877 9999543 21 2235689999876654 899999999998875
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=2.7e-28 Score=245.93 Aligned_cols=339 Identities=20% Similarity=0.250 Sum_probs=254.1
Q ss_pred CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI 179 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al 179 (520)
...++.|.|+++|..+++..| |.|..-+.-|.+..+.+| .|++.+++++|+++. +|..|||. ++|.+++.+.
T Consensus 9 ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPE----EIIFTSGATESNNLAIKGA 81 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEecCCcHHHHHHHHhh
Confidence 345789999999999998876 788776555777777777 689999999999996 34457766 9999888773
Q ss_pred --C----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 010008 180 --L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 253 (520)
Q Consensus 180 --l----~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 253 (520)
. +.|.+|++...+|.+.+....+ + ...+|++.+++++ .+|.+|+++|++++++ +|-+|.+.+.||
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~-----L--e~~g~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~aNn 152 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRY-----L--ERQGFEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMHANN 152 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHHH-----H--HhcCCeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEeccc
Confidence 2 2478999999998776543321 1 1223577788888 4799999999999987 788887776665
Q ss_pred --CCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHh
Q 010008 254 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 330 (520)
Q Consensus 254 --p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~ 330 (520)
++.+|+++|.++|+++|+++++|++|+.|-++.+.... ++|++++|.|| +.||+| |+++.++.. +
T Consensus 153 E~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~---~vD~ls~SaHK-~~GpkGiGaLyv~~~~--------~ 220 (386)
T COG1104 153 ETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEEL---GVDLLSFSAHK-FGGPKGIGALYVRPGV--------R 220 (386)
T ss_pred CeeecccHHHHHHHHHHcCCeEEEehhhhcCceecccccc---CcceEEeehhh-ccCCCceEEEEECCCC--------c
Confidence 44999999999999999999999999999876554332 48999999999 679999 999997641 1
Q ss_pred hcccCCCC------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecCCCCCeeEEEEe
Q 010008 331 INNAVFPG------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSDNHLVLVDL 402 (520)
Q Consensus 331 i~~~~~p~------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~gt~~~~~~vd~ 402 (520)
+...+..| -.|+.+.+.|++++.|++++. .+++....++.+.++.|.+.|.+. ++.+.......-...+.+
T Consensus 221 ~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~ 299 (386)
T COG1104 221 LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNF 299 (386)
T ss_pred cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEE
Confidence 22211211 268899999999999999876 467778888889999999999873 444433221111113334
Q ss_pred cCCCCCHHHHHHHHhhcCeEEcCCCC-------CCCC-------CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 403 RPMGIDGARVEKILDMASITLNKNSV-------PGDK-------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 403 ~~~g~~~~~~~~~L~~~gI~v~~~~~-------Pg~~-------~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
...++.++.+...|+.+||.++.++- |.+. .....+.||+|+...|+ ++|++++++.+.+++
T Consensus 300 ~f~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~~~~~~l~~~i 375 (386)
T COG1104 300 SFPGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEIDAAAEALKEII 375 (386)
T ss_pred EeCCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHHHHHHHHHHHH
Confidence 44578899999999999999987641 1110 01224679999987776 899999999999998
Q ss_pred HHHH
Q 010008 469 EITL 472 (520)
Q Consensus 469 ~~~~ 472 (520)
+...
T Consensus 376 ~~lr 379 (386)
T COG1104 376 KRLR 379 (386)
T ss_pred HHHh
Confidence 8653
No 16
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=7.4e-28 Score=253.17 Aligned_cols=344 Identities=20% Similarity=0.243 Sum_probs=246.5
Q ss_pred ccceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-
Q 010008 94 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~-ryy~g~~~~d~lE~~a~~~~~~lfg~-~~~~~~~~V~~~sGs- 169 (520)
+.+.|. ++..++|+.|.+++...+.+.+ +.+.. .+..+..+.+.++ .+++.+++++|+ +++ +|..++|+
T Consensus 19 ~~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~~~~~t 91 (401)
T PRK10874 19 AGVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAK----NIVWTRGTT 91 (401)
T ss_pred ceEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEECCHH
Confidence 357776 4567899999999998887654 44432 2233444555555 567899999999 555 44445655
Q ss_pred HHHHHHHHhh----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 010008 170 PANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 170 ~A~~~~l~al----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pkl 245 (520)
+++..++.++ ++|||+|++.+++|.+.+.... ......|. +++.++++ .++.+|++++++.+++ +|++
T Consensus 92 ~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~l 163 (401)
T PRK10874 92 ESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGA--KVVKLPLG-ADRLPDVDLLPELITP-RTRI 163 (401)
T ss_pred HHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCC--EEEEEecC-CCCcCCHHHHHHhcCc-CcEE
Confidence 8999888887 4899999999998765432111 11233455 55555565 3578999999999987 8999
Q ss_pred EEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCc
Q 010008 246 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV 322 (520)
Q Consensus 246 Ii~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~ 322 (520)
|++++++|++ ..|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+||+ .||.| |+++.++
T Consensus 164 v~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~--- 236 (401)
T PRK10874 164 LALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQAL---DIDFYAFSGHKL-YGPTGIGVLYGKS--- 236 (401)
T ss_pred EEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhc---CCCEEEEecccc-cCCCccEEEEEch---
Confidence 9999888775 789999999999999999999999877654332111 589999999995 57887 9999887
Q ss_pred chhhHHHhhcccC--------------------CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Q 010008 323 LGVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 382 (520)
Q Consensus 323 ~~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~ 382 (520)
++.+.+.... .....|+++...++++..|++.+.+.++....+++...++++.+.|.
T Consensus 237 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~ 313 (401)
T PRK10874 237 ---ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALA 313 (401)
T ss_pred ---HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 4444432111 11225788888999999898877666666677888888889999998
Q ss_pred HC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHHHH
Q 010008 383 EL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 383 ~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
+. |++++.+. .+.++.+.+. +++.+++.+.|.+.||.++.+..+... .....++||+|+..++| ++|++
T Consensus 314 ~~~g~~~~~~~-~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid 386 (401)
T PRK10874 314 KLPGFRSFRCQ-DSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVD 386 (401)
T ss_pred cCCCEEEeCCC-CCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHH
Confidence 74 88876532 3455555553 456788888999999999654321100 00124789999988765 89999
Q ss_pred HHHHHHHHHHH
Q 010008 459 AIADFIHEGVE 469 (520)
Q Consensus 459 ~la~~i~~~l~ 469 (520)
++++.|+++++
T Consensus 387 ~ll~al~~~~~ 397 (401)
T PRK10874 387 ALVNAVDRALE 397 (401)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 17
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=2.4e-27 Score=248.99 Aligned_cols=343 Identities=20% Similarity=0.222 Sum_probs=243.0
Q ss_pred cceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 010008 95 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P 170 (520)
Q Consensus 95 ~i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~-ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs-~ 170 (520)
.+.|. ++..++|+.|++++...+...+ +.|.. .+..+.+..+.++ .+++.+++++|++ ++ +|..++|+ +
T Consensus 17 ~iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~t~g~t~ 89 (398)
T TIGR03392 17 TVYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAE----NIVWTRGTTE 89 (398)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCChHH
Confidence 57776 4557899999999988876443 33421 2233334344444 5778999999995 54 34445655 9
Q ss_pred HHHHHHHhh----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 171 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 171 A~~~~l~al----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
++..++.++ ++|||+|++.+++|.+.+.... ......|. +++.++++ .++.+|++++++++++ +|++|
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv 161 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGA--KVVKLPIG-ADLLPDIRQLPELLTP-RTRIL 161 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHHhcc-CceEE
Confidence 999888887 5899999999998765422111 11233454 66666666 3477999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcc
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 323 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 323 (520)
++++++|++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||. .||.| |+++.++
T Consensus 162 ~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~---~~d~~~~s~~K~-~gp~G~G~l~~~~---- 233 (398)
T TIGR03392 162 ALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQAL---DIDFYAFSGHKL-YGPTGIGVLYGKT---- 233 (398)
T ss_pred EEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhc---CCCEEEEecccc-cCCCceEEEEEcH----
Confidence 998888775 789999999999999999999999777553222111 589999999995 57776 9999887
Q ss_pred hhhHHHhhcccC--------------------CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 324 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 324 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
++.+++.... .....|+++...++++..|++.+.+.+++...++..+.++++.+.|.+
T Consensus 234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 234 --ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred --HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 4444432110 011257889989999999998776666677778888888889888887
Q ss_pred C-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC--CC-CCCCEEEEccCCccccCCCHHHHHH
Q 010008 384 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK--SA-LVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 384 ~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~--~~-~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
. |+++.... .++++.+.+. +++++++.+.|.+.||.++.+...... .. ..+++||+|++.++| ++|+++
T Consensus 312 l~g~~~~~~~-~~~i~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~ 384 (398)
T TIGR03392 312 LPGFRSFRCP-GSSLLAFDFA--GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDA 384 (398)
T ss_pred CCCeEEeCCC-CCcEEEEEeC--CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHH
Confidence 4 88876432 3455555543 567788888999999999754311000 00 024689999987765 899999
Q ss_pred HHHHHHHHHH
Q 010008 460 IADFIHEGVE 469 (520)
Q Consensus 460 la~~i~~~l~ 469 (520)
+++.|+++++
T Consensus 385 l~~~l~~~~~ 394 (398)
T TIGR03392 385 LVDAVGAALE 394 (398)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 18
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=2.1e-27 Score=250.19 Aligned_cols=345 Identities=17% Similarity=0.134 Sum_probs=243.4
Q ss_pred cceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HH
Q 010008 95 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 95 ~i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~-~~~~~~~~V~~~sGs-~A 171 (520)
.+.|. ++..++|+.|++++...+...+.....+ .+..+....+.++ .+++.+++++|+ +++ +|..++|+ ++
T Consensus 24 ~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~~ 97 (406)
T PRK09295 24 LAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRG-IHTLSAQATEKME-NVRKQAALFINARSAE----ELVFVRGTTEG 97 (406)
T ss_pred eEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCc-ccHHHHHHHHHHH-HHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence 46775 4667899999999998887544221122 2233444555565 467899999998 454 34456666 88
Q ss_pred HHHHHHh----hCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 010008 172 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 172 ~~~~l~a----ll~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi 247 (520)
+..++.+ +++|||+|++.+++|.+.+.... ......|. +++.++++ +++.+|++++++++++ +|++|+
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ----MLCARVGA--ELRVIPLN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 8888776 46899999999988765432111 11123454 55566665 4578999999999987 899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcch
Q 010008 248 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 324 (520)
Q Consensus 248 ~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~ 324 (520)
+++++|++ ..|+++|.++|+++|+++++|++|..|....++.. -++|++++|+|| +.||.| |+++.+++
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~---~~~D~~~~s~~K-~~gp~G~G~l~~~~~---- 241 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQA---LDCDFYVFSGHK-LYGPTGIGILYVKEA---- 241 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchh---cCCCEEEeehhh-ccCCCCcEEEEEchH----
Confidence 99887776 88999999999999999999999987765332211 168999999999 567887 99999873
Q ss_pred hhHHHhhccc---------------------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 325 VELESAINNA---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 325 ~~l~~~i~~~---------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
+.+.+... ......|+++...++++..|++.+.+.+.+...++..+.++++.+.|.+
T Consensus 242 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 319 (406)
T PRK09295 242 --LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLES 319 (406)
T ss_pred --hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 33322110 0112367899999999999998877656777778888888889999877
Q ss_pred C-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 384 L-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 384 ~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
. |++++.+....+++.+.+ .+.+++++.+.|++.||.++.+...... ....++.+|+|.+.+|| ++|+++
T Consensus 320 ~~~~~~~~~~~~~~iv~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~ 393 (406)
T PRK09295 320 VPDLTLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDR 393 (406)
T ss_pred CCCEEEeCCCCCceEEEEEE--CCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHH
Confidence 4 788876422234444444 3456788888999999999654211000 00124679999998876 899999
Q ss_pred HHHHHHHHHH
Q 010008 460 IADFIHEGVE 469 (520)
Q Consensus 460 la~~i~~~l~ 469 (520)
+++.|+++..
T Consensus 394 l~~~l~~i~~ 403 (406)
T PRK09295 394 LVAGLQRIHR 403 (406)
T ss_pred HHHHHHHHHH
Confidence 9999988643
No 19
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=5.6e-27 Score=246.57 Aligned_cols=344 Identities=19% Similarity=0.187 Sum_probs=241.5
Q ss_pred cceEec-CCCCChHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 010008 95 SLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P 170 (520)
Q Consensus 95 ~i~Lia-sen~~~~~V~ea~~s~l~~~y~~G~p~~r-yy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs-~ 170 (520)
.+.|.. +..++|+.|.+++...+.+.+ +.|... ++.+....+.++ .+++.+++++|++ ++ +|..++|+ +
T Consensus 19 ~~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~----~v~~~~g~t~ 91 (403)
T TIGR01979 19 LVYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE----EIVFTRGTTE 91 (403)
T ss_pred eEEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC----eEEEeCCHHH
Confidence 466754 556889999999988876654 333221 222223333444 5678899999998 44 34456665 8
Q ss_pred HHHHHHHhh----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 171 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 171 A~~~~l~al----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
++..++.++ ++|||+|++.+++|.+++..+. ......|. +++.++++ +++.+|++++++.+++ +|++|
T Consensus 92 ~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~i~~-~~~lv 163 (403)
T TIGR01979 92 SINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGA--TLKFIPLD-DDGTLDLDDLEKLLTE-KTKLV 163 (403)
T ss_pred HHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCc--EEEEEecC-CCCCCCHHHHHHHhcc-CCeEE
Confidence 888777764 6899999999988776532211 11223454 55556666 5688999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcc
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 323 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 323 (520)
+++.++|++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||++ ||.| |+++.++
T Consensus 164 ~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~g~l~~~~---- 235 (403)
T TIGR01979 164 AITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQAL---DCDFYVFSGHKMY-GPTGIGVLYGKE---- 235 (403)
T ss_pred EEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCcccc---CCCEEEEeccccc-CCCCceEEEEch----
Confidence 998777765 789999999999999999999999877653322111 5899999999975 7877 9999887
Q ss_pred hhhHHHhhcccC--------------------CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 324 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 324 ~~~l~~~i~~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
++.+.+.... .....|+++...++++..+++.+...+.+...+++.+.++.+.+.|++
T Consensus 236 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 313 (403)
T TIGR01979 236 --ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE 313 (403)
T ss_pred --HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 4444332110 011247888888888888888776556677888888889999999987
Q ss_pred C-CCEEecCCC---CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHH
Q 010008 384 L-GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKE 456 (520)
Q Consensus 384 ~-G~~v~~~gt---~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d 456 (520)
. |++++.+.. ..+++.+.+. +.++.++.+.|++.||.++.+...... ....++++||+++.+++ ++|
T Consensus 314 ~~g~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~d 387 (403)
T TIGR01979 314 IPGLRIYGPRDAEDRGGIISFNVE--GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EED 387 (403)
T ss_pred CCCEEEeCCCCccccCceEEEEeC--CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHH
Confidence 4 888876421 1345555553 356778889999999999653210000 00125789999887765 899
Q ss_pred HHHHHHHHHHHHH
Q 010008 457 FVAIADFIHEGVE 469 (520)
Q Consensus 457 ~~~la~~i~~~l~ 469 (520)
+++++++|+++++
T Consensus 388 i~~l~~~l~~~~~ 400 (403)
T TIGR01979 388 IDALVEALKKVRK 400 (403)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988665
No 20
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=9.7e-27 Score=242.15 Aligned_cols=335 Identities=19% Similarity=0.174 Sum_probs=234.9
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCCh-HHHHHHHH
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG-SPANFEVY 176 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ry-y~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sG-s~A~~~~l 176 (520)
.+.+++|+.+.+++...+...+ ++|.... ..+....+.+ ..+++++++++|++ ++ +|..++| ++|+..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~----~v~~~~g~t~a~~~~~ 78 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAY-EAAREKVARFINAPSPD----EIIFTRNTTEAINLVA 78 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHH-HHHHHHHHHHhCCCCCC----eEEEeCCHHHHHHHHH
Confidence 3667899999999998886543 3443211 2222333333 35668899999998 43 3444454 58999999
Q ss_pred HhhCC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 010008 177 TAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 253 (520)
Q Consensus 177 ~all~---pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 253 (520)
.++.. |||+|++.+++|.+++.... ......|. +++.++++ +++.+|++++++.+.+ ++++|+++.++|
T Consensus 79 ~~l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~ 150 (373)
T cd06453 79 YGLGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGA--KLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSN 150 (373)
T ss_pred HHhhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCc--EEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCccc
Confidence 99877 99999999988776432111 01123454 55555565 4678999999999987 899999988877
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhh
Q 010008 254 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 254 p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i 331 (520)
++ ..|+++|.++|+++|++|++|++|+.|....+... .++|++++|+||++.+++.|++++++ ++.+.+
T Consensus 151 ~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~~~~g~g~~~~~~------~~~~~~ 221 (373)
T cd06453 151 VLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQD---LGCDFLAFSGHKMLGPTGIGVLYGKE------ELLEEM 221 (373)
T ss_pred ccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccc---cCCCEEEeccccccCCCCcEEEEEch------HHhhcC
Confidence 65 77999999999999999999999887765322111 16899999999999876669999987 444444
Q ss_pred cccCC--------------------CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEec
Q 010008 332 NNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 390 (520)
Q Consensus 332 ~~~~~--------------------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~ 390 (520)
..... ....|+++...+.++..+++.+...+.++..++..++++++.+.|++. |++++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 32110 011357777788888888888776677888888889999999999885 788874
Q ss_pred CC-CCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 391 GG-SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 391 ~g-t~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+. ...+++.+.+. +++..++.+.|.+.||.+..+...... ....++.||+++..++| ++|++++++.|
T Consensus 302 ~~~~~~~~~~~~~~--~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLE--GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEEC--CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence 32 23445555553 457788888999999998643211000 01125689999887665 89999998764
No 21
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=1.6e-26 Score=242.58 Aligned_cols=337 Identities=20% Similarity=0.213 Sum_probs=229.0
Q ss_pred ceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHH
Q 010008 96 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 173 (520)
Q Consensus 96 i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~ 173 (520)
+.|. ++..++|+.|++++...+...+. .++..|.. .....++.+.+++.+++++|++++ +|..++|+ +++.
T Consensus 19 ~yl~~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~ 91 (397)
T TIGR01976 19 VFFDNPAGTQIPQSVADAVSAALTRSNA--NRGGAYES-SRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTF 91 (397)
T ss_pred EEecCCccCCCCHHHHHHHHHHHHhcCC--CCCCCchH-HHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHH
Confidence 5664 46678999999999888764321 12212211 122223333566889999999865 34445555 7777
Q ss_pred HHHHhh---CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 174 EVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 174 ~~l~al---l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
.++.++ ++|||+|++.+++|.+++.... ......|. +++.++++++++.+|++++++.+++ ++++|++++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~ 164 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWL----QAAERAGA--KVKWARVDEATGELHPDDLASLLSP-RTRLVAVTA 164 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHH----HHHHhcCC--EEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeC
Confidence 666654 7899999999988765532110 11233454 5556666654688999999999987 899999988
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHH
Q 010008 251 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~ 328 (520)
++|++ ..|+++|.++|+++|+++++|++|+.|....+... -++|++++|+||++ ||+.|++++++ ++.
T Consensus 165 ~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~~G~l~~~~------~~~ 234 (397)
T TIGR01976 165 ASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQA---TGADFLTCSAYKFF-GPHMGILWGRP------ELL 234 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHH---cCCCEEEEechhhc-CCceEEEEEcH------HHH
Confidence 87775 78999999999999999999999976643222111 16899999999997 78899999987 555
Q ss_pred HhhcccCC---------CCCCCCChHHHHHHHHHHHHHhcCch--------------hHHHHHHHHHHHHHHHHHHHHC-
Q 010008 329 SAINNAVF---------PGLQGGPHNHTIGGLAVCLKHAQSPE--------------FKVYQNKVVSNCRALASRLVEL- 384 (520)
Q Consensus 329 ~~i~~~~~---------p~~~g~p~~~~iaala~al~~~~~~~--------------~~~~~~~i~~na~~l~~~L~~~- 384 (520)
+.+..... ....|+++...++++..|++.+...+ ++...++..+.++++.+.|.+.
T Consensus 235 ~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~ 314 (397)
T TIGR01976 235 MNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLP 314 (397)
T ss_pred hhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44432211 11257888888888888887664332 3445566666777888888775
Q ss_pred CCEEecC---CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCC--------CCCCCCCCCCEEEEccCCccccCCC
Q 010008 385 GYKLVSG---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV--------PGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 385 G~~v~~~---gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~--------Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
+++++.+ ....+++.+.+. +.+..++.+.|++.||.++.+.. |+. +...+.||||.+.++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~--~~~~~~iRis~~~~~t---- 386 (397)
T TIGR01976 315 GVTLYGVARLAARVPTVSFTVH--GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGL--NDEGGVVRVGLAHYNT---- 386 (397)
T ss_pred CEEEeCCCCccCCCceEEEEeC--CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCC--CCCCCeEEEEeeccCC----
Confidence 4888754 123445555443 45677888999999999975421 111 1134689999987765
Q ss_pred HHHHHHHHHHH
Q 010008 454 EKEFVAIADFI 464 (520)
Q Consensus 454 ~~d~~~la~~i 464 (520)
++|++++++.|
T Consensus 387 ~~di~~l~~~l 397 (397)
T TIGR01976 387 AEEVDRLLEAL 397 (397)
T ss_pred HHHHHHHHHhC
Confidence 89999998764
No 22
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.2e-26 Score=245.72 Aligned_cols=346 Identities=17% Similarity=0.130 Sum_probs=242.2
Q ss_pred cceEec-CCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-H
Q 010008 95 SLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-P 170 (520)
Q Consensus 95 ~i~Lia-sen~~~~~V~ea~~s~l~~~y~~G~p~~-ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs-~ 170 (520)
.+.|.. +..++|+.|++++...+...+. .+.. .++.+.+..+.++ .+++.+++++|++ ++ +|..++|+ +
T Consensus 33 ~iyLd~a~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQKPAAVLDALQDYYEEYNS--NVHRGIHALSAKATDAYE-LARKKVAAFINASTSR----EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccCCCHHHHHHHHHHHHhcCC--CCCCccchHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEeCCHHH
Confidence 466653 5567899999999888765442 2221 1233334444454 5678999999996 34 34455555 8
Q ss_pred HHHHHHHh----hCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 171 ANFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 171 A~~~~l~a----ll~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
++..++.+ .++|||+|++.+++|.+.+.... ......|. +++.+++++ ++.+|++++++.+++ ++++|
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~a~~~g~--~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv 177 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQ----LVAQKTGA--VLKFVGLTP-DEVLDVEQLKELLSE-KTKLV 177 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHH----HHHHHcCC--EEEEEecCC-CCCcCHHHHHHHhcc-CceEE
Confidence 88888775 36899999999988865432111 11123454 555666653 456999999999987 89999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcc
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 323 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 323 (520)
+++.++|++ ..|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+|| +.||.| |++++++
T Consensus 178 ~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~---~~d~~~~s~~K-~~gp~G~G~l~~~~---- 249 (424)
T PLN02855 178 ATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTL---GADFLVASSHK-MCGPTGIGFLWGKS---- 249 (424)
T ss_pred EEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhc---CCCEEEeeccc-ccCCCccEEEEEch----
Confidence 999887765 889999999999999999999999877653322111 58999999999 568887 9999987
Q ss_pred hhhHHHhhccc--------------------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 324 GVELESAINNA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 324 ~~~l~~~i~~~--------------------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
++.+++... ......|+++...+++++.+++.+.+.+.++..+++.+.++.+.+.|.+
T Consensus 250 --~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 327 (424)
T PLN02855 250 --DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS 327 (424)
T ss_pred --hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 343333211 0012367899999999999998776667778888888889999999877
Q ss_pred C-CCEEecCCC-----CCeeEEEEecCCCCCHHHHHHHHhhc-CeEEcCCCCC---CCCCCCCCCEEEEccCCccccCCC
Q 010008 384 L-GYKLVSGGS-----DNHLVLVDLRPMGIDGARVEKILDMA-SITLNKNSVP---GDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 384 ~-G~~v~~~gt-----~~~~~~vd~~~~g~~~~~~~~~L~~~-gI~v~~~~~P---g~~~~~~~~giRig~~~~tt~g~~ 453 (520)
. |++++.+.. ...++.+.+ .+++..++.+.|.+. ||.++.+..- ....-..++.||+|.+.++|
T Consensus 328 ~~g~~i~~~~~~~~~~r~~~v~~~~--~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt---- 401 (424)
T PLN02855 328 VPGVRIYGPKPSEGVGRAALCAFNV--EGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT---- 401 (424)
T ss_pred CCCEEEeCCCcccccCcccEEEEEE--CCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----
Confidence 4 888886421 123444444 345678888889776 9999753210 00000113679999988876
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 454 ~~d~~~la~~i~~~l~~~ 471 (520)
++|++++++.|+++++..
T Consensus 402 ~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 402 KEEVDAFIHALKDTIAFF 419 (424)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999988654
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=3.4e-26 Score=238.76 Aligned_cols=341 Identities=18% Similarity=0.221 Sum_probs=235.2
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 179 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al 179 (520)
++..++|+.|++++...+.+. .|+|+..+..+..+.+.++ .+++++++++|++++++ +...+|++++.+++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~i---~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPDEI---IFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCeE---EEeCcHHHHHHHHHHHH
Confidence 456688999999999888753 3666643222334444444 57789999999987532 23345569998888776
Q ss_pred C---CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 010008 180 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 255 (520)
Q Consensus 180 l---~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 255 (520)
+ .+||+|++.+.+|.+...... .+...|. +++.++++ +++.+|++++++.+++ +++++++..++|++
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLCQ-----HLEKQGY--KVTYLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNETG 150 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHHH-----HHHHcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence 3 467899988877755432211 1122354 55556665 4578999999999987 89999888777765
Q ss_pred -CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc-
Q 010008 256 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN- 332 (520)
Q Consensus 256 -~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~- 332 (520)
..|+++|.++|+++|+++++|++|+.|....++... ++|++++|+|| +.||.| |+++.+++. .+...+.
T Consensus 151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~---~~D~~~~s~~K-~~gp~G~g~l~v~~~~----~~~p~~~g 222 (379)
T TIGR03402 151 TIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEM---NIDMLSLSGHK-LHGPKGVGALYIRKGT----RFRPLLRG 222 (379)
T ss_pred ecccHHHHHHHHHHcCCEEEEECcccccccccCcccC---CCCEEEEcHHH-cCCCCceEEEEECCCC----CCCCcccC
Confidence 889999999999999999999999887654332221 68999999999 778998 999888741 0100000
Q ss_pred -ccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecCCCC--CeeEEEEecCCCC
Q 010008 333 -NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSD--NHLVLVDLRPMGI 407 (520)
Q Consensus 333 -~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~gt~--~~~~~vd~~~~g~ 407 (520)
........|+++...+.++..+++.... .+++..++..++++.+.+.|.+ .++.+..+... .+.+.+.+ .+.
T Consensus 223 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 299 (379)
T TIGR03402 223 GHQERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYI 299 (379)
T ss_pred CccCCCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCC
Confidence 0000112578899999999989887653 5566667788888888888874 47777653211 12333333 345
Q ss_pred CHHHHHHHHhhcCeEEcCCC--CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 408 DGARVEKILDMASITLNKNS--VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 408 ~~~~~~~~L~~~gI~v~~~~--~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
++.++...|++.||.++.+. .++... ...++.||+|++.+|| ++|++++++.|+++++.
T Consensus 300 ~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~l~~~~~~ 372 (379)
T TIGR03402 300 EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEVLPPIIAR 372 (379)
T ss_pred CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Confidence 77888889999999997542 111000 1124789999998876 89999999999987764
No 24
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=4.3e-26 Score=237.48 Aligned_cols=335 Identities=20% Similarity=0.231 Sum_probs=230.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~-ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~-sGs~A~~~~l~all~ 181 (520)
++|+.|++++.+.+.+.. +.++. .|..+....+.++ .+++++++++|++..+ +|..+ ++++++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 478899999988775432 11221 1111111122222 4558899999987531 34445 455899999999999
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCH
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 259 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~ 259 (520)
+||+|++.+++|+++..... ......|. +++.++++ +++.+|++++++.+++ +|++|+++.++|++ ..|+
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999999877755421110 01112244 55666665 3578999999999977 89999998887775 7899
Q ss_pred HHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhccc----
Q 010008 260 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---- 334 (520)
Q Consensus 260 ~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~---- 334 (520)
++|.++|+++|+++++|++|+.|....+... .++|++++|+|||+.||.| |+++.++.. ....+...
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~---~~~D~~~~s~~K~l~~p~g~g~l~~~~~~-----~~~~~~~~~~~~ 228 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTE---LAIDMLAFTGHKGLLGPQGTGGLYIREGI-----KLKPLKSGGTGS 228 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchh---cCCCEEEecccccccCCCCceEEEEcCCc-----CcCceecCCCcc
Confidence 9999999999999999999998876444322 2699999999999999988 777766641 10100000
Q ss_pred -----------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCC-C--CCeeEE
Q 010008 335 -----------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGG-S--DNHLVL 399 (520)
Q Consensus 335 -----------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~g-t--~~~~~~ 399 (520)
......|+++...++++..+++.+.+.+.+...++..++++++.+.|.+ .|++++.+. . ...++.
T Consensus 229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~ 308 (376)
T TIGR01977 229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS 308 (376)
T ss_pred ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence 0011246788888999998999887777778888899999999999986 678877531 1 123344
Q ss_pred EEecCCCCCHHHHHHHHhhc-CeEEcCCCCCCC-----CCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMA-SITLNKNSVPGD-----KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~-gI~v~~~~~Pg~-----~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
+.+ .++++.++.+.|.+. ||.+..+..-.. .+....+.||+++..++| ++|++++++.|++
T Consensus 309 ~~~--~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t----~~dv~~~~~~l~~ 375 (376)
T TIGR01977 309 FTV--EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNT----EEEIEKLLEALSE 375 (376)
T ss_pred EEE--CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCC----HHHHHHHHHHHhh
Confidence 444 456788898989876 999975421000 012245789999887655 8999999999875
No 25
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=4.6e-26 Score=225.62 Aligned_cols=334 Identities=20% Similarity=0.246 Sum_probs=240.4
Q ss_pred ccceEecCC--CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChH-
Q 010008 94 KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Liase--n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~-~~~~~~V~~~sGs- 169 (520)
+.|.|-.++ -.++|.|++|+...+.+. ..|||. .. +.+-+..++|.++.++.+. .+| |..+.|-
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~----~~----~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPY----GS----DELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCC----CC----HHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence 556776665 358999999999988766 348873 21 2333455689999998873 344 3334555
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC--CCCCHHHHHHHhhhcCCcEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~--~~iD~d~le~~i~~~~pklIi 247 (520)
.++..++.++.+|||.|++..|.|... .+.+...|+ +++..|+..++ +.+|+++||+.+...++|+.+
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF--------~~~i~~n~R--~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~i 163 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPF--------YNAIKLNGR--KVIENPLVEDDGRYEIDFDALEKAFVDERVKLFI 163 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHH--------HHHHhhcCc--EEEeccccccCCcEEecHHHHHHHHhcCCccEEE
Confidence 999999999999999999999876432 135666777 66666665444 577999999999887789999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-----ccc--EEEeccCccc--CCCCce
Q 010008 248 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 248 ~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-----~aD--iv~~S~hK~l--~GprgG 313 (520)
+++|+||+ ++ ++.+|.+||.+||+.||+|+.|. .++..|..+.|+. .+| ++++|.+|++ +|.+.+
T Consensus 164 LCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a 242 (388)
T COG1168 164 LCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCA 242 (388)
T ss_pred EeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhhe
Confidence 99999996 44 57888899999999999999984 6777764333332 345 7778899986 788888
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecC
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSG 391 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~ 391 (520)
.++..++ ++..+..+..-...+++|+...+.|..+|.++- .++.++..+.+.+|++++.+.|.+ .++++..+
T Consensus 243 ~~Ii~n~-----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p 316 (388)
T COG1168 243 YIIISNR-----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEP 316 (388)
T ss_pred eEEecCH-----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecC
Confidence 7777664 554443332223346778887887777788764 345688889999999999999988 48998765
Q ss_pred CCCCeeEEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
..+++.|+|++..+++..++++ +|++++|.++.+...| +.+.+.+|+-. .|+|...++.+++++.
T Consensus 317 -~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG---~~g~gf~RlN~--acpr~~L~eal~ri~~ 382 (388)
T COG1168 317 -QGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFG---EEGSGFVRLNF--ACPRAILEEALERLKR 382 (388)
T ss_pred -CCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccC---cCCCceEEEec--CCCHHHHHHHHHHHHH
Confidence 2468899999999998766555 5678999998765443 34567899853 3334333444444443
No 26
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=8.4e-26 Score=237.44 Aligned_cols=333 Identities=16% Similarity=0.144 Sum_probs=239.5
Q ss_pred ceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 010008 96 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 175 (520)
Q Consensus 96 i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~ 175 (520)
+.++++...+++.|++++...+.+.. ...+. ++-+.++++++++||++.++ ..+.+++|++++.++
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~~-~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~a 76 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAFP-ALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWESA 76 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHHH-HHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHHH
Confidence 45677888899999999976543221 12233 34446778999999997643 245667788999999
Q ss_pred HHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC
Q 010008 176 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASA 252 (520)
Q Consensus 176 l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~~~s~ 252 (520)
+..+++|||+|++.++.+.+. .+. ......|. +++.++.+. +..+|++++++.+++ .++|+|+++++.
T Consensus 77 ~~~~~~~Gd~Vlv~~~~~~~~---~~~---~~~~~~g~--~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~ 147 (401)
T PLN02409 77 LTNTLSPGDKVVSFRIGQFSL---LWI---DQMQRLNF--DVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVHNE 147 (401)
T ss_pred HHhcCCCCCEEEEeCCCchhH---HHH---HHHHHcCC--ceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEeec
Confidence 999999999999998755332 110 12233454 555555553 345899999999986 378999998776
Q ss_pred CCC--CCCHHHHHHH--HHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhH
Q 010008 253 YPR--DFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 327 (520)
Q Consensus 253 ~p~--~~d~~~i~~i--a~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l 327 (520)
|++ ..|+++|.++ |+++|+++++|++|+.|....+.... ++|++++|+||||.||.| |+++.++ +.
T Consensus 148 ~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~---~~D~~~~s~~K~l~~P~G~G~l~~~~------~~ 218 (401)
T PLN02409 148 TSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEW---GVDVALTGSQKALSLPTGLGIVCASP------KA 218 (401)
T ss_pred ccccccCCHHHHHHHHhhhccCcEEEEEcccccCCcccccccc---CccEEEEcCccccCcCCCcceeEECH------HH
Confidence 665 8899999999 99999999999998877553322111 589999999999999877 9999887 44
Q ss_pred HHhhcccC----C-----------CC--CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec
Q 010008 328 ESAINNAV----F-----------PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 390 (520)
Q Consensus 328 ~~~i~~~~----~-----------p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~ 390 (520)
.+++.... + .+ ..++|+.+.+.++..|++.+.+.+++...++..+.++++.+.|.+.|++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~ 298 (401)
T PLN02409 219 LEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCT 298 (401)
T ss_pred HHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 44433210 0 00 1347888889999999998777778888899999999999999888999876
Q ss_pred CCCC--C-eeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 391 GGSD--N-HLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 391 ~gt~--~-~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
+... . .+.++.+ +.+++..++.+.| ++.||.+..+. ++.....||||+...++ ++|+..+.+++.+
T Consensus 299 ~~~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~-----~~~~~~~~Rig~~g~~~----~~~~~~~~~~~~~ 368 (401)
T PLN02409 299 KKPEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGL-----NKVAGKVFRIGHLGNVN----ELQLLGALAGVEM 368 (401)
T ss_pred CChhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCC-----CcccCCEEEEcCCCCCC----HHHHHHHHHHHHH
Confidence 4211 1 2233433 3567777776554 68899995432 23345789999987654 8999999999999
Q ss_pred HHHH
Q 010008 467 GVEI 470 (520)
Q Consensus 467 ~l~~ 470 (520)
++..
T Consensus 369 ~l~~ 372 (401)
T PLN02409 369 VLKD 372 (401)
T ss_pred HHHH
Confidence 8864
No 27
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=4.5e-26 Score=237.99 Aligned_cols=340 Identities=14% Similarity=0.143 Sum_probs=234.6
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHh
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTA 178 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~a 178 (520)
++..++|+.|++++...+...+ +.|+..+..+....+.++ .+++.+++++|++++ +|..++|+ +++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 4556889999999988776543 334434444444444444 577899999999875 45556664 898888877
Q ss_pred hC----CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 010008 179 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 254 (520)
Q Consensus 179 ll----~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 254 (520)
++ ++||+|++.+.+|.+..... ..+...|. ++..++++ +++.+|++++++.+++ ++++|++++++||
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGY--TVTEIPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCC--EEEEEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 67999999887765442211 11223454 55555565 4578999999999977 8999999988887
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhh
Q 010008 255 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 255 ~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i 331 (520)
+ ..|+++|.++|+++|+++++|++|..|....+.... ++|++++|+||++ ||.| |+++.+++. .+ ..+
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~---~~d~~~~s~~K~~-gp~G~G~l~~~~~~----~~-~~~ 221 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEM---GIDSLSVSAHKIY-GPKGVGAVYINPQV----RW-KPV 221 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccC---CCCEEEecHHhcC-CCCcEEEEEEcCCC----CC-CCc
Confidence 6 889999999999999999999998877543332221 5899999999965 6877 999888741 01 111
Q ss_pred cc---cCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe-e-EEEEecCCC
Q 010008 332 NN---AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH-L-VLVDLRPMG 406 (520)
Q Consensus 332 ~~---~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~-~-~~vd~~~~g 406 (520)
.. .......|+++...++++..+++... .+.++..+++.++++++.+.|++.|+++...+..++ + .++.+...+
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~ 300 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG 300 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCC
Confidence 00 00112356788888888888888764 355777888999999999999988876653321121 1 123333345
Q ss_pred CCHHHHHHHHhhcCeEEcCCCC-------CCC-------CCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 407 IDGARVEKILDMASITLNKNSV-------PGD-------KSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 407 ~~~~~~~~~L~~~gI~v~~~~~-------Pg~-------~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++++++...|++.||.++.+.. |.. ..+...+.+|||+..++| ++|++++.+.|.++++
T Consensus 301 ~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 301 IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIHALETIGN 373 (381)
T ss_pred CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHHHHHHHHH
Confidence 5677777788899999975421 100 001124689999887665 8999999999998765
No 28
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=1.2e-25 Score=237.00 Aligned_cols=359 Identities=13% Similarity=0.094 Sum_probs=239.6
Q ss_pred hhhccccChHHHHHHHHHHHHhhccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 010008 71 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 148 (520)
Q Consensus 71 ~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~ 148 (520)
.+++....++.+..+.+... ..+.|+|..++. .+++.+.+++...+.+.. ..|+. .....++++...+++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~Lr~aia~~~ 104 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR------GFGVPELNSAIAERF 104 (413)
T ss_pred hHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCCCHHHHHHHHHHH
Confidence 45566666666655544332 236788876653 357888999887776421 23332 122345666666788
Q ss_pred HHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC
Q 010008 149 LAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 227 (520)
Q Consensus 149 ~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~ 227 (520)
.+.+|.+.+. ..+|.+|+|+ +|+..++.++++|||+|++++|.|..+. ..+...|. +++.++++++++
T Consensus 105 ~~~~g~~~~~-~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~ 173 (413)
T PLN00175 105 KKDTGLVVDP-EKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE--------ATLSMAGA--KIKTVTLRPPDF 173 (413)
T ss_pred HHHhCCCCCC-CCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEEECCcccC
Confidence 8888865321 0146668887 8999999999999999999998775542 12344565 666777765568
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCC--CCc---cc
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY---CD 297 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p--~~~---aD 297 (520)
.+|+++|++.+.+ ++|+|++++++||+ .. ++++|.++|+++|+++|+|+++ ..+.+.+.+.+. +.+ ..
T Consensus 174 ~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 174 AVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred CCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCcE
Confidence 8999999999987 89999999999997 44 4778899999999999999984 455543322111 111 23
Q ss_pred EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 298 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 298 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
|++.|++|++ +|+|.||+++++ ++.+.+.........+.+...+.++ +.+|+.. ...+++..+++.++++
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~Q~a~-~~~l~~~-~~~~~~~~~~~~~~~~ 323 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPP------HLTWGVRQAHSFLTFATATPMQWAA-VAALRAP-ESYYEELKRDYSAKKD 323 (413)
T ss_pred EEEecchhhccCcchheeeeEeCH------HHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCC-HHHHHHHHHHHHHHHH
Confidence 7889999986 789999999987 5666554432111223333434333 3455431 1234677888899999
Q ss_pred HHHHHHHHCCCEEecCCCCCeeEEEEecCCCC-CHHHHH-HHHhhcCeEEcCCCCCCCC-C---CCCCCEEEEccCCccc
Q 010008 376 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-DGARVE-KILDMASITLNKNSVPGDK-S---ALVPGGIRIGSPAMTT 449 (520)
Q Consensus 376 ~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~-~~~~~~-~~L~~~gI~v~~~~~Pg~~-~---~~~~~giRig~~~~tt 449 (520)
.+.+.|.+.|+.+..+ ..++++|+++.+.++ +..++. .++++.||.+ .||.. . ....++|||++.
T Consensus 324 ~l~~~L~~~g~~~~~p-~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v----~pg~~F~~~~~~~~~~iRls~~---- 394 (413)
T PLN00175 324 ILVEGLKEVGFKVYPS-SGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAA----IPPSVFYLNPEDGKNLVRFAFC---- 394 (413)
T ss_pred HHHHHHHHCCCeecCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEE----eCchHhCCCCCCCCCEEEEEEc----
Confidence 9999999888887654 335677888754444 344554 4557889999 45532 1 123468999864
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 010008 450 RGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 450 ~g~~~~d~~~la~~i~~~l~ 469 (520)
..++++++.++.|.+.++
T Consensus 395 --~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 395 --KDEETLRAAVERMKTKLK 412 (413)
T ss_pred --CCHHHHHHHHHHHHHHHh
Confidence 247889988888887664
No 29
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.95 E-value=7.8e-26 Score=237.37 Aligned_cols=312 Identities=20% Similarity=0.267 Sum_probs=223.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccc
Q 010008 131 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 210 (520)
Q Consensus 131 y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~ 210 (520)
|++.....++| +.++++||.+. .|.+++|+.|+..++.++++|||+|+ +++.+..+ ...+..
T Consensus 49 Y~~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~--------~~~i~~ 110 (431)
T cd00617 49 YAGSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDTT--------RGHIEA 110 (431)
T ss_pred cCCCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccch--------HHHHHh
Confidence 44444566777 56778899875 25567888999999999999999884 55433222 123455
Q ss_pred ccceEEEEEcccCCC---------CCCCCHHHHHHHhhhc---CCcEEEEcCCCCCC---CC---CHHHHHHHHHHhCCE
Q 010008 211 TSIYFESMPYRLDES---------TGLVDYDMLEKTAILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGAL 272 (520)
Q Consensus 211 ~g~~~~~v~~~~d~~---------~~~iD~d~le~~i~~~---~pklIi~~~s~~p~---~~---d~~~i~~ia~~~g~~ 272 (520)
.|. +++.++++++ ++.+|+++|++++++. ++++|+++.|+||+ .. ++++|+++|++||++
T Consensus 111 ~Ga--~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~ 188 (431)
T cd00617 111 NGA--VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP 188 (431)
T ss_pred CCC--EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 665 6777766532 3569999999999863 37889998888863 44 466889999999999
Q ss_pred EEEechhhccccc------ccccCCC--------CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccC--C
Q 010008 273 LMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--F 336 (520)
Q Consensus 273 li~D~Ah~~gli~------~~~~~~p--------~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~--~ 336 (520)
||.|+||..+-.. .+....+ +.++|.+++|+||.+.++-||+++++++ ++.++++... +
T Consensus 189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~ 263 (431)
T cd00617 189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLY 263 (431)
T ss_pred EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhcccc
Confidence 9999998765221 1222222 2378999999999988888999999984 5777665422 2
Q ss_pred CC--CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC-------CC
Q 010008 337 PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GI 407 (520)
Q Consensus 337 p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~-------g~ 407 (520)
.+ ..|+.+...++|++++|++..+ .++.++..+++++|.+.|.+.|++++.+ ...|++++|+... +.
T Consensus 264 ~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~P-~Ggh~v~~d~~~~~~~~~~~~~ 339 (431)
T cd00617 264 EGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVEP-AGGHAVFIDAREFLPHIPQEQF 339 (431)
T ss_pred CCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccCC-CcceEEEEEhHHhcCCCCcccC
Confidence 22 2467777788888888877433 3556667778899999999999998875 3569999998642 12
Q ss_pred CHHH-HHHHHhhcCeEEc-CCCC--CCCCC-----CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 408 DGAR-VEKILDMASITLN-KNSV--PGDKS-----ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 408 ~~~~-~~~~L~~~gI~v~-~~~~--Pg~~~-----~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
++.. +.+++++.||.+. .+++ +.|.. ......+|+++| +|++|.++|+++++.|.+++++...+
T Consensus 340 ~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~~~~~~ 412 (431)
T cd00617 340 PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYERREDI 412 (431)
T ss_pred cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHhhHhhC
Confidence 3444 5578899999964 3321 33321 112368999988 78999999999999999999886544
No 30
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.95 E-value=5.9e-26 Score=236.32 Aligned_cols=332 Identities=21% Similarity=0.232 Sum_probs=231.7
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCC-CCCceeeecCChHHHHHHHHHh
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTA 178 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~-~~~~~~V~~~sGs~A~~~~l~a 178 (520)
++..++|+.|++++...+.+.+..+..+. +..+.++.+.++ .+++.+++++|+++ ++ .+...+++.++..++.+
T Consensus 6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~~---v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 6 AGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDEE---VVFTSNGTEALNAVASS 80 (371)
T ss_dssp SSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTEE---EEEESSHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCccccc---cccccccchhhhhhhhc
Confidence 56678999999999998887765432222 233444455555 67899999999998 42 23345566899999999
Q ss_pred h---CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 010008 179 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 253 (520)
Q Consensus 179 l---l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~--~ 253 (520)
+ +++||+|++.+.+|.+...... ......|. ++..++.+ .++.+|++++++.+++ ++++|++.... .
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~i~~~-~~~~~~~~~~~~~l~~-~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWE----EIAKRKGA--EVRVIPAD-PGGSLDLEDLEEALNP-DTRLVSISHVENST 152 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHH----HHHHHTTE--EEEEEEEG-TTSSCSHHHHHHHHHT-TESEEEEESBETTT
T ss_pred cccccccccccccccccccccccccc----cccccchh--hhcccccc-ccchhhhhhhhhhhcc-ccceEEeecccccc
Confidence 9 8999999999887765531111 01123454 44444554 4578999999999986 99999988543 3
Q ss_pred CCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc
Q 010008 254 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 254 p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~ 332 (520)
+...|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|+|| |.||+| |+++.++ +..++++
T Consensus 153 G~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~---~~D~~~~s~~K-l~gp~G~g~l~v~~------~~~~~~~ 222 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDEL---GADFLVFSSHK-LGGPPGLGFLYVRP------EAIERLR 222 (371)
T ss_dssp TBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTT---TESEEEEESTS-TTSSSTEEEEEEEH------HHHHHHH
T ss_pred cEEeeeceehhhhhccCCceeEechhcccccccccccc---ccceeeecccc-cCCCCchhhheehh------hhhhccc
Confidence 44889999999999999999999999998875443322 69999999999 999998 9999998 3433332
Q ss_pred ccC--------------------CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecC
Q 010008 333 NAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 391 (520)
Q Consensus 333 ~~~--------------------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~ 391 (520)
... .....|+++...+.++..+++.+...+.+...++..+.++++.+.|.+. ++.++.+
T Consensus 223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~ 302 (371)
T PF00266_consen 223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGP 302 (371)
T ss_dssp TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSS
T ss_pred cccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeee
Confidence 211 1123578999999999999998865667888888999999999999885 4555442
Q ss_pred ---CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCC---CCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 392 ---GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 392 ---gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg---~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
...+.++.+.+ .+.++..+.+.|++.||.+..+..-. .......++||+|.+.++| ++|++++
T Consensus 303 ~~~~~~~~i~~~~~--~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l 371 (371)
T PF00266_consen 303 DDEPRRPSIVSFNL--PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL 371 (371)
T ss_dssp SCGGBGTTEEEEEE--TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred cccccccceEEEee--cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence 12234445555 46688999999999999996531000 0000013799999988876 8999875
No 31
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=3e-25 Score=231.92 Aligned_cols=340 Identities=17% Similarity=0.218 Sum_probs=234.0
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChH-HHHHHHHH
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEVYT 177 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~-~~~~~~~~V~~~sGs-~A~~~~l~ 177 (520)
++..++++.|++++...+.+.| +.|+..+..+....+.+++ +++.+.+.+|+ +++ +|.+++|+ +++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 3456788999999998887765 3454333333444556664 45566677887 454 45556666 89988888
Q ss_pred hhC-----CC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 178 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 178 all-----~p-GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
++. ++ +|+|++.+.+|.+...... .+...|. +++.++++ +++.+|++++++.+++ +++++++.++
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGV--EVTYLPIN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCC--EEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 762 56 4789998887765432211 1223354 56666676 4578999999999987 8999999888
Q ss_pred CCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHH
Q 010008 252 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 328 (520)
Q Consensus 252 ~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~ 328 (520)
+||+ ..|+++|.++|+++|+++++|++|..|.+..+... .++|++++|+||+ .||.| |+++.+++. .+.
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~---~~~D~~~~s~~K~-~gp~G~g~l~vr~~~----~~~ 221 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQK---AGVDFLSFSAHKF-HGPKGVGGLYIRKGV----ELT 221 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccc---cCCCEEEEcchhh-CCCCceEEEEECCCC----CCC
Confidence 8876 78999999999999999999999887755332211 1689999999997 57887 999888742 111
Q ss_pred Hhhc--ccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCC--CCeeEEEEec
Q 010008 329 SAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNHLVLVDLR 403 (520)
Q Consensus 329 ~~i~--~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt--~~~~~~vd~~ 403 (520)
..+. ........|+++...+.+++.+++...+ ..+...+++...++++.+.|.+ .|+.++.+.. ..+++.+.+
T Consensus 222 p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~- 299 (382)
T TIGR03403 222 PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISI- 299 (382)
T ss_pred CcccCCCCCCCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEe-
Confidence 1110 0001112577888888888888876542 3466667888888889999977 5788876421 123445554
Q ss_pred CCCCCHHHHHHHHhhcCeEEcCCC-C-CCCC------------CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 404 PMGIDGARVEKILDMASITLNKNS-V-PGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 404 ~~g~~~~~~~~~L~~~gI~v~~~~-~-Pg~~------------~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.++++..+...|.+.||.++.++ + ++.. .....+.||+|++.+|| ++|++++++.|+++++
T Consensus 300 -~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did~~~~~l~~~~~ 374 (382)
T TIGR03403 300 -KGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEIDYTIEVFKKAVQ 374 (382)
T ss_pred -CCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHHHHHHHHHHHHH
Confidence 35678888888999999998642 1 0100 01123679999998776 8999999999998876
Q ss_pred H
Q 010008 470 I 470 (520)
Q Consensus 470 ~ 470 (520)
.
T Consensus 375 ~ 375 (382)
T TIGR03403 375 R 375 (382)
T ss_pred H
Confidence 4
No 32
>PLN02651 cysteine desulfurase
Probab=99.95 E-value=1.3e-25 Score=233.07 Aligned_cols=324 Identities=17% Similarity=0.208 Sum_probs=223.4
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 178 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~-ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~a 178 (520)
++..++|+.|++++...+.+.+ +.|+. .+..+.+..+.++ .+++++++++|++++++ +...+|++++..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~v---~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPKEI---IFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCeE---EEeCCHHHHHHHHHHH
Confidence 4556889999999998876544 44442 1111233334444 56789999999987532 2234455887776655
Q ss_pred h----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 010008 179 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 254 (520)
Q Consensus 179 l----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p 254 (520)
+ .++||+|++.+.+|.+..... ..+...|. +++.++++ +++.+|++++++++++ +++++++..++|+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSC-----RHLQQEGF--EVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 4 578999999887775532111 01122343 55555665 4678999999999987 8999999877766
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhh
Q 010008 255 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 255 ~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i 331 (520)
+ ..|+++|.++|+++|+++++|++|+.|.+..++... ++|++++|+||| .||.| |+++.+++ ...++
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~---~~D~~~~s~hK~-~gp~G~g~l~v~~~------~~~~l 220 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDL---GVDLMSISGHKI-YGPKGVGALYVRRR------PRVRL 220 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccC---CCCEEEechhhh-CCCCceEEEEEcCC------CCCCC
Confidence 5 889999999999999999999999988765443222 589999999997 68988 99999874 22222
Q ss_pred cccCC------CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecCC-CC---CeeEE
Q 010008 332 NNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGG-SD---NHLVL 399 (520)
Q Consensus 332 ~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~g-t~---~~~~~ 399 (520)
..... ....|+++...++++..|++.+.. +.++..++..+.++++.+.|.+ .|++++.+. .+ .+++.
T Consensus 221 ~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~ 299 (364)
T PLN02651 221 EPLMSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN 299 (364)
T ss_pred CccccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence 22111 123688999999999999988764 4466677788888888888875 388888742 11 23444
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCC--CCC-----C----C---CCCCCEEEEccCCccccCCCHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSV--PGD-----K----S---ALVPGGIRIGSPAMTTRGFSEKEF 457 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~--Pg~-----~----~---~~~~~giRig~~~~tt~g~~~~d~ 457 (520)
+.+ .+++++++.+.|.+ |.++.+.. ++. . + ....+.+|+|+..+|| ++|+
T Consensus 300 ~~~--~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~di 363 (364)
T PLN02651 300 LSF--AYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEV 363 (364)
T ss_pred EEe--CCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHc
Confidence 444 46788888888876 88865431 110 0 0 0124789999998887 5665
No 33
>PRK08960 hypothetical protein; Provisional
Probab=99.94 E-value=9.5e-25 Score=228.56 Aligned_cols=336 Identities=13% Similarity=0.111 Sum_probs=217.7
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sG 168 (520)
.+.|+|..+++. +|+.+++++.+.+.+.. .+|+. ....+++++...+++.+.+|. +++ +|.+++|
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it~G 100 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA------ARGLPALREAIAGFYAQRYGVDVDPE----RILVTPG 100 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC------CCCCHHHHHHHHHHHHHHhCCCCChh----hEEEccC
Confidence 356888887753 68999999988876431 12322 112345555555677766665 444 5667888
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklI 246 (520)
+ +|+..++.++++|||+|++++|+|.++.. .+...|. +++.++++.+ ++.+|++++++++++ +++++
T Consensus 101 ~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i 169 (387)
T PRK08960 101 GSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEG--AAQLVPVGPDSRYQLTPALVERHWNA-DTVGA 169 (387)
T ss_pred cHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--eEEEEecCcccCCCCCHHHHHHHhCc-cceEE
Confidence 7 99999999999999999999998876542 2233455 5555566544 357999999998887 78888
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc-EEEeccCccc--CCCCceEEEe
Q 010008 247 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFF 317 (520)
Q Consensus 247 i~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD-iv~~S~hK~l--~GprgG~I~~ 317 (520)
+++.|+||+ .++ +++|+++|+++|+++++|+++ .++.+.+.....+. ..+ +++.|+||.+ +|.|.||+++
T Consensus 170 ~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~ 248 (387)
T PRK08960 170 LVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVA 248 (387)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEc
Confidence 888899987 555 556777899999999999984 45554332222122 223 6789999986 7889999999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
++ ++.+.+.........+.+...+.++ ..+|............+++.++++.+.+.|++.|+.+......+.+
T Consensus 249 ~~------~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f 321 (387)
T PRK08960 249 PP------AAVPELEKLAQNLYISASTPAQHAA-LACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFY 321 (387)
T ss_pred CH------HHHHHHHHHHhhhccCCCHHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEE
Confidence 87 6666655432222223333333433 2344321112235666778888889999998888765322223566
Q ss_pred EEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCC-C-CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDK-S-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~-~-~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+|+++...+.+..++.+ +|+++||.+. ||.. + ....+++||++.. ..+++++..+.|.+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~ll~~~gi~v~----pg~~f~~~~~~~~iRi~~~~------~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 322 LYADISAFGGDAFAFCRHFLETEHVAFT----PGLDFGRHQAGQHVRFAYTQ------SLPRLQEAVERIARGL 385 (387)
T ss_pred EEEeccccCCCHHHHHHHHHHhCCEEEc----CchHhCCCCCCCeEEEEecC------CHHHHHHHHHHHHHHH
Confidence 78887543345566654 4578999994 4433 1 1124689998652 2456666555555443
No 34
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=8.8e-25 Score=229.08 Aligned_cols=333 Identities=19% Similarity=0.219 Sum_probs=225.4
Q ss_pred ccceEecCC--C-CChHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 94 KSLELIASE--N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liase--n-~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~-~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
+.|++..++ . ..+|.|++++...+.. |..||++.|+..|. +...++| +.+++++|.+. .+..+||+
T Consensus 39 ~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~ 108 (393)
T TIGR01822 39 EVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCF 108 (393)
T ss_pred eEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchH
Confidence 457776554 1 2478999999887754 43488888888774 4444555 67889999864 24457788
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 244 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pk 244 (520)
+|+..++.++++|||+|++.++.|.+... .+...+. ..+.+ ..+|++++++++++. +++
T Consensus 109 ~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~~ 172 (393)
T TIGR01822 109 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARHR 172 (393)
T ss_pred HHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCce
Confidence 99999999999999999999988765431 1222232 22222 247999999988752 677
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhccccccccc---C-CCC-CcccEEEeccCcccCCCCceEEEe
Q 010008 245 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---A-DPF-KYCDVVTTTTHKSLRGPRGGMIFF 317 (520)
Q Consensus 245 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~---~-~p~-~~aDiv~~S~hK~l~GprgG~I~~ 317 (520)
+|+++...+++ ..|+++|+++|+++|++|++|++|..|....... . ..+ ..+|++++|+||+++|||+||+++
T Consensus 173 ~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~ 252 (393)
T TIGR01822 173 LIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTA 252 (393)
T ss_pred EEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEe
Confidence 88877555553 7899999999999999999999997776532110 0 111 257899999999999999999999
Q ss_pred eCCCcchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe
Q 010008 318 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 396 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~ 396 (520)
++ ++.+.+.....+. ..++++...+++...+++... +.++..+++.++++++.+.|.+.|+.+..+ ...
T Consensus 253 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~ 322 (393)
T TIGR01822 253 RK------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA--DHP 322 (393)
T ss_pred CH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCC
Confidence 87 5666654422222 233444444555555666542 345677888999999999998888876532 223
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.+.+.. ..+..++.+.|.+.||.+.....|. .+.....+|++.+..+ +++|++++++.|.++.+
T Consensus 323 ~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~~----t~edi~~~~~~l~~~~~ 388 (393)
T TIGR01822 323 IIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAAH----TEEQLDRAVEAFTRIGR 388 (393)
T ss_pred EEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHHHHHH
Confidence 33333321 1235667777778899986322221 1112356999877554 48999999999988765
No 35
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2e-24 Score=226.97 Aligned_cols=333 Identities=16% Similarity=0.137 Sum_probs=220.4
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..+++. +++.+.+++...+.+....+|+. .| ...+.+...+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus 33 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~~ 104 (399)
T PRK07681 33 KMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SG---IQEFHEAVTEYYNNTHNVILNA-DKEVLLLMGSQD 104 (399)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CC---cHHHHHHHHHHHHHHhCCCCCC-CCeEEECCCcHH
Confidence 56888777763 67889999887765321123331 22 2345555556777777754221 0157779998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
|+..++.++++|||+|++++|.|.++.. .+...|. ++++++++++ .+.+|++++++.+.. ++|+|+++
T Consensus 105 al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~ 173 (399)
T PRK07681 105 GLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKKENDFLPDLELIPEEIAD-KAKMMILN 173 (399)
T ss_pred HHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEEe
Confidence 9999999999999999999998765432 2334555 6777777754 357899999988876 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-c--ccEEEeccCccc--CCCCceEEE
Q 010008 250 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-Y--CDVVTTTTHKSL--RGPRGGMIF 316 (520)
Q Consensus 250 ~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~--aDiv~~S~hK~l--~GprgG~I~ 316 (520)
+|+||+ .++ +++|.++|+++|++||+|+++ ..+.+.+....++ . . ..|++.|++|++ +|.|.||++
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i 252 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMI 252 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEe
Confidence 899997 555 677888899999999999994 4555433211111 1 1 237789999987 788999999
Q ss_pred eeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe
Q 010008 317 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 396 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~ 396 (520)
+++ ++.+++.........+.+...+.+ ...+|... ...+++..+.+.++++.+.+.|.+.|+++..+ ....
T Consensus 253 ~~~------~l~~~~~~~~~~~~~~~s~~~q~~-~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p-~~g~ 323 (399)
T PRK07681 253 GNE------EIVRALTQFKSNTDYGVFLPIQKA-ACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP-AGSM 323 (399)
T ss_pred cCH------HHHHHHHHHHhhcccCCCHHHHHH-HHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ceee
Confidence 877 676666543211112222333333 23344321 12335666777888889999998888876543 2356
Q ss_pred eEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
++|+++. .+++..++.+. ++++||.+. ||.. +...++++||++. .+++++++..+.|.+
T Consensus 324 f~~~~l~-~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 324 FVWAEIP-KGWTSLSFAYALMDRANVVVT----PGHAFGPHGEGFVRIALV------QDEEVLQQAVENIRN 384 (399)
T ss_pred EEEEECC-CCCCHHHHHHHHHHhCCEEEe----CChhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence 7788875 35566665554 455999994 5543 2223578999864 236888888877765
No 36
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=2e-24 Score=224.03 Aligned_cols=332 Identities=14% Similarity=0.079 Sum_probs=225.2
Q ss_pred cceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 010008 95 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 174 (520)
Q Consensus 95 ~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~ 174 (520)
.+-|+++...+++.|++++..... .+ +.++.+.++ .+++.+++++|+++++. ..+.+.||++|+..
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~~-~~-----------~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDWC-TW-----------DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCCC-CC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 355778888899999999865431 11 234555555 57789999999976321 12344667799999
Q ss_pred HHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 010008 175 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 253 (520)
Q Consensus 175 ~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-~pklIi~~~s~~ 253 (520)
++.+++.+||.+++..+.+.+. .+. ......|. +++.++++ +++.+|+++++++++.. +++++.+.++.+
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~---~~~---~~a~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGA---RIV---QIAEYLGI--PHHVVDTG-EVEPPDVVEVEAILAADPAITHIALVHCET 140 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhH---HHH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence 9999999999887765432111 000 01223454 44445554 45789999999998752 356676665555
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHh
Q 010008 254 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 330 (520)
Q Consensus 254 p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~ 330 (520)
++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||||.||.| |++++++ +..++
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~---~~D~~~~s~~K~l~~p~G~G~l~~~~------~~~~~ 211 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAEL---HIDYLISSANKCIQGVPGFGFVIARQ------AELAA 211 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhc---CccEEEecCccccccCCcceEEEECH------HHHHH
Confidence 54 789999999999999999999998776543222211 589999999999988887 9999987 33332
Q ss_pred hcccCC----------------CC-CCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHCCCEEecCC
Q 010008 331 INNAVF----------------PG-LQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVSGG 392 (520)
Q Consensus 331 i~~~~~----------------p~-~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g 392 (520)
+..... ++ ...+++.+.+.++..|++.+... ++++..+++.++++++.+.|.+.|+.++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 291 (363)
T TIGR02326 212 CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDD 291 (363)
T ss_pred hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCc
Confidence 211000 01 12245667777888888776544 3677788999999999999988999886532
Q ss_pred -CCCe-eEEEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 393 -SDNH-LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 393 -t~~~-~~~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
..++ ..++.+... .++...+.+.|++.||.+..+ .. ....+||||+.... +.+|++++++.|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g----~~--~~~~~iRi~~~~~~----~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 292 EIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPG----KV--SQVDCFRIGNIGEV----DAADITRLLTAIGKAM 360 (363)
T ss_pred ccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECC----cC--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence 1222 233444321 246677888899999999543 21 13468999975443 4799999999998875
No 37
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=9.2e-25 Score=228.43 Aligned_cols=351 Identities=15% Similarity=0.170 Sum_probs=226.9
Q ss_pred ccccChHHHHHHHHHHHHhhccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 74 LGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 74 l~~~d~~~~~~~~~e~~~~~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
+....+.+...+... ..+.+.|+|..+++. +++.+.+++...+.... .+|+. ......+.+..+++++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP------MAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC------CCCcHHHHHHHHHHHHHH
Confidence 344444455554333 234467889887754 47888888877665321 22322 122345656667889999
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 010008 152 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 230 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 230 (520)
+|++.+.. -+|.+++|+ +|+..++.++++|||+|++++|.|.++. ..+...|. +++.++++.+++.+|
T Consensus 83 ~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~d 151 (384)
T PRK12414 83 YGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA--------PIVRLQGA--TPVAIKLSPEDFRVN 151 (384)
T ss_pred hCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchH--------HHHHHcCC--EEEEEecCccccccC
Confidence 99863110 135557776 8999999999999999999999875432 12234454 666677765567899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC------cccEE
Q 010008 231 YDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YCDVV 299 (520)
Q Consensus 231 ~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~------~aDiv 299 (520)
++++++.+++ ++|+|+++.++||+ . .++++|.++|+++|+++++|+++. .+.+.+....++. ..-++
T Consensus 152 ~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 152 WDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSVI 229 (384)
T ss_pred HHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEEE
Confidence 9999999977 89999999999997 3 368888999999999999999953 4444332111221 12388
Q ss_pred EeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 010008 300 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 377 (520)
Q Consensus 300 ~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l 377 (520)
+.|++|.+ +|.|.||+++++ ++.+.+.........+.+...+.+ +..+|+. ...+....+.+.++++.+
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~q~a-~~~~l~~--~~~~~~~~~~~~~~r~~l 300 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA------ELMDEIRKVHQFMVFSADTPMQHA-FAEALAE--PASYLGLGAFYQRKRDLL 300 (384)
T ss_pred EecccccccCccceEEEEecCH------HHHHHHHHHHhheecCCCcHHHHH-HHHHhcC--ChHHHHHHHHHHHHHHHH
Confidence 89999976 789999999987 566655443211112222333333 2333432 123345567788889999
Q ss_pred HHHHHHCCCEEecCCCCCeeEEEEecCC-C-CCHHHHHHHHhhcCeEEcCCCCCCCC-C--CCCCCEEEEccCCccccCC
Q 010008 378 ASRLVELGYKLVSGGSDNHLVLVDLRPM-G-IDGARVEKILDMASITLNKNSVPGDK-S--ALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 378 ~~~L~~~G~~v~~~gt~~~~~~vd~~~~-g-~~~~~~~~~L~~~gI~v~~~~~Pg~~-~--~~~~~giRig~~~~tt~g~ 452 (520)
.+.|++.|+.+..+ ..+.++|+++... + .+.+.+.+.|+++||.+ .||+. + ....++|||+...
T Consensus 301 ~~~L~~~g~~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v----~pg~~f~~~~~~~~~iRis~~~------ 369 (384)
T PRK12414 301 ARELAGSRFELLPS-EGSFFMLARFRHFSDESDSDFVLRLIRDARVAT----IPLSAFYTDGTDTGLIRLSFSK------ 369 (384)
T ss_pred HHHHHhCCCeecCC-CcceEEEEcccccCCCCHHHHHHHHHHhCCEEE----ecchhhcCCCCCCCEEEEEecC------
Confidence 99999888876543 2355666677531 2 23455667888999999 45543 1 1124689998652
Q ss_pred CHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIH 465 (520)
Q Consensus 453 ~~~d~~~la~~i~ 465 (520)
.++++++..+.|.
T Consensus 370 ~~~~~~~~~~rl~ 382 (384)
T PRK12414 370 DDATLVEGARRLC 382 (384)
T ss_pred CHHHHHHHHHHHh
Confidence 3677776666654
No 38
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=227.09 Aligned_cols=357 Identities=16% Similarity=0.184 Sum_probs=228.0
Q ss_pred hhccccChHHHHHHHHHHHHhhccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 010008 72 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 149 (520)
Q Consensus 72 ~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~ 149 (520)
.++.......+..+.+......+.|+|..+++. +++.+.+++...+.+.. .+| +.......+++...+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~ 84 (391)
T PRK08361 12 GRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THY------TPNAGIPELREAIAEYYK 84 (391)
T ss_pred HHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCC------CCCCCcHHHHHHHHHHHH
Confidence 334433343333333332222456888877764 46788888887665432 122 111223466666667777
Q ss_pred HHcCC--CCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-
Q 010008 150 AAFNL--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 225 (520)
Q Consensus 150 ~lfg~--~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~- 225 (520)
+.+|. +++ +|.+++|+ +|+..++.++++|||+|++++|+|.+... .+...|. +++.++++++
T Consensus 85 ~~~g~~~~~~----~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~ 150 (391)
T PRK08361 85 KFYGVDVDVD----NVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREEN 150 (391)
T ss_pred HHhCCCCCcc----cEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCcc
Confidence 77764 444 55567776 89999999999999999999998765431 2334454 6667777654
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC-C---cc
Q 010008 226 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YC 296 (520)
Q Consensus 226 ~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~-~---~a 296 (520)
++.+|++++++.+++ ++++|+++.|+||+ ..+ +++|.++|+++++++|+|+++ ..+.+.+....++ . ..
T Consensus 151 ~~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~ 228 (391)
T PRK08361 151 EFQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPY-EHFLYEGAKHYPMIKYAPDN 228 (391)
T ss_pred CCCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEccc-ccceeCCCCCCCHhhcCCCC
Confidence 467999999999987 79999999899987 667 788889999999999999995 3444322111111 1 24
Q ss_pred cEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcC-chhHHHHHHHHHH
Q 010008 297 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSN 373 (520)
Q Consensus 297 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~i~~n 373 (520)
++++.|+||++ +|.|.||+++++ ++.+.+.........+.+...+.++ ..+|+.-.. ...++..+++.++
T Consensus 229 ~i~~~s~SK~~~~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~ 301 (391)
T PRK08361 229 TILANSFSKTFAMTGWRLGFVIAPE------QVIKDMIKLHAYIIGNVASFVQIAG-IEALRSKESWKAVEEMRKEYNER 301 (391)
T ss_pred EEEEecCchhcCCcHhhhhhhccCH------HHHHHHHHHHhhhccCCChHHHHHH-HHHhcCCcccHHHHHHHHHHHHH
Confidence 58889999987 677889999987 5665554321111112222222322 223432111 1235667777888
Q ss_pred HHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCC-CCCCCCEEEEccCCcccc
Q 010008 374 CRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTR 450 (520)
Q Consensus 374 a~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~ 450 (520)
++.+.+.|++. |+.+..+ ..+.++|+++...+++..++.+.| +++||.+. ||.. +...++++||++.
T Consensus 302 ~~~~~~~L~~~~~~~~~~p-~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~----- 371 (391)
T PRK08361 302 RKLVLKRLKEMPHIKVFEP-KGAFYVFANIDETGMSSEDFAEWLLEKARVVVI----PGTAFGKAGEGYIRISYA----- 371 (391)
T ss_pred HHHHHHHHHhCCCCeecCC-CEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCEEEEEec-----
Confidence 88899999874 7776543 234567778764456777766655 57899994 5543 2234578999865
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 010008 451 GFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 451 g~~~~d~~~la~~i~~~l~ 469 (520)
..++++++..+.|.++++
T Consensus 372 -~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 372 -TSKEKLIEAMERMEKALE 389 (391)
T ss_pred -CCHHHHHHHHHHHHHHHh
Confidence 235677777777776654
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=226.20 Aligned_cols=334 Identities=14% Similarity=0.069 Sum_probs=221.9
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCCh
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg--~~~~~~~~~V~~~sG 168 (520)
.+.|+|..+++. +++.+.+++...+.+.. .+|+. ......+++...+++.+.+| ++++ +|.+++|
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH------NLGIPELREALARYVSRLHGVATPPE----RIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence 356889888863 57899999888775431 12332 11234566666678888888 5554 4555776
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC--CCCCCCHHHHHHHhhhcCCcE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~--~~~~iD~d~le~~i~~~~pkl 245 (520)
+ +|+..++.++++|||+|++.+|.|..+.. .+...|. +++.++++. .++.+|++++++.+++ ++++
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~ 161 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGA--RVVCVPLDFGGGGWTLDLDRLLAAITP-RTRA 161 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCC--EEEEeeCCCCCCCccCCHHHHHHhcCc-cceE
Confidence 6 89999999999999999999998764421 2234455 555666653 2457999999999876 8999
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccc-c-ccCCCCC-----cccEEEeccCccc--CCCC
Q 010008 246 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPFK-----YCDVVTTTTHKSL--RGPR 311 (520)
Q Consensus 246 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~-~~~~p~~-----~aDiv~~S~hK~l--~Gpr 311 (520)
|+++.++||+ .. ++++|.++|+++|+++|+|++|. ++... + ..+..+. ...+++.|+||++ +|.|
T Consensus 162 i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 240 (382)
T PRK06108 162 LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWR 240 (382)
T ss_pred EEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence 9998889987 33 46888999999999999999954 44432 1 1111111 1237889999976 6888
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEec
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 390 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~ 390 (520)
.||+++++ ++.+.+.........+.+...+. +...+|... ...+++..+++.++++.+.+.|.+. |+.+..
T Consensus 241 iG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~-a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (382)
T PRK06108 241 LGWLVAPP------ALGQVLEKLIEYNTSCVAQFVQR-AAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAK 312 (382)
T ss_pred eeeeeCCH------HHHHHHHHHHHhcccCCChHHHH-HHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC
Confidence 99999987 56666544321111233333333 223344431 1234677788888888999999874 777765
Q ss_pred CCCCCeeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 391 GGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+ ..+.++|+++.. ..+..++.+. ++++||.+ .||.. ++..++++||+... +++++++..+.|.+++
T Consensus 313 p-~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v----~pg~~f~~~~~~~~Ris~~~------~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 313 P-DGAMYAFFRIPG-VTDSLALAKRLVDEAGLGL----APGTAFGPGGEGFLRWCFAR------DPARLDEAVERLRRFL 380 (382)
T ss_pred C-CeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEE----eCchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHH
Confidence 4 234556777743 2355555554 57899999 44443 22346789998763 4788998888887765
Q ss_pred H
Q 010008 469 E 469 (520)
Q Consensus 469 ~ 469 (520)
+
T Consensus 381 ~ 381 (382)
T PRK06108 381 A 381 (382)
T ss_pred h
Confidence 3
No 40
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=1.5e-24 Score=227.07 Aligned_cols=335 Identities=15% Similarity=0.134 Sum_probs=219.9
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sG 168 (520)
.+.|+|..+++. +++.+.+++...+.+....+|+. ..| ...+.+...+++.+.+|. ++++ +|.+|+|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~~~---~I~it~G 100 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHG---TLDFREAAAQWYEQRFGLAVDPET---EVLPLIG 100 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCC---CHHHHHHHHHHHHHhhCCcCCCcC---eEEECCC
Confidence 356888888863 57889999887764332223332 122 235555556777777775 4431 4677899
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklI 246 (520)
+ +|+..++.++++|||+|++.+|.|.++.. .+...|. ++++++++++ .+.+|++++++.+.. ++|+|
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 169 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPLRAENDFLPVFADIPTEVLA-QARLM 169 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEECCCccCCCCCHHHHHHhhcc-cceEE
Confidence 8 89999999999999999999998865532 2334565 6667777644 367899999888766 79999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc--cCCCCC---ccc--EEEeccCccc--CCCCc
Q 010008 247 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK---YCD--VVTTTTHKSL--RGPRG 312 (520)
Q Consensus 247 i~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~--~~~p~~---~aD--iv~~S~hK~l--~Gprg 312 (520)
+++.|+||+ ..+ +++|.++|+++|++||+|++ |..+.+.+. .++... ..+ +++.|++|++ +|.|.
T Consensus 170 ~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRi 248 (388)
T PRK07366 170 VLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFP-YVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRI 248 (388)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecc-hhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhh
Confidence 999999997 444 56777789999999999998 455554332 111111 112 6789999986 79999
Q ss_pred eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCC
Q 010008 313 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 392 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g 392 (520)
||+++++ ++.+++.....+...+++.....+++ .++.. ....+++..+.+.++++.+.+.|++.|+.+..+
T Consensus 249 G~~v~~~------~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p- 319 (388)
T PRK07366 249 GFAIGNA------QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALHQIGWPVPLP- 319 (388)
T ss_pred eehcCCH------HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-
Confidence 9999987 67666654332222222222222222 23432 112346777888888999999998888765443
Q ss_pred CCCeeEEEEecCC-CCCHHHHH-HHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 393 SDNHLVLVDLRPM-GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 393 t~~~~~~vd~~~~-g~~~~~~~-~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..+.++|+++... +.+..++. .++++.||.+. ||.. +...++++||++. .+++++++..+.|.+.
T Consensus 320 ~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 320 EATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAAS----PGSGFGKSGEGYVRFALV------HDPDILEEAVERIAAF 387 (388)
T ss_pred CeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEe----CchHhCcCCCCeEEEEec------CCHHHHHHHHHHHHHh
Confidence 2356778887532 12345554 55578999994 5543 2223578999864 2367777777777653
No 41
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.7e-24 Score=224.25 Aligned_cols=357 Identities=14% Similarity=0.108 Sum_probs=229.8
Q ss_pred ccccChHHHHHHHHHHHHhhccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 74 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 74 l~~~d~~~~~~~~~e~~~~~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
+....+.++..+.....+....++|..+++ .+++.+.+|+...+.+.-..+|+. ..| ...+.+..++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~lr~~~~~~l~~~ 81 (389)
T PRK05957 8 MDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQG---IPPLLEAITQKLQQD 81 (389)
T ss_pred HHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHH
Confidence 333444445444333333235588887775 368889999987765332223322 122 234445566788888
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 010008 152 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 230 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 230 (520)
+|.+.+.. .+|.+++|+ +++..++.++++|||+|++++|.|..+.. .+...|. +++.++++ +++.+|
T Consensus 82 ~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d 149 (389)
T PRK05957 82 NGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNYQLQ 149 (389)
T ss_pred hCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCCCcC
Confidence 89752100 146668887 89888899999999999999998765532 1233454 66666665 457899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC----c-ccEE
Q 010008 231 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK----Y-CDVV 299 (520)
Q Consensus 231 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~----~-aDiv 299 (520)
++++++.+++ ++|+|++++++||+ ..+ +++|.++|+++|+++++|+++ ..+.+.+. +..+.. . -.|+
T Consensus 150 ~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (389)
T PRK05957 150 PEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNHTIS 227 (389)
T ss_pred HHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCcEEE
Confidence 9999999987 89999999999987 555 888999999999999999984 45544321 111111 1 2377
Q ss_pred EeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 010008 300 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 377 (520)
Q Consensus 300 ~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l 377 (520)
+.|++|.+ +|.|.||+++++ ++.+++.........+.+...+.++. .+|+.. ...+++..+++.++++.+
T Consensus 228 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~~r~~l 299 (389)
T PRK05957 228 LYSLSKAYGFASWRIGYMVIPI------HLLEAIKKIQDTILICPPVVSQYAAL-GALQVG-KSYCQQHLPEIAQVRQIL 299 (389)
T ss_pred EecchhhccCccceeEEEecCH------HHHHHHHHHHhhcccCCCcHHHHHHH-HHHhCC-hHHHHHHHHHHHHHHHHH
Confidence 89999986 788899999987 67666654332222233333333322 234321 112466777888889999
Q ss_pred HHHHHHC-CC-EEecCCCCCeeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCC
Q 010008 378 ASRLVEL-GY-KLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 378 ~~~L~~~-G~-~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~ 453 (520)
.+.|++. |+ .+..+ ..+.++|+++. .+++..++.+.| ++.||.+ .||+. +....+++||++... .
T Consensus 300 ~~~L~~~~~~~~~~~~-~gg~~~~~~~~-~~~~~~~~~~~l~~~~gv~v----~pg~~f~~~~~~~iRis~~~~-----~ 368 (389)
T PRK05957 300 LKSLGQLQDRCTLHPA-NGAFYCFLKVN-TDLNDFELVKQLIREYRVAV----IPGTTFGMKNGCYLRIAYGAL-----Q 368 (389)
T ss_pred HHHHHhcCCCccccCC-CeeEEEEEeCC-CCCChHHHHHHHHHHCCEEE----ccchhhCCCCCCEEEEEEecC-----C
Confidence 9999874 43 43332 22456677774 356776666665 5799999 45543 222246899997543 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHEGVE 469 (520)
Q Consensus 454 ~~d~~~la~~i~~~l~ 469 (520)
++++++..+.|.+.++
T Consensus 369 ~~~l~~~~~~l~~~~~ 384 (389)
T PRK05957 369 KATAKEGIERLVQGLK 384 (389)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777777777766654
No 42
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=1e-24 Score=229.45 Aligned_cols=341 Identities=18% Similarity=0.189 Sum_probs=229.2
Q ss_pred ceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCCCCC-CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHH
Q 010008 96 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPAN 172 (520)
Q Consensus 96 i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy-~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG-s~A~ 172 (520)
+.|. ++..++++.|++++...+.+.+ +.|+.+.+ .+... +..-+.+++.+++++|+++++ |..++| ++++
T Consensus 5 ~yld~aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~r~~la~~~g~~~~~----v~~~~g~t~a~ 77 (402)
T TIGR02006 5 IYLDYAATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEA-EEAVENARNQVAELIGADSRE----IVFTSGATESN 77 (402)
T ss_pred EEeeCCcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHH-HHHHHHHHHHHHHHhCCCCCe----EEEeCCHHHHH
Confidence 4554 3556889999999988876554 34442211 12121 223335678899999998763 334554 5898
Q ss_pred HHHHHhh----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEE
Q 010008 173 FEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 173 ~~~l~al----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~ 248 (520)
..++.++ .++||+|++.+++|.+...... .+...|. +++.++++ +++.+|++++++++++ ++++|++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-----~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v 148 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-----YLEREGF--EVTYLPPK-SNGLIDLEELKAAIRD-DTILVSI 148 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEE
Confidence 8887765 3789999999887765432111 1122344 55566666 4678999999999987 7999998
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchh
Q 010008 249 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 325 (520)
Q Consensus 249 ~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~ 325 (520)
.+++|++ ..|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|+||++ ||.| |+++.+++
T Consensus 149 ~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~---~~D~~~~s~~K~~-gp~G~G~l~~~~~----- 219 (402)
T TIGR02006 149 MHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNEL---KVDLMSISGHKIY-GPKGIGALYVRRK----- 219 (402)
T ss_pred ECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCcccc---CCCEEEEehhhhc-CCCceEEEEEccC-----
Confidence 8877765 789999999999999999999999888664332211 6899999999964 7877 88888863
Q ss_pred hHHHhhcccCC------CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCC--CCe
Q 010008 326 ELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DNH 396 (520)
Q Consensus 326 ~l~~~i~~~~~------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt--~~~ 396 (520)
...++..... ....|+++...++++..+++.+. .+++...++..+.++.+.+.|.+ .++.+..+.. ..+
T Consensus 220 -~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~ 297 (402)
T TIGR02006 220 -PRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG 297 (402)
T ss_pred -CCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 1112221111 11257889999999999998765 45677778888888888888876 4666654311 112
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCC--CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~--~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
...+.+. +++++.+...| .+|.++.+. .++... ....+.||+|+..+|| ++|++++++
T Consensus 298 ~~~v~f~--~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid~l~~ 369 (402)
T TIGR02006 298 NLNVSFN--YVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEIDYAVK 369 (402)
T ss_pred eEEEEEe--CcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHH
Confidence 2233343 34566666555 366654432 121110 0124789999988876 899999999
Q ss_pred HHHHHHHHH
Q 010008 463 FIHEGVEIT 471 (520)
Q Consensus 463 ~i~~~l~~~ 471 (520)
.|.++++..
T Consensus 370 ~l~~~~~~~ 378 (402)
T TIGR02006 370 LVKSAIDKL 378 (402)
T ss_pred HHHHHHHHH
Confidence 999987653
No 43
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=6.4e-24 Score=221.95 Aligned_cols=334 Identities=16% Similarity=0.134 Sum_probs=219.4
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
.+.++|..+++. +++.+.+++.+.+.+....+|+. ..| ..++.+...+++.+.+|.+.+.- -+|.+++|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~ 101 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEG---MLAYRQAVADWYKRRFGVELDPE-TEVLSLIGSK 101 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcH
Confidence 356788777653 57889999887765432234443 223 23555566678887777753210 146678887
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~-~~iD~d~le~~i~~~~pklIi~ 248 (520)
+++..++.++++|||+|++++|+|.++.. .....|. +++.++++.++ +.+|++++++.+.+ ++|+|++
T Consensus 102 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i 170 (383)
T TIGR03540 102 EGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFI 170 (383)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEEEE
Confidence 89999999999999999999998765421 2234555 66677776443 56899999988876 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC---CC---cccEEEeccCccc--CCCCceEE
Q 010008 249 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMI 315 (520)
Q Consensus 249 ~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p---~~---~aDiv~~S~hK~l--~GprgG~I 315 (520)
++|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ +. ...+++.|++|++ +|.|.||+
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 249 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA 249 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEE
Confidence 9889997 555 6888899999999999999954 44433311111 11 1237789999987 68899999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 395 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~ 395 (520)
++++ ++.+++.........+.+...+ .+...++... ....++..+++.++++.+.+.|++.|+.+..+. .+
T Consensus 250 i~~~------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~-~~ 320 (383)
T TIGR03540 250 VGNA------DLIAGLGKVKTNVDSGVFQAIQ-YAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKPK-AT 320 (383)
T ss_pred eCCH------HHHHHHHHHHHhcccCCChHHH-HHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCC-cc
Confidence 9887 6666655432111122222223 3333344331 123366677788889999999998888876542 35
Q ss_pred eeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
.++|+++. .+++..++.+. |++.||.+. ||.. +...++++||++. ..++++++..+.|.
T Consensus 321 ~~~~~~l~-~~~~~~~~~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 321 FYVWVPVP-EGYTSAEFAARLLEETGVVVT----PGVGFGEYGEGYIRISLT------VPDERLEEAVARIK 381 (383)
T ss_pred eEEEEECC-CCCCHHHHHHHHHHHCCEEEe----cchhhCccCCCeEEEEec------CCHHHHHHHHHHHh
Confidence 66788775 35666666655 578999995 4432 2223568999974 23566666555543
No 44
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.5e-24 Score=225.57 Aligned_cols=336 Identities=15% Similarity=0.144 Sum_probs=223.5
Q ss_pred ccceEecCC-C--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--C-CCCceeeecCC
Q 010008 94 KSLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--E-NKWGVNVQPLS 167 (520)
Q Consensus 94 ~~i~Liase-n--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~-~~~~~~V~~~s 167 (520)
+.++|..++ + .+++.+++++...+.+....+|+. ..|. ..+.+...+++++.+|.+ + + +|.+++
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~LR~aia~~l~~~~g~~~~~~~----~I~it~ 109 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRGD---ADIRELLAARLAAFTGAPVDAAD----ELIITP 109 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCCC---HHHHHHHHHHHHHHhCCCCCCCC----CEEEeC
Confidence 557777544 4 356788888887765432334543 2232 345556667888888964 3 3 466688
Q ss_pred hH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC---C-CCCCCCHHHHHHHhhhcC
Q 010008 168 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFR 242 (520)
Q Consensus 168 Gs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d---~-~~~~iD~d~le~~i~~~~ 242 (520)
|+ +++..++.++++|||+|++++|.|.++.. .+...|. ++++++++ + +++.+|+++|++++++ +
T Consensus 110 Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~ 178 (405)
T PRK06207 110 GTQGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA-G 178 (405)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh-c
Confidence 87 89999999999999999999998765431 2334555 55555554 1 2478999999999877 7
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---Cc-cc--EEEeccCccc--CC
Q 010008 243 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD--VVTTTTHKSL--RG 309 (520)
Q Consensus 243 pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~~-aD--iv~~S~hK~l--~G 309 (520)
+|+|++++|+||+ .++ +++|.++|+++|++||+|++ |..+++.+....++ .. .| +++.|++|++ +|
T Consensus 179 ~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~-Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpG 257 (405)
T PRK06207 179 VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQL-YSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSG 257 (405)
T ss_pred CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcc
Confidence 9999999999997 554 77888899999999999998 45555433211111 11 12 7889999986 69
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEE
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 388 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v 388 (520)
.|.||+++++ ++.+++.........+.+.. ..+++..+|+.- ...+++..+++.++++.+.+.|.+. |+.+
T Consensus 258 lRiG~ii~~~------~l~~~~~~~~~~~~~~~~~~-~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 329 (405)
T PRK06207 258 YRLGVAFGSP------AIIDRMEKLQAIVSLRAAGY-SQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFV 329 (405)
T ss_pred cceEEEEcCH------HHHHHHHHHHhHhccCCCHH-HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 9999999887 66666654322222222222 223333344321 1224666777778888888888774 7776
Q ss_pred ecCCCCCeeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 389 VSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 389 ~~~gt~~~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
..+ ....++|+++...+++..++.+.| +++||.+ .||.. +...++++||++.. .++++++..+.|.+
T Consensus 330 ~~p-~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v----~pG~~F~~~~~~~~Ris~~~------~~~~l~~al~rl~~ 398 (405)
T PRK06207 330 RAP-QAGSYLFPRLPRLAVSLHDFVKILRLQAGVIV----TPGTEFSPHTADSIRLNFSQ------DHAAAVAAAERIAQ 398 (405)
T ss_pred cCC-CeeEEEEEeCcccCCCHHHHHHHHHHhcCEEE----eCchHhCCCCCCeEEEEecC------CHHHHHHHHHHHHH
Confidence 543 234677888864345666666666 5799999 45543 22235789998752 36788888887777
Q ss_pred HHHH
Q 010008 467 GVEI 470 (520)
Q Consensus 467 ~l~~ 470 (520)
+++.
T Consensus 399 ~l~~ 402 (405)
T PRK06207 399 LIER 402 (405)
T ss_pred HHHH
Confidence 6653
No 45
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.94 E-value=2.7e-24 Score=225.08 Aligned_cols=330 Identities=13% Similarity=0.093 Sum_probs=214.0
Q ss_pred ccceEec--CCCCChHHHHHHHhhhhhccCCCCCCCC-CCC---CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 010008 94 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYY---GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 167 (520)
Q Consensus 94 ~~i~Lia--sen~~~~~V~ea~~s~l~~~y~~G~p~~-ryy---~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~s 167 (520)
.-|+|.+ --.++++++++|+..+.. .| +.|.. .+. +..+.+++ +++.+++++|++. + +.+++
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----l~~~lA~~~g~~~----~-~~~~g 86 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIAD----FHEDLAEFLGMDE----A-RVTHG 86 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHHH----HHHHHHHHhCCCc----E-EEeCC
Confidence 3466654 346889999999998773 22 22211 111 11223344 4478999999975 2 22355
Q ss_pred hHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc-----
Q 010008 168 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF----- 241 (520)
Q Consensus 168 Gs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~le~~i~~~----- 241 (520)
|++|+.+++.+++++||+|++..+.|.+.+ . .+...|. +++.++++ .+++.+|++++++.+++.
T Consensus 87 ~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~---~-----~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 156 (387)
T PRK09331 87 AREGKFAVMHSLCKKGDYVVLDGLAHYTSY---V-----AAERAGL--NVREVPKTGYPEYKITPEAYAEKIEEVKEETG 156 (387)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCchHHHH---H-----HHHHcCC--EEEEEeCccCcCCCcCHHHHHHHHHHhhhccC
Confidence 669999999999999999999887654432 1 2334565 56666552 135789999999998753
Q ss_pred -CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCC-CceEEEe
Q 010008 242 -RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP-RGGMIFF 317 (520)
Q Consensus 242 -~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gp-rgG~I~~ 317 (520)
++++|++.++++++ ..|+++|.++|+++|+++++|++|+.|....+... .++|++++|+||++++| ++|++++
T Consensus 157 ~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~---~g~D~~~~s~~K~l~~~~~~G~l~~ 233 (387)
T PRK09331 157 KPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKK---LGADFIVGSGHKSMAASAPSGVLAT 233 (387)
T ss_pred CCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEE
Confidence 68999998777654 78999999999999999999999988754222111 16899999999999765 4599999
Q ss_pred eCCCcchhhHHHhhcccCCCC-------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEe
Q 010008 318 KKDPVLGVELESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 389 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~ 389 (520)
++ ++.+.+.+...+. ..++.....++++..+++.+.. . .+..++..++++++.+.|.+. |++++
T Consensus 234 ~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~l~g~~~~ 305 (387)
T PRK09331 234 TE------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE-R-VKRWDEEVKKARWFVDELEKIEGFKQL 305 (387)
T ss_pred CH------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 87 5555543321110 1112222223333334544321 1 223455677888999999987 99988
Q ss_pred cCC-CCCeeEEEEec-------CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 390 SGG-SDNHLVLVDLR-------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 390 ~~g-t~~~~~~vd~~-------~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
... ..+.++.++.. ..+.++..+.+.|.++||.+ ++.+ ....+|+++ +|.+++|+++++
T Consensus 306 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~----~~~~----~~~i~ri~~-----~g~t~~di~~l~ 372 (387)
T PRK09331 306 GEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHG----IKPG----ATKEFKLST-----YGLTWEQVEYVA 372 (387)
T ss_pred ccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceE----EccC----CceEEEEEe-----ccCCHHHHHHHH
Confidence 421 22344444432 11223466888999999984 2211 133467765 456789999999
Q ss_pred HHHHHHHH
Q 010008 462 DFIHEGVE 469 (520)
Q Consensus 462 ~~i~~~l~ 469 (520)
+.|.++++
T Consensus 373 ~aL~~i~~ 380 (387)
T PRK09331 373 DAFKEIAE 380 (387)
T ss_pred HHHHHHHH
Confidence 99998765
No 46
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=6e-24 Score=220.91 Aligned_cols=332 Identities=14% Similarity=0.095 Sum_probs=226.5
Q ss_pred eEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 010008 97 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 176 (520)
Q Consensus 97 ~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l 176 (520)
-++++...+++.|+++|...+. .+ ..++.+.++ .+++.+++++|++++.. ..+.+.||++++..++
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~~-~~-----------~~~~~~~~~-~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~~ 73 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDWG-SW-----------DDDFNALTA-SVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAAI 73 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCCC-CC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHHH
Confidence 4677788889999999876531 11 123445444 56788999999965321 2234567889999999
Q ss_pred HhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCCC
Q 010008 177 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYPR 255 (520)
Q Consensus 177 ~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p~ 255 (520)
.+++.+||+|++.++.+.++. + .......|. +++.++++ +++.+|++++++.+++. ++++|++.+++|++
T Consensus 74 ~~l~~~~~~vlv~~~~~~~~~---~---~~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~t 144 (368)
T PRK13479 74 GSLVPRDGKVLVPDNGAYGAR---I---AQIAEYLGI--AHVVLDTG-EDEPPDAAEVEAALAADPRITHVALVHCETTT 144 (368)
T ss_pred HhccCCCCeEEEEeCCchHHH---H---HHHHHHcCC--cEEEEECC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCcc
Confidence 999999999998875432210 0 011233454 45555554 34679999999988752 45678787777665
Q ss_pred --CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc
Q 010008 256 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 256 --~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~ 332 (520)
..|+++|.++|+++|+++++|++|..|....++... ++|++++|+|||+.||.| |++++++ ++.+++.
T Consensus 145 G~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~---~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~~~~ 215 (368)
T PRK13479 145 GILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAEL---GIDALISSANKCIEGVPGFGFVIARR------SELEACK 215 (368)
T ss_pred ccccCHHHHHHHHHHcCCEEEEEcccccCCcccccccc---CceEEEecCccccccCCCceEEEECH------HHHHHhh
Confidence 789999999999999999999887666432221111 589999999999988877 9999987 4444433
Q ss_pred ccCCC----------------CCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCCC-C
Q 010008 333 NAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGS-D 394 (520)
Q Consensus 333 ~~~~p----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt-~ 394 (520)
....+ ....+++...++++..+++.+...+ +++..+++.++++.+.+.|.+.|++++.+.. .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 295 (368)
T PRK13479 216 GNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQ 295 (368)
T ss_pred cCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhc
Confidence 22111 1112567777888888888765443 5777789999999999999999988764321 1
Q ss_pred -CeeEEEEecC-CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 395 -NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 395 -~~~~~vd~~~-~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+....+.+.. .+++..++.+.|.+.||.+.. |.. ...+.+|+|+...+ +++|++++++.|+++++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~----g~~--~~~~~iRis~~~~~----t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 296 SPIIVTFHAPADPAYDFKEFYERLKEQGFVIYP----GKL--TQVDTFRIGCIGDV----DAADIRRLVAAIAEALYW 363 (368)
T ss_pred CceEEEEECCCCCCcCHHHHHHHHHHCCEEEec----CCC--CCCCEEEEecCCCC----CHHHHHHHHHHHHHHHHH
Confidence 1112222221 235667888899999999954 221 12468999975443 489999999999988763
No 47
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.94 E-value=8.3e-25 Score=218.70 Aligned_cols=302 Identities=19% Similarity=0.139 Sum_probs=205.2
Q ss_pred hhhccccChHHHHHHHHHHHHhhccce-EecCC-C-CChHHHHHHHhhhhhcc-CCCCCCCCCCCCcchhHHHHHHHHHH
Q 010008 71 DYSLGEADPEVCEIITKEKERQFKSLE-LIASE-N-FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQK 146 (520)
Q Consensus 71 ~~~l~~~d~~~~~~~~~e~~~~~~~i~-Liase-n-~~~~~V~ea~~s~l~~~-y~~G~p~~ryy~g~~~~d~lE~~a~~ 146 (520)
.+++....|.+|..+.+.... -...+ |..+. + ++|+-|.+++....... ..+++++ ||- .++.+..++
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e-~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~---~G~----p~L~~aL~k 80 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAE-HKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG---YGL----PQLRKALAK 80 (420)
T ss_pred cccccccCCcHHHHHHHHHHh-cCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc---CCc----hHHHHHHHH
Confidence 355677788888877554332 23344 76665 3 47888899988776543 1222233 332 234444457
Q ss_pred HHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC--
Q 010008 147 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-- 223 (520)
Q Consensus 147 ~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d-- 223 (520)
.+++++|...+- ..+|.+|+|+ +|+..++++++++||+|++++|.+.... ..+.+.|. .++.++..
T Consensus 81 ~~se~~~~~~~~-~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~--------~~~~maG~--tpv~v~~~~~ 149 (420)
T KOG0257|consen 81 AYSEFYGGLLDP-DDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYI--------PQVVMAGG--TPVFVPLKPK 149 (420)
T ss_pred HHHHHhccccCC-cccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhh--------hHHhhcCC--cceeeccccc
Confidence 788888875321 1367889999 9999999999999999999999664432 35667776 45555444
Q ss_pred -----CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEechhhcccccccc-cCCC
Q 010008 224 -----ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP 292 (520)
Q Consensus 224 -----~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p 292 (520)
..++.+|.++++.++++ |||+|+++.|+||+ . -.+++|++||++||+++|+|++ |.-+++.+. +.+.
T Consensus 150 ~g~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h~r~ 227 (420)
T KOG0257|consen 150 EGNVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV-YEWLVYDGNKHIRI 227 (420)
T ss_pred cccccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH-hHHHhhCCCcceee
Confidence 35689999999999999 99999999999997 3 3688999999999999999998 566676664 3221
Q ss_pred --CCc---ccEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccC--CCCCCCCChHHHHHHHHHHHHHh---cC
Q 010008 293 --FKY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHA---QS 360 (520)
Q Consensus 293 --~~~---aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~---~~ 360 (520)
+++ .-+.++|++|++ +|||.||+++++ .+........ +-....+|.. .|.+.|+... .+
T Consensus 228 aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~------~L~~~~~~vh~~~~~~~~Tp~q---~A~a~a~~~~~~~~~ 298 (420)
T KOG0257|consen 228 ASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK------HLYSALFPVHQNFVFTCPTPIQ---EASAAAFALELACLQ 298 (420)
T ss_pred ecCCchhheEEEeccccceeeeeeeeeeeeechH------HhhhhHHHHhhccccccCcHHH---HHHHHHHhhhhhccC
Confidence 132 347789999986 899999999965 3333221110 1111222222 2233333322 11
Q ss_pred c---hh-HHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEec
Q 010008 361 P---EF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 361 ~---~~-~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~ 403 (520)
+ ++ .++.+.++++++.|++.|.+.|+++..+ ..+.++|+|+.
T Consensus 299 p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p-~gayyl~adfs 344 (420)
T KOG0257|consen 299 PGGSYFITELVKEYKEKRDILAKALEELGLKVTGP-EGAYYLWADFS 344 (420)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCceEEEEecc
Confidence 2 34 4488999999999999999999998764 34678888987
No 48
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.9e-24 Score=222.97 Aligned_cols=350 Identities=17% Similarity=0.082 Sum_probs=231.8
Q ss_pred hHHHHHHHHHHHHhh------ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 010008 79 PEVCEIITKEKERQF------KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 150 (520)
Q Consensus 79 ~~~~~~~~~e~~~~~------~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~ 150 (520)
.+.+..+....++.+ ..|+|..+++. +++.+.+++...+......+||. .| ...+.+...+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G---~~~lr~aia~~~~~ 96 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NG---IQEFKEAAARYMEK 96 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CC---cHHHHHHHHHHHHH
Confidence 334555544444331 35888887764 57788888876553221223442 12 34566566677777
Q ss_pred HcCCC---CCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-
Q 010008 151 AFNLD---ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 225 (520)
Q Consensus 151 lfg~~---~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~- 225 (520)
.+|++ ++ -+|.+|+|+ +++..++.++++|||+|++++|.|.+... .+...|. +++.++++++
T Consensus 97 ~~g~~~~~~~---~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~ 163 (410)
T PRK06290 97 VFGVKDIDPV---TEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLLEEN 163 (410)
T ss_pred HcCCCcCCCc---ceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecCCCc
Confidence 77754 32 147789998 89999999999999999999998765422 2234455 7777777754
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC--CC---c
Q 010008 226 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---Y 295 (520)
Q Consensus 226 ~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p--~~---~ 295 (520)
++.+|++++++.+.. ++|+|+++.|+||+ .++ +++|.++|+++|++||+|+++. .+.+.+..++. +. .
T Consensus 164 ~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~~ 241 (410)
T PRK06290 164 NFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAKE 241 (410)
T ss_pred CCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCccc
Confidence 467899999998876 89999999999997 555 5677888999999999999954 44443322111 11 2
Q ss_pred ccEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 296 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 296 aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
.+|++.|++|++ +|.|.||+++++ ++.+.+.........+.+...+.+ ...+++. ....+...+++.++
T Consensus 242 ~~I~i~SfSK~~g~~GlRiG~ii~~~------~l~~~l~~~~~~~~~~~~~~~q~a-a~~~l~~--~~~~~~~~~~~~~~ 312 (410)
T PRK06290 242 VGVEIHSLSKAYNMTGWRLAFVVGNE------LIVKAFATVKDNNDSGQFIAIQKA-GIYALDH--PEITEKIREKYSRR 312 (410)
T ss_pred cEEEEeechhhcCCchhheEeEEeCH------HHHHHHHHHHhccccCCcHHHHHH-HHHHhhC--cHHHHHHHHHHHHH
Confidence 458999999986 789999999987 666666544333223332233332 2223432 12235677888889
Q ss_pred HHHHHHHHHHCCCEEecCCCCCeeEEEEecCCC------CCHHHHHHHHhhc-CeEEcCCCCCCCCCCCCCCEEEEccCC
Q 010008 374 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMG------IDGARVEKILDMA-SITLNKNSVPGDKSALVPGGIRIGSPA 446 (520)
Q Consensus 374 a~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g------~~~~~~~~~L~~~-gI~v~~~~~Pg~~~~~~~~giRig~~~ 446 (520)
++.+.+.|++.|+.+..+ ..+.++|+++...- .+..++.+.|.+. +|.+ +||.. + .+++||++..
T Consensus 313 ~~~l~~~L~~~g~~~~~p-~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~----~p~~~--~-~~~lRi~~~~ 384 (410)
T PRK06290 313 LDKLVKILNEVGFKAEMP-GGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLIST----VPWDD--A-GHFLRFSVTF 384 (410)
T ss_pred HHHHHHHHHhCCCeecCC-CeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEE----ECCcc--c-cCeEEEEEEc
Confidence 999999999888876543 23456677775321 2455666666554 5554 46542 2 3689998754
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+ -++++++++.+.+.+.++.
T Consensus 385 ~~---~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 385 EA---KDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred cc---ccccchhHHHHHHHHHHhh
Confidence 33 3589999999999988864
No 49
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=6.4e-24 Score=221.54 Aligned_cols=336 Identities=15% Similarity=0.119 Sum_probs=224.7
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCCh
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sG 168 (520)
.+.|+|..+++. +++.+.+++...+.+.+ .+|+. ......+++...+++.+.+|.+ +++ +|.+++|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~---~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA------NAGLLELRQEIAKYLKKRFAVSYDPND---EIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCCC---cEEEeCC
Confidence 356889888864 46677888877665332 23432 1223466666667888877764 321 4566887
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklI 246 (520)
+ +|+.+++.++++|||+|++++|+|+.... .....|. +++.++++.+ ++.+|++++++++.+ ++++|
T Consensus 90 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 158 (378)
T PRK07682 90 ASQALDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAI 158 (378)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEE
Confidence 6 89999999999999999999998764321 2233454 5556666533 478999999999877 89999
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC---cccEEEeccCccc--CCCCceE
Q 010008 247 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 247 i~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~---~aDiv~~S~hK~l--~GprgG~ 314 (520)
+++.|+||+ .+ ++++|.++|+++|+++|+|+++ .++.+.+...+ .+. ...+++.|++|++ +|.|.||
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIY-AELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 888899987 44 4888999999999999999994 45554332111 111 2347889999986 6889999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
+++++ ++.+++.........+.+...+.+ ...+|+.. ....+...+++.++++.+.+.|.+.|+.+..+ ..
T Consensus 238 ~~~~~------~~i~~l~~~~~~~~~~~~~~~q~a-~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g 308 (378)
T PRK07682 238 IAAPV------YFSEAMLKIHQYSMMCAPTMAQFA-ALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GG 308 (378)
T ss_pred hhcCH------HHHHHHHHHHHhhccCCCHHHHHH-HHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-Ce
Confidence 99987 666665433221122333333333 33345421 12346667788899999999999888876544 23
Q ss_pred CeeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+++.|+++.+.+++..++.+. |++.||.+. ||.. +...++++||++. .+++++++..+.|.++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~l~~~l~~l~~~l~ 375 (378)
T PRK07682 309 AFYAFPSISSTGLSSEEFAEQLLLEEKVAVV----PGSVFGESGEGFIRCSYA------TSLEQLQEAMKRMKRFVE 375 (378)
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHhCCEEEc----CchhhCcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHh
Confidence 455666665445666666655 568899995 4432 2223679999864 236888888888887765
No 50
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=4.1e-24 Score=223.80 Aligned_cols=335 Identities=14% Similarity=0.124 Sum_probs=218.9
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sG 168 (520)
.+.++|..+++. .++.+.+++...+.+.. .+|+. ......+++...+++.+.+|+ +++ +|.+++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~----~i~~t~G 98 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS------ALGLAPLREAIAAWYARRFGLDVAPE----RIVVTAG 98 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCChH----hEEEecC
Confidence 356888777653 57888999887765321 22332 122345655555777777776 444 5566777
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklI 246 (520)
+ +|+..++.+++++||+|++++|+|.++.. .+...|. +++.++++++ ++.+|++++++.+.+ ++++|
T Consensus 99 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 167 (388)
T PRK07337 99 ASAALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPSGPAERFQLTAADVEAAWGE-RTRGV 167 (388)
T ss_pred cHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCcCCHHHHHhhcCc-cceEE
Confidence 7 89999999999999999999998875421 1223454 5666667643 468999999999987 88999
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc-EEEeccCccc--CCCCceEEEe
Q 010008 247 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFF 317 (520)
Q Consensus 247 i~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD-iv~~S~hK~l--~GprgG~I~~ 317 (520)
+++.|+||+ .. ++++|.++|+++|+++++|+++ .++.+.+...+.+. +.+ +++.|++|++ +|.|.||+++
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 168 LLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 999899987 34 4678889999999999999984 45544332222222 234 4578999987 6899999999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
++ ++.+++.........+.+...+.++. .++..-....+++..+++.++++.+.+.|++.|+.+......+.+
T Consensus 247 ~~------~l~~~l~~~~~~~~~~~s~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f 319 (388)
T PRK07337 247 PE------ALVGTFEKLAQNLFICASALAQHAAL-ACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFY 319 (388)
T ss_pred CH------HHHHHHHHHHHHhccCCChHHHHHHH-HHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEE
Confidence 87 66666554332222233333344332 234321112345667778888899999998888764221234567
Q ss_pred EEEEecCC----CCCHHHHH-HHHhhcCeEEcCCCCCCCC-C-CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDK-S-ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 398 ~~vd~~~~----g~~~~~~~-~~L~~~gI~v~~~~~Pg~~-~-~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
+|++++.. .++..++. ++|+++||.+. ||.. + ....+++||+... .++++++..+.|.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----pg~~f~~~~~~~~~Ri~~~~------~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 320 VYADCRGVAHPAAGDSAALTQAMLHDAGVVLV----PGRDFGPHAPRDYIRLSYAT------SMSRLEEAVARLGKL 386 (388)
T ss_pred EEEecccccCCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCCEEEEEecC------CHHHHHHHHHHHHHH
Confidence 88888532 24555554 55788999994 4433 1 1135799998652 356777766666554
No 51
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=3.4e-24 Score=220.64 Aligned_cols=319 Identities=19% Similarity=0.188 Sum_probs=215.3
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 184 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD 184 (520)
+|.|++++...+.+ |..++.+.+++.| ++....++ +.+++++|++. .+.+++|++++.+++.++++|||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEELE----EELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHHHH----HHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 58899999998864 4443333333333 44444444 67889999863 35568999999988899999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--CCC
Q 010008 185 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYPR--DFD 258 (520)
Q Consensus 185 ~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~----~~pklIi~~~s~~p~--~~d 258 (520)
+|++.++.|.+... .....|. +++.++ .+|++++++++++ .++++++++++++++ ..|
T Consensus 87 ~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 87 LIISDSLNHASIID--------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred EEEEehhhhHHHHH--------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 99999887654321 1223444 344432 3588889988875 357788887766654 789
Q ss_pred HHHHHHHHHHhCCEEEEechhhcccccccc-----cCCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcc
Q 010008 259 YPRMRQIADAVGALLMMDMAHISGLVAASV-----VADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 333 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-----~~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~ 333 (520)
+++|+++|+++|+++|+|++|..|...... ......+.|++++|+||++. ++||+++.++ ++.+.+..
T Consensus 151 ~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~ 223 (349)
T cd06454 151 LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRS 223 (349)
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHH
Confidence 999999999999999999998777553210 01111267899999999985 4789988877 56555544
Q ss_pred cCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHH
Q 010008 334 AVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARV 412 (520)
Q Consensus 334 ~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~ 412 (520)
...+. ..++.+...++++..+++.... ++...+++.++++.+.+.|.+.|+.++.++ .+.+.++.+ ..+.+.+++
T Consensus 224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~~~-~~~~~~~~~ 299 (349)
T cd06454 224 YARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSP-SHIIPPLIG-DDPAKAVAF 299 (349)
T ss_pred hchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCcEEEEeC-CChHHHHHH
Confidence 33322 2234555566666677876543 466788899999999999988888766542 223222222 223345778
Q ss_pred HHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 413 EKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 413 ~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.+.|.+.||.+.....+. .....+.||++++... +++|++++++.|+++
T Consensus 300 ~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~ 348 (349)
T cd06454 300 SDALLERGIYVQAIRYPT--VPRGTARLRISLSAAH----TKEDIDRLLEALKEV 348 (349)
T ss_pred HHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCCC----CHHHHHHHHHHHHHh
Confidence 888888899996532111 1122468999986543 489999999998753
No 52
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=2.1e-24 Score=219.69 Aligned_cols=323 Identities=18% Similarity=0.184 Sum_probs=228.2
Q ss_pred CCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-C
Q 010008 102 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L 180 (520)
Q Consensus 102 en~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l 180 (520)
........++++..+|.+.+-.. -+++.++| +.+++++|+.+. |.+.|||.|+++++.+| +
T Consensus 10 ~p~i~~~e~~~v~~vl~sg~i~~---------G~~v~~FE----~~~ae~~G~k~a-----va~~sgT~AL~laL~al~i 71 (374)
T COG0399 10 RPSIGEEELAAVQEVLKSGWLTG---------GPFVRRFE----QAFAEYLGVKYA-----VAVSSGTAALHLALLALAI 71 (374)
T ss_pred CCCcchHHHHHHHHHHHcCCeec---------ChHHHHHH----HHHHHHhCCCeE-----EEecChHHHHHHHHHhcCC
Confidence 33456777888888887765221 25678888 578899999983 56799999999999977 7
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHH
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYP 260 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~ 260 (520)
.|||+|++++.++-++. ..+...|. +++++++|++++.+|++.||++|++ +||+|+.. +-++...|++
T Consensus 72 g~GDeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~ 139 (374)
T COG0399 72 GPGDEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMD 139 (374)
T ss_pred CCCCEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHH
Confidence 99999999998765432 24556676 9999999999999999999999999 89999873 4456678999
Q ss_pred HHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCCC
Q 010008 261 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 338 (520)
Q Consensus 261 ~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~ 338 (520)
+|.+||++||++||.|+||+.|..+.|..... ..|+.++||| |.++...||+++++++ ++.++++...+.|
T Consensus 140 ~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG 212 (374)
T COG0399 140 AIMALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHG 212 (374)
T ss_pred HHHHHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhC
Confidence 99999999999999999999999888754332 4678888877 9896669999999997 7777765433333
Q ss_pred CCC-----------C--ChH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecC--CC--CCeeEE
Q 010008 339 LQG-----------G--PHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--GS--DNHLVL 399 (520)
Q Consensus 339 ~~g-----------~--p~~-~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~--gt--~~~~~~ 399 (520)
... | ..+ ...||+. +.++ ...++..++..++++.+.+.|++. ++.+... +. .-|++.
T Consensus 213 ~~~~~~~~y~~~~~G~N~rm~~iqAAig--l~QL--~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~ 288 (374)
T COG0399 213 LSRDAVFKYLHEELGYNYRLTEIQAAIG--LAQL--ERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYT 288 (374)
T ss_pred cCCCccccceeeecccccCHHHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeE
Confidence 211 1 112 2233333 2222 334566777777788888888774 4444332 21 124444
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCC-------C-----------CCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-------A-----------LVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~-------~-----------~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
+-+...+++.+.+.+.|++.||.......|-+.. . .....+++.+ . -+++++|+++++
T Consensus 289 i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~--~--p~l~~~~~~~V~ 364 (374)
T COG0399 289 ILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL--H--PNLSEEDVDRVI 364 (374)
T ss_pred EEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC--C--CCCCHHHHHHHH
Confidence 5454445778889999999988754433442211 0 0122345432 2 257899999999
Q ss_pred HHHHHHHH
Q 010008 462 DFIHEGVE 469 (520)
Q Consensus 462 ~~i~~~l~ 469 (520)
+.|.+++.
T Consensus 365 ~~l~~~~~ 372 (374)
T COG0399 365 EALKEVLG 372 (374)
T ss_pred HHHHHHhc
Confidence 99998875
No 53
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=8.3e-24 Score=229.33 Aligned_cols=360 Identities=16% Similarity=0.107 Sum_probs=225.1
Q ss_pred hhhccccChHHHHHHHHHHHHh----hccceEecCCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHH
Q 010008 71 DYSLGEADPEVCEIITKEKERQ----FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 141 (520)
Q Consensus 71 ~~~l~~~d~~~~~~~~~e~~~~----~~~i~Liasen-----~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE 141 (520)
.+++..+.+++...+..+.++. .+.|+|..++. .+|+.+++++...+... .+|+.. .| ..++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~~---~G---~~~lR 191 (517)
T PRK13355 120 SHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSDS---KG---LFSAR 191 (517)
T ss_pred hHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---cC---hHHHH
Confidence 4556666666554333333322 25688887543 25889999988766432 245431 12 33454
Q ss_pred HHHHHHHHHHc--CCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEE
Q 010008 142 TLCQKRALAAF--NLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 218 (520)
Q Consensus 142 ~~a~~~~~~lf--g~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v 218 (520)
+...+++.+.. +++++ +|.+++|+ +++..++.++++|||+|++++|.|..+. ..+...|. +++
T Consensus 192 eaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~--------~~~~~~g~--~~v 257 (517)
T PRK13355 192 KAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT--------ACVNLAGG--TAV 257 (517)
T ss_pred HHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH--------HHHHHCCC--EEE
Confidence 44445555444 34554 67779998 8999999999999999999999875432 12344565 667
Q ss_pred EcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCC
Q 010008 219 PYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD 291 (520)
Q Consensus 219 ~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~ 291 (520)
.++++++ ++.+|++++++.+++ ++|+|++++|+||+ .++ +++|.++|+++|++||+|++ |..+++.+. +.+
T Consensus 258 ~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~-Y~~~~~~~~~~~s 335 (517)
T PRK13355 258 HYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEI-YDRLVMDGLEHTS 335 (517)
T ss_pred EeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehh-hhhhcCCCCCccc
Confidence 7777654 478999999999987 89999999999997 555 78889999999999999999 455555442 222
Q ss_pred CCC-ccc---EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 292 PFK-YCD---VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 292 p~~-~aD---iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
... ..| +++.|++|++ +|+|.||++.+.+.....++.+.++...... .+. +.....+...+|... ..+.+
T Consensus 336 ~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~q~a~~~aL~~~--~~~~~ 411 (517)
T PRK13355 336 IASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMR-LCS-NVPAQSIVQTALGGH--QSVKD 411 (517)
T ss_pred HHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCc-CCc-ChHHHHHHHHHhcCC--ccHHH
Confidence 111 123 3358999984 8999999996531100002333332211111 122 222223333345321 11222
Q ss_pred H---HHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCC---CC-HHHHHHHHhhcCeEEcCCCCCCCC-CCCC
Q 010008 366 Y---QNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMG---ID-GARVEKILDMASITLNKNSVPGDK-SALV 436 (520)
Q Consensus 366 ~---~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g---~~-~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~ 436 (520)
+ .+++.++++.+.+.|.+. |+.+..+ ..++++|+++.... .+ .+.+.++|++.||.| .||.. +...
T Consensus 412 ~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v----~pg~~F~~~~ 486 (517)
T PRK13355 412 YLVPGGRVYEQRELVYNALNAIPGISAVKP-KAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLI----VQGTGFNWDK 486 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcccCCC-CeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEE----eCcchhCCCC
Confidence 2 234556678888889875 8876654 23566676764321 12 345678899999999 45543 2224
Q ss_pred CCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 437 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 437 ~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++++||++. ..++++++.++.|.+.+.
T Consensus 487 ~~~~Ris~~------~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 487 PDHFRVVYL------PRLEDLEDAMDRLADFFS 513 (517)
T ss_pred cCEEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 679999863 347888888888887765
No 54
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1e-23 Score=220.61 Aligned_cols=357 Identities=13% Similarity=0.110 Sum_probs=226.0
Q ss_pred chhhhhccccChHHHHHHHHHHHHhhccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHH
Q 010008 68 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 145 (520)
Q Consensus 68 ~~~~~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~ 145 (520)
+++.+++.......+..+..........++|..+++. .++.+++++.+.+.+.. ..|+. ......+++...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD------SGGDVELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHH
Confidence 4445556555665555444433322356888777653 45677776554443221 12332 222235555556
Q ss_pred HHHHHHcCC--CCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 146 KRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 146 ~~~~~lfg~--~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
+++.+.+|. +++ +|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|. +++++++
T Consensus 77 ~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~ 142 (384)
T PRK06348 77 KYYSKNYDLSFKRN----EIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILET 142 (384)
T ss_pred HHHHHHhCCCCChh----hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecC
Confidence 777766665 454 56678888 89999999999999999999998865532 2233454 5666665
Q ss_pred CC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC
Q 010008 223 DE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK 294 (520)
Q Consensus 223 d~-~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~ 294 (520)
++ +++.+|++++++.+++ ++|+|+++.|+||+ .. ++++|.++|+++|++||+|++ |.++.+.+.... .+.
T Consensus 143 ~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~ 220 (384)
T PRK06348 143 YEEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEV-YDGFSFYEDFVPMATLA 220 (384)
T ss_pred CcCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecc-cccceeCCCccchhhcC
Confidence 42 3467999999998876 89999998999997 44 477888899999999999998 455554332111 111
Q ss_pred ---cccEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHH
Q 010008 295 ---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 369 (520)
Q Consensus 295 ---~aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 369 (520)
...+++.|++|++ +|.|.||+++++ ++.+.+.........+.+...+.+ .+.++... ....++..+.
T Consensus 221 ~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~------~~~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~~-~~~~~~~~~~ 292 (384)
T PRK06348 221 GMPERTITFGSFSKDFAMTGWRIGYVIAPD------YIIETAKIINEGICFSAPTISQRA-AIYALKHR-DTIVPLIKEE 292 (384)
T ss_pred CCcCcEEEEecchhccCCccccceeeecCH------HHHHHHHHHHHhccCCCCHHHHHH-HHHHHhCc-HHHHHHHHHH
Confidence 1237789999986 689999999987 676666543322112333333333 33344321 1123556667
Q ss_pred HHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCC
Q 010008 370 VVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPA 446 (520)
Q Consensus 370 i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~ 446 (520)
+.++++.+.+.|.+. |+.+..+ ..+.++|+++...+++..++.+. ++++||.+. ||+. +...+++|||++.
T Consensus 293 ~~~r~~~~~~~L~~~~~~~~~~p-~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~- 366 (384)
T PRK06348 293 FQKRLEYAYKRIESIPNLSLHPP-KGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVI----PGKAFGESGEGYIRLACT- 366 (384)
T ss_pred HHHHHHHHHHHHhcCCCceeccC-CeeEEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhccCCCCeEEEEec-
Confidence 777788888988774 6665443 23556677875445666666655 467899994 5543 2223578999863
Q ss_pred ccccCCCHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~ 466 (520)
.+++++++..+.|.+
T Consensus 367 -----~~~~~l~~al~~l~~ 381 (384)
T PRK06348 367 -----VGIEVLEEAFNRIEK 381 (384)
T ss_pred -----CCHHHHHHHHHHHHh
Confidence 235777776666643
No 55
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=7.7e-24 Score=223.09 Aligned_cols=338 Identities=15% Similarity=0.092 Sum_probs=220.9
Q ss_pred ccceEe-cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 010008 94 KSLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 172 (520)
Q Consensus 94 ~~i~Li-asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~ 172 (520)
+.+.|. .+-.++|+.|.+++..++.. |..+..+.++.+...+....+ .. +.+ +++|++++++ +...++|+++
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~-~~~-~l~g~~~~~v---~~~~~~t~~l 99 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWFTLDE-SL-LKL-RLVGAKEDEV---VVMNTLTINL 99 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChhhhhh-hh-ccc-cccCCCCCcE---EEeCCchHHH
Confidence 457887 55567899999999877643 322211112221122222222 22 335 8999988643 2234455888
Q ss_pred HHHHHhhCCCCC---EEEEcCCCCCccccccccccccccccccceEE--EEEcccCCCCCCCCHHHHHHHhhh--cCCcE
Q 010008 173 FEVYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKL 245 (520)
Q Consensus 173 ~~~l~all~pGD---~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~--~v~~~~d~~~~~iD~d~le~~i~~--~~pkl 245 (520)
..++.++++||| .|++.+.+|++.+.... ......|..+. .+.++.+ +++.+|++++++.++. .++++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYAIE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHHHH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEE
Confidence 888888877753 57766666655321110 01122343221 1233333 3578899999888752 27889
Q ss_pred EEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCceEEEeeCCCcc
Q 010008 246 IIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 323 (520)
Q Consensus 246 Ii~~~s~~p--~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~ 323 (520)
|++++.++. ...|+++|+++|+++|+++++|++|+.|.+..++... ++|++++|+||||.||.||.++..++
T Consensus 175 v~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~---gvD~~~~s~hK~l~g~pG~~l~v~~~--- 248 (406)
T TIGR01814 175 ILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDW---GVDFACWCTYKYLNAGPGAGAFVHEK--- 248 (406)
T ss_pred EEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccC---CCCEEEEcCccccCCCCCeEEEEehh---
Confidence 988866554 3889999999999999999999999999875544322 68999999999997666766666553
Q ss_pred hhhHHHhhcccC-----------C-----------CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 324 GVELESAINNAV-----------F-----------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 324 ~~~l~~~i~~~~-----------~-----------p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
.+ ..+.... | ....|+|+...++++..|++.+...+.+...++....++++.+.|
T Consensus 249 --~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 325 (406)
T TIGR01814 249 --HA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELI 325 (406)
T ss_pred --hh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 11 1111000 0 011478899999999999998876677777888888888888888
Q ss_pred HHC-----CCEEecCCC---CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEcc-CCccccCC
Q 010008 382 VEL-----GYKLVSGGS---DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PAMTTRGF 452 (520)
Q Consensus 382 ~~~-----G~~v~~~gt---~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~-~~~tt~g~ 452 (520)
.+. |++++++.. ...++.+.+. ++++++.+.|.+.||.+... .++.||+|. +.+|+
T Consensus 326 ~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~~nt--- 390 (406)
T TIGR01814 326 KARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPLYNT--- 390 (406)
T ss_pred HhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEecc---------CCCeEEEechhccCC---
Confidence 763 477776421 1234444443 46788888999999988421 246899998 55665
Q ss_pred CHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGV 468 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l 468 (520)
++|++++++.|++++
T Consensus 391 -~~did~l~~~l~~~~ 405 (406)
T TIGR01814 391 -FVDVYDAVNVLEEIL 405 (406)
T ss_pred -HHHHHHHHHHHHHHh
Confidence 899999999998754
No 56
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=2e-24 Score=223.19 Aligned_cols=299 Identities=19% Similarity=0.234 Sum_probs=211.7
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHH
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYT 177 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~-g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~ 177 (520)
++..++|+.|++++...+.+.+ +.|+.+.+. +....+.++ .+++++++++|++++ +|..++|+ +++..++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE----EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 3556889999999998886544 456543221 223333444 577899999999876 34456665 89988888
Q ss_pred hhC----CCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 010008 178 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 252 (520)
Q Consensus 178 all----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~ 252 (520)
++. ++| |.|++...+|.+...... .....|. +++.++++ +++.+|++++++.+++ ++++|++.+++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPIR-----ALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHVN 148 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence 875 366 788888777655432211 1122344 66666666 4578999999999987 89999998877
Q ss_pred CCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHH
Q 010008 253 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 329 (520)
Q Consensus 253 ~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~ 329 (520)
|++ ..|+++|.++|+++|+++++|++|+.|.+..+.... ++|++++|+||++ ||.| |+++++++ ...
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~g~l~~~~~------~~~ 218 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSAD---RIDLISCSGHKIY-GPKGIGALVIRKR------GKP 218 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcccccccc---CCCEEEeehhhcC-CCCceEEEEEccC------ccc
Confidence 775 789999999999999999999999988775443221 5899999999985 7887 99999874 211
Q ss_pred --hhcccCCC------CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEE
Q 010008 330 --AINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 401 (520)
Q Consensus 330 --~i~~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd 401 (520)
.+....+. ...|+++...++++..+++.+. .+.++..+++.++++.+.+.|.+.|++++.+.......++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~ 297 (353)
T TIGR03235 219 KAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILN 297 (353)
T ss_pred ccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEE
Confidence 12211111 1257888899999999998765 45677788899999999999988999987542222222333
Q ss_pred ecCCCCCHHHHHHHHhhcCeEEcCC
Q 010008 402 LRPMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 402 ~~~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
+...+++++++.+.|++ +|.+..+
T Consensus 298 ~~~~~~~~~~v~~~L~~-~i~v~~g 321 (353)
T TIGR03235 298 FSIDGVNSEALIVNLRA-DAAVSTG 321 (353)
T ss_pred EEeCCcCHHHHHHHHhC-CeEEEch
Confidence 43446778889999975 8998654
No 57
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.5e-23 Score=219.98 Aligned_cols=331 Identities=15% Similarity=0.159 Sum_probs=213.6
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs 169 (520)
+.|+|..+.. +.|+.+++++...+.+....+|+. .....++++...+++.+.+|.+ +++ +|.+++|+
T Consensus 36 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~---~i~vt~G~ 106 (394)
T PRK05942 36 DLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP------FEGTASFRQAITDWYHRRYGVELDPDS---EALPLLGS 106 (394)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC------CCCCHHHHHHHHHHHHHHHCCCcCCCC---eEEEccCh
Confidence 4577765432 245667787766554322234443 1223356656667787777754 431 36668887
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi 247 (520)
+|+..++.++++|||+|++++|+|.++.. .+...|. +++.++++.+ ++.+|++++++.+.+ ++|+|+
T Consensus 107 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~ 175 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILY 175 (394)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEEE
Confidence 89999999999999999999998876532 1233454 6667777644 357999999998876 899999
Q ss_pred EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC---CC---cccEEEeccCccc--CCCCceE
Q 010008 248 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 248 ~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p---~~---~aDiv~~S~hK~l--~GprgG~ 314 (520)
+++|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ +. ...+++.|++|.+ +|.|.||
T Consensus 176 l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~ 254 (394)
T PRK05942 176 FNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGF 254 (394)
T ss_pred EcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheee
Confidence 99899997 555 7788899999999999999953 44433221112 11 2347789999966 7888999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
+++++ ++.+.+.........+.+...+. ++..+++.. ....++..+++.++++.+.+.|.+.|+.+..+ ..
T Consensus 255 i~~~~------~l~~~l~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~ 325 (394)
T PRK05942 255 VVGNR------HIIQGLRTLKTNLDYGIFSALQK-AAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KA 325 (394)
T ss_pred eecCH------HHHHHHHHHHhhcccCCCHHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Ce
Confidence 99987 67666654322111222223233 333445421 22335667777888888999998888877654 23
Q ss_pred CeeEEEEecCCCCCHHH-HHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGAR-VEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~-~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+.++|+++. .+++..+ +.+.|+++||.+. ||+. +...++++||+.. .+.+.+.+.++++.
T Consensus 326 ~~f~~~~~~-~~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~---------~~~~~l~~~l~~l~ 387 (394)
T PRK05942 326 TMYLWVPCP-VGMGSTDFALNVLQKTGVVVT----PGNAFGEGGEGYVRISLI---------ADCDRLGEALDRLK 387 (394)
T ss_pred eeEEEEECC-CCCCHHHHHHHHHHHCCEEEe----CChhhCcCCCCeEEEEec---------CCHHHHHHHHHHHH
Confidence 456777774 3455555 4456788999994 4443 2223579999874 13455555555443
No 58
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.93 E-value=1.3e-23 Score=220.29 Aligned_cols=335 Identities=19% Similarity=0.202 Sum_probs=220.6
Q ss_pred ccceEecCC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 010008 94 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 170 (520)
Q Consensus 94 ~~i~Liase--n~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~ 170 (520)
+.|+|..++ .+ +++.+++++...+.. +..++++.++..|.. .+.+..++++++++|.+. +|.+++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence 457776554 22 688899998887754 333555555555542 223344478889999762 566799999
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---c--CCcE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKL 245 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~--~pkl 245 (520)
++..++.++++|||+|++.+|.|.++.. .+...+. +++.++ .+|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence 9999999999999999999987765421 2233343 333432 2588999888764 2 5777
Q ss_pred EEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEechhhcccccc-cc--cC--CCCCcccEEEeccCcccCCCCceEEEee
Q 010008 246 IIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA--DPFKYCDVVTTTTHKSLRGPRGGMIFFK 318 (520)
Q Consensus 246 Ii~~~s~~p--~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~~--~~--~p~~~aDiv~~S~hK~l~GprgG~I~~~ 318 (520)
|+.+...++ ...++++|.++|+++|++||+|++|..|.... +. .+ ...+..|++++|+||++.|+|+||++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 877643333 36799999999999999999999986664322 11 00 1112468999999999988999999998
Q ss_pred CCCcchhhHHHhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 319 KDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
+ ++.+.+.....+.. .+++....++++..+++.+. ..++..+++.++++.+.+.|.+.|+++..+ ...+
T Consensus 258 ~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 327 (397)
T PRK06939 258 K------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGPG--EHPI 327 (397)
T ss_pred H------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCE
Confidence 7 66666654322222 23333334444445566543 235677888899999999998888776543 2233
Q ss_pred EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.+.+. .+.+..++.+.|.+.||.+.....|.. +....+||++.+.. .+++|+++.++.|.++++.
T Consensus 328 ~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~~--~~~~~~iRi~~~~~----~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 328 IPVMLG-DAKLAQEFADRLLEEGVYVIGFSFPVV--PKGQARIRTQMSAA----HTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred EEEEEC-CHHHHHHHHHHHHHCCceEeeeCCCCC--CCCCceEEEEECCC----CCHHHHHHHHHHHHHHHHH
Confidence 333332 223456677777777999864322211 12246899987654 3489999999999887753
No 59
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.3e-23 Score=221.35 Aligned_cols=325 Identities=18% Similarity=0.242 Sum_probs=223.6
Q ss_pred CCCCC----hHHHHHHHhhhhhccCCCCCC-CCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 010008 101 SENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 175 (520)
Q Consensus 101 sen~~----~~~V~ea~~s~l~~~y~~G~p-~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~ 175 (520)
|.+|. .|.|++++...+...+ .+.. +..|..|.+...++| +++++++|.+. .+..+||++||.++
T Consensus 61 ~~~YL~l~~~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~sG~~An~~~ 130 (407)
T PRK07179 61 SNDYLNLSGHPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES-----CLLCQSGWAANVGL 130 (407)
T ss_pred cCCccCCCCCHHHHHHHHHHHHHhC-CCCCccccccCCchHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 55553 5899999988875432 1111 334566656666777 67889999875 25578899999999
Q ss_pred HHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 010008 176 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 255 (520)
Q Consensus 176 l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 255 (520)
+.++.++||.|++..+.|.+... .+...|. ++++++ ..|++++++++++.++++|++.++++++
T Consensus 131 l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~t 194 (407)
T PRK07179 131 LQTIADPNTPVYIDFFAHMSLWE--------GVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTT 194 (407)
T ss_pred HHHhCCCCCEEEEECCcCHHHHH--------HHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence 99999999999987665533321 1222343 444432 3699999999976458888888777665
Q ss_pred --CCCHHHHHHHHHHhCCEEEEechhhcccccc-c--cc-CCCC-CcccEEEeccCcccCCCCceEEEeeCCCcchhhHH
Q 010008 256 --DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 256 --~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~~-~~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~ 328 (520)
..|+++|+++|+++|++|++|++|..|.... + .. ..++ +.+|++++|+||+++ +++|++++++ ++.
T Consensus 195 G~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------~~~ 267 (407)
T PRK07179 195 GTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------ELA 267 (407)
T ss_pred CccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH------HHH
Confidence 8899999999999999999999997664321 1 00 1111 146999999999985 5799999987 565
Q ss_pred HhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCC
Q 010008 329 SAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGI 407 (520)
Q Consensus 329 ~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~ 407 (520)
+.+.....+.. .+++....++++..+++.... ..+..+++.++++++.+.|.+.|+++.+. .+++.+.+.. ..
T Consensus 268 ~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~~---~~i~~l~~~~-~~ 341 (407)
T PRK07179 268 EYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRSE---SQIIALETGS-ER 341 (407)
T ss_pred HHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC---CCEEEEEeCC-HH
Confidence 55543333332 345556677776667776532 24567889999999999999888876632 3555554421 12
Q ss_pred CHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 408 DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 408 ~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+...+.+.|.+.||.++.-..|+. +..++.+||+++..+ +++|++++++.|.+++..
T Consensus 342 ~~~~~~~~L~~~GI~~~~~~~p~~--~~~~~~lRis~~~~~----t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 342 NTEVLRDALEERNVFGAVFCAPAT--PKNRNLIRLSLNADL----TASDLDRVLEVCREARDE 398 (407)
T ss_pred HHHHHHHHHHHCCceEeeecCCCC--CCCCceEEEEECCCC----CHHHHHHHHHHHHHHHHh
Confidence 346677888899998653223332 223578999987654 589999999999988764
No 60
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=1.5e-23 Score=218.19 Aligned_cols=330 Identities=16% Similarity=0.146 Sum_probs=213.5
Q ss_pred ccceEec--CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcch---hHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 010008 94 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Lia--sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~---~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG 168 (520)
..|+|.+ .-+.+..++.+++..+ ..|+.+.|+-+|.. +.+.++ ..++.+++++|++.. .| ..+|
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~-----~~~~~~~~~~~g~~~~~~~~~~~-~~~e~lA~~~g~~~~----~i-~~g~ 75 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEF-----GDGYSVCDFCGGRLDQITKPPIH-DFLEDLAEFLGMDEA----RV-THGA 75 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHH-----hhccccccccccccccccchHHH-HHHHHHHHHhCCCce----EE-ECCh
Confidence 4567665 3345677777777543 34566666544432 011222 123568999999862 33 3566
Q ss_pred HHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh------c
Q 010008 169 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------F 241 (520)
Q Consensus 169 s~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~------~ 241 (520)
++++.+++.++++|||.|++..++|.+.+. .+...|. +++.++.+. .++.+|++++++.+++ .
T Consensus 76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 145 (370)
T TIGR02539 76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV--------AAERAGL--NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGK 145 (370)
T ss_pred HHHHHHHHHHhhCCCCEEEECCcccHHHHH--------HHHHcCC--EEEEEecCCcccCCcCHHHHHHHHHHhhhccCC
Confidence 699999999999999999998877644321 2344565 555555543 2578999999999864 2
Q ss_pred CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCC-CCceEEEee
Q 010008 242 RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRGGMIFFK 318 (520)
Q Consensus 242 ~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~G-prgG~I~~~ 318 (520)
++++|+++++++++ ..|+++|.++|+++|+++++|+||..|........ .+.|+++.|+||++++ .+.|+++++
T Consensus 146 ~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~---~~~di~v~s~sK~~~~~g~~G~l~~~ 222 (370)
T TIGR02539 146 PPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKE---IGADFIVGSGHKSMAASGPCGVLGMS 222 (370)
T ss_pred CcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHH---cCCCEEEeeCcccccCCCCEEEEEEC
Confidence 67899988777665 78999999999999999999999987743211110 1579999999999853 445999998
Q ss_pred CCCcchhhHHHhhcccCCCCC-------CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec-
Q 010008 319 KDPVLGVELESAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 390 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~- 390 (520)
+ ++.+.+.....|.. .++......++...++.... ...+. ..+..++++++.+.|.+.|++++.
T Consensus 223 ~------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~ 294 (370)
T TIGR02539 223 E------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKR-WDEEVKKTRWFVAELEDIGFIQLGQ 294 (370)
T ss_pred H------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhCCcEEEcc
Confidence 7 56666554332211 12222122333333454321 12222 334455567899999999998753
Q ss_pred CCCCCeeEEEEecCC-------CCCHHHHHHHHhhcCeE-EcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 391 GGSDNHLVLVDLRPM-------GIDGARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~-------g~~~~~~~~~L~~~gI~-v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
....++++++++... ..++..+.+.|.+.||. +. |+ .++.||+++. +.+++|++++++
T Consensus 295 ~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir----~~-----~~~~iRis~~-----~~t~e~i~~l~~ 360 (370)
T TIGR02539 295 KPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR----SG-----QTKYFKLSVY-----GLTKEQVEYVVD 360 (370)
T ss_pred CCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc----CC-----cceEEEEEec-----CCCHHHHHHHHH
Confidence 123466777765321 11234688889999997 42 22 2458999862 246899999999
Q ss_pred HHHHHHH
Q 010008 463 FIHEGVE 469 (520)
Q Consensus 463 ~i~~~l~ 469 (520)
.|+++++
T Consensus 361 ~L~~~~~ 367 (370)
T TIGR02539 361 SFEEIVE 367 (370)
T ss_pred HHHHHHH
Confidence 9988764
No 61
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=6.8e-24 Score=222.02 Aligned_cols=358 Identities=13% Similarity=0.112 Sum_probs=231.3
Q ss_pred hhccccChHHHHHHHHHHHHhhccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 010008 72 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 149 (520)
Q Consensus 72 ~~l~~~d~~~~~~~~~e~~~~~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~ 149 (520)
+++....+.++..+....+ ....|+|..+++. .++.+.+++...+...+ .+|+. ......+++...+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 10 SKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP------MTGVAALREAIAAKTA 81 (386)
T ss_pred hHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCcHHHHHHHHHHHH
Confidence 3344444445544433222 2355888776643 46888998887765432 23432 1123455556667888
Q ss_pred HHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCC
Q 010008 150 AAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 228 (520)
Q Consensus 150 ~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~ 228 (520)
+.+|.+.+.- .+|.+++|+ +|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++.+++.
T Consensus 82 ~~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~ 150 (386)
T PRK09082 82 RLYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPDFR 150 (386)
T ss_pred HHhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCccccc
Confidence 8889864210 146667776 89999999999999999999998765421 2334454 6777777655688
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEechhhcccccccc-cCCCC--C---ccc
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K---YCD 297 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~--~---~aD 297 (520)
+|++++++.+++ ++|+|+++.++||+ . .++++|.++|+++|+++|+|+++ ..+.+.+. .++.. . ...
T Consensus 151 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~~~ 228 (386)
T PRK09082 151 VDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRERA 228 (386)
T ss_pred CCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccCcE
Confidence 999999999987 89999998888886 2 46888999999999999999995 44444332 22211 1 234
Q ss_pred EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 298 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 298 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
+++.|++|++ +|.|.||+++++ ++.+.+.........+.+...+.+ ++..+.. .....++..+.+.++++
T Consensus 229 i~~~S~SK~~~~~G~RiG~iv~~~------~l~~~~~~~~~~~~~~~~~~~q~~-~~~~l~~-~~~~~~~~~~~~~~~~~ 300 (386)
T PRK09082 229 FVVSSFGKTYHVTGWKVGYCVAPA------ALSAEFRKVHQYNTFTVNTPAQLA-LADYLRA-EPEHYLELPAFYQAKRD 300 (386)
T ss_pred EEEeechhhccchhhhhhhhhCCH------HHHHHHHHHHhhhcCCCChHHHHH-HHHHHhC-ChHHHHHHHHHHHHHHH
Confidence 7889999987 789999999987 666655443211112222333332 3333432 12334666777888999
Q ss_pred HHHHHHHHCCCEEecCCCCCeeEEEEecC-CCCCHHHHHHH-HhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 376 ALASRLVELGYKLVSGGSDNHLVLVDLRP-MGIDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 376 ~l~~~L~~~G~~v~~~gt~~~~~~vd~~~-~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
.+.+.|.+.|+.+..+ ..+.++|++++. .+++..++.+. ++++||.+..+...+. .+...+++||+.. ..
T Consensus 301 ~~~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~-~~~~~~~~Ri~~~------~~ 372 (386)
T PRK09082 301 RFRAALANSRFKLLPC-EGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYA-DPFPHRLVRLCFA------KQ 372 (386)
T ss_pred HHHHHHHhCCCcccCC-CeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCC-CCCCCCEEEEEec------CC
Confidence 9999998888876543 235667778753 24566666665 5789999954321111 1223578999864 23
Q ss_pred HHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHE 466 (520)
Q Consensus 454 ~~d~~~la~~i~~ 466 (520)
++++++..+.|.+
T Consensus 373 ~~~l~~~~~rl~~ 385 (386)
T PRK09082 373 EETLDAAAERLCQ 385 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 6777777666643
No 62
>PRK08068 transaminase; Reviewed
Probab=99.93 E-value=2.3e-23 Score=218.28 Aligned_cols=331 Identities=16% Similarity=0.127 Sum_probs=215.3
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sGs 169 (520)
+.|+|..++. ..++.+.+++...+......+|+. ..| .+++++...+++.+.+|. ++++ +|.+++|+
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g---~~~lr~aia~~~~~~~g~~~~~~~---~i~it~G~ 103 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP---FRG---YPFLKEAAADFYKREYGVTLDPET---EVAILFGG 103 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCCc---cEEEcCCc
Confidence 4588876653 245778888887665432223432 112 345665666777776775 4431 35567877
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi 247 (520)
+++..++.++++|||+|++++|+|+.+.. .+...|. +++.++++++ ++.+|++++++.+.+ ++|+|+
T Consensus 104 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 172 (389)
T PRK08068 104 KAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAENNFLPDYTKIPEEVAE-KAKLMY 172 (389)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccccCCCCCHHHHHHhccc-cceEEE
Confidence 88888899999999999999998865432 2334565 6666777654 467899999998876 899999
Q ss_pred EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC-CC-----cccEEEeccCccc--CCCCceE
Q 010008 248 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-----YCDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 248 ~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p-~~-----~aDiv~~S~hK~l--~GprgG~ 314 (520)
++.|+||+ .++ +++|.++|+++|+++|+|+++ ..+.+.+..+.+ +. ...+++.|++|++ +|.|.||
T Consensus 173 l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 173 LNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEe
Confidence 99899997 555 467778899999999999994 344433311111 11 1237889999987 7889999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
++.++ ++.+.+.....+...+.+...+.++. .++... ....+...+++.++++.+.+.|.+.|+.+..+ ..
T Consensus 252 ~~~~~------~l~~~l~~~~~~~~~~~~~~~q~~~~-~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~-~g 322 (389)
T PRK08068 252 AVGNE------SVIEAINLLQDHLFVSLFGAIQDAAI-EALLSD-QSCVAELVARYESRRNAFISACREIGWEVDAP-KG 322 (389)
T ss_pred EecCH------HHHHHHHHHHhhccCCCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-Ce
Confidence 99877 67776654433322333333333332 233221 12346778888888999999998888876543 23
Q ss_pred CeeEEEEecCCCCCHHHHHHHHh-hcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKILD-MASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~L~-~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
+.++|+++.. +++..++.+.|. ++||.+. ||.. +...++++||+.. ..++.+++..+.|.
T Consensus 323 ~~~~~v~~~~-~~~~~~~~~~l~~~~gi~v~----pg~~f~~~~~~~iRi~~~------~~~~~l~~al~~l~ 384 (389)
T PRK08068 323 SFFAWMPVPK-GYTSEQFADLLLEKAHVAVA----PGNGFGEHGEGYVRVGLL------TDEERLREAVERIG 384 (389)
T ss_pred eEEEEEECCC-CCCHHHHHHHHHHhCCEEEe----cchHhCccCCCeEEEEEc------CCHHHHHHHHHHHH
Confidence 4566777743 456677777665 5899995 4432 2223579999874 12455555554443
No 63
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.93 E-value=3.9e-23 Score=216.19 Aligned_cols=331 Identities=16% Similarity=0.151 Sum_probs=214.6
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs 169 (520)
+.++|..+++. +++.+.+++...+.......|+. ..| .+++.+...+++.+.+|.+ +++ +|.+|+|+
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~~~---~ii~t~G~ 102 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEG---MLEFRKAVADWYKRRFGVELDPET---EVISLIGS 102 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---cHHHHHHHHHHHHHHhCCCCCCCC---cEEEccCc
Confidence 55888877763 57788999887765321223432 112 3455555667777777764 331 36668888
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi 247 (520)
+++..++.++++|||+|++++|.|..+.. .....|. +++.++++.+ .+.+|++++++.+.. ++|+|+
T Consensus 103 ~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~ 171 (385)
T PRK09276 103 KEGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMF 171 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEE
Confidence 89999999999999999999998754321 2234455 6666667644 356899999988876 899999
Q ss_pred EcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC---CC---cccEEEeccCccc--CCCCceE
Q 010008 248 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 248 ~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p---~~---~aDiv~~S~hK~l--~GprgG~ 314 (520)
+++|+||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ +. ...+++.|++|.+ +|.|.||
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 250 (385)
T PRK09276 172 INYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGF 250 (385)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhhee
Confidence 99899997 555 5788888999999999999954 44433211111 11 1237789999986 7889999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
+++++ ++.+.+.........+.+.. ...+...++... ....++..+++.++++.+.+.|++.|+.+..+ ..
T Consensus 251 ~i~~~------~l~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~ 321 (385)
T PRK09276 251 AVGNA------DLIAGLGKVKSNVDSGVFQA-IQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KA 321 (385)
T ss_pred eeCCH------HHHHHHHHHHhhccCCCCHH-HHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Cc
Confidence 99887 56665544222111222222 222223334321 12336667778888899999998888876554 23
Q ss_pred CeeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
+.++|+++. .+++..++.+. ++++||.+. ||.. ....++++||++. ..++++.+..+.|.
T Consensus 322 ~~~~~v~~~-~~~~~~~l~~~ll~~~gi~v~----~g~~f~~~~~~~~Ris~~------~~~~~l~~~l~~l~ 383 (385)
T PRK09276 322 TFYVWAPVP-KGYTSAEFATLLLDKAGVVVT----PGNGFGEYGEGYFRIALT------VPDERIEEAVERIK 383 (385)
T ss_pred ceEEEEECC-CCCCHHHHHHHHHHhCCEEEC----CchhhCCCCCCeEEEEeC------CCHHHHHHHHHHHh
Confidence 566788774 34566666555 567899994 4433 2223578999864 23566655555543
No 64
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=2.9e-23 Score=214.13 Aligned_cols=326 Identities=16% Similarity=0.141 Sum_probs=219.4
Q ss_pred EecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 010008 98 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 177 (520)
Q Consensus 98 Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~ 177 (520)
+.++...+++.|++++...+. .+. ..+.+.++ ..++.+++++|++++... .+.+.+|++++..++.
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~-~~~~~la~~~~~~~~~~~-i~~~~~gt~~l~~~~~ 68 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWC-HWD-----------SEFNDVTD-QVRDRLLALAGGDDNHTC-VLLQGSGTFAVEATIG 68 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhcc-CCC-----------HHHHHHHH-HHHHHHHHHhcCCCCCcE-EEEeCCcHHHHHHHHH
Confidence 456677789999999987332 111 12233333 456899999999864321 1235678899999999
Q ss_pred hhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCCCC-
Q 010008 178 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYPR- 255 (520)
Q Consensus 178 all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-~pklIi~~~s~~p~- 255 (520)
+++++||+|++.++.+-+.. +. ......|. +++.++++ +++.+|++++++.+++. +++++++.++++++
T Consensus 69 ~~~~~~~~vi~~~~~~~~~~---~~---~~a~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G 139 (355)
T TIGR03301 69 SLVPRDGKLLVLINGAYGER---LA---KICEYLGI--PHTDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHETTTG 139 (355)
T ss_pred hccCCCCeEEEECCCchhhH---HH---HHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCccc
Confidence 99999999887665432210 00 01223344 45555554 35789999999998762 34556655555543
Q ss_pred -CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhh
Q 010008 256 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 256 -~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i 331 (520)
..|+++|.++|+++|+++++|++|+.|... .++. ++|++++|+|||+.|+.| |++++++ ++.+.+
T Consensus 140 ~~~~~~~i~~l~~~~~~~livD~~~s~g~~~-----~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~~~~ 208 (355)
T TIGR03301 140 ILNPLEAIAKVARSHGAVLIVDAMSSFGAIP-----IDIEELDVDALIASANKCLEGVPGFGFVIARR------DLLEAS 208 (355)
T ss_pred chhHHHHHHHHHHHcCCEEEEEeccccCCcc-----cchhhcCccEEEecCCcccccCCceeEEEECH------HHHHHh
Confidence 789999999999999999999988766432 1222 589999999999977776 9999987 444443
Q ss_pred cccCC----------------CCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCC-C
Q 010008 332 NNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGG-S 393 (520)
Q Consensus 332 ~~~~~----------------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~g-t 393 (520)
..... .....+++...+.++..+++.+...+ +++..+++.++++.+.+.|.+.|++++.+. .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~ 288 (355)
T TIGR03301 209 AGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERW 288 (355)
T ss_pred hCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCC
Confidence 31100 01123566777777777888765554 677888889999999999988898866432 2
Q ss_pred CCe-eEEEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 394 DNH-LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 394 ~~~-~~~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.+. ++++.+... ..+.+++.+.|.+.||.+.. +.. ...++|||++...+ +++|++++++.|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~----~~~--~~~~~iRis~~~~~----~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 289 QSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYP----GKL--TLADTFRIGTIGEI----DAADIERLLEAIKDA 354 (355)
T ss_pred CCCcEEEEECCCCCcchHHHHHHHHHHCCEEEEC----Ccc--ccccEEEEecCCCC----CHHHHHHHHHHHHhh
Confidence 233 334554321 24556788999999999954 321 11368999975443 489999999999865
No 65
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=3.6e-23 Score=214.98 Aligned_cols=346 Identities=18% Similarity=0.165 Sum_probs=227.2
Q ss_pred ChHHHHHHHHHHHHhh--ccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC
Q 010008 78 DPEVCEIITKEKERQF--KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 155 (520)
Q Consensus 78 d~~~~~~~~~e~~~~~--~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~ 155 (520)
+.++++.+++-.+... ..| |.....+..|.+.+++...+...+ |.+. .+.+. ..+++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCccH---HHHHHHHHHHHHHHhCCC
Confidence 3456665544433321 223 444455677888999987776432 3332 23332 344456778999999987
Q ss_pred CCCCceeeecCChHHHHHHHHHhhCC----CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 010008 156 ENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 231 (520)
Q Consensus 156 ~~~~~~~V~~~sGs~A~~~~l~all~----pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 231 (520)
.+. .+...+|++||..++.++.+ +||+|++.++.|.++ . +.....|. +++.++.+ +++.+|+
T Consensus 76 ~~~---~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~---~-----~~~~~~g~--~~~~v~~~-~~~~~d~ 141 (371)
T PRK13520 76 DAY---GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSF---D-----KAADMLGV--ELRRAPLD-DDYRVDV 141 (371)
T ss_pred CCC---eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHH---H-----HHHHHcCc--eEEEecCC-CCCcCCH
Confidence 642 23345566999988876643 689999988755332 1 12234455 44455555 4578999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHhCCEEEEechhhcccccccccCC--C--CCcccEEEeccCc
Q 010008 232 DMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P--FKYCDVVTTTTHK 305 (520)
Q Consensus 232 d~le~~i~~~~pklIi~~~s~~p--~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p--~~~aDiv~~S~hK 305 (520)
++|++++++ ++++|++..++++ ...|+++|.++|+++|+++++|++|..+......... . ..++|.+++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999987 6776665544443 3889999999999999999999998755432211111 1 1268999999999
Q ss_pred ccCCC-CceEEEeeCCCcchhhHHHhhcccCCCCC--------CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 010008 306 SLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 376 (520)
Q Consensus 306 ~l~Gp-rgG~I~~~~~~~~~~~l~~~i~~~~~p~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~ 376 (520)
|+.+| ++|++++.++ ++.+.+... .|.. .|+++...++++..+++.+...+++++.++..+++++
T Consensus 221 ~~~a~~~~G~~~~~~~-----~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 221 MGLAPIPAGGILFRDE-----SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ccCccCCceEEEEcCH-----HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 87543 4566666553 455544311 1211 2334444566666778776656778889999999999
Q ss_pred HHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHH
Q 010008 377 LASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE 456 (520)
Q Consensus 377 l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d 456 (520)
+.+.|.+.|++++... ..+++.+++. +.+++.+.|.+.||.+.... .++++|++++..+ +++|
T Consensus 295 l~~~L~~~g~~~~~~~-~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~----t~ed 357 (371)
T PRK13520 295 LAEELKERGFEPVIEP-VLNIVAFDDP----NPDEVREKLRERGWRVSVTR--------CPEALRIVCMPHV----TREH 357 (371)
T ss_pred HHHHHHhCCCEEecCC-CceEEEEecC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCC----CHHH
Confidence 9999998899843322 2445555553 46788888988899985421 2468999977654 4899
Q ss_pred HHHHHHHHHHHHH
Q 010008 457 FVAIADFIHEGVE 469 (520)
Q Consensus 457 ~~~la~~i~~~l~ 469 (520)
++++++.|+++++
T Consensus 358 i~~~~~~l~~~~~ 370 (371)
T PRK13520 358 IENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999987654
No 66
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.1e-23 Score=216.62 Aligned_cols=335 Identities=16% Similarity=0.149 Sum_probs=217.2
Q ss_pred hccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 93 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 93 ~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
.+.|+|..++| +.++.+++++...+......+|+. .....++ ++.+++++|++++ +|.+++|+
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~----~v~~~~g~t 93 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDD----EALITAGAT 93 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCC----cEEEeCCHH
Confidence 35688887776 468899999988876532223332 1112333 4678889999875 45556665
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-C-CCCCCHHHHHHHhhhcCCcEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-S-TGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~-~~~iD~d~le~~i~~~~pklIi 247 (520)
+|+..++.+++++||+|++++|.|..+. ..+...|. ++++++++. + ++.+|++++++.+++ ++++|+
T Consensus 94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 162 (380)
T PRK06225 94 ESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGA--EVIEVPIYSEECNYKLTPELVKENMDE-NTRLIY 162 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCc--eEEeeccccccCCccCCHHHHHhhcCC-CceEEE
Confidence 9999999999999999999998664321 12233454 556666532 2 468999999999887 799998
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCccc--CCCCceEEEeeC
Q 010008 248 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 248 ~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l--~GprgG~I~~~~ 319 (520)
+..|+||+ .. ++++|.++|+++|+++|+|+++ .++.........+. ...+++.|++|++ +|.|.|++++++
T Consensus 163 l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~ 241 (380)
T PRK06225 163 LIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTY-RDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP 241 (380)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhH-HHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCH
Confidence 88888886 33 5889999999999999999984 23221110000011 2357788999988 477889999987
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV 398 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~ 398 (520)
++.+.+..... ...+. +....++...++... ....+...+...++++.+.+.|.+ .|+.+...+....++
T Consensus 242 ------~l~~~~~~~~~-~~~~~-~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~ 312 (380)
T PRK06225 242 ------DLIEVVKSIVI-NDLGT-NVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMM 312 (380)
T ss_pred ------HHHHHHHHHHh-cccCC-CHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEE
Confidence 66666554321 11222 222222223344331 112244445556667778888877 464332111234567
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|+++...+++..++.+.|.+.||.+..+...+ ....++++|+++. .++++++++++.|++++..
T Consensus 313 ~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~~iR~s~~------~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 313 VIDISEAGIDPEDLVEYLLERKIFVRQGTYTS--KRFGDRYIRVSFS------IPREQVEVFCEEFPDVVET 376 (380)
T ss_pred EEEcccccCCHHHHHHHHHHCCEEEcCCcccC--cCCCCceEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence 88876556778888888889999995432111 1234578999864 2479999999999988763
No 67
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=5.8e-23 Score=215.36 Aligned_cols=338 Identities=17% Similarity=0.171 Sum_probs=220.2
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
..|+|..+++. +++.+.+++...+...+. .|+ .....+.+++.+.+++.+.+|+..+.. -+|.+++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~ 102 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HYT------GMAGLLELRQAAADFVKEKYNLDYAPE-NEILVTIGATE 102 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CCC------CCCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHH
Confidence 46777766653 467788888876653321 232 222245677677778877777742210 156678887 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 248 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~ 248 (520)
|+.+++.++++|||+|++.+|.|+++.. .+...|. +++.++.++.++.+|+++++++++.. ++|+|++
T Consensus 103 al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l 172 (391)
T PRK07309 103 ALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVIL 172 (391)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEE
Confidence 9999999999999999999998876531 2334555 56666666445689999999988642 5899999
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCccc--CCCCceEEEe
Q 010008 249 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL--RGPRGGMIFF 317 (520)
Q Consensus 249 ~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l--~GprgG~I~~ 317 (520)
+.|+||+ .. ++++|.++|+++|+++++|+++ ..+.+.+....++. .--+++.|++|++ +|.|.||+++
T Consensus 173 ~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~ 251 (391)
T PRK07309 173 NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA 251 (391)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe
Confidence 8889887 34 4888999999999999999984 45554332111221 1227889999986 7899999999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
++ ++.+++.........+.+.. ...++..+++.. ........+++.++++.+.+.|.+.|+.+..+. .+.+
T Consensus 252 ~~------~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~-gg~~ 322 (391)
T PRK07309 252 PA------EFTAQLIKSHQYLVTAATTM-AQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPD-GAFY 322 (391)
T ss_pred CH------HHHHHHHHHHhhcccCCChH-HHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCC-eeEE
Confidence 87 66666654321111222222 233333344321 112244556778888889999988888776542 2455
Q ss_pred EEEEecCC-CCCHHHHH-HHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPM-GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 398 ~~vd~~~~-g~~~~~~~-~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+|+++... +.+..++. +++++.||.+ .||.. +...+++|||++.. ..+++++..+.|.++++
T Consensus 323 ~~~~l~~~~~~~~~~~~~~l~~~~gv~v----~pg~~f~~~~~~~iRi~~~~------~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 323 IFAKIPAGYNQDSFKFLQDFARKKAVAF----IPGAAFGPYGEGYVRLSYAA------SMETIKEAMKRLKEYME 387 (391)
T ss_pred EEEECCCCCCCCHHHHHHHHHHhCCEEE----eCchhhCCCCCCEEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 56666431 22445555 5567899999 45543 23346799998652 35788888888877664
No 68
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=1.8e-23 Score=216.78 Aligned_cols=311 Identities=17% Similarity=0.153 Sum_probs=206.7
Q ss_pred CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 180 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all 180 (520)
+-+++|+.|+++|.....+ | +. .+++.+.++++++++||++. + +.+.+|++|+++++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence 4456899999999887643 2 21 23344456688999999874 2 444667799999999999
Q ss_pred CCCC---------------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 010008 181 KPHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 181 ~pGD---------------~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pkl 245 (520)
+||| +|+++.+.+. ++ +. +....+.+.|. +++.++++ +.+|++++++++++ +||+
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~-~~--~~-~~~~~~~~~g~--~~v~v~~~---~~~d~~~le~ai~~-~t~a 151 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNV-DY--GA-PVETMVRLGGG--KVVEAGYA---NECSAEQLEAAITE-KTAA 151 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccch-hc--CC-chHHHHHhcCC--eEEEEcCC---CCCCHHHHHHhcCh-hceE
Confidence 9998 7777653221 11 00 00112334554 66666553 56999999999998 8997
Q ss_pred EE-EcCCCCC-C-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcccCCCCceEEEeeCCC
Q 010008 246 II-AGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 321 (520)
Q Consensus 246 Ii-~~~s~~p-~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~GprgG~I~~~~~~ 321 (520)
|+ +++++++ + ..|+++|.++|+++|+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 152 i~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~-- 223 (363)
T TIGR01437 152 ILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK-- 223 (363)
T ss_pred EEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH--
Confidence 76 4454443 3 7899999999999999999999986221 11112 5899999999999999999998876
Q ss_pred cchhhHHHhhcccCCC---CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecC--CC--
Q 010008 322 VLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GS-- 393 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~--gt-- 393 (520)
++.+.+...... ..+.+ ...++++..|++.+...+ .+..++..++++.+.+.|.+ .|+.+... ..
T Consensus 224 ----~~i~~~~~~~~~~~~~~~~~--~~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~ 296 (363)
T TIGR01437 224 ----KYIEWVKLQSKGIGRAMKVG--KENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGR 296 (363)
T ss_pred ----HHHHHHHhccCCCcceeccC--HHHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCC
Confidence 555544221111 11111 123677777887765322 33444555677889999988 58887632 11
Q ss_pred --CCeeEEEEecCCCCCHHHHHHHHhhcC--eEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 394 --DNHLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 394 --~~~~~~vd~~~~g~~~~~~~~~L~~~g--I~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
+...+.++....++++.++.+.|.+.| |.++.. ....+.+|++... ++++|++.++++++++
T Consensus 297 ~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~-------~~~~~~~~l~~~~-----~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 297 DIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGY-------KANEGIIEIDPRS-----VTGGQLDIIVERIREI 362 (363)
T ss_pred cCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeee-------eecCCeEEEEeec-----CCHHHHHHHHHHHHHh
Confidence 112233444335788999999998767 666432 1235678887653 5589999999999875
No 69
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=3.6e-23 Score=216.63 Aligned_cols=336 Identities=13% Similarity=0.131 Sum_probs=220.6
Q ss_pred hccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 010008 93 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 168 (520)
Q Consensus 93 ~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sG 168 (520)
.+.|+|..+++ +.++.+.+++...+.+.+ .+|+. .....++++...+++.+.+|+ +++ .+|.+++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~~---~~I~~t~G 97 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH------NAGLLELRKAACNFVKDKYDLHYSPE---SEIIVTIG 97 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCC---CcEEEeCC
Confidence 35578877654 346788899888776432 23332 122346666666777666676 343 14556777
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi 247 (520)
+ +|+.+++.+++++||+|++++|.|.++.. .+...|. ++++++++.+++.+|.+++++.+++ ++|+|+
T Consensus 98 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~ 166 (387)
T PRK07683 98 ASEAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVV 166 (387)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEE
Confidence 6 99999999999999999999997765421 2334454 6777777755677899999999877 899999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-----cccEEEeccCccc--CCCCceEE
Q 010008 248 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMI 315 (520)
Q Consensus 248 ~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-----~aDiv~~S~hK~l--~GprgG~I 315 (520)
+..++||+ .. ++++|.++|+++|+++|+|+++. .+.+.+....... .-.+++.|++|.+ +|.|.||+
T Consensus 167 i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i 245 (387)
T PRK07683 167 LPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFL 245 (387)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEE
Confidence 99999987 33 47889999999999999999954 4443322111111 1247889999987 78899999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 395 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~ 395 (520)
++++ ++.+++.........+.+...+.++ ...+..- ....+...+++.++++.+.+.|.+.|+.+..+ ..+
T Consensus 246 ~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~ 316 (387)
T PRK07683 246 FAPS------YLAKHILKVHQYNVTCASSISQYAA-LEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGA 316 (387)
T ss_pred EcCH------HHHHHHHHHHHhccCCCChHHHHHH-HHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-Cee
Confidence 9987 5666554321111112222322222 2234321 12235556777888889999998888776544 234
Q ss_pred eeEEEEecCCCCCHHHH-HHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~-~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.|+.+...+++..++ .++|+++||.+. ||.. +...++++||++. .+++++++..+.|.+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~----pg~~f~~~~~~~~Ri~~~------~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 317 FYLFPSIGHFTMSSFDFALDLVEEAGLAVV----PGSAFSEYGEGYVRLSYA------YSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEc----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 55566665434555554 456789999994 4443 2234679999864 247888888888887765
No 70
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=6.5e-23 Score=214.61 Aligned_cols=334 Identities=14% Similarity=0.080 Sum_probs=217.6
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
..|+|..+++. .++.+.+++.+.+.+.....|+. ..| ..++++.+.+++.+.+|..... -+|.+++|+ +
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEG---LPELREAYAAHYSRLYGAAISP--EQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 45778777753 46788888887764322222321 112 3466666667888887854321 256678886 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
|+..++.++++|||+|++++|.|.++.. .+...|. ++++++++++ ++.+|.+++++++++ ++++|++.
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~ 170 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAIALV 170 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEEe
Confidence 9999999999999999999998765531 2234454 6777777643 467899999999987 89998888
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCC-CCC----cc-cEEEeccCccc--CCCCceEEE
Q 010008 250 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK----YC-DVVTTTTHKSL--RGPRGGMIF 316 (520)
Q Consensus 250 ~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~-p~~----~a-Div~~S~hK~l--~GprgG~I~ 316 (520)
.|+||+ ..+ +++|.++|+++|+++|+|+++ .++...+..+. .+. +. .+++.|++|++ +|.|.||++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~ 249 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETY-RDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVV 249 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccc-hhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeee
Confidence 888987 444 788999999999999999984 34433221111 111 11 36789999987 588999999
Q ss_pred eeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCC
Q 010008 317 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 395 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~ 395 (520)
+++ ++.+.+.........+.+...+. +++.++... ....++..+++.++++.+.+.|.+. ++.+... ..
T Consensus 250 ~~~------~~~~~~~~~~~~~~~~~s~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--g~ 319 (386)
T PRK07550 250 ASP------ARIAEIEKFMDTVAICAPRIGQI-AVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLAS--GA 319 (386)
T ss_pred cCH------HHHHHHHHHHhhcccCCCcHHHH-HHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCCC--ce
Confidence 987 56655554332222222233222 333344321 1222455667778888899999873 6655432 34
Q ss_pred eeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
.++|+.+...+++..++.+. +++.||.+. ||.. +....+++||++.. ..++++++..+.|.+
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~~-----~~~~~~~~~~~~l~~ 383 (386)
T PRK07550 320 YFAYVRHPFPDRPSREVARRLAKEAGILCL----PGTMFGPGQEGYLRLAFAN-----ADVAGIGELVERLRA 383 (386)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhcCEEEe----CchhhCCCCCCEEEEEeec-----CCHHHHHHHHHHHHh
Confidence 66677765335667776665 578999994 4432 22235689998743 236888888887764
No 71
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=2.4e-23 Score=219.26 Aligned_cols=344 Identities=16% Similarity=0.178 Sum_probs=221.9
Q ss_pred ceEe-cCCCCChHHHHHHHhhhhh--ccCCCCCCCCCCC-CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 010008 96 LELI-ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 171 (520)
Q Consensus 96 i~Li-asen~~~~~V~ea~~s~l~--~~y~~G~p~~ryy-~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A 171 (520)
+.|. ++..++|+.|++++...+. +.+ +.|+.+-+ .+....+.++ .+++++++++|++++++ +...+|++|
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~v---~~~~g~t~a 78 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPREI---VFTSGATES 78 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCeE---EEeCCHHHH
Confidence 4444 3456889999999988876 444 23332111 1111112233 45678999999987632 233455689
Q ss_pred HHHHHHhh----CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 010008 172 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 172 ~~~~l~al----l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi 247 (520)
+..++.++ +++||+|++.+++|.+...... .+...|. +++.++++ +++.+|+++|++++++ ++++|+
T Consensus 79 l~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~-----~~~~~g~--~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~ 149 (404)
T PRK14012 79 DNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCR-----QLEREGF--EVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVS 149 (404)
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHH-----HHHhCCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEE
Confidence 88887766 4799999999887755432211 1112354 56666666 4688999999999987 899998
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcch
Q 010008 248 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 324 (520)
Q Consensus 248 ~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~ 324 (520)
+...+|++ ..|+++|.++|+++|+++++|++|+.|....+.... ++|++++|+||.+ ||.| |+++++++
T Consensus 150 ~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~---~~D~~~~s~~K~~-gp~g~G~l~~~~~---- 221 (404)
T PRK14012 150 IMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKL---KVDLMSFSAHKIY-GPKGIGALYVRRK---- 221 (404)
T ss_pred EECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccC---CCCEEEEehhhcc-CCCceEEEEEecC----
Confidence 88777665 789999999999999999999999887654332211 5899999999954 7766 88888763
Q ss_pred hhHHHhhcccCCC------CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCC--CC
Q 010008 325 VELESAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS--DN 395 (520)
Q Consensus 325 ~~l~~~i~~~~~p------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt--~~ 395 (520)
...++...... ...|+++...+.++..|++.+. .+.++..++..+.++++.+.|.+ .++.+..... ..
T Consensus 222 --~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~ 298 (404)
T PRK14012 222 --PRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP 298 (404)
T ss_pred --CCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 11122111000 1246677888888888887654 34566677778888888888876 4566543211 12
Q ss_pred eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC------------CCCCCCEEEEccCCccccCCCHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK------------SALVPGGIRIGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~------------~~~~~~giRig~~~~tt~g~~~~d~~~la~~ 463 (520)
+..++.+.. .++..+...|++.+|.....+.|... .....+.||++++..++ ++|++++++.
T Consensus 299 ~~~~~~~~~--~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t----~~dvd~~~~~ 372 (404)
T PRK14012 299 GNLNVSFNY--VEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTT----EEEIDYAIEL 372 (404)
T ss_pred CEEEEEEeC--cCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHHHHH
Confidence 222222221 23456666665444443322233211 01124789999987654 8999999999
Q ss_pred HHHHHHHH
Q 010008 464 IHEGVEIT 471 (520)
Q Consensus 464 i~~~l~~~ 471 (520)
|+++++..
T Consensus 373 l~~~~~~~ 380 (404)
T PRK14012 373 VRKSIGKL 380 (404)
T ss_pred HHHHHHHH
Confidence 99987754
No 72
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=8e-23 Score=207.91 Aligned_cols=340 Identities=16% Similarity=0.142 Sum_probs=245.0
Q ss_pred cceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 010008 95 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 174 (520)
Q Consensus 95 ~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~ 174 (520)
.+-|+++...+++.|++||.....+.++ .++.+.++ .+.+.++..|+.+.. + +.+...||+.|+.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~~-~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIMK-EVLEKLRKVFGTENG-D-VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHHH-HHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHH
Confidence 3678899999999999999876655432 23445554 456789999999842 2 45667889999999
Q ss_pred HHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 010008 175 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 253 (520)
Q Consensus 175 ~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-~pklIi~~~s~~ 253 (520)
++.++++|||+||+...- .+.+.+. ..+...|. +++.+... ....+|++++++++++. ..++|.+.+.-.
T Consensus 72 av~sl~~pgdkVLv~~nG---~FG~R~~---~ia~~~g~--~v~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVVNG---KFGERFA---EIAERYGA--EVVVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEeCC---hHHHHHH---HHHHHhCC--ceEEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 999999999999998752 2322321 12344555 44444343 45689999999999852 356777765544
Q ss_pred CC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCC------c--
Q 010008 254 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP------V-- 322 (520)
Q Consensus 254 p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~------~-- 322 (520)
++ ..|+++|+++|++||+++++|+.-+.|......... +.|+++++.+|+|.+|.| |++..+++. .
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~w---giDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~ 219 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEW---GIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKH 219 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhc---CccEEEecCchhccCCCccceeEECHHHHHHHhcCCC
Confidence 44 779999999999999999999876666543332222 699999999999999999 999988741 0
Q ss_pred --chhh---HHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCC-CCCe
Q 010008 323 --LGVE---LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SDNH 396 (520)
Q Consensus 323 --~~~~---l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g-t~~~ 396 (520)
...+ +.+..++. ..+..+|..+.+.|+..||+.+..++++++.+++..+++++.+.+.+.|++++... ..+.
T Consensus 220 ~~~ylDL~~~~~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~ 297 (383)
T COG0075 220 PSFYLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSP 297 (383)
T ss_pred CceeecHHHHHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCC
Confidence 0111 22222221 23345789999999999999999888999999999999999999999999988732 1222
Q ss_pred eEEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+..-..+.++++.++.. .++++||.+..+ .++.....+|||+... ...+|+...+.+|..++...
T Consensus 298 tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg-----~~~l~gkifRIGhMG~----~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 298 TVTAIKVPEGVDDKKVRRALLKEYGVEIAGG-----QGPLKGKIFRIGHMGN----VRPEDVLAALAALEAALREL 364 (383)
T ss_pred ceEEEECCCCCCcHHHHHHHHHhCCEEeccc-----ccccCccEEEEecCcc----CCHHHHHHHHHHHHHHHHHc
Confidence 233334467777655444 667789998432 2345567899998752 56899999999999998754
No 73
>PRK07324 transaminase; Validated
Probab=99.93 E-value=1.6e-23 Score=218.12 Aligned_cols=327 Identities=19% Similarity=0.174 Sum_probs=211.4
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHc-CCCCCCCceeeecCChH-
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lf-g~~~~~~~~~V~~~sGs- 169 (520)
+.++|..+|. .+++.+ +++...+.+.. .+|.. ..|. .+++ +.+++++ +++++ +|.+++|+
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~Y~~---~~G~---~~lr----~~ia~~~~~~~~~----~vi~t~G~~ 90 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LTYGW---IEGS---PEFK----EAVASLYQNVKPE----NILQTNGAT 90 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-ccCCC---CCCC---HHHH----HHHHHHhcCCChh----hEEEcCChH
Confidence 4566766664 356666 76665554321 13332 1232 3444 4455555 46665 55567777
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~-~~iD~d~le~~i~~~~pklIi~ 248 (520)
+|+.+++.++++|||+|+++.|.|..+.. .+...|. +++.+++++++ +.+|++++++.+++ ++|+|++
T Consensus 91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i 159 (373)
T PRK07324 91 GANFLVLYALVEPGDHVISVYPTYQQLYD--------IPESLGA--EVDYWQLKEENGWLPDLDELRRLVRP-NTKLICI 159 (373)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence 99999999999999999999987654321 2234454 66677776543 56899999998887 8999999
Q ss_pred cCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCCc--ccEEEeccCccc--CCCCceEEEeeC
Q 010008 249 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY--CDVVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 249 ~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~--aDiv~~S~hK~l--~GprgG~I~~~~ 319 (520)
++|+||+ ..+ +++|.++|+++|+++++|++ |.++...+..++.... ..|++.|++|++ +|+|.||+++++
T Consensus 160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~-y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEV-YRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 9999987 566 88899999999999999998 4566554322222221 237889999986 699999999976
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV 398 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~ 398 (520)
++.+++.+.......+.+...+.++. .+++.. ....+...+.+.++++.+.+.|.+. ++.++.+. ...+.
T Consensus 239 ------~li~~~~~~~~~~~~~~~~~~q~~a~-~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~-gg~~~ 309 (373)
T PRK07324 239 ------EVIDILRKYRDYTMICAGVFDDMLAS-LALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPK-AVSTS 309 (373)
T ss_pred ------HHHHHHHHHhCcEEecCChHHHHHHH-HHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCC-ceEEE
Confidence 67776655432222233333344333 234321 1123555666777888888888774 66655442 23344
Q ss_pred EEEecCCCCCHHHHH-HHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~-~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.+.. +++..++. ++|+++||.+ .||... ..++++||+.. ..++.+++..+.|.+.+.
T Consensus 310 ~i~~~~-~~~~~~~~~~ll~~~gv~v----~pg~~F-~~~~~iRis~~------~~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 310 FVKLDV-DMPSEDFCLKLLKETGVLL----VPGNRF-DLEGHVRIGYC------CDTETLKKGLKKLSEFLR 369 (373)
T ss_pred EEEeCC-CCCHHHHHHHHHHhcCEEE----ECcccc-CCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 555532 34555554 5567899999 555531 13579999863 236777777777777664
No 74
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=6.6e-23 Score=214.63 Aligned_cols=359 Identities=15% Similarity=0.138 Sum_probs=226.7
Q ss_pred ccccChHHHHHHHHHHHHhhccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 74 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 74 l~~~d~~~~~~~~~e~~~~~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
+....+..+..+.+... ....|+|..+.. ..|+.+.+++...+.+.. .+|+. ..| ..++++...+++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~---~~G---~~~lr~~ia~~~~~~ 79 (387)
T PRK08912 8 FADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP---MMG---LPELRQAVAAHYARF 79 (387)
T ss_pred HhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCC---cHHHHHHHHHHHHHH
Confidence 44444444444433332 134577765443 346778888776654332 23433 122 235555666777777
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC
Q 010008 152 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 230 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD 230 (520)
+|.+.+.. .+|.+++|+ +|+.+++.++++|||+|++++|.|.++.. .+...|. +++.++++++++.+|
T Consensus 80 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~ 148 (387)
T PRK08912 80 QGLDLDPE-TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWRLP 148 (387)
T ss_pred hCCCCCCc-ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCcCC
Confidence 78642211 145667776 89999999999999999999998765421 2334455 566666765567899
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC---C---CcccEE
Q 010008 231 YDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---KYCDVV 299 (520)
Q Consensus 231 ~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p---~---~~aDiv 299 (520)
++++++.+.. ++|+|++++++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+....+ + ...+++
T Consensus 149 ~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~ 226 (387)
T PRK08912 149 RAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERTVK 226 (387)
T ss_pred HHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCceEE
Confidence 9999999877 89999999999997 454 6778899999999999999954 44433211111 1 124588
Q ss_pred EeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 010008 300 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 377 (520)
Q Consensus 300 ~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l 377 (520)
+.|++|.+ +|.|.||+++++ ++.+.+.........+.+...+ +++..++... ...+++..+++.++++.+
T Consensus 227 ~~S~SK~~g~~GlRiG~~~~~~------~~~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l 298 (387)
T PRK08912 227 IGSAGKIFSLTGWKVGFVCAAP------PLLRVLAKAHQFLTFTTPPNLQ-AAVAYGLGKP-DDYFEGMRADLARSRDRL 298 (387)
T ss_pred EeechhhccCcCceeEEEecCH------HHHHHHHHHHhhccccCChHHH-HHHHHHHhCC-HHHHHHHHHHHHHHHHHH
Confidence 99999985 788899999987 5665554332221122222222 2333344321 123366778888899999
Q ss_pred HHHHHHCCCEEecCCCCCeeEEEEecCCC--CCHHHHHHH-HhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCH
Q 010008 378 ASRLVELGYKLVSGGSDNHLVLVDLRPMG--IDGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 454 (520)
Q Consensus 378 ~~~L~~~G~~v~~~gt~~~~~~vd~~~~g--~~~~~~~~~-L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~ 454 (520)
.+.|.+.|+.+..+ ..++++|+++...+ .+..++.+. +++.||.+..+...+. ....++++||++.. .+
T Consensus 299 ~~~L~~~g~~~~~~-~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~-~~~~~~~iRl~~~~------~~ 370 (387)
T PRK08912 299 AAGLRRIGFPVLPS-QGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYE-EDPVTSVVRFCFAK------RD 370 (387)
T ss_pred HHHHHhCCCcccCC-CcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCC-CCCCCCEEEEEEeC------CH
Confidence 99999888876654 23566777775422 355555555 5789999954321110 11135789998652 36
Q ss_pred HHHHHHHHHHHHHHH
Q 010008 455 KEFVAIADFIHEGVE 469 (520)
Q Consensus 455 ~d~~~la~~i~~~l~ 469 (520)
+++++..+.|.++++
T Consensus 371 ~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 371 ATLDEAVERLAAARR 385 (387)
T ss_pred HHHHHHHHHHHHHHh
Confidence 778888877776654
No 75
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.93 E-value=4e-23 Score=213.36 Aligned_cols=327 Identities=13% Similarity=0.093 Sum_probs=215.5
Q ss_pred ceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH-H
Q 010008 96 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-P 170 (520)
Q Consensus 96 i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs-~ 170 (520)
++|..+++ ++++.+.+++.+.... ...|+. ..| ...+++...+++.+.+|++ ++ .+|.+|+|+ +
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~~---~~Iiit~Gs~~ 71 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPS---ALG---TKALREAISGWFERRFGVKLDPD---AQVLPSAGSKE 71 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCC---CcEEEcCChHH
Confidence 34444443 3578888888876432 223433 112 3456666667777777854 42 156779998 8
Q ss_pred HHHHHHHhhCCCC---CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEE
Q 010008 171 ANFEVYTAILKPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 171 A~~~~l~all~pG---D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklI 246 (520)
|+..++.++++|| |+|++++|.|.++.. .+...|. +++.++++++ ++.+|++++++++.+ ++|+|
T Consensus 72 ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i 140 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRRRVIFGTPGYPVYER--------GALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIV 140 (350)
T ss_pred HHHHHHHHHcCCCCCCceEEEcCCCCcchHH--------HHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEE
Confidence 9999999999988 699999997765432 3345565 6777777643 456999999999887 89999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cc--cEEEeccCccc--CCCCceEEE
Q 010008 247 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC--DVVTTTTHKSL--RGPRGGMIF 316 (520)
Q Consensus 247 i~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~a--Div~~S~hK~l--~GprgG~I~ 316 (520)
+++.++||+ ..+ +++|.++|+++|+++|+|+++. .+...+..++... .. .+++.|++|++ +|.|.||++
T Consensus 141 ~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~ 219 (350)
T TIGR03537 141 WINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVA 219 (350)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeee
Confidence 999899997 566 8888899999999999999854 3332221111111 12 37788999986 788999999
Q ss_pred eeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe
Q 010008 317 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 396 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~ 396 (520)
.++ ++.+++.....+...+.+...+.++. .++.. ....++.++++.++++.+.+.|.+.|+.+..+ ..+.
T Consensus 220 ~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~ 289 (350)
T TIGR03537 220 GDE------KLISFLRKLRANFGVASPDFVQAAAK-AAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATF 289 (350)
T ss_pred cCH------HHHHHHHHHHHhhccCCCHHHHHHHH-HHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEE
Confidence 876 56666654332222333333233222 23321 22235667778888888999998888876544 2355
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
++|+++. .+++...+.+.|.++||.+. ||.. +....+++||++. .+++++++..+.|.+
T Consensus 290 ~~~~~~~-~~~~~~~l~~~L~~~gv~v~----~g~~f~~~~~~~~Ri~~~------~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 290 YLWVKVP-SGIDAKDYALRLLENGIVVA----PGENFGSGEEGYVRVALV------PTLEECEEALRLWER 349 (350)
T ss_pred EEEEECC-CCCCHHHHHHHHHHCCEEEc----CchhhCCCCCCEEEEEec------CCHHHHHHHHHHHhc
Confidence 6777775 34566778888888999994 4443 2223578999863 236788777766653
No 76
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=5.9e-23 Score=217.61 Aligned_cols=345 Identities=14% Similarity=0.091 Sum_probs=221.3
Q ss_pred ccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 010008 94 KSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 167 (520)
Q Consensus 94 ~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~s 167 (520)
+.|+|..++. .+++.+.+++...+......+|+.. .| ..++++...+++.+.+|.+.+. -+|.+++
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~---~G---~~~lr~aia~~~~~~~~~~~~~--~~v~it~ 124 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC---VG---LLPARRAIAEYLSRDLPYELST--DDIYLTA 124 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC---cc---CHHHHHHHHHHHhhccCCCCCh--hhEEEeC
Confidence 5677776653 3578899999888765433345431 12 3455555556665555554221 2566788
Q ss_pred hH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcE
Q 010008 168 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 168 Gs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pkl 245 (520)
|+ +|+.+++.++++|||+|++++|.|..+.. ...+.|. +++.+++.++ ++.+|++++++++++ ++++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 193 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGL--EVRHFDLLPERGWEVDLEGVEALADE-NTVA 193 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeeCCcccCCcCCHHHHHHHhCc-CceE
Confidence 87 99999999999999999999997765321 2234455 5556655433 578999999999887 8999
Q ss_pred EEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---Cc--ccEEEeccCcc--cCCCCce
Q 010008 246 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKS--LRGPRGG 313 (520)
Q Consensus 246 Ii~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~~--aDiv~~S~hK~--l~GprgG 313 (520)
|++++|+||+ ..+ +++|.++|+++|++||+|++ |..+++.+....++ .. .-+++.|++|+ ++|+|.|
T Consensus 194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG 272 (430)
T PLN00145 194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEV-YDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272 (430)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecc-chhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEE
Confidence 9999999997 555 77888889999999999998 45555543211222 11 12778999998 4899999
Q ss_pred EEEeeCCCcch--hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEec
Q 010008 314 MIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 390 (520)
Q Consensus 314 ~I~~~~~~~~~--~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~ 390 (520)
|++...+.... .++.+.+..... ....++....+++..+|+.-....+++..+++.++++.+.+.|++. |+.+..
T Consensus 273 ~iv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 350 (430)
T PLN00145 273 WIATCDPNGILKETKVVDSIRNYLN--ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH 350 (430)
T ss_pred EEEEecchhhhhhhHHHHHHHHHhc--ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99985321000 011222322211 1122222233333444543112335777888999999999999874 776542
Q ss_pred CCCCCeeEEEEecCC---CC-CH-HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 391 GGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~---g~-~~-~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
......++|+++... +. +. +.+.++|++.||.+ .||.... .++++||+.. ..++++++..+.|.
T Consensus 351 ~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~fg-~~~~lRis~~------~~~~~l~~al~rl~ 419 (430)
T PLN00145 351 KPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVV----LPGSALG-MKNWLRITFA------IDPPSLEDGLERLK 419 (430)
T ss_pred CCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEE----eCccccC-CCCeEEEEeC------CCHHHHHHHHHHHH
Confidence 223456778776421 22 33 45667888999999 5655311 2579999864 24677888888887
Q ss_pred HHHHHH
Q 010008 466 EGVEIT 471 (520)
Q Consensus 466 ~~l~~~ 471 (520)
+.+...
T Consensus 420 ~~~~~~ 425 (430)
T PLN00145 420 SFCLRH 425 (430)
T ss_pred HHHHHh
Confidence 777543
No 77
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.4e-23 Score=213.20 Aligned_cols=318 Identities=15% Similarity=0.143 Sum_probs=217.1
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
..+.|..+++. +|+.+.+++...+......+|+. .. ...++ +.++++++++++ +|.+++|+ +
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~------~~-~~~lr----~~ia~~~~~~~~----~i~it~G~~~ 87 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD------PT-AEKLR----EELARYCSVVPT----NIFVGNGSDE 87 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC------cc-HHHHH----HHHHHHhCCCcc----cEEEecCHHH
Confidence 34677777764 68999999887664322223332 11 23343 567778899876 56678998 7
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++++|.|.++.. .....|. +++.++++ +++.+|++++++.++..++|+|++++
T Consensus 88 ~l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~ 156 (351)
T PRK14807 88 IIHLIMLAFINKGDVVIYPHPSFAMYSV--------YSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCN 156 (351)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 8888999999999999999987753311 1233454 66677676 45789999999999766899999999
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-c-ccEEEeccCccc--CCCCceEEEeeCCCcch
Q 010008 251 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~-aDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 324 (520)
++||+ ..+.+++.++|++++.++++|+++. ++. .......+. . -.+++.|++|++ +|.|.||+++++
T Consensus 157 p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~----- 229 (351)
T PRK14807 157 PNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE----- 229 (351)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH-----
Confidence 99987 7899999999999899999999963 332 111111111 1 237889999986 789999999977
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEec
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~ 403 (520)
++.+.+.....+. ..+...+.+ +..+++. ..+++..+.+.++++.+.+.|.+ .|+.+..+ ...++|+++.
T Consensus 230 -~~~~~~~~~~~~~--~~~~~~q~~-~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~~~~~i~~~ 300 (351)
T PRK14807 230 -NILKYLNLVKSPY--NINSLSQVI-ALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS--KTNFILVKFK 300 (351)
T ss_pred -HHHHHHHHccCCC--CcCHHHHHH-HHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--CccEEEEEcC
Confidence 6777665433222 122232332 2223432 34566677788888889999977 48776543 2445677664
Q ss_pred CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 404 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 404 ~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+.+++.+.|.++||.+.. +......++++||++. ..++++++.+.|++++
T Consensus 301 ----~~~~~~~~l~~~gV~v~~----~~~~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 ----DADYVYQGLLERGILVRD----FSKVEGLEGALRITVS-------SCEANDYLINGLKELL 350 (351)
T ss_pred ----CHHHHHHHHHHCCEEEEE----CCCCCCCCCeEEEEcC-------CHHHHHHHHHHHHHhh
Confidence 457788888889999953 2211123578999864 2688899998887653
No 78
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.93 E-value=3.9e-23 Score=213.45 Aligned_cols=327 Identities=20% Similarity=0.193 Sum_probs=217.3
Q ss_pred ccceEecCCC---CChHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 94 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen---~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~-~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
+.|+|..+++ ..++.|++++...+. +|..++++.++..|. +..++++ +.+++++|.+. +|.+++|+
T Consensus 17 ~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~ 86 (360)
T TIGR00858 17 RLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEELE----EELAEWKGTEA-----ALLFSSGY 86 (360)
T ss_pred eEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCC-----EEEECchH
Confidence 4577777643 245899999988774 454555543333332 3334444 67788888542 56778999
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI 246 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~---~pklI 246 (520)
+++..++.++++|||+|++.++.|..... .+...|. +++.++ .+|++++++.++.. ++++|
T Consensus 87 ~~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~~v 150 (360)
T TIGR00858 87 LANVGVISALVGKGDLILSDALNHASLID--------GCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRKLI 150 (360)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCeEE
Confidence 88888888889999999999887654421 2233444 333332 36899999988753 46788
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhccccccccc---C-CCC--CcccEEEeccCcccCCCCceEEEee
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV---A-DPF--KYCDVVTTTTHKSLRGPRGGMIFFK 318 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~---~-~p~--~~aDiv~~S~hK~l~GprgG~I~~~ 318 (520)
+++.+++++ ..|+++|.++|+++|+++|+|++|..|....... . ..+ ...+|+++|+||++. ++|||++++
T Consensus 151 ~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~-~~gG~~~~~ 229 (360)
T TIGR00858 151 VTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALG-SYGAYVAGS 229 (360)
T ss_pred EEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhh-ccCcEEEcC
Confidence 877665554 6799999999999999999999987664422100 0 111 146799999999984 578999987
Q ss_pred CCCcchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 319 KDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
+ ++.+.+.....+. ..++++...+++...+++... ..+...+++.++++.+.+.|.+.|+++..+ ...+
T Consensus 230 ~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~ 299 (360)
T TIGR00858 230 Q------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMPS--CTPI 299 (360)
T ss_pred H------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCCC--CCCE
Confidence 7 6666654332221 223344455555555676443 224567889999999999999888776543 2346
Q ss_pred EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+++.+.. ..+..++.+.|.++||.+.....++. +....++||+++..++ ++|++++++.|
T Consensus 300 ~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~iRis~~~~~~----~~~i~~~l~~l 359 (360)
T TIGR00858 300 VPVIIGD-NASALALAEELQQQGIFVGAIRPPTV--PAGTSRLRLTLSAAHT----PGDIDRLAEAL 359 (360)
T ss_pred EEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCC--CCCCceEEEEEcCCCC----HHHHHHHHHhh
Confidence 6666632 23456788888899999964322221 1234589999876543 79999998876
No 79
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=9.8e-23 Score=214.48 Aligned_cols=340 Identities=16% Similarity=0.135 Sum_probs=216.7
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.++|..++. .+++.+++++...+.+....+|+. ..| ...+++...+++.+.+|.+.+. .-+|.+|+|+ +
T Consensus 34 ~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lR~~ia~~l~~~~~~~~~~-~~~I~it~G~~~ 106 (403)
T PRK08636 34 DIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSV---SKG---IYKLRLAICNWYKRKYNVDLDP-ETEVVATMGSKE 106 (403)
T ss_pred CEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCeEEECCChHH
Confidence 4577765442 256667777665543322234443 122 2355556667888888864321 0147779998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHH----HHHHhhh--cCC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDM----LEKTAIL--FRP 243 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~----le~~i~~--~~p 243 (520)
|+..++.++++|||.|++.+|.|.++.. .+...|. ++++++++. +++.+|++. ++++++. .++
T Consensus 107 al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 107 GYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 9999999999999999999998866532 2334565 666666642 346888875 4555543 267
Q ss_pred cEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-ccc--EEEeccCccc--CCC
Q 010008 244 KLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD--VVTTTTHKSL--RGP 310 (520)
Q Consensus 244 klIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~aD--iv~~S~hK~l--~Gp 310 (520)
++|+++.|+||+ .. .+++|.++|+++++++|+|++ |..+.+.+....++ + ..| +++.|++|++ +|.
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~-Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 255 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIA-YADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW 255 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecc-chhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence 899998889997 44 467888889999999999998 44555433211111 1 223 4578999987 899
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 390 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~ 390 (520)
|.||++.++ ++.+.+.........+.+...+.++. .++... ....++..+.+.++++.+.+.|.+.|+.+..
T Consensus 256 RiG~iv~~~------~li~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T PRK08636 256 RVGFVVGNK------KLVGALKKIKSWLDYGMFTPIQVAAT-IALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQK 327 (403)
T ss_pred eeeeeeCCH------HHHHHHHHHHHHhcccCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 999999887 66665544322111233333344332 234321 1223566777788888899999888877654
Q ss_pred CCCCCeeEEEEecCC--CCCHHHHH-HHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 391 GGSDNHLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~--g~~~~~~~-~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
+ ..+.++|+++.+. +++..++. +.+++.||.+ .||.. +....+++||++. ..++++++..+.|.+
T Consensus 328 p-~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v----~pg~~f~~~~~~~iRi~~~------~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 328 P-RASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAV----SPGIGFGEYGDEYVRIALI------ENENRIRQAARNIKK 396 (403)
T ss_pred C-CcceEEEEECCCccCCCCHHHHHHHHHHhCCEEE----ecchhhCcCCCCeEEEEec------CCHHHHHHHHHHHHH
Confidence 3 2356778887532 23445554 5577899999 45543 2223578999874 246888888888877
Q ss_pred HHHH
Q 010008 467 GVEI 470 (520)
Q Consensus 467 ~l~~ 470 (520)
+++.
T Consensus 397 ~l~~ 400 (403)
T PRK08636 397 FLKE 400 (403)
T ss_pred HHHh
Confidence 7753
No 80
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=7.2e-23 Score=212.34 Aligned_cols=324 Identities=14% Similarity=0.111 Sum_probs=210.3
Q ss_pred eEecCCCCChHHHHHHHhhhhhccCCCCCCCC-CC---CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 010008 97 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 97 ~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~-ry---y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A 171 (520)
+-|.+..++.+.+++++..+..+ + +.|.. .. ..+.+.+.+++ +.+++++|++ ++.+++|+ ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~------~i~~~~g~t~a 71 (361)
T cd06452 5 DPIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMD------EARVTPGAREG 71 (361)
T ss_pred ChhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHHH----HHHHHHcCCc------eEEEeCCHHHH
Confidence 33456678899999999876521 1 22211 00 11223445554 6788999993 23345655 89
Q ss_pred HHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhh------cCCc
Q 010008 172 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPK 244 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~------~~pk 244 (520)
+.+++.++++|||+|++.++.|.+.+. .+...|. +++.++++.+ ++.+|++++++++++ .+++
T Consensus 72 l~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 141 (361)
T cd06452 72 KFAVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGL--NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPA 141 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCC--EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCce
Confidence 999999999999999998876644321 2334455 5666666543 358999999998863 2689
Q ss_pred EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcccCC-CCceEEEeeCC
Q 010008 245 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 320 (520)
Q Consensus 245 lIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~ 320 (520)
+|++++++||+ ..|+++|.++|+++|+++++|+||+.|..... ... ++|++++|+||++.+ +++|++++++
T Consensus 142 lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~- 216 (361)
T cd06452 142 LALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMAASAPIGVLATTE- 216 (361)
T ss_pred EEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCccccCCCCeEEEEECH-
Confidence 99999888775 78999999999999999999999886643211 111 589999999999854 4669999987
Q ss_pred CcchhhHHHhhcccCCC-------CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCC
Q 010008 321 PVLGVELESAINNAVFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 392 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~g 392 (520)
++.+++.+...+ ...+++....++++..+++.+. +..+..++..++++++.+.|.+. |++++...
T Consensus 217 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~ 289 (361)
T cd06452 217 -----EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK--ERVKRWDEEVEKARWFVAELEKIEGIKQLGEK 289 (361)
T ss_pred -----HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEECCC
Confidence 566665432211 1122322223334444454432 12223344456678899999886 99887421
Q ss_pred -CCCeeEEEEecC-------CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 393 -SDNHLVLVDLRP-------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 393 -t~~~~~~vd~~~-------~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
...+++.++... ...++.++.+.|.+.||.+.. ++ ....+|+++. |.+++|++.++++|
T Consensus 290 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~-----~~~~~ri~~~-----g~~~e~~~~l~~al 356 (361)
T cd06452 290 PKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK---PG-----LTRYFKLSTY-----GLTWEQVEYVVDAF 356 (361)
T ss_pred CCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc---CC-----CceEEEEEec-----CCCHHHHHHHHHHH
Confidence 233455555431 011234688888888999631 22 2457898763 45689999999999
Q ss_pred HHHH
Q 010008 465 HEGV 468 (520)
Q Consensus 465 ~~~l 468 (520)
+++.
T Consensus 357 ~~~~ 360 (361)
T cd06452 357 KEIA 360 (361)
T ss_pred HHHh
Confidence 8653
No 81
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=3.2e-23 Score=216.30 Aligned_cols=323 Identities=15% Similarity=0.169 Sum_probs=211.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
..++...+++...+...+. +.| +.+.++| +++++++|++. .|.++||++|+.+++.++ ++|
T Consensus 11 ~~~~~e~~~~~~~l~~~~~--------~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~ 72 (379)
T PRK11658 11 AMGDEELAAVKEVLRSGWI--------TTG-PKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGP 72 (379)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCC-HhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCC
Confidence 3455567777666654331 112 3467777 67889999975 355688899999999999 899
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHH
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 262 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i 262 (520)
||+|++++++|.+... .+...|. +++.++++++++.+|++++++++++ ++|+|+..++ ++...|+++|
T Consensus 73 Gd~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~i 140 (379)
T PRK11658 73 GDEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDAI 140 (379)
T ss_pred CCEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHHH
Confidence 9999999988765421 2334565 7777778766778999999999987 8999886543 4457899999
Q ss_pred HHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCCC---
Q 010008 263 RQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL--- 339 (520)
Q Consensus 263 ~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~--- 339 (520)
.++|+++|+++|+|++|..|....+.....+ +.++++++.+|.+++++||+++++++ ++.+++......|.
T Consensus 141 ~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G~~~~ 214 (379)
T PRK11658 141 RAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHGLGVD 214 (379)
T ss_pred HHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcCCCcc
Confidence 9999999999999999998877654322111 34677777789999999999998764 55544432111110
Q ss_pred -----------------CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEe-cCCC---CC-ee
Q 010008 340 -----------------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-SGGS---DN-HL 397 (520)
Q Consensus 340 -----------------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~-~~gt---~~-~~ 397 (520)
.|. + ..+..+.+|+...+...+++..++.+++++.+.+.|.+.++..+ .+.. .+ ++
T Consensus 215 ~~~~~~~~~~~~~~~~~~G~-n-~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 292 (379)
T PRK11658 215 AFDRQTQGRAPQAEVLTPGY-K-YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHL 292 (379)
T ss_pred hhhhhcccCCCcceeecccc-c-cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEE
Confidence 011 1 11222333443333345667777778888888888876543322 2111 11 33
Q ss_pred EEEEecC--CCCCHHHHHHHHhhcCeEEcCCCCCCCCC-CCC---------------CCEEEEccCCccccCCCHHHHHH
Q 010008 398 VLVDLRP--MGIDGARVEKILDMASITLNKNSVPGDKS-ALV---------------PGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 398 ~~vd~~~--~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~-~~~---------------~~giRig~~~~tt~g~~~~d~~~ 459 (520)
+.+.+.. .+++.+++.+.|.+.||.+...+.|.+.. .+. ...|.+ |.. .+++++|+++
T Consensus 293 ~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~l--P~~--~~l~~~~~~~ 368 (379)
T PRK11658 293 FIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSL--PLF--PDMTDADVDR 368 (379)
T ss_pred EEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEc--cCC--CCCCHHHHHH
Confidence 3333322 24677889999999999877554444321 110 012222 211 4688999999
Q ss_pred HHHHHHHHH
Q 010008 460 IADFIHEGV 468 (520)
Q Consensus 460 la~~i~~~l 468 (520)
+++.|++++
T Consensus 369 i~~~i~~~~ 377 (379)
T PRK11658 369 VITALQQIA 377 (379)
T ss_pred HHHHHHHHH
Confidence 999998864
No 82
>PLN02656 tyrosine transaminase
Probab=99.92 E-value=3.6e-23 Score=218.13 Aligned_cols=343 Identities=16% Similarity=0.080 Sum_probs=221.6
Q ss_pred hccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeee
Q 010008 93 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQ 164 (520)
Q Consensus 93 ~~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~ 164 (520)
.+.|+|..+++ .+|+.+++++.+.+......+|.. ..| ..++++...+++.+.+|. +++ +|.
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~----~i~ 100 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVG---LPQARRAIAEYLSRDLPYKLSLD----DVF 100 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHHhcCCCCCcc----cEE
Confidence 46788887765 357899999988776543334422 112 234554555666666664 343 566
Q ss_pred cCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 010008 165 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 242 (520)
Q Consensus 165 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~ 242 (520)
+++|+ +|+..++.++++|||+|++++|.|..+. ......|. +++.++++++ ++.+|++++++++++ +
T Consensus 101 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~ 169 (409)
T PLN02656 101 ITSGCTQAIDVALSMLARPGANILLPRPGFPIYE--------LCAAFRHL--EVRYVDLLPEKGWEVDLDAVEALADQ-N 169 (409)
T ss_pred EeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHH--------HHHHHcCC--EEEEEeCCCcCCCCCCHHHHHHHhcc-C
Confidence 68887 8999999999999999999999875431 12233454 5666666533 467999999998877 7
Q ss_pred CcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---Cc--ccEEEeccCccc--CCC
Q 010008 243 PKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGP 310 (520)
Q Consensus 243 pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~~--aDiv~~S~hK~l--~Gp 310 (520)
+++|++++|+||+ . .++++|.++|+++|++||+|++ |.++.+.+....++ .. .-|++.|++|++ +|+
T Consensus 170 ~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 248 (409)
T PLN02656 170 TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEV-YGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW 248 (409)
T ss_pred ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehh-hhhcccCCCCcccHHHhcccCcEEEEcccchhccCcce
Confidence 8999998899987 3 2688899999999999999999 45665544221222 11 126789999984 899
Q ss_pred CceEEEeeCCCcc--hhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 311 RGGMIFFKKDPVL--GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 311 rgG~I~~~~~~~~--~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
|.||++++++... ..++.+++...... . ++++....+++..+|+......+++..+++.++++.+.+.|++. ++.
T Consensus 249 RiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~ 326 (409)
T PLN02656 249 RLGWFVTTDPSGSFRDPKIVERIKKYFDI-L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCIT 326 (409)
T ss_pred eEEEEEEeCcccccccHHHHHHHHHHHhh-h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999998531000 01455555433221 1 22233333344445543212235677788888899999999875 333
Q ss_pred EecCCCCCeeEEEEecC---CCC-CH-HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 388 LVSGGSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 388 v~~~gt~~~~~~vd~~~---~g~-~~-~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
.......+.++|+++.. .+. +. +.+.++|.+.||.+ .||... ..++++||++. .+++++++..+
T Consensus 327 ~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v----~pg~~f-g~~~~iRi~~~------~~~e~l~eal~ 395 (409)
T PLN02656 327 CPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVII----LPGTAV-GLKNWLRITFA------ADPSSLEEALG 395 (409)
T ss_pred CCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEE----ecchhc-CCCCeEEEEeC------CCHHHHHHHHH
Confidence 22222234667877742 112 23 34678889999999 455431 13578999865 24788888888
Q ss_pred HHHHHHHH
Q 010008 463 FIHEGVEI 470 (520)
Q Consensus 463 ~i~~~l~~ 470 (520)
.|++++..
T Consensus 396 rl~~~~~~ 403 (409)
T PLN02656 396 RIKSFYLR 403 (409)
T ss_pred HHHHHHHH
Confidence 88877653
No 83
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.92 E-value=1e-23 Score=213.50 Aligned_cols=345 Identities=19% Similarity=0.204 Sum_probs=222.7
Q ss_pred ccceEec-CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 010008 94 KSLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 94 ~~i~Lia-sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A 171 (520)
+.+.|.. +..++++.|++||..++.+.| |.|..++| |++..+.+| .+|+.+++++|+++.+ |..|+|+ ++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E-~aR~~VAklInAd~~d----IiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVE-AAREQVAKLINADPSD----IVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHH-HHHHHHHHHhCCCCCc----EEEeCCchHH
Confidence 5567764 457899999999999988776 77887733 566667787 6899999999999974 4457766 99
Q ss_pred HHHHHHhh-CCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 172 NFEVYTAI-LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 172 ~~~~l~al-l~pGD----~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
|.+++.++ ..++| +|++++.+|..++-.. ..+...++++..+|++ +++.+|.+.+++.+++ +|+++
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-------~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-------RALQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHH-------HHHHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 99999987 56788 9999998887664221 1122223688888887 7899999999999999 99999
Q ss_pred EEcCCC-CCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcc
Q 010008 247 IAGASA-YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 323 (520)
Q Consensus 247 i~~~s~-~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 323 (520)
.+..-+ -++ .+|+++|.++|++.|+.+++|+||..|.+..++... ++|+++++.|||+ ||+| |++++++.
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~el---n~D~~s~s~HK~y-gp~~iGaLYvr~~--- 258 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQEL---NADFLSISAHKIY-GPPGIGALYVRRK--- 258 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHc---Cchheeeeccccc-CCCcceEEEEccC---
Confidence 888543 344 889999999999999999999999999987766544 4899999999986 6665 99999872
Q ss_pred hhhHHHhhc--ccCCCC------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecCCC
Q 010008 324 GVELESAIN--NAVFPG------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGS 393 (520)
Q Consensus 324 ~~~l~~~i~--~~~~p~------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~gt 393 (520)
. .++. .....| ..|+.......++..|.+.+.. +..-....+.+....+...+.. ....+...+.
T Consensus 259 ---~-~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~ 333 (428)
T KOG1549|consen 259 ---R-PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGK 333 (428)
T ss_pred ---C-CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCchhhccCCcc
Confidence 1 1111 111111 1455566666666666665432 1111122222233333333322 1222222111
Q ss_pred C--CeeEEEEec-CCCCCH-HHHHHHHhhcCeEEcCCC-CC-------CCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 394 D--NHLVLVDLR-PMGIDG-ARVEKILDMASITLNKNS-VP-------GDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 394 ~--~~~~~vd~~-~~g~~~-~~~~~~L~~~gI~v~~~~-~P-------g~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
. ....-+.+. ..+... ......-...|..+-.+. -| |.......++||||...+|+ ++|+++++
T Consensus 334 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t----~~di~~~~ 409 (428)
T KOG1549|consen 334 SRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT----EEDIDYLV 409 (428)
T ss_pred cccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----HHHHHHHH
Confidence 1 111222222 112211 111111112232222221 11 11123346899999998886 89999999
Q ss_pred HHHHHHHHHH
Q 010008 462 DFIHEGVEIT 471 (520)
Q Consensus 462 ~~i~~~l~~~ 471 (520)
+.|.+.++..
T Consensus 410 ~~i~~~v~~~ 419 (428)
T KOG1549|consen 410 DAIKKLVSLL 419 (428)
T ss_pred HHHHHHHHhc
Confidence 9999888754
No 84
>PRK08363 alanine aminotransferase; Validated
Probab=99.92 E-value=1.2e-22 Score=213.58 Aligned_cols=334 Identities=16% Similarity=0.106 Sum_probs=214.5
Q ss_pred ccceEecCCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecC
Q 010008 94 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPL 166 (520)
Q Consensus 94 ~~i~Liasen-----~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~ 166 (520)
+.|+|..++. .+++.+.+++.+.+.+.. ..| +..+...++++...+++.+.+|. +++ +|.++
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~~----~i~it 99 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYY------GPSEGLPELREAIVKREKRKNGVDITPD----DVRVT 99 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCC------CCCCCcHHHHHHHHHHHHHhcCCCCChh----hEEEe
Confidence 5688887664 368889999987765431 122 21222346665555666666664 454 56668
Q ss_pred ChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCCCCCHHHHHHHhhhcCCc
Q 010008 167 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPK 244 (520)
Q Consensus 167 sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~-~~d~~~~~iD~d~le~~i~~~~pk 244 (520)
+|+ +|+..++.++++|||+|++++|.|.++.. .+...|. .++.+ +++++++.+|.+++++.+++ +++
T Consensus 100 ~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~ 168 (398)
T PRK08363 100 AAVTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTK 168 (398)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceE
Confidence 886 89999999999999999999998765532 2233444 55555 45545567999999999877 889
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCC--CCcc--cEEEeccCccc--CCCCce
Q 010008 245 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYC--DVVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 245 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p--~~~a--Div~~S~hK~l--~GprgG 313 (520)
+|++++++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+...+. +... -+++.|++|++ +|.|.|
T Consensus 169 ~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 247 (398)
T PRK08363 169 AIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLG 247 (398)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEE
Confidence 99999899987 444 8889999999999999999954 44433322111 1112 26678999984 788999
Q ss_pred EEEe--eCCCcchhhHHHhhcccCC---CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 314 MIFF--KKDPVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 314 ~I~~--~~~~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
|+++ ++ ++.+.+..... ....+.....+. +.+.+|.. .....++..+++.++++.+.+.|.+. |+.
T Consensus 248 ~~~~~~~~------~~~~~l~~~~~~~~~~~~~~s~~~q~-~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 319 (398)
T PRK08363 248 YIYFVDPE------GKLAEVREAIDKLARIRLCPNTPAQF-AAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS 319 (398)
T ss_pred EEEEeCcH------HHHHHHHHHHHHHhcccccCChHHHH-HHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 9998 43 33333221110 001122222222 22334432 12234677788888899999999875 777
Q ss_pred EecCCCCCeeEEEEecCCC-CCH-HHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 388 LVSGGSDNHLVLVDLRPMG-IDG-ARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 388 v~~~gt~~~~~~vd~~~~g-~~~-~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+..+ ..+++.|+.+.... .+. +.+.+.|.++||.+. ||.. +...++++||++. .+++++++..+.|
T Consensus 320 ~~~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~----~g~~f~~~~~~~iRis~~------~~~~~l~~~l~~l 388 (398)
T PRK08363 320 TTKP-QGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFV----HGSGFGEYGAGHFRLVFL------PPVEILEEAMDRF 388 (398)
T ss_pred ecCC-CeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHH
Confidence 6443 23455555664311 133 445677899999994 4443 2223578999863 2368888888888
Q ss_pred HHHHH
Q 010008 465 HEGVE 469 (520)
Q Consensus 465 ~~~l~ 469 (520)
.+++.
T Consensus 389 ~~~~~ 393 (398)
T PRK08363 389 EEFMR 393 (398)
T ss_pred HHHHH
Confidence 87665
No 85
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=1.7e-23 Score=215.86 Aligned_cols=294 Identities=18% Similarity=0.187 Sum_probs=199.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 135 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
+..+++| +.+++++|.+. .+.++||++|+..++.++ ++|||+|+++.+.|.+... .+...|.
T Consensus 18 ~~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g~ 80 (352)
T cd00616 18 PKVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLGA 80 (352)
T ss_pred HHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcCC
Confidence 3455666 67889999753 355678999999999998 7999999999987654321 2333454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 293 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~ 293 (520)
+++.++++++++.+|++++++.+++ ++++|++.++ ++...|+++|.++|+++|+++|+|++|..|....+. ++
T Consensus 81 --~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~ 153 (352)
T cd00616 81 --TPVFVDIDPDTYNIDPELIEAAITP-RTKAIIPVHL-YGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KV 153 (352)
T ss_pred --eEEEEecCCCcCCcCHHHHHHhcCc-CCeEEEEECC-CCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ec
Confidence 6777777755788999999999976 8999988643 455789999999999999999999999988764432 11
Q ss_pred C-cccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCCCCC-----------C-CChHHHH-HHHHHHHHH
Q 010008 294 K-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ-----------G-GPHNHTI-GGLAVCLKH 357 (520)
Q Consensus 294 ~-~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~-----------g-~p~~~~i-aala~al~~ 357 (520)
. .+|+.++|+| |+++++.||+++++++ ++.+++......+.. + +..+..+ +++ ++..
T Consensus 154 ~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~--~~~~ 226 (352)
T cd00616 154 GTFGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAI--GLAQ 226 (352)
T ss_pred ccCcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHH--HHHH
Confidence 1 3688888876 9998888999998764 454444321111110 0 0011111 211 2221
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCC----CCeeEEEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCC
Q 010008 358 AQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS----DNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGD 431 (520)
Q Consensus 358 ~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt----~~~~~~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~ 431 (520)
...+++..++..++++++.+.|.+ .|++++.... ..+++.+.+... +.+..++.+.|.+.||.++..+.|..
T Consensus 227 --l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~ 304 (352)
T cd00616 227 --LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLH 304 (352)
T ss_pred --HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccc
Confidence 124566778888999999999988 5888765422 123344444321 46788899999999998876554432
Q ss_pred CCC------------C------CCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 432 KSA------------L------VPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 432 ~~~------------~------~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
..+ + ..+.||+++... ++++|++++++.|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~----~t~~di~~i~~~l~ 352 (352)
T cd00616 305 HQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPS----LTEEEIDRVIEALR 352 (352)
T ss_pred cCHhhhhccCCCcCCChHHHHHHhCeEEccCCCC----CCHHHHHHHHHHhC
Confidence 110 0 126799988755 45999999998873
No 86
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1e-22 Score=213.53 Aligned_cols=333 Identities=17% Similarity=0.128 Sum_probs=219.4
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sGs 169 (520)
..++|..+++. +++.+.+++...+.+.. ..|+. ......+++...+++.+.+|. +++ +|.+++|+
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~----~i~~~~g~ 100 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTP------AAGIPELREAIAAKLKRDNGLDYDPS----QVIVTTGA 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCChHHHHHHHHHHHHHHhCCCCCHH----HEEEeCCc
Confidence 55777766653 56889999887775432 22332 222456665555666666664 443 45567776
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi 247 (520)
+|+..++.+++++||.|++++|.|.++.. .+...|. +++.++++++ ++.+|++++++.+++ ++++|+
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~ 169 (393)
T PRK05764 101 KQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVPTGEENGFKLTVEQLEAAITP-KTKALI 169 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEecCcccCCcCCHHHHHHhhCc-cceEEE
Confidence 89999999999999999999998765421 2234455 6666666643 467999999999876 889999
Q ss_pred EcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC-----C--cccEEEeccCccc--CCCCce
Q 010008 248 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K--YCDVVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 248 ~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~-----~--~aDiv~~S~hK~l--~GprgG 313 (520)
++.++||+ .. ++++|.++|+++|+++++|+++. .+...+....++ . ..++++.|++|++ +|+|.|
T Consensus 170 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 248 (393)
T PRK05764 170 LNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLG 248 (393)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeE
Confidence 99889887 33 48889999999999999999853 444332211111 1 2468889999986 677889
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCC
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 392 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~g 392 (520)
+++.++ ++.+.+.........+.+...+. +...++.. .....++..+++.++++.+.+.|.+. |+.+..+
T Consensus 249 ~i~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 319 (393)
T PRK05764 249 YAAGPK------ELIKAMSKLQSHSTSNPTSIAQY-AAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP- 319 (393)
T ss_pred EEecCH------HHHHHHHHHHhhcccCCChHHHH-HHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-
Confidence 999877 67666654332222232233332 22334432 12233566777788888899999886 8876654
Q ss_pred CCCeeEEEEecCC----CCCHHHHH-HHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 393 SDNHLVLVDLRPM----GIDGARVE-KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 393 t~~~~~~vd~~~~----g~~~~~~~-~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..+.++|+++... +.+..++. .+++++||.+. ||.... ..+++||++. .+++++++.++.|.++
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~f~-~~~~vRis~~------~~~~~~~~~i~~l~~~ 388 (393)
T PRK05764 320 EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVV----PGIAFG-APGYVRLSYA------TSLEDLEEGLERIERF 388 (393)
T ss_pred CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEc----cccccC-CCCEEEEEec------CCHHHHHHHHHHHHHH
Confidence 3345667777532 11235554 45578999994 444311 2678999864 3479999999999887
Q ss_pred HH
Q 010008 468 VE 469 (520)
Q Consensus 468 l~ 469 (520)
++
T Consensus 389 ~~ 390 (393)
T PRK05764 389 LE 390 (393)
T ss_pred HH
Confidence 75
No 87
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.92 E-value=2.8e-23 Score=216.93 Aligned_cols=321 Identities=18% Similarity=0.180 Sum_probs=209.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 183 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 183 (520)
.++..++++...+.+.+ |+.| +..+++| +.+++++|.+. .|.++||++|+.+++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~--------~~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF--------LTQG-PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC--------ccCC-hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 34445666665554432 1112 3356666 67888999875 345578999999999999 8999
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhh----hcCCcEEEEcCCCCCCCCCH
Q 010008 184 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----LFRPKLIIAGASAYPRDFDY 259 (520)
Q Consensus 184 D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~----~~~pklIi~~~s~~p~~~d~ 259 (520)
|+|++++++|.+.. ..+...|. +++.++++++++.+|++++++.++ + ++++|++.++ ++...|+
T Consensus 70 d~Viv~~~~~~~~~--------~~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~-~t~~v~~~~~-~G~~~~~ 137 (380)
T TIGR03588 70 DRVWTTPITFVATA--------NCALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGK-LPKAIVPVDF-AGKSVDM 137 (380)
T ss_pred CEEEeCCcchHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCC-CceEEEEeCC-CCccCCH
Confidence 99999998765432 12334455 777888876778899999999998 4 7898887543 4557899
Q ss_pred HHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCC
Q 010008 260 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFP 337 (520)
Q Consensus 260 ~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p 337 (520)
++|.++|+++|++||+|++|+.|....+..-....++|++++|+| |+++++.||+++++++ ++.++++.....
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~~~~ 212 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLLRSH 212 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHHHHC
Confidence 999999999999999999999887643321111125699999998 8898889999999875 455443321100
Q ss_pred C---------------------CCC-CChHHHH-HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecC--
Q 010008 338 G---------------------LQG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-- 391 (520)
Q Consensus 338 ~---------------------~~g-~p~~~~i-aala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~-- 391 (520)
+ ..| +..+..+ +++ ++.++ ..+++..++..++++++.+.|.+. ++.+...
T Consensus 213 g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~ 288 (380)
T TIGR03588 213 GITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPL 288 (380)
T ss_pred CCCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence 0 001 0111122 222 22222 235677788888899999999774 3443322
Q ss_pred CCC--CeeEEEEecC-CCCCHHHHHHHHhhcCeEEcCCCCCCCCCC-C---------------CCCEEEEccCCccccCC
Q 010008 392 GSD--NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSA-L---------------VPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 392 gt~--~~~~~vd~~~-~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~-~---------------~~~giRig~~~~tt~g~ 452 (520)
+.. .+.+.+.+.. .+.+.+++.+.|.+.||.++..+.|.+..+ + ....|++..+ ..+
T Consensus 289 ~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~----~~l 364 (380)
T TIGR03588 289 GSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLH----PAL 364 (380)
T ss_pred CCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCC----CCC
Confidence 111 1333333432 345778899999999999886654533110 0 0144666543 246
Q ss_pred CHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGV 468 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l 468 (520)
+++|++++++.|++++
T Consensus 365 ~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 365 TLEQQQRVVETLRKVL 380 (380)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 7999999999998763
No 88
>PLN02187 rooty/superroot1
Probab=99.92 E-value=1.2e-22 Score=216.97 Aligned_cols=344 Identities=13% Similarity=0.100 Sum_probs=219.3
Q ss_pred ccceEecCCC-----C-ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeec
Q 010008 94 KSLELIASEN-----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQP 165 (520)
Q Consensus 94 ~~i~Liasen-----~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~ 165 (520)
+.|.|..++. + +++.+.+++...+......+|.. .....++++...+++.+.+|. +++ +|.+
T Consensus 67 ~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lR~aiA~~~~~~~~~~~~~~----~I~i 136 (462)
T PLN02187 67 TILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGP------GAGILPARRAVADYMNRDLPHKLTPE----DIFL 136 (462)
T ss_pred CeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCChHHHHHHHHHHHHHhcCCCCCcc----cEEE
Confidence 5677876643 2 45788888887765432223321 122345665555666665554 554 5667
Q ss_pred CChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCC
Q 010008 166 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRP 243 (520)
Q Consensus 166 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~~~p 243 (520)
++|+ +|+..++.++++|||+|++++|.|.++. ..+...|. +++.+++.+ +++.+|++++++++++ ++
T Consensus 137 t~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~~~~-~~ 205 (462)
T PLN02187 137 TAGCNQGIEIVFESLARPNANILLPRPGFPHYD--------ARAAYSGL--EVRKFDLLPEKEWEIDLEGIEAIADE-NT 205 (462)
T ss_pred eCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHH--------HHHHHcCC--EEEEEeCccccCCccCHHHHHHhcCC-Cc
Confidence 8888 8999999999999999999999876532 12334565 555655543 3578999999999877 78
Q ss_pred cEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cc----cEEEeccCccc--CCCC
Q 010008 244 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC----DVVTTTTHKSL--RGPR 311 (520)
Q Consensus 244 klIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~a----Div~~S~hK~l--~Gpr 311 (520)
++++++.|+||+ .++ +++|.++|+++|++||+|++ |..+++.+....++. .. -+++.|++|++ +|+|
T Consensus 206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~-Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlR 284 (462)
T PLN02187 206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEV-YDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWK 284 (462)
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCceeHHHhccCCcEEEEecchhhcCCccce
Confidence 999999999997 454 77888899999999999999 556655432211221 11 26779999984 8999
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEE-e
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-V 389 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v-~ 389 (520)
.||++++++... .++.+.+.....+. ...+++....+++..+|+......+++..+.+.++++.+.+.|.+.+... +
T Consensus 285 iG~~v~~~p~~~-~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~ 363 (462)
T PLN02187 285 IGWIALNDPEGV-FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCP 363 (462)
T ss_pred eEEEEecCchhH-HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 999998542100 00122332221111 12223333444444456531122347777888899999999998854322 2
Q ss_pred cCCCCCeeEEEEecC---CCC-CH-HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 390 SGGSDNHLVLVDLRP---MGI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 390 ~~gt~~~~~~vd~~~---~g~-~~-~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
.......++|+++.. .++ +. +.+.+++.++||.+ .||.... .+++|||++. ..++.+++..+.|
T Consensus 364 ~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~fg-~~~~iRis~~------~~~e~l~~al~rL 432 (462)
T PLN02187 364 KKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVF----LPGDALG-LKNWMRITIG------VEAHMLEDALERL 432 (462)
T ss_pred CCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEE----ECccccC-CCCeEEEEeC------CCHHHHHHHHHHH
Confidence 222234666776632 122 33 44667789999999 4554311 3578999864 2367788888888
Q ss_pred HHHHHHH
Q 010008 465 HEGVEIT 471 (520)
Q Consensus 465 ~~~l~~~ 471 (520)
.++++..
T Consensus 433 ~~~l~~~ 439 (462)
T PLN02187 433 KGFCTRH 439 (462)
T ss_pred HHHHHHh
Confidence 8887643
No 89
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=1.6e-22 Score=211.68 Aligned_cols=358 Identities=15% Similarity=0.140 Sum_probs=223.5
Q ss_pred ccccChHHHHHHHHHHHHhhccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 010008 74 LGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 151 (520)
Q Consensus 74 l~~~d~~~~~~~~~e~~~~~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~l 151 (520)
+....++++..+.+... ....++|..+.. ..++.+.+++...+.... .+|+. .....++++.+.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP------GPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHH
Confidence 34445544444433333 235688876442 345667777766654321 12332 122345666666777888
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCC
Q 010008 152 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGL 228 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~--~~~ 228 (520)
+|++.+.- -+|.+++|+ +|+.+++.++++|||+|++++|.|.++. ..+...|. +++.++++++ ++.
T Consensus 78 ~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~ 146 (387)
T PRK07777 78 YGLEYDPD-TEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--------AVIAMAGA--HRVPVPLVPDGRGFA 146 (387)
T ss_pred hCCCCCCC-CcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHCCC--EEEEeecCCccCCCc
Confidence 88763210 135567776 8999999999999999999998775432 12334455 5555666543 467
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC------Cccc
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF------KYCD 297 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~------~~aD 297 (520)
+|++++++.+.+ ++++|++++++||+ .. ++++|.++|+++|+++|+|+++ .++.+.+....++ ...+
T Consensus 147 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 147 LDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred CCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcCcE
Confidence 999999999877 89999999889887 33 4888999999999999999985 4544433211121 1346
Q ss_pred EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 298 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 298 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
+++.|+||++ +|.|.||+++++ ++.+.+...........+...+. +++.++... ....+...+.+.++++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~ 296 (387)
T PRK07777 225 VTISSAAKTFNVTGWKIGWACGPA------PLIAAVRAAKQYLTYVGGAPFQP-AVAHALDHE-DAWVAALRDSLQAKRD 296 (387)
T ss_pred EEEeechhhccCcCceeEEEecCH------HHHHHHHHHHhhcccCCCCHHHH-HHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence 8899999987 588889999887 56655543221111111222222 223334321 2233666788889999
Q ss_pred HHHHHHHHCCCEEecCCCCCeeEEEEecCCC-CCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 376 ALASRLVELGYKLVSGGSDNHLVLVDLRPMG-IDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 376 ~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g-~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
.+.+.|.+.|+.+..+ ..++++|++++..+ .++.++.+.| +++||.+..+...+...+..++++||+... .
T Consensus 297 ~l~~~L~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~------~ 369 (387)
T PRK07777 297 RLAAGLAEAGFEVHDS-AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK------R 369 (387)
T ss_pred HHHHHHHhCCCCccCC-CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC------C
Confidence 9999998888876654 23566676765322 3566666666 679999954321111112235689998642 3
Q ss_pred HHHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHEG 467 (520)
Q Consensus 454 ~~d~~~la~~i~~~ 467 (520)
++++++..+.|.+.
T Consensus 370 ~~~l~~~l~~l~~~ 383 (387)
T PRK07777 370 DDTLDEAIRRLRAL 383 (387)
T ss_pred HHHHHHHHHHHHHH
Confidence 67887777777654
No 90
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=7.2e-23 Score=213.76 Aligned_cols=317 Identities=17% Similarity=0.165 Sum_probs=215.5
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +|+.+++++... . +...||. .. ..++ ++.+++++|++++ +|.+++|+ +
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~-~--~~~~Yp~------~~-~~~l----r~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNM-K--FPYVYPD------PE-SRRL----RAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhh-H--hhccCCC------CC-HHHH----HHHHHHHhCcChh----hEEEcCCHHH
Confidence 56889889875 678899988642 1 1112332 11 2333 3678888999886 56779998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++++|.|+.+. ......|. +++.++++ +++.+|++++++.+...++|+|++++
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFGMYV--------FDAAVNGA--EVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 998898999999999999999764321 12234455 56666665 45789999999988433899999999
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--cccEEEeccCccc--CCCCceEEEeeCCCcch
Q 010008 251 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--~aDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 324 (520)
|+||+ .++.+++.++++.. +++++|+++ ..+...+.....+. ...+++.|++|.+ +|+|.||+++++
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~----- 256 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL----- 256 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH-----
Confidence 99997 78999999999864 999999995 34433221111111 1237889999986 799999999987
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC-CEEecCCCCCeeEEEEec
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G-~~v~~~gt~~~~~~vd~~ 403 (520)
++.+.+.+...+. +.+...+.++ ..+|+. ...+++..+++.++++.+.+.|++.| +.+... .++++|+++.
T Consensus 257 -~~i~~l~~~~~~~--~~~~~~q~aa-~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~~~f~~~~~~ 328 (380)
T PLN03026 257 -SIIEYLWRAKQPY--NVSVAAEVAA-CAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYPS--DANFILCRVT 328 (380)
T ss_pred -HHHHHHHHhcCCC--CCCHHHHHHH-HHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECCC--CCeEEEEECC
Confidence 6777665543332 2222223332 334532 12236677788888999999998865 444332 3466777764
Q ss_pred CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 404 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 404 ~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
. +.+..++.+.|.++||.+.. +.. ...++++||++. +.++++++.+.++++
T Consensus 329 ~-~~~~~~~~~~l~~~gI~v~~----~~~-~~~~~~lRis~~-------~~~~~~~l~~al~~~ 379 (380)
T PLN03026 329 S-GRDAKKLKEDLAKMGVMVRH----YNS-KELKGYIRVSVG-------KPEHTDALMEALKQL 379 (380)
T ss_pred C-CCCHHHHHHHHHHCCeEEEE----CCC-CCCCCEEEEecC-------CHHHHHHHHHHHHHh
Confidence 2 45677788888899999954 322 223578999864 367899999988753
No 91
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=1.4e-22 Score=212.84 Aligned_cols=294 Identities=19% Similarity=0.156 Sum_probs=189.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCC--CCEEEEcCCCCCcccccccccccccccccc--c
Q 010008 139 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS--I 213 (520)
Q Consensus 139 ~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~p--GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g--~ 213 (520)
++.+.+++++++++|++.++ +.+. .+|+ +++.+++.+++++ ||+|+++++.|+++... +...+ .
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v~~~-~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~--------~~~~~~~~ 132 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--ASLQ-DEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAV--------ARTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--eecc-CchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHH--------HHHhcccC
Confidence 55556678999999998643 2333 4455 5666666777776 99999999988765321 12222 0
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCH-HHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~-~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
..+++.++++ +++.+|++++++++.+ ++++|+++.++..+ ..|+ ++|+++|+++|+++++|++|..+........
T Consensus 133 g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~- 209 (398)
T cd00613 133 GIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGE- 209 (398)
T ss_pred CcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHH-
Confidence 1255556665 3568999999999987 89999988765333 5675 9999999999999999998866542211101
Q ss_pred CCCcccEEEeccCccc-----CCCCceEEEeeCCCcchhhHHHhhcccC------------CC-----------CCCCCC
Q 010008 292 PFKYCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNAV------------FP-----------GLQGGP 343 (520)
Q Consensus 292 p~~~aDiv~~S~hK~l-----~GprgG~I~~~~~~~~~~~l~~~i~~~~------------~p-----------~~~g~p 343 (520)
.++|++++|+|||+ .||++|+++.++ ++.+.+.... +. ...+++
T Consensus 210 --~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~ 281 (398)
T cd00613 210 --YGADIVVGNLQKTGVPHGGGGPGAGFFAVKK------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS 281 (398)
T ss_pred --cCCCEEEeeccccCCCCCCCCCceeEEEEhh------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccc
Confidence 15899999999997 257789999987 3433321100 00 001111
Q ss_pred h-----HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC-CCCHHHHHHHHh
Q 010008 344 H-----NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-GIDGARVEKILD 417 (520)
Q Consensus 344 ~-----~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~-g~~~~~~~~~L~ 417 (520)
+ ....++.+.++......++++..+++.++++++.+.|.+.+......+...+.+++++... +.+..++.+.|.
T Consensus 282 ~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~ 361 (398)
T cd00613 282 NICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALI 361 (398)
T ss_pred cceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhh
Confidence 1 1122222334454444566788899999999999999886544322222223345555421 334567888888
Q ss_pred hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 418 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 418 ~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+.||.+.... +..++.||++.+.++| ++|++++++.|
T Consensus 362 ~~gi~~~~~~------~~~~~~lRis~~~~~t----~edid~~~~~L 398 (398)
T cd00613 362 DGGFHAPTMY------LPVDGTLMIEPTETET----KEELDALLEAL 398 (398)
T ss_pred hcCccccccc------cCCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence 8999874311 1235789999887665 89999998753
No 92
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=4.5e-23 Score=213.43 Aligned_cols=320 Identities=18% Similarity=0.146 Sum_probs=220.0
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..+||+ +|+.+++++.+.+.+....+||.. | ..+++ +.+++++|++.+ .+|.+++|+ +
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~---~~~lr----~~ia~~~~~~~~---~~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R---AAALK----AALRAAMGVPAG---ADVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C---HHHHH----HHHHHHhCcCCC---CcEEEcCCHHH
Confidence 56888888884 689999999887753222345431 1 13333 567788888753 256779998 7
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++++|.|.++. ......|. +++.++++ +++.+|++++++.+...++|+|+++.
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 161 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPEPGFVMYR--------MSAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLAY 161 (356)
T ss_pred HHHHHHHHhcCCCCEEEECCCCHHHHH--------HHHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence 888888899999999999998765432 12334565 67777776 45789999999998765899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-c-ccEEEeccCcc-cCCCCceEEEeeCCCcchh
Q 010008 251 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKS-LRGPRGGMIFFKKDPVLGV 325 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~-aDiv~~S~hK~-l~GprgG~I~~~~~~~~~~ 325 (520)
|+||+ ..+.+++.++++..++++|+|+++. .+......+ .+. + .-+++.|++|+ ++|+|.||+++++
T Consensus 162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~------ 233 (356)
T PRK04870 162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP------ 233 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH------
Confidence 99997 7888888888887799999999853 333211111 111 2 23788999993 3789999999987
Q ss_pred hHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecC
Q 010008 326 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 404 (520)
Q Consensus 326 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~ 404 (520)
++.+++.....+. +.....+.+ ...+++. ...+++..+++.++++.+.+.|++. |+.+..+ .+.++|+.+.
T Consensus 234 ~~i~~~~~~~~~~--~~~~~~q~~-a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~- 305 (356)
T PRK04870 234 AWIAELDKVRPPY--NVNVLTQAT-ALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVFPS--AANFILVRVP- 305 (356)
T ss_pred HHHHHHHHccCCC--cCCHHHHHH-HHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CCeEEEEECC-
Confidence 6767665543222 122222222 2223332 1234667788888999999999885 8766443 3456777664
Q ss_pred CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 405 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 405 ~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
+..++.+.|++.||.+...... ....++++||++. +.++++++.++|+++
T Consensus 306 ---~~~~~~~~l~~~gI~v~~~~~f---~~~~~~~iRis~~-------~~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFDGLKTRGVLVKNLSGM---HPLLANCLRVTVG-------TPEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHHHHHHCCEEEEECCCC---CCCCCCeEEEeCC-------CHHHHHHHHHHHHHh
Confidence 4577888899999999543211 1224678999864 368999999998765
No 93
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.92 E-value=1.7e-22 Score=210.83 Aligned_cols=330 Identities=17% Similarity=0.189 Sum_probs=215.7
Q ss_pred ccceEecCCC--C-ChHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 94 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
..|+|..+++ + .+|.|++++...+.. |..+++..++..| .+..+ ..++++++++|.+ + .+.+++|+
T Consensus 40 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~----~l~~~la~~~~~~-~----~i~~~~g~ 109 (385)
T PRK05958 40 RMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGSRLVTGNSPAHE----ALEEELAEWFGAE-R----ALLFSSGY 109 (385)
T ss_pred eEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccCCcHHHH----HHHHHHHHHhCCC-c----EEEECcHH
Confidence 5578877764 3 578999999888753 4333333232222 22233 3446788889853 2 45668888
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 247 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi 247 (520)
+++..++.++++|||+|++.++.|+++.. .....|. +++.++ ..|++++++.++.. ++.+++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeEEE
Confidence 88888888899999999999987765431 1233444 333433 24889999988763 245666
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc-cc-cCC--CCC-c-ccEEEeccCcccCCCCceEEEeeC
Q 010008 248 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK-Y-CDVVTTTTHKSLRGPRGGMIFFKK 319 (520)
Q Consensus 248 ~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~~-~~~--p~~-~-aDiv~~S~hK~l~GprgG~I~~~~ 319 (520)
++.+.+++ ..++++|+++|+++|+++|+|++|..|.... +. ... .+. . .++++.|+||++ |+.||+++.++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence 66555443 7889999999999999999999987665421 11 010 122 2 347889999998 56789988876
Q ss_pred CCcchhhHHHhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeE
Q 010008 320 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 398 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~ 398 (520)
++.+.+.....+.. .++++...+++...+++..... +...+++.++++.+.+.|++.|++++.+ .+.++
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~ 322 (385)
T PRK05958 253 ------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMDS--QSAIQ 322 (385)
T ss_pred ------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEE
Confidence 56655543222222 2334455555555677765432 4567888888999999999888876553 23456
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
++.+.. ..+..++.+.|.+.||.+.....|. .+..+.++||+.+..+ +++|++++++.|+++
T Consensus 323 ~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~--~~~~~~~lRis~~~~~----~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 323 PLIVGD-NERALALAAALQEQGFWVGAIRPPT--VPAGTSRLRITLTAAH----TEADIDRLLEALAEA 384 (385)
T ss_pred EEEeCC-HHHHHHHHHHHHHCCceEecccCCC--CCCCCceEEEEecCCC----CHHHHHHHHHHHHhc
Confidence 665532 2345668888888999996422221 1123468999976543 489999999998765
No 94
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=1.3e-22 Score=213.12 Aligned_cols=333 Identities=14% Similarity=0.119 Sum_probs=214.2
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC---CCCCceeeecCC
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLS 167 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~---~~~~~~~V~~~s 167 (520)
.+.|+|..+++. +++.+.+++...+... ..|+. ..| ..++.+...+++.+.+|.+ ++ -+|.+++
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~~---~~i~it~ 97 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAG---LPALREAIAAWLERRYGLPALDPA---TQVLPVN 97 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCC---CHHHHHHHHHHHHHHhCCCcCCcc---ceEEECC
Confidence 366888777753 5788889987765421 23433 122 2345555567787777854 32 1566788
Q ss_pred hH-HHHHHHHHhhCCC---CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 010008 168 GS-PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 242 (520)
Q Consensus 168 Gs-~A~~~~l~all~p---GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~ 242 (520)
|+ +|+..++.++++| ||.|++++|.|.++. ......|. ++++++++++ ++.+|++++++.+.+ +
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~vp~~~~~~~~~d~~~l~~~~~~-~ 166 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE--------GAALLAGA--EPYFLNCDPANNFAPDFDAVPAEVWA-R 166 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH--------HHHHhcCC--EEEEeccCccccCccCHHHHHHHHhh-c
Confidence 88 8999999999999 999999999775442 12334555 6777777654 358999999888876 8
Q ss_pred CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC-----c---cc--EEEeccCc
Q 010008 243 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-----Y---CD--VVTTTTHK 305 (520)
Q Consensus 243 pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~-----~---aD--iv~~S~hK 305 (520)
+|+|+++.|+||+ .+ .+++|.++|++++++||+|+++ ..+.+.+..+. .+. + .+ +++.|++|
T Consensus 167 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 245 (396)
T PRK09147 167 TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSK 245 (396)
T ss_pred cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhhhhccccCccccccEEEEecccc
Confidence 9999999999997 44 5677888899999999999994 44443331111 010 1 12 78899999
Q ss_pred c--cCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 306 S--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 306 ~--l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
. ++|.|.||+++++ ++.+++.........+.+...+.+++ .++.. ....++..+++.++++.+.+.|.+
T Consensus 246 ~~~~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~a~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 246 RSNVPGLRSGFVAGDA------ALLKKFLLYRTYHGCAMPPAVQAASI-AAWND--EAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred ccCCccceeeeecCCH------HHHHHHHHHhhhcccCCCHHHHHHHH-HHhcc--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5899999999987 66666544321111122222233222 23321 223466677788888888888876
Q ss_pred CCCEEecCCCCCeeEEEEecCCCCCHHHH-HHHHhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 384 LGYKLVSGGSDNHLVLVDLRPMGIDGARV-EKILDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 384 ~G~~v~~~gt~~~~~~vd~~~~g~~~~~~-~~~L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
. +.+..+ ..+.++|+++. .+..++ ..+|++.||.+..+...+.. .....+++||++.. .++++++
T Consensus 317 ~-~~~~~p-~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~------~~~~l~~ 385 (396)
T PRK09147 317 V-LDVQLP-DAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA------PLAECVE 385 (396)
T ss_pred h-cCCCCC-CeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC------CHHHHHH
Confidence 4 444333 23567788875 244555 44557899999543222110 11235789998642 3577887
Q ss_pred HHHHHHHHH
Q 010008 460 IADFIHEGV 468 (520)
Q Consensus 460 la~~i~~~l 468 (520)
..+.|.+.+
T Consensus 386 ~l~rl~~~~ 394 (396)
T PRK09147 386 AAERIVDFC 394 (396)
T ss_pred HHHHHHHHh
Confidence 777777654
No 95
>PRK06855 aminotransferase; Validated
Probab=99.92 E-value=1.9e-22 Score=214.15 Aligned_cols=344 Identities=17% Similarity=0.128 Sum_probs=214.9
Q ss_pred ccceEecCCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecC
Q 010008 94 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPL 166 (520)
Q Consensus 94 ~~i~Liasen-----~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~ 166 (520)
+.+.|..++. .+|+.+.+++...+.+.-..+|+. ..| ..++.+...+++.+.+|++ ++ +|.+|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G---~~~LReaia~~~~~~~g~~~~~~----~I~it 102 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCP---TKG---VLETREFLAELNNKRGGAQITPD----DIIFF 102 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCC---CCC---CHHHHHHHHHHHHhccCCCCCHh----HEEEc
Confidence 4577765554 578888888887664322223332 123 2355555557777777754 43 67779
Q ss_pred ChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-CC
Q 010008 167 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-RP 243 (520)
Q Consensus 167 sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~-~p 243 (520)
+|+ +|+..++. +++|||.|++.+|.|.++... .....| .+++.++++++ ++.+|+++|+++++.. ++
T Consensus 103 ~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~-------~~~~~g--~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 103 NGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSA-------EAAHAG--YPPVTYRLDPENNWYPDLDDLENKVKYNPSI 172 (433)
T ss_pred CcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHH-------HHHhcC--CeEEEEecccccCCCCCHHHHHHHHhcCCCc
Confidence 998 88887774 889999999999988653210 011123 36677777643 4679999999998742 57
Q ss_pred cEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC----Cc-ccEEEeccCccc--CCCC
Q 010008 244 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-CDVVTTTTHKSL--RGPR 311 (520)
Q Consensus 244 klIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~----~~-aDiv~~S~hK~l--~Gpr 311 (520)
+++++++|+||+ .++ +++|.++|+++|++||+|++ |..+.+.+....++ +. ..|++.|++|++ +|+|
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~-Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlR 251 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEI-YNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSR 251 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcce
Confidence 888888899997 454 56777889999999999998 55666544222222 11 237889999987 7999
Q ss_pred ceEEEeeCCC--cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 312 GGMIFFKKDP--VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 312 gG~I~~~~~~--~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
.||++++... .....+.+.+...... ..+.+.. ...+++.+++.-. ....++..+.+.++++.+.+.|.+. |+.
T Consensus 252 iG~ii~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~ 329 (433)
T PRK06855 252 CGWIEVYNADKDEVFKKYINSILNAKMI-EVCSTTL-PQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK 329 (433)
T ss_pred EEEEEEeCCchhhHHHHHHHHHHHhhcc-ccCCChH-HHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee
Confidence 9999984210 0000222333222111 1122233 3333333443210 1123566677788888899999764 666
Q ss_pred EecCCCCCeeEEEEecCCC--------------------------CCH-HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEE
Q 010008 388 LVSGGSDNHLVLVDLRPMG--------------------------IDG-ARVEKILDMASITLNKNSVPGDKSALVPGGI 440 (520)
Q Consensus 388 v~~~gt~~~~~~vd~~~~g--------------------------~~~-~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~gi 440 (520)
+..+ ..+.++|+++...- .+. +.+..+|++.||.+ .||+.......++
T Consensus 330 ~~~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v----~PG~~F~~~~~~~ 404 (433)
T PRK06855 330 VNRT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICV----VPLSSFCTELNGF 404 (433)
T ss_pred ccCC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEE----ecCCcCCCCCCce
Confidence 5433 23567788875320 112 33556788999999 6665421123469
Q ss_pred EEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 441 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 441 Rig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
||++.. .+++++++..+.|.+++..
T Consensus 405 Rls~~~-----~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 405 RVTLLE-----RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred EEEECC-----CcHHHHHHHHHHHHHHHHH
Confidence 999754 3478999999888888763
No 96
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=4.9e-23 Score=212.18 Aligned_cols=313 Identities=18% Similarity=0.184 Sum_probs=213.8
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +|+.+++++...+.+. .+|+. .. ..+++ +.++++++++++ +|.+++|+ +
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~------~~-~~~lr----~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPD------PD-PAELK----QALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCC------CC-HHHHH----HHHHHHhCcChH----HEEEcCCHHH
Confidence 45788777764 6889999998765322 12332 11 13343 677888998775 45567777 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.+++++||+|++++|.|+.+. ......|. +++.+++++ ++.+|++++++.+.+ ++++|+++.
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~--------~~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYE--------ISAKIHGA--EVVKVPLDE-DGQLDLEDILVAIDD-KPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHH--------HHHHHcCC--eEEEeccCC-CCCCCHHHHHHhcCC-CCCEEEEeC
Confidence 888888999999999999998764321 11223454 666777764 478999999998866 899999998
Q ss_pred CCCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC-c-ccEEEeccCccc--CCCCceEEEeeCCCc
Q 010008 251 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV 322 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~-~-aDiv~~S~hK~l--~GprgG~I~~~~~~~ 322 (520)
++||+ ..+.+++.++|+.+ |+++++|++|. ++...+.....+. . .+++++|+||++ +|+|.|++++++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--- 226 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--- 226 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence 88887 78999999999987 99999999965 3332211000111 1 247789999997 578889999987
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEE
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD 401 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd 401 (520)
++.+++.....+ .+.+ .....+...+++.. ..+++..+++.++++.+.+.|++. |+++..+ ...+++++
T Consensus 227 ---~~~~~~~~~~~~--~~~~-~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~g~~~~~~ 296 (346)
T TIGR01141 227 ---EIIDALNKVRAP--FNLS-RLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYPS--DANFVLIR 296 (346)
T ss_pred ---HHHHHHHhccCC--CCCC-HHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECCC--cCCEEEEe
Confidence 676766543322 1222 22233323334321 135677888889999999999885 8886543 34567777
Q ss_pred ecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 402 LRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 402 ~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
+.. +.+++.+.|.++||.+. ||.. +.. ++++|+++. +++|++++++.|
T Consensus 297 ~~~---~~~~~~~~L~~~gI~v~----~g~~f~~~-~~~iRls~~-------~~~~i~~~~~~l 345 (346)
T TIGR01141 297 FPR---DADALFEALLEKGIIVR----DLNSYPGL-PNCLRITVG-------TREENDRFLAAL 345 (346)
T ss_pred cCC---CHHHHHHHHHHCCeEEE----eCCCcCCC-CCeEEEecC-------CHHHHHHHHHHh
Confidence 653 56778888889999995 4432 122 678999854 378999888766
No 97
>PRK09148 aminotransferase; Validated
Probab=99.92 E-value=8.9e-22 Score=207.32 Aligned_cols=338 Identities=13% Similarity=0.085 Sum_probs=212.8
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs 169 (520)
..|+|..+++. +++.+++++.+.+.+....+|+. ..|. .++.+...+++.+.+|.+ ++ -+|.+|+|+
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~~---~~I~it~G~ 101 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKGI---PGLRRAQAAYYARRFGVKLNPD---TQVVATLGS 101 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCCC---HHHHHHHHHHHHHHhCCCCCCC---CcEEEcCCh
Confidence 45788776653 56888888877664322233443 1222 345555556777776754 42 156679998
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcCCcEEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~-~~iD~d~le~~i~~~~pklIi 247 (520)
+++..++.++++|||+|++++|.|.++.. .....|. ++++++++.++ +..+++++.+...+ ++++|+
T Consensus 102 ~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~l~~~~~~~~~-~~~~v~ 170 (405)
T PRK09148 102 KEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPDEEFFPALERAVRHSIP-KPIALI 170 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCCCCCccCHHHHHhhccc-cceEEE
Confidence 89999999999999999999998865421 1233455 56666665433 34455544433334 789999
Q ss_pred EcCCCCCC--CCCH---HHHHHHHHHhCCEEEEechhhcccccccc-cCCC--CCc---ccEEEeccCccc--CCCCceE
Q 010008 248 AGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY---CDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 248 ~~~s~~p~--~~d~---~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p--~~~---aDiv~~S~hK~l--~GprgG~ 314 (520)
++.|+||+ ..+. ++|.++|+++|++||+|+++ ..+.+.+. .++. ++. ..+++.|++|++ +|.|.||
T Consensus 171 l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~ 249 (405)
T PRK09148 171 VNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY-SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGF 249 (405)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheee
Confidence 99999997 5554 67888899999999999984 44443321 1111 111 225689999976 7899999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
+++++ ++.+.+.........+.+...+.++ ..+|... ....+...+++.++++.+.+.|.+.|+.+..+ ..
T Consensus 250 ~v~~~------~~i~~l~~~~~~~~~~~~~~~q~~~-~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~ 320 (405)
T PRK09148 250 AVGNE------RLIAALTRVKSYLDYGAFTPIQVAA-TAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPPP-AA 320 (405)
T ss_pred eeCCH------HHHHHHHHHHHHhccCCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC-Ce
Confidence 99977 6766665432211122222333332 2234321 12336667788889999999998888875443 23
Q ss_pred CeeEEEEecCC--CCCHHHHH-HHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPM--GIDGARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 395 ~~~~~vd~~~~--g~~~~~~~-~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.++|+++... .++..++. .+|++.||.+. ||.. +...++++||++. ...+++++..+.|.+++..
T Consensus 321 g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f~~~~~~~~Ri~~~------~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 321 SMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVA----PGVGFGEHGDGYVRIALV------ENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred eEEEEEECCCccCCCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHHH
Confidence 45678777531 12344554 45678999994 5543 2223578999874 2367777777777777654
Q ss_pred H
Q 010008 471 T 471 (520)
Q Consensus 471 ~ 471 (520)
.
T Consensus 391 ~ 391 (405)
T PRK09148 391 A 391 (405)
T ss_pred H
Confidence 3
No 98
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=5.7e-23 Score=213.38 Aligned_cols=311 Identities=16% Similarity=0.174 Sum_probs=215.0
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|.|..+||+ +|+.+++++.+.+.+.. .||.. | ..++. +.+++.+|++++ +|.+++|+ +
T Consensus 30 ~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~~----g---~~~Lr----~aia~~~~~~~~----~I~vt~Gs~e 92 (366)
T PRK01533 30 SFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPDG----G---ATTLR----QTIANKLHVKME----QVLCGSGLDE 92 (366)
T ss_pred ceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCCC----C---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56899999985 68899999987654321 24421 1 22333 566778899886 56678998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++++|.|.++.. .....|. +++.++++ ++.+|++++++++++ ++|+|+++.
T Consensus 93 ~i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (366)
T PRK01533 93 VIQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGC--EVKEVALN--NGVYDLDEISSVVDN-DTKIVWICN 159 (366)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCC--EEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEeC
Confidence 9999999999999999999997754421 2334565 56666664 457999999998877 899999999
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC----c-ccEEEeccCccc--CCCCceEEEeeC
Q 010008 251 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~----~-aDiv~~S~hK~l--~GprgG~I~~~~ 319 (520)
|+||+ .++.+++.++++. .+.++++|++++ .+...+..+..+. + --|++.|++|++ +|+|.||+++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~ 238 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH
Confidence 99997 6677666666553 134678899964 5543322122111 1 237889999986 789999999987
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 398 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~ 398 (520)
++.+.+.+...+ .+. +.....+...+|+ ..++ ++..+...++++.+.+.|...|+++..+ +..++
T Consensus 239 ------~~~~~l~~~~~~--~~~-~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~--~~nf~ 304 (366)
T PRK01533 239 ------ELIEKLNVVRLP--FNV-SSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQS--QTNFI 304 (366)
T ss_pred ------HHHHHHHHhcCC--CCc-CHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC--cCcEE
Confidence 677777654332 222 2223333333443 2334 5666777778888888888888886654 34567
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|+.+. +...+.+.|.++||.|.. + ++++||++. +.+|++++.++|++++..
T Consensus 305 ~~~~~----~~~~~~~~l~~~GI~Vr~---------~-~~~iRis~~-------~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 305 FLPVE----NGGEIYEACAHAGFIIRP---------F-PNGVRITVG-------TREQNEGVISVLQQHFEN 355 (366)
T ss_pred EEeCC----CHHHHHHHHHHCCcEEcc---------C-CCceEEeCC-------CHHHHHHHHHHHHHHHHh
Confidence 87763 356788889999999963 1 468999864 369999999999987653
No 99
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=5.5e-23 Score=210.79 Aligned_cols=318 Identities=18% Similarity=0.149 Sum_probs=200.9
Q ss_pred cCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 010008 100 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 177 (520)
Q Consensus 100 asen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~ 177 (520)
.|||+ +++.+++++...+.. + . + |+..+...+++ +++++++| +.+ .+.+.+|++|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-~----~--~-~~~~~~~~~l~----~~~a~~~g-~~~----~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-D----D--V-YGEDPTTAKLE----ARAAELFG-KEA----ALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-C----c--c-cCCCHHHHHHH----HHHHHHhC-CCe----EEEecCchHHHHHHHH
Confidence 36765 588999999765421 1 1 2 22233344444 67889999 332 4666788899999999
Q ss_pred hhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEEEEcCC
Q 010008 178 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 251 (520)
Q Consensus 178 all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~------~~pklIi~~~s 251 (520)
++++|||+|++.++.|.++..... .....|. +++.++.+ ++.+|+++|++++++ .++++|+++++
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999999887654321110 1123454 55666554 467999999999874 26899998888
Q ss_pred CCCC-C---CCHHHHHHHHHHhCCEEEEechhhcccc-cccccCCCC-CcccEEEeccCcccCCCCceEEEeeCCCcchh
Q 010008 252 AYPR-D---FDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 325 (520)
Q Consensus 252 ~~p~-~---~d~~~i~~ia~~~g~~li~D~Ah~~gli-~~~~~~~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~ 325 (520)
+|++ . .++++|.++|+++|+++++|+||..+.. ..+...... .++|+++.|+||+++.|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 7766 2 3577899999999999999999865432 112110111 26889999999999777666566666
Q ss_pred hHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC
Q 010008 326 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 405 (520)
Q Consensus 326 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~ 405 (520)
++.+++.....+ ..++.....+++.+ ++..+....+.++.+++.++++++.+.|.+.|+.+.. ...+++++.+...
T Consensus 211 ~~~~~~~~~~~~-~~~~~~~~~~~~~a-~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~~~ 286 (338)
T cd06502 211 DFIARARRRRKQ-AGGGMRQSGFLAAA-GLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPVEA 286 (338)
T ss_pred HHHHHHHHHHHH-hCCChhhHHHHHHH-HHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecCCc
Confidence 566665443211 11222222222211 2222223346667788899999999999988875433 2345566654321
Q ss_pred CCCHHHHHHHHh---hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 406 GIDGARVEKILD---MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 406 g~~~~~~~~~L~---~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
......+.+.|. +.||.+... ..+.||++.+..++ ++|++++++.+++
T Consensus 287 ~~~~~~l~~~l~~~~~~gi~~~~~---------~~~~lRi~~~~~~~----~~~i~~~~~~l~~ 337 (338)
T cd06502 287 NAVFVELSKEAIERRGEGVLFYAW---------GEGGVRFVTHWDTT----EEDVDELLSALKA 337 (338)
T ss_pred cHHHHHHHHHHHHhhhCCEEEEec---------CCCeEEEEeecCCC----HHHHHHHHHHHhc
Confidence 111112222222 579888431 12689998876544 7999999988764
No 100
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.91 E-value=3.3e-22 Score=209.80 Aligned_cols=331 Identities=17% Similarity=0.140 Sum_probs=211.7
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC----CCCCceeeecC
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD----ENKWGVNVQPL 166 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~----~~~~~~~V~~~ 166 (520)
...|+|..+++. +|+.+.+++.+.+... ..|+. ..| ..++.+...+++.+.+|.+ ++ -+|.++
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~---~~G---~~~lr~aia~~~~~~~~~~~~~~~~---~~i~it 96 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPT---TKG---LPELRQAIARWLERRFDLPTGVDPE---RHVLPV 96 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCC---CCC---CHHHHHHHHHHHHHhhCCcccCCCC---ceEEEC
Confidence 467888877764 6788999998765421 23432 112 2345555557777777654 32 156778
Q ss_pred ChH-HHHHHHHHhhCCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhhcC
Q 010008 167 SGS-PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFR 242 (520)
Q Consensus 167 sGs-~A~~~~l~all~pGD~--Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~-~~iD~d~le~~i~~~~ 242 (520)
+|+ +|+..++.++++|||. |++++|.|.++. ......|. +++.+++++++ +.+|++++++++.+ +
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 165 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYE--------GAALLAGA--EPYFLNCTAENGFLPDFDAVPESVWR-R 165 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchH--------HHHHhcCC--eEEEeeccccCCCCCCHHHHHHHHhh-c
Confidence 988 8999999999999996 888888765432 12334454 66777776443 57899999998877 8
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc--cCCCC---C--c---c--cEEEeccCc
Q 010008 243 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF---K--Y---C--DVVTTTTHK 305 (520)
Q Consensus 243 pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~--~~~p~---~--~---a--Div~~S~hK 305 (520)
+|+|+++.|+||+ .++ +++|.++|+++|++||+|+++ ..+.+.+. .++.+ . + . -+++.|++|
T Consensus 166 ~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 244 (393)
T TIGR03538 166 CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECY-SELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244 (393)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcch-hhcccCCCCCCcCHHHhcccccccccccEEEEecchh
Confidence 9999999999997 454 778888899999999999984 44443321 11111 0 1 1 178899999
Q ss_pred c--cCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 306 S--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 306 ~--l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
. ++|.|.||+++++ ++.+++.........+.+...+.+++ .++.. ....+...+++.++++.+.+.|.+
T Consensus 245 ~~~~~GlRvG~~i~~~------~l~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~ 315 (393)
T TIGR03538 245 RSNLPGLRSGFVAGDA------EILKAFLRYRTYHGCAMPIPTQLASI-AAWND--EQHVRENRALYREKFAAVLEILGQ 315 (393)
T ss_pred hcCCcccceEEEecCH------HHHHHHHHHHHhhccCcCHHHHHHHH-HHhcC--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 4899999999987 66666544322111222233333322 23321 223466677788888888888876
Q ss_pred CCCEEecCCCCCeeEEEEecCCCCCHHHHHHH-HhhcCeEEcCCCCCCCC---CCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 384 LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKI-LDMASITLNKNSVPGDK---SALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 384 ~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~-L~~~gI~v~~~~~Pg~~---~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
. +.+..+ ....++|+++. .+..++.+. ++++||.+..+...+.. .....+++||+... +++++++
T Consensus 316 ~-~~~~~p-~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~------~~~~l~~ 384 (393)
T TIGR03538 316 V-LDLELP-DAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA------PLEECVE 384 (393)
T ss_pred h-CcccCC-CeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC------CHHHHHH
Confidence 4 333322 23567788875 245555554 57899999543211110 12235689998642 3677887
Q ss_pred HHHHHHH
Q 010008 460 IADFIHE 466 (520)
Q Consensus 460 la~~i~~ 466 (520)
..+.|.+
T Consensus 385 ~l~~l~~ 391 (393)
T TIGR03538 385 AAERIRS 391 (393)
T ss_pred HHHHHHH
Confidence 7777765
No 101
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1.6e-22 Score=217.24 Aligned_cols=342 Identities=14% Similarity=0.114 Sum_probs=213.4
Q ss_pred ccceEecCCCCCh-HHHHHHHhhhhhc----c-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 010008 94 KSLELIASENFTS-RAVMEAVGSCLTN----K-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 163 (520)
Q Consensus 94 ~~i~Liasen~~~-~~V~ea~~s~l~~----~-y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg----~~~~~~~~~V 163 (520)
..|+|...||+.. +.+.+.+...... . -...|+..-+|+......++.+...+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 4589999999762 2223333332111 1 001233333344333345666666678888877 6665 56
Q ss_pred ecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhh-
Q 010008 164 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAI- 239 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~-~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~- 239 (520)
.+++|+ +|+..++.++++|||.|++++|.|+++.. .+. ..|. ++++++++. +++.+|++++++++.
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~--~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGV--EIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCC--EEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 678888 89999999999999999999998876531 122 2454 667777754 347899999976532
Q ss_pred ----hcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCCC--C-C-----c--cc--
Q 010008 240 ----LFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--F-K-----Y--CD-- 297 (520)
Q Consensus 240 ----~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p--~-~-----~--aD-- 297 (520)
..++|+|+++.|+||+ ..+ +++|.++|+++|++||+|+++ ..+++.+. +++. + . . .+
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~~~~f~~~~~~si~~l~~~~~~~~~~~~~v 271 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-AATVFAGGDFVSVAEVVNDVDISEVNVDLI 271 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-cccccCCCCcccHHHhhccccccccCCCeE
Confidence 1378999999999997 555 567788899999999999994 45444331 1110 1 0 0 13
Q ss_pred EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HH----HHHHH
Q 010008 298 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KV----YQNKV 370 (520)
Q Consensus 298 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~----~~~~i 370 (520)
+++.|++|.| +|.|.|+++++++ .+.+.+......+ ..+.. ...+++..|. ...| +. ..+++
T Consensus 272 ~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~~~~~~~--~vs~~-~Q~a~~~~L~---d~~~~~~~l~~~r~~l 340 (496)
T PLN02376 272 HIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCARKMSSFG--LVSSQ-TQLMLASMLS---DDQFVDNFLMESSRRL 340 (496)
T ss_pred EEEEeccccCCCCcceEEEEEECCH-----HHHHHHHHHhhcC--CCCHH-HHHHHHHHhC---ChhHHHHHHHHHHHHH
Confidence 3578999986 7999999999653 4544433221111 11222 2222222232 2233 33 35667
Q ss_pred HHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCC-----CH-HHHHH-HHhhcCeEEcCCCCCCCC-CCCCCCEEEE
Q 010008 371 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGI-----DG-ARVEK-ILDMASITLNKNSVPGDK-SALVPGGIRI 442 (520)
Q Consensus 371 ~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~-----~~-~~~~~-~L~~~gI~v~~~~~Pg~~-~~~~~~giRi 442 (520)
.++.+.+.+.|.+.|+.+..+ ....++|++++.... .. .++.+ ++++.||.+. ||.. ....++++||
T Consensus 341 ~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~----pGs~F~~~~~g~~Ri 415 (496)
T PLN02376 341 GIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVS----PGSSFRCTEPGWFRI 415 (496)
T ss_pred HHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEe----CccccCCCCCCEEEE
Confidence 777888888898888887654 234678889853211 11 23333 4566899994 5543 2224689999
Q ss_pred ccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 443 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 443 g~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
++.. +.++++++..+.|.+++...
T Consensus 416 ~fa~-----~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 416 CFAN-----MDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred EeeC-----CCHHHHHHHHHHHHHHHHHh
Confidence 8753 34688888888888887643
No 102
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=5.8e-22 Score=206.17 Aligned_cols=316 Identities=17% Similarity=0.150 Sum_probs=209.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
..+.+.+++...+... .|.++ +|.+. ..+++.+++++++++|+++++ .+...+|++++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLAR 101 (373)
T ss_pred chHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHHh
Confidence 4455677776654432 34443 23332 345556779999999998642 1333455588887776653
Q ss_pred --CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 010008 181 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 256 (520)
Q Consensus 181 --~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~ 256 (520)
++||+|+++++.|.+. . +.+...|. +++.++++ +++.+|++++++++++ ++..+++..+++++ .
T Consensus 102 ~~~~g~~vl~~~~~h~~~---~-----~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~~ 169 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSF---E-----KAAEMLGL--ELRYAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQI 169 (373)
T ss_pred ccCCCcEEEECCcchHHH---H-----HHHHHcCC--eEEEEeeC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCcc
Confidence 4789999988765431 1 12344565 55555565 4678999999999977 66444433344444 7
Q ss_pred CCHHHHHHHHHHhCCEEEEechhhcccccc---ccc--CCCC--CcccEEEeccCcccCCC-Cce-EEEeeCCCcchhhH
Q 010008 257 FDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPF--KYCDVVTTTTHKSLRGP-RGG-MIFFKKDPVLGVEL 327 (520)
Q Consensus 257 ~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~--~~p~--~~aDiv~~S~hK~l~Gp-rgG-~I~~~~~~~~~~~l 327 (520)
.|+++|.++|+++|+++++|+||..+.+.. +.. ...+ .++|++++|+|||+.+| ++| +++.++ ++
T Consensus 170 ~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------~~ 243 (373)
T TIGR03812 170 DDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------SY 243 (373)
T ss_pred CCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH------HH
Confidence 899999999999999999999987554321 111 1111 26899999999986544 445 444454 55
Q ss_pred HHhhcccCCCC--------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 328 ESAINNAVFPG--------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 328 ~~~i~~~~~p~--------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
.+.+... .|. .+|+++...++++..+++.+...++++..++..+++++|.+.|++.|+..+.++ ..+++.
T Consensus 244 ~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~ 321 (373)
T TIGR03812 244 LKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIEP-VLNIVA 321 (373)
T ss_pred Hhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCC-CceEEE
Confidence 5544321 121 125666667778878888776667788889999999999999999887654332 234455
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
+.+. +...+.+.|.+.||.+.... .+..||++++..+ +++|++++++.|++
T Consensus 322 ~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~----t~edid~l~~~L~~ 372 (373)
T TIGR03812 322 FEVD----DPEEVRKKLRDRGWYVSVTR--------CPKALRIVVMPHV----TREHIEEFLEDLKE 372 (373)
T ss_pred EEeC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCC----CHHHHHHHHHHHhh
Confidence 4432 34678888988999985421 2468999887554 48999999999865
No 103
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=3.5e-22 Score=207.81 Aligned_cols=319 Identities=17% Similarity=0.104 Sum_probs=216.4
Q ss_pred cceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 010008 95 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 95 ~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A 171 (520)
.|+|..+|+. +++.+++++...+... .+|+.. . ...++ +.+++.++++++ +|.+++|+ ++
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~------~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEI--WKYGDP------E-NHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC------c-cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 3688888874 6889999988765322 234321 1 23444 566777898875 67779999 78
Q ss_pred HHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 172 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
+..++.++++|||.|++.+|.|.+... .+...|. +++.++++. ..+|++++++.+...++|+|+++.|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEeCC
Confidence 888888889999999999987754421 1223454 556666652 3689999987776558999999889
Q ss_pred CCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC--c-ccEEEeccCccc--CCCCceEEEeeCCCc
Q 010008 252 AYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV 322 (520)
Q Consensus 252 ~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~--~-aDiv~~S~hK~l--~GprgG~I~~~~~~~ 322 (520)
+||+ ..+.+++.++++.. |++||+|+++ ..+...+... ++. . --+++.|++|++ +|.|.||+++++
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y-~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--- 239 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAY-CETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP--- 239 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence 9987 77887777777654 8999999994 3444333211 221 1 127789999987 689999999987
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEE
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 401 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd 401 (520)
++.+.+.....+ .+. +....++...+|+ ... .++..+.+.++++.+.+.|++.|+.+... ..++++++
T Consensus 240 ---~~~~~l~~~~~~--~~~-s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p~--~~~f~~~~ 308 (369)
T PRK08153 240 ---GTIKAFDKVRNH--FGM-NRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLTPLPS--ATNFVAID 308 (369)
T ss_pred ---HHHHHHHHhhcC--CCC-CHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--cCcEEEEE
Confidence 666665543322 222 3333333333453 223 36667778888888989898888865433 34567777
Q ss_pred ecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 402 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 402 ~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.........+.+.|.+.||.+.. |+.. ..++++||++. +++|++++.+.+++++..
T Consensus 309 ~~~~~~~a~~l~~~l~~~Gi~v~~---p~~~--~~~~~iRis~~-------~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 309 CGRDGAFARAVLDGLIARDIFVRM---PGVA--PLDRCIRVSCG-------PDEELDLFAEALPEALEA 365 (369)
T ss_pred CCCCcccHHHHHHHHHHCCeEEee---CCCC--CCCCeEEEecC-------CHHHHHHHHHHHHHHHHH
Confidence 643333456777778889999942 4331 13568999864 379999999999988764
No 104
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.91 E-value=4.6e-22 Score=209.70 Aligned_cols=343 Identities=14% Similarity=0.083 Sum_probs=216.6
Q ss_pred hccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeee
Q 010008 93 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQ 164 (520)
Q Consensus 93 ~~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~ 164 (520)
.+.|+|..++. .+|+.+.+++...+......+|+. ..|. .++.+...+++.+.+|. +++ +|.
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~~~----~I~ 101 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGI---LPARRAIADYLSNDLPYQLSPD----DVY 101 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCC---HHHHHHHHHHHHhhcCCCCCHh----hEE
Confidence 46688876553 578889999887776432223421 1122 24444555677666654 454 566
Q ss_pred cCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcC
Q 010008 165 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFR 242 (520)
Q Consensus 165 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~~~ 242 (520)
+++|+ +|+..++.++++|||.|++++|.|.++.. .....|. +++.+++++ +++.+|++++++++++ +
T Consensus 102 it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~ 170 (409)
T PLN00143 102 LTLGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-N 170 (409)
T ss_pred EecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-C
Confidence 78888 89999999999999999999998765421 2234454 556666643 3467999999998876 7
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----c-ccEEEeccCcc--cCCC
Q 010008 243 PKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKS--LRGP 310 (520)
Q Consensus 243 pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~-aDiv~~S~hK~--l~Gp 310 (520)
+++++++.|+||+ .++ +++|.++|+++|+++|+|++ |..+++.+....++. . .-+++.|++|+ ++|+
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 249 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEV-YGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW 249 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcc-ccccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc
Confidence 8888888899997 555 67788889999999999999 556665432212221 1 12788999998 4899
Q ss_pred CceEEEeeC-CC-cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEE
Q 010008 311 RGGMIFFKK-DP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 388 (520)
Q Consensus 311 rgG~I~~~~-~~-~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v 388 (520)
|.||+++++ +. ....+..+.+.....+.. ..+.. ..++++.+|+......+++..+++.++++.+.+.|.+.+...
T Consensus 250 RvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 327 (409)
T PLN00143 250 GLGWLVTCDPSGLLQICEIADSIKKALNPAP-FPPTF-IQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIM 327 (409)
T ss_pred ceEEEEeeCchhhhhhHHHHHHHHHHHhccC-CCCch-HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 999999943 20 000011222222221111 11222 233333344321112457778888888888888887754322
Q ss_pred -ecCCCCCeeEEEEecCC---CC-CH-HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 389 -VSGGSDNHLVLVDLRPM---GI-DG-ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 389 -~~~gt~~~~~~vd~~~~---g~-~~-~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
........++|+++... ++ +. +.+.++|.+.||.+ .||... ..++++||+.. .+++++++..+
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v----~pg~~f-~~~~~iRi~~~------~~~~~l~~al~ 396 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLII----LPGVTV-GLKNWLRITFA------VEQSSLEDGLG 396 (409)
T ss_pred CCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEE----eCcccc-CCCCeEEEEEc------CCHHHHHHHHH
Confidence 22222356778888531 22 33 34556778999999 455431 13578999864 23688888888
Q ss_pred HHHHHHHH
Q 010008 463 FIHEGVEI 470 (520)
Q Consensus 463 ~i~~~l~~ 470 (520)
.|.++++.
T Consensus 397 rl~~~l~~ 404 (409)
T PLN00143 397 RLKSFCGR 404 (409)
T ss_pred HHHHHHHH
Confidence 88877653
No 105
>PLN02721 threonine aldolase
Probab=99.91 E-value=4.7e-22 Score=205.11 Aligned_cols=324 Identities=18% Similarity=0.177 Sum_probs=205.3
Q ss_pred cceEecCCC-CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 95 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 95 ~i~Liasen-~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
.++|..+++ ++++.+++++...-.. ....||. +..+++| +.+++++|.+. .+.+++|++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~~~~------~~~~~~~--~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~ 69 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANAEVD------DDVLGYD--PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNL 69 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhccCC------CcccCCC--HHHHHHH----HHHHHHhCCce-----eEEecCccHHHH
Confidence 356666654 4678899988643011 1112332 2355666 67888999875 244578998888
Q ss_pred HHHHhhCC-CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh------cCCcEE
Q 010008 174 EVYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLI 246 (520)
Q Consensus 174 ~~l~all~-pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~------~~pklI 246 (520)
+++.++++ |||+|++.+++|.+.+..+. .....|. +++.++.+ +++.+|+|++++.+++ .++|+|
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 88888887 99999999987532211100 1223343 66666665 4578999999999973 178988
Q ss_pred EEcC-CCCCC--CCC---HHHHHHHHHHhCCEEEEechhhccccc-ccccCCCC-CcccEEEeccCcccCCCCceEEEee
Q 010008 247 IAGA-SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFK 318 (520)
Q Consensus 247 i~~~-s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~-~~~~~~p~-~~aDiv~~S~hK~l~GprgG~I~~~ 318 (520)
+++. +++|+ ..| +++|.++|+++|+++++|++|..+... .+..+..+ .++|.++.|+||++++|.||+++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 8864 56654 344 789999999999999999997654321 12211111 2688889999999988877666666
Q ss_pred CCCcchhhHHHhhcccCCCCCCCCChH-HHHHHHH-HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEE-ecCCCC
Q 010008 319 KDPVLGVELESAINNAVFPGLQGGPHN-HTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL-VSGGSD 394 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~~g~p~~-~~iaala-~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v-~~~gt~ 394 (520)
+ ++.+.+...... ..+++.. ...++.+ .+++. ..+..++..++++.+.+.|.+. |+++ +.+ ..
T Consensus 222 ~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 288 (353)
T PLN02721 222 K------SFIRKAKRLRKT-LGGGMRQVGVLAAAALVALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVAA-VE 288 (353)
T ss_pred H------HHHHhHHHHHHh-cCCCeehhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecCC-cc
Confidence 6 565544322111 1112111 1111111 12322 1223445567788899999885 7765 333 23
Q ss_pred CeeEEEEecC-CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 395 ~~~~~vd~~~-~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+++++++.. .+.+...+.+.|.+.||.+. |+ .+.+||++++.. .+++|++++++.|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~----~~-----~~~~lR~~~~~~----~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 289 TNIVYFDITDGSRITAEKLCKSLEEHGVLLM----PG-----NSSRIRVVTHHQ----ISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ceEEEEEccCCccccHHHHHHHHHhCCcEEe----cC-----CCceEEEEecCc----CCHHHHHHHHHHHHHHhh
Confidence 4566777643 12467788889999999995 33 246899987533 458999999999988653
No 106
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2e-22 Score=208.82 Aligned_cols=314 Identities=19% Similarity=0.168 Sum_probs=214.7
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +++.|++++...+.. . ..||. ....+++ +.++++++++++ +|.+++|+ +
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~~p~-------~g~~~lr----~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L-ALYPD-------GYAPELR----TKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC-------CcHHHHH----HHHHHHhCCCHH----HEEECCCHHH
Confidence 55788777764 578899998776542 1 11222 1123343 567778898875 56678888 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.+++++||+|++++|.|++... .....|. +++.++++ ++.+|++++++.+++ ++++++++.
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~--------~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH--------NAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 8888888999999999999998754321 2233454 55566665 467999999998877 899999888
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC-----cccEEEeccCccc--CCCCceEEEeeC
Q 010008 251 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~-----~aDiv~~S~hK~l--~GprgG~I~~~~ 319 (520)
|+||+ ..+.+++.++++. +|+++|+|+++. .+...+..+.++. ...+++.|++|++ +|.|.||+++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 99987 7789999999887 599999999954 3333322222211 1347889999987 589999999987
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 398 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~ 398 (520)
++.+.+.....+ .+.+...+.+ ...+++ ...+ ++..+...++++.+.+.|.+.|+.+..++ ..++
T Consensus 239 ------~~~~~~~~~~~~--~~~~~~~q~~-~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--g~~i 304 (359)
T PRK03158 239 ------ELIEKLNIARPP--FNTTRIAQYA-AIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGLFYYPSQ--TNFI 304 (359)
T ss_pred ------HHHHHHHHhcCC--CCCCHHHHHH-HHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCCc--CcEE
Confidence 677766554322 2333333333 333443 2233 55566677778888888888888776443 3466
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
|+++. .+..++.+.|.+.||.+. ||+... .++++||++. +.+|++++.+.|+++
T Consensus 305 ~~~~~---~~~~~~~~~l~~~gv~v~----~g~~f~-~~~~iRi~~~-------~~~~~~~l~~al~~~ 358 (359)
T PRK03158 305 FVDTG---RDANELFEALLKKGYIVR----SGAALG-FPTGVRITIG-------LKEQNDKIIELLKEL 358 (359)
T ss_pred EEECC---CCHHHHHHHHHHCCeEEe----eCCCCC-CCCeEEEecC-------CHHHHHHHHHHHHHh
Confidence 77663 356777788888999995 443311 2578999854 379999999999875
No 107
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=2.1e-22 Score=213.87 Aligned_cols=275 Identities=15% Similarity=0.157 Sum_probs=188.7
Q ss_pred eeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh
Q 010008 162 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 240 (520)
Q Consensus 162 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~ 240 (520)
+|.+++|+ +|+..++.++++|||.|++.+|.|.++.. .+...|. +++.++++. + .+|+++++++++.
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~ 210 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ 210 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc
Confidence 56778998 89999999999999999999998765531 2344565 667777763 2 4899999999877
Q ss_pred cCCcEEEEc-CCCCCC--CCCHH---HHHHHHHHh-CCEEEEechhhcccccccccCCCCCc---ccEEEeccCccc-CC
Q 010008 241 FRPKLIIAG-ASAYPR--DFDYP---RMRQIADAV-GALLMMDMAHISGLVAASVVADPFKY---CDVVTTTTHKSL-RG 309 (520)
Q Consensus 241 ~~pklIi~~-~s~~p~--~~d~~---~i~~ia~~~-g~~li~D~Ah~~gli~~~~~~~p~~~---aDiv~~S~hK~l-~G 309 (520)
++|+++++ .|+||+ .++.+ +|.++|+++ +++||+|++ |..+...+ ...++.. --+++.|++|++ +|
T Consensus 211 -~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~-Y~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~G 287 (431)
T PRK15481 211 -GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDH-FALLSSSP-YHSVIPQTTQRWALIRSVSKALGPD 287 (431)
T ss_pred -CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCc-hhhhccCC-CCCCCcCCCCCEEEEeeeccccCCC
Confidence 89998887 899997 56654 889999999 999999998 44444322 1222221 227889999987 78
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHHHHHHHHHHCCCEE
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKL 388 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~i~~na~~l~~~L~~~G~~v 388 (520)
+|.||++.++ ++.+.+.........+.+.. ...+++.+|+.-. ....++..+.+.++++.+.+.|.+.|+.+
T Consensus 288 lRiG~~i~~~------~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~ 360 (431)
T PRK15481 288 LRLAFVASDS------ATSARLRLRLNSGTQWVSHL-LQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAI 360 (431)
T ss_pred ceeEEEeCCH------HHHHHHHHHHhccccCCCHH-HHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 8889999987 66666654322222222222 3333333454210 01135567788888999999998888876
Q ss_pred ecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 389 VSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 389 ~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
..+ ..+.++|+++.. +..++.+.|.++||.+..+...+. ....+++||++.. .+++++++.++.|.+++
T Consensus 361 ~~p-~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~pg~~f~~--~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 361 PSP-GDGLNLWLPLDT---DSQATALTLAKSGWLVREGEAFGV--SAPSHGLRITLST-----LNDAEINRLAADLHQAL 429 (431)
T ss_pred ccC-CCeEEEEEECCC---CHHHHHHHHHHCCcEEecCCcccc--CCCCCeEEEEcCC-----CChHHHHHHHHHHHHHh
Confidence 433 235677888753 356677778889999954321111 1123579998754 34789999999998876
Q ss_pred H
Q 010008 469 E 469 (520)
Q Consensus 469 ~ 469 (520)
.
T Consensus 430 ~ 430 (431)
T PRK15481 430 N 430 (431)
T ss_pred c
Confidence 4
No 108
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=2.8e-22 Score=214.48 Aligned_cols=344 Identities=17% Similarity=0.136 Sum_probs=215.6
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhc----cCC-C-CCCCCCCCCcchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTN----KYS-E-GLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 163 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~----~y~-~-G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg----~~~~~~~~~V 163 (520)
..|+|..+||..+..+++.......+ .+. . -.....+|+.......+.+...+++.+.+| ++++ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 45999999998665555544333211 000 0 000111122222234566566677777766 4554 57
Q ss_pred ecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCC-CCCCCCHHHHHHHhhh
Q 010008 164 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 240 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~-~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~ 240 (520)
.+++|+ +++..++.++++|||.|++++|.|.++.. .+. ..|. ++++++++. +++.+|++++++++++
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGV--EIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCc--EEEEEecCCccCCcCCHHHHHHHHHH
Confidence 779998 89999999999999999999998765421 122 2454 677777653 3567899999988764
Q ss_pred -----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC------------cc-
Q 010008 241 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK------------YC- 296 (520)
Q Consensus 241 -----~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~------------~a- 296 (520)
.++|+|++++|+||+ ..+ +++|.++|+++|++||+|++ |+++.+.+. ..+.+. ..
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~-Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~ 263 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEI-YSGTVFDSPGFVSVMEVLKDRKLENTDVSNR 263 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcc-ccccccCCCCcccHHHHhhhcccccCCCCCc
Confidence 378999999999997 444 66778889999999999998 455444331 111110 11
Q ss_pred cEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc--CchhHHHHHHHHH
Q 010008 297 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVVS 372 (520)
Q Consensus 297 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~i~~ 372 (520)
-+++.|++|.+ +|.|.||++++++ .+.+.+.+.. .. ...+.. ...+++.+|+.-. ...+++..+++.+
T Consensus 264 vi~l~S~SK~~~l~GlRiG~li~~~~-----~l~~~~~~~~-~~-~~~s~~-~Q~a~~~~L~~~~~~~~~l~~~~~~l~~ 335 (468)
T PLN02450 264 VHIVYSLSKDLGLPGFRVGAIYSNDE-----MVVSAATKMS-SF-GLVSSQ-TQYLLSALLSDKKFTKNYLEENQKRLKQ 335 (468)
T ss_pred EEEEEeccccCCCCCccEEEEEECCH-----HHHHHHHHHh-hc-CCCCHH-HHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 16789999976 8999999999863 3444443321 11 122222 2233333343210 0123556778888
Q ss_pred HHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC----CCCH-H-HHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccC
Q 010008 373 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDG-A-RVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSP 445 (520)
Q Consensus 373 na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~----g~~~-~-~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~ 445 (520)
+++.+.+.|.+.|+.+..+ ..+.++|+++... .... . .+.++|+++||.+ .||.. +...++++||++.
T Consensus 336 rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v----~PG~~f~~~~~g~~Rl~f~ 410 (468)
T PLN02450 336 RQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNI----SPGSSCHCTEPGWFRVCFA 410 (468)
T ss_pred HHHHHHHHHHHcCCcccCC-CceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEE----eCccccCCCCCCEEEEEec
Confidence 8889999999888876543 2355778887521 1111 1 2444567899999 45543 2234679999875
Q ss_pred CccccCCCHHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
. .+++++++..+.|.+++..
T Consensus 411 ~-----~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 411 N-----MSEETLDLAMKRLKSFVES 430 (468)
T ss_pred C-----CCHHHHHHHHHHHHHHHHh
Confidence 3 2468899998888887753
No 109
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.91 E-value=7.8e-22 Score=207.53 Aligned_cols=340 Identities=16% Similarity=0.101 Sum_probs=211.7
Q ss_pred hccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCceeee
Q 010008 93 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ 164 (520)
Q Consensus 93 ~~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg--~~~~~~~~~V~ 164 (520)
++.++|..++. .+++.+++++...+......+|.. ..| ..++.+...+++.+ .+ ++++ +|.
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g---~~~lr~aia~~~~~-~~~~~~~~----~i~ 99 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVG---ALSAREAIASYYHN-PDGPIEAD----DVV 99 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCC---CHHHHHHHHHHHhh-cCCCCCHH----HEE
Confidence 35588876553 367889999987766432223421 112 23444333334333 22 4444 566
Q ss_pred cCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 010008 165 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 242 (520)
Q Consensus 165 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~ 242 (520)
+++|+ +|+..++.++++|||+|++++|.|..+. ......|. +++.++++.+ ++.+|++.+++.++. +
T Consensus 100 ~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~--------~~~~~~g~--~v~~~~~~~~~~~~~d~~~l~~~~~~-~ 168 (401)
T TIGR01264 100 LCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE--------TLAESMGI--EVKLYNLLPDKSWEIDLKQLESLIDE-K 168 (401)
T ss_pred ECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH--------HHHHHcCC--EEEEeecCCccCCCCCHHHHHHHhcc-C
Confidence 68887 9999999999999999999998765432 12334454 5556666533 478999999998876 7
Q ss_pred CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cc-cEEEeccCcc--cCCC
Q 010008 243 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YC-DVVTTTTHKS--LRGP 310 (520)
Q Consensus 243 pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~a-Div~~S~hK~--l~Gp 310 (520)
+++|++++|+||+ .. ++++|.++|+++|+++++|++ |.++.+.+....++. .. -|++.|++|+ ++|.
T Consensus 169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 247 (401)
T TIGR01264 169 TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEI-YGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW 247 (401)
T ss_pred ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhh-hhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence 8999999999987 43 478889999999999999999 456554432111221 11 2678999997 4899
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEe
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 389 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~ 389 (520)
|.||+++++......++.+.+.....+. .+. +.....++..+|.......+++..+++.++++.+.+.|.+. |+.+.
T Consensus 248 RiG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 325 (401)
T TIGR01264 248 RLGWIIIHDRRGILRDIRDGLVKLSQRI-LGP-CTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV 325 (401)
T ss_pred eEEEEEecCcchhHHHHHHHHHHHhhcc-CCC-CcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 9999998752100012333333221111 121 22233333334543112334677788888899999999885 66644
Q ss_pred cCCCCCeeEEEEecC----CCCCHHHHHH-HHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 390 SGGSDNHLVLVDLRP----MGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 390 ~~gt~~~~~~vd~~~----~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
.+ ....++|+++.. ...+..++.+ +++++||.+ .||+.. ..++++||++. ..++++++..+.|
T Consensus 326 ~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v----~pg~~f-~~~~~iRis~~------~~~~~l~~~l~rl 393 (401)
T TIGR01264 326 MP-SGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFC----LPGSCF-EYPGFFRVVLT------VPVVMMEEACSRI 393 (401)
T ss_pred CC-CeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEE----eCchhc-CCCCeEEEEEc------CCHHHHHHHHHHH
Confidence 33 235677888642 1124455544 457899999 455431 13679999864 2367777777777
Q ss_pred HHHHH
Q 010008 465 HEGVE 469 (520)
Q Consensus 465 ~~~l~ 469 (520)
.+.++
T Consensus 394 ~~~~~ 398 (401)
T TIGR01264 394 QEFCE 398 (401)
T ss_pred HHHHh
Confidence 76654
No 110
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.6e-22 Score=207.38 Aligned_cols=317 Identities=20% Similarity=0.188 Sum_probs=215.5
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +++.+++++.+.+.+.. .+||.. | ..++ ++.++++++++++ +|.+++|+ +
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~---~~~l----r~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N---ADAL----RQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c---HHHH----HHHHHHHhCCCHH----HEEEcCCHHH
Confidence 56889888875 47889999987665322 234421 1 1233 3677788898876 56779998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
|+..++.++++|||+|++++|.|..+. ......|. +++.++++ +++.+|++++++ +.++|++++
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYP--------VYAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHH--------HHHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 999999999999999999998764331 11234455 56666665 457899999863 457888889
Q ss_pred CCCCC--CCCHHHHHHHHHHh-CCEEEEechhhcccccccccCCCC-C--cccEEEeccCccc--CCCCceEEEeeCCCc
Q 010008 251 SAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF-K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 322 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~-g~~li~D~Ah~~gli~~~~~~~p~-~--~aDiv~~S~hK~l--~GprgG~I~~~~~~~ 322 (520)
|+||+ ..+.+++.++++.+ ++++++|++|. .+. +....++ . ...+++.|++|++ +|+|.||+++++
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~--~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--- 226 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG--GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--- 226 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC--CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH---
Confidence 99987 78999999999876 99999999863 221 1111111 1 2348889999975 789999999876
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEe
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 402 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~ 402 (520)
++.+++..........+.+.....++..++.. ...+++..+++.++++.+.+.|++.|+.+..++ .+++|+.+
T Consensus 227 ---~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~ 299 (353)
T PRK05387 227 ---ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLPSK--ANFVFARH 299 (353)
T ss_pred ---HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECCCc--CcEEEEEC
Confidence 67666654322111122233333333334431 123467778888899999999998888765432 45566665
Q ss_pred cCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 403 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 403 ~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
. +.+..++.+.|.+.||.+... +. +..++++|+++. ++++++++.+.|++++.
T Consensus 300 ~--~~~~~~~~~~l~~~gi~v~~~---~~--~~~~~~iRis~~-------~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 300 P--SHDAAELAAKLRERGIIVRHF---NK--PRIDQFLRITIG-------TDEEMEALVDALKEILA 352 (353)
T ss_pred C--CCCHHHHHHHHHHCCEEEEEC---CC--CCCCCeEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 4 456777888888999999531 11 123578999864 36899999999988754
No 111
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=1.9e-21 Score=204.23 Aligned_cols=335 Identities=16% Similarity=0.128 Sum_probs=212.0
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs 169 (520)
+.++|..+.. .+++.+.+++...+.+....+|+. ..| ..++++...+++.+.+|.. ++ .+|.+++|+
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~~---~~i~~t~G~ 100 (395)
T PRK08175 30 DIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST---SRG---IPRLRRAISRWYQDRYDVDIDPE---SEAIVTIGS 100 (395)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCC---CcEEEccCc
Confidence 4566654432 245667777766554332223432 122 3355555567777776764 32 146678998
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLI 246 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklI 246 (520)
+++..++.++++|||+|++++|.|..+.. .....|. +++.++++++ ..+.++++++++.. ++|+|
T Consensus 101 ~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v 168 (395)
T PRK08175 101 KEGLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKMM 168 (395)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceEE
Confidence 88888888999999999999998765421 1233454 6667767643 23578888877642 68999
Q ss_pred EEcCCCCCC--CCCH---HHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-ccc--EEEeccCccc--CCCCce
Q 010008 247 IAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD--VVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 247 i~~~s~~p~--~~d~---~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~aD--iv~~S~hK~l--~GprgG 313 (520)
+++.|+||+ ..+. ++|.++|+++|+++|+|+++ ..+.+.+....++ . ..| +++.|++|++ +|.|.|
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG 247 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAY-ADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch-HhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhe
Confidence 998888887 5565 78889999999999999985 3444433221111 1 123 6679999987 788999
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCC
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 393 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt 393 (520)
|++.++ ++.+++.+.......+.....+.++ ..++... ....+...+.+.++++++.+.|++.|+.+..+ .
T Consensus 248 ~~~~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~ 318 (395)
T PRK08175 248 FMVGNP------ELVSALARIKSYHDYGTFTPLQVAA-IAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMP-K 318 (395)
T ss_pred eeeCCH------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-C
Confidence 999887 6766654432111122222323322 2334321 12345667778888899999998888876543 2
Q ss_pred CCeeEEEEecCC--CCCHHHHHH-HHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 394 DNHLVLVDLRPM--GIDGARVEK-ILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 394 ~~~~~~vd~~~~--g~~~~~~~~-~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
...++|+++... .++..++.+ +++++||.|.. |.. +...++++||++. ..++.+++..+.|.+++.
T Consensus 319 ~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p----~~~f~~~~~~~lRis~~------~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 319 ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSP----GIGFGDYGDTHVRFALI------ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeC----chhhCcCCCCeEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 356778887532 123555554 56789999954 432 2223568999863 236778877777777664
No 112
>PRK09105 putative aminotransferase; Provisional
Probab=99.91 E-value=4e-22 Score=207.37 Aligned_cols=311 Identities=16% Similarity=0.119 Sum_probs=212.1
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.+.|..++|+ +|+.+++++...+... ..||. .. .+++. +.+++.+|++++ +|.+++|+ +
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~Lr----~aia~~~~v~~e----~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAALS--GRYDL------EL-EDDLR----TLFAAQEGLPAD----HVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCC------ch-HHHHH----HHHHHHhCcChh----hEEEcCChHH
Confidence 55788888874 6899999998765421 12331 11 33343 566778899886 56668888 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++++|.|.++.. .....|. +++.++++ +++.+|++++++. .+ +++++++++
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~-~~-~~~~v~l~n 173 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGA--PVAKVPLR-ADGAHDVKAMLAA-DP-NAGLIYICN 173 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEecCC-CCCCCCHHHHHhc-CC-CCCEEEEeC
Confidence 9999999999999999999998765421 2334555 66666666 3578999999876 34 789999999
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC----ccc-EEEeccCccc--CCCCceEEEeeC
Q 010008 251 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~----~aD-iv~~S~hK~l--~GprgG~I~~~~ 319 (520)
|+||+ ..+.+++.++++. +|+++|+|+++. .+.. .++... +.+ +++.|++|++ +|+|.||+++++
T Consensus 174 P~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~ 249 (370)
T PRK09105 174 PNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP 249 (370)
T ss_pred CCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH
Confidence 99997 7788888888764 489999999963 3221 111111 234 6678999986 789999999987
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+++... . .... +.....+...+|.. ....++..+++.++++.+.+.|.+.|+.+..+ ...+++
T Consensus 250 ------~~i~~l~~~-~--~~~~-~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~~f~~ 315 (370)
T PRK09105 250 ------DLLAKLARF-G--HNPL-PVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTPS--QANCFM 315 (370)
T ss_pred ------HHHHHHHhc-C--CCCc-CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC--CCcEEE
Confidence 676666553 1 1122 22222222234432 12336667788889999999999888876653 233445
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+++. .+..++.+.|.+.||.+... .+ ..++++||++. ++++++++.+.+++++
T Consensus 316 ~~~~---~~~~~l~~~L~~~gI~v~~~-~~-----~~~~~~Ris~~-------~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 316 VDVK---RPAKAVADAMAKQGVFIGRS-WP-----IWPNWVRVTVG-------SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EeCC---CCHHHHHHHHHHCCcEEecC-CC-----CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 6653 35677777777889999422 11 12579999864 3688999999888765
No 113
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.91 E-value=7.1e-22 Score=202.91 Aligned_cols=318 Identities=21% Similarity=0.229 Sum_probs=225.7
Q ss_pred ccceEecCCCCC--hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChH-
Q 010008 94 KSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Liasen~~--~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg-~~~~~~~~~V~~~sGs- 169 (520)
..+.|..+||+. |+.+.+++...+. . .+-||.. . ..+++ +.+++.+| .+++ +|.++.|+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~-~-~~rYPd~------~-~~~l~----~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD-K-LNRYPDP------D-YRELR----AALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH-h-hccCCCC------c-HHHHH----HHHHHHhCCCCcc----eEEEcCChH
Confidence 358899999974 5888888877654 1 1224431 1 22333 56778888 6664 67789999
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+.+..++.+++.|||+|+++.|+|+.+- ......|. +++.+++++ +.+|++.+.+.+.+ ++++|+++
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~Ptf~~Y~--------~~a~~~g~--~~~~v~~~~--~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPEPTFSMYE--------IAAQLAGA--EVVKVPLKE--FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcCCChHHHH--------HHHHhcCC--eEEEecccc--cccCHHHHHHhhhc-CCCEEEEe
Confidence 8888999999999999999999876442 12334555 666766663 89999999999988 89999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCCccc--EEEeccCcc--cCCCCceEEEeeCCC
Q 010008 250 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKS--LRGPRGGMIFFKKDP 321 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~~aD--iv~~S~hK~--l~GprgG~I~~~~~~ 321 (520)
+||||+ .++.++|.+++... +++|++|+| |..+....... .+.+.+ +++-|++|. |+|.|.|+++.++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEA-Y~eF~~~~~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~-- 228 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEA-YIEFSPESSLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP-- 228 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc-hhhcCCchhhh-hccCCCCEEEEEecHHhhhcchhceeeccCCH--
Confidence 999998 77888888887765 889999999 44444311110 111233 778999996 4899999999988
Q ss_pred cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCE-EecCCCCCeeEEE
Q 010008 322 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK-LVSGGSDNHLVLV 400 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~-v~~~gt~~~~~~v 400 (520)
++.+.+++..-|....+ ...++..++++.. +..++..+++...++++.+.|.+.|+. +... ..+++++
T Consensus 229 ----~~i~~l~~vr~p~~v~~---~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS--~aNFvlv 297 (356)
T COG0079 229 ----ELIAALNKVRPPFNVSS---PALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFPS--QANFVLV 297 (356)
T ss_pred ----HHHHHHHHhcCCCCCCH---HHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCC--CCcEEEE
Confidence 78888888766653322 2222222233321 234778888999999999999998755 5443 3567788
Q ss_pred EecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.. +- ...+.+.|.+.||.++...-+ +..++++||++. +++|.+++.+++.++++
T Consensus 298 ~~~~-~~-~~~l~~~L~~~giivR~~~~~----~~~~~~lRitvg-------t~een~~ll~AL~~~~~ 353 (356)
T COG0079 298 RVPD-AE-AAALAEALLKKGILVRDCSSV----GLLPGYLRITVG-------TPEENDRLLAALREVLK 353 (356)
T ss_pred ECCC-cc-HHHHHHHHHHCCEEEEeCCCC----CCCCCeEEEEeC-------CHHHHHHHHHHHHHHHh
Confidence 7754 22 457889999999999864211 234679999864 36888999999988775
No 114
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=5.2e-22 Score=206.43 Aligned_cols=320 Identities=18% Similarity=0.178 Sum_probs=218.9
Q ss_pred cceEecCCCC--ChHHHHHHHhhhhhcc--CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCCh
Q 010008 95 SLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 168 (520)
Q Consensus 95 ~i~Liasen~--~~~~V~ea~~s~l~~~--y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sG 168 (520)
.|+|..++|+ +|+.+++++...+... ...+||.. | ...+++...+++.+.+|. +++ +|.+++|
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~----g---~~~lr~aia~~~~~~~~~~~~~~----~I~it~G 96 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDR----D---AVALRADLAAYLTAQTGVGLTVE----NVWAANG 96 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCC----c---hHHHHHHHHHHhhhhccCCCChh----hEEECCC
Confidence 4788888875 6888999998776431 12244421 1 245555555677776665 454 6778999
Q ss_pred H-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 010008 169 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 169 s-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi 247 (520)
+ +++..++.++++|||.|++++|.|.++.. .....|. +++.++.+ +++.+|+++++++++..++|+|+
T Consensus 97 ~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~ 165 (368)
T PRK03317 97 SNEILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVF 165 (368)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEE
Confidence 8 89999999999999999999998765421 2223343 56666554 35789999999998765899999
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----ccc-EEEeccCccc--CCCCceEEEee
Q 010008 248 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFK 318 (520)
Q Consensus 248 ~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aD-iv~~S~hK~l--~GprgG~I~~~ 318 (520)
++.|+||+ ..+.+++.++++.++++||+|++|. ++...+. +..+. +.+ +++.|++|.+ +|.|.|+++++
T Consensus 166 l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 166 LTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC
Confidence 98999987 7899999999999999999999964 4432221 11111 223 6778999987 58899999998
Q ss_pred CCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeE
Q 010008 319 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 398 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~ 398 (520)
+ ++.+.+.....+. +.+.. ..++...+|+.. ..+.+..+++.++++.+.+.|.+.|+.+..+. .+++.
T Consensus 244 ~------~~~~~l~~~~~~~--~~s~~-~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~ 311 (368)
T PRK03317 244 P------AVVDALRLVRLPY--HLSAV-TQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPSD-ANFVL 311 (368)
T ss_pred H------HHHHHHHhcCCCC--CCCHH-HHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCCC-CcEEE
Confidence 7 6777665433222 22222 232333345432 23455567778888889999988888765432 23333
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
|.++. +..++.+.|.++||.+.. +. .++++||++. +.++++++.+.+.+++.
T Consensus 312 ~~~~~----~~~~~~~~l~~~Gv~v~~----~~----~~~~iRi~~~-------~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 312 FGRFA----DRHAVWQGLLDRGVLIRD----VG----IPGWLRVTIG-------TPEENDAFLAALAEVLA 363 (368)
T ss_pred EeccC----CHHHHHHHHHHCCEEEEe----CC----CCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence 33432 457788888899999953 11 2568999854 36889999999988765
No 115
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=4.2e-22 Score=206.97 Aligned_cols=319 Identities=18% Similarity=0.163 Sum_probs=216.8
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
.+.|+|..++|+ +++.+++++...+.. + ..||.. . ..+++ +.+++++|++++ +|.+++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-GFELK----AALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-HHHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 356888877765 578899988876542 2 234431 1 13344 567778899875 56678998
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+++..++.+++++||+|++.+|.|..+.. .....|. +++.++.+ ++.+|++++++.+++ ++|+|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~--~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGA--KPVEVPAK--DYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCC--eEEEeccc--CCCCCHHHHHHHhCC-CCcEEEEe
Confidence 77778888899999999999987643210 1223454 55565553 578999999999976 89999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC----c-ccEEEeccCccc--CCCCceEEEee
Q 010008 250 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK----Y-CDVVTTTTHKSL--RGPRGGMIFFK 318 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~----~-aDiv~~S~hK~l--~GprgG~I~~~ 318 (520)
.++||+ ..+.+++.++++.+ |+++++|++|. .+...+....++. . ..+++.|++|++ +|+|.||++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 899987 78999999999875 99999999854 3333221111111 1 237788999985 68899999998
Q ss_pred CCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee
Q 010008 319 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 397 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~ 397 (520)
+ ++.+.+.....+. +.+...+.++ ..+++ ... .++..+...++++.+.+.|.+.|+.+..+ ...+
T Consensus 241 ~------~~~~~l~~~~~~~--~~~~~~~~~a-~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~ 306 (367)
T PRK02731 241 P------EIIDALNRVRQPF--NVNSLALAAA-VAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEYIPS--VGNF 306 (367)
T ss_pred H------HHHHHHHHccCCC--CCCHHHHHHH-HHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CceE
Confidence 7 6766665433221 2222222222 22232 223 35666777788888999998888876543 3567
Q ss_pred EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+|+++. .+.+..++.+.|.+.||.+... ... ..+++|||++. +.+|++++.+.|+++++
T Consensus 307 ~~i~~~-~~~~~~~~~~~L~~~gI~v~~~----~~~-~~~~~iRis~~-------~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 307 ILVDFD-DGKDAAEAYQALLKRGVIVRPV----AGY-GLPNALRITIG-------TEEENRRFLAALKEFLA 365 (367)
T ss_pred EEEECC-CCCCHHHHHHHHHHCCEEEEeC----CCC-CCCCeEEEecC-------CHHHHHHHHHHHHHHHh
Confidence 787773 3457788888888999999543 221 12578999964 36899999999988764
No 116
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=1.8e-21 Score=204.97 Aligned_cols=337 Identities=14% Similarity=0.064 Sum_probs=207.7
Q ss_pred ccceEecCC-C----CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHc--CCCCCCCceeeecC
Q 010008 94 KSLELIASE-N----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPL 166 (520)
Q Consensus 94 ~~i~Liase-n----~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lf--g~~~~~~~~~V~~~ 166 (520)
+.++|..++ + .+++.+.+++.+.+... .+|+. ..|. ..+.+...+++.... +++++ +|.++
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~---~~G~---~~lr~~ia~~~~~~~~~~~~~~----~i~~t 101 (404)
T PRK09265 34 KILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSD---SKGL---FSARKAIMQYYQQKGIPDVDVD----DIYIG 101 (404)
T ss_pred CeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCC---CCCc---HHHHHHHHHHHhccCCCCCCcc----cEEEe
Confidence 568887643 2 26788988887765432 24443 1222 234333333333222 56665 56678
Q ss_pred ChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCc
Q 010008 167 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 244 (520)
Q Consensus 167 sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pk 244 (520)
+|+ +++..++.++++|||+|++++|.|..... .+...|. +++.++++.+ ++.+|++++++.++. +++
T Consensus 102 ~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~ 170 (404)
T PRK09265 102 NGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RTK 170 (404)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cce
Confidence 888 78888999999999999999998764321 2223344 5555555533 467999999999876 899
Q ss_pred EEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----ccc-EEEeccCccc--CCCCc
Q 010008 245 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRG 312 (520)
Q Consensus 245 lIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aD-iv~~S~hK~l--~Gprg 312 (520)
+|++++|+||+ .++ +++|.++|+++|+++++|+++ .++.+.+....++. ... +++.|++|++ +|.|.
T Consensus 171 ~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 249 (404)
T PRK09265 171 AIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRV 249 (404)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccce
Confidence 99988899987 567 888999999999999999984 45544332111211 112 5678999986 78999
Q ss_pred eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH---HHHHHHHHHHHHHHHHHC-CCEE
Q 010008 313 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYKL 388 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~---~~~i~~na~~l~~~L~~~-G~~v 388 (520)
||++...+.....++.+.+..... ...+.+...+. +...+|.. ...++++ .+++.++++.+.+.|++. |+.+
T Consensus 250 G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~-~~~~~l~~--~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 325 (404)
T PRK09265 250 GWMVLSGPKKHAKGYIEGLDMLAS-MRLCANVPAQH-AIQTALGG--YQSINELILPGGRLYEQRDRAWELLNAIPGVSC 325 (404)
T ss_pred EEEEEeCchHHHHHHHHHHHHHhc-cccCCCcHHHH-HHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999974321000013333321111 11122222233 33334431 1122222 246677788888888774 7765
Q ss_pred ecCCCCCeeEEEEecCCC---C-CHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHH
Q 010008 389 VSGGSDNHLVLVDLRPMG---I-DGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 389 ~~~gt~~~~~~vd~~~~g---~-~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~ 463 (520)
..+ ..+.++|+++.... . +.+.+.+.|.+.||.+ .||.. +...++++|++.. .+++++++..+.
T Consensus 326 ~~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v----~pg~~F~~~~~~~~Ri~~~------~~~e~l~~~l~r 394 (404)
T PRK09265 326 VKP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLL----VQGTGFNWPEPDHFRIVTL------PRVDDLEEAIGR 394 (404)
T ss_pred cCC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCEEE----ECchhhCCCCCCeEEEEeC------CCHHHHHHHHHH
Confidence 544 23566777775321 1 2355788899999999 45543 2223578999863 347889988888
Q ss_pred HHHHHH
Q 010008 464 IHEGVE 469 (520)
Q Consensus 464 i~~~l~ 469 (520)
|.++++
T Consensus 395 l~~~l~ 400 (404)
T PRK09265 395 IGRFLS 400 (404)
T ss_pred HHHHHH
Confidence 887775
No 117
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=1.3e-21 Score=204.57 Aligned_cols=333 Identities=19% Similarity=0.181 Sum_probs=214.7
Q ss_pred ccceEecCC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 010008 94 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 170 (520)
Q Consensus 94 ~~i~Liase--n~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~ 170 (520)
+.|+|..++ .+ .++.+++++...+. +|...+.+-++..|. ..+.+..++++++++|.+. .|.++||++
T Consensus 34 ~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~---~~l~~~l~~~l~~~~g~~~-----~i~~~sG~~ 104 (385)
T TIGR01825 34 EVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGT---LRLHEELEEKLAKFKKTEA-----ALVFQSGFN 104 (385)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCC---cHHHHHHHHHHHHHhCCCc-----EEEECcHHH
Confidence 557887654 34 68889898877654 332222222223343 2333445578889999753 466799999
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcEEE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 247 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~---~pklIi 247 (520)
++..++.++++|||.|++.++.|+++.. .+...|. ++..+ ..+|++++++.+++. ++++|+
T Consensus 105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~v~ 168 (385)
T TIGR01825 105 TNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKLIV 168 (385)
T ss_pred HHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeEEE
Confidence 9999999999999999998887765421 1223333 33232 147888888877642 578888
Q ss_pred EcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc-cc---cCCCC-CcccEEEeccCcccCCCCceEEEeeCC
Q 010008 248 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV---VADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 320 (520)
Q Consensus 248 ~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~~---~~~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~ 320 (520)
++...+++ ..|+++|.++|+++|+++|+|++|..|.... +. ....+ ...|+++.|+||++ |++|||++.++
T Consensus 169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~- 246 (385)
T TIGR01825 169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK- 246 (385)
T ss_pred EecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH-
Confidence 87655554 7899999999999999999999986664321 10 00112 25689999999998 55789998877
Q ss_pred CcchhhHHHhhcccCCCCCCC-CChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 321 PVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+.+.....+...+ .++...++++..+++.... ..+..+++.++++.+.+.|.+.|+++..+. ..++.
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~ 317 (385)
T TIGR01825 247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGGSE--TPITP 317 (385)
T ss_pred -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCEEE
Confidence 5666654332222222 2334445555566765432 234667778889999999988888876542 23333
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+.+.. ..+...+.+.|.+.||.+.....|.. +.....||++.+.. .+++|++++++.|+++++
T Consensus 318 ~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 318 VVIGD-EKAAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAE----HTKDDLDQALDAYEKVGK 380 (385)
T ss_pred EEECC-HHHHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHHHHH
Confidence 33321 12345666677667999853322211 12346799976543 458999999999998875
No 118
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=1.2e-21 Score=210.77 Aligned_cols=328 Identities=14% Similarity=0.088 Sum_probs=208.4
Q ss_pred ChHHHHHHHhhhhhccC--CCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhC-
Q 010008 105 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y--~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all- 180 (520)
.|..+++++...+.+.- ..+|+ ......++.+...+++.+..|.+.+. -+|.+|+|+ +|+..++.+++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~ 160 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYT------DSAGYPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIG 160 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcC------cccCCHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhcc
Confidence 45678888765554321 11233 22223456666667777777765321 267789998 89999999998
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCC
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYP 254 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p 254 (520)
+|||+|++++|.|.++. ..+...|. +++.++++++ ++.+|++++++.+++. ++|+|++++|+||
T Consensus 161 ~~gD~Vlv~~P~y~~y~--------~~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NP 230 (481)
T PTZ00377 161 DPSDGVMIPIPQYPLYS--------AAITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230 (481)
T ss_pred CCCCEEEECCCCchhHH--------HHHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 79999999999876542 13344555 6677777654 4689999999998752 6898888889999
Q ss_pred C--CCC---HHHHHHHHHHhCCEEEEechhhccccccc--ccCCC------CC--c----ccEEEeccCccc---CCCCc
Q 010008 255 R--DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK--Y----CDVVTTTTHKSL---RGPRG 312 (520)
Q Consensus 255 ~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~--~~~~p------~~--~----aDiv~~S~hK~l---~Gprg 312 (520)
+ .++ +++|.++|+++|++||+|+++ ..+++.+ .+++. +. + .-+++.|++|++ +|+|.
T Consensus 231 TG~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 7 555 788899999999999999984 4555422 11111 11 1 115678999974 69999
Q ss_pred eEEEe---eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHh--cCch---h----HHHHHHHHHHHHHHHHH
Q 010008 313 GMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPE---F----KVYQNKVVSNCRALASR 380 (520)
Q Consensus 313 G~I~~---~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~---~----~~~~~~i~~na~~l~~~ 380 (520)
||+++ ++ ++.+++.+.... ..+.+...+.+ ...+++.. .... + +...+++.++++.+.+.
T Consensus 310 G~~~~~~~p~------~li~~l~~~~~~-~~~~~~~~Q~a-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~ 381 (481)
T PTZ00377 310 GYFELTNIPP------EVREQIYKLASI-NLCSNVVGQLM-TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDE 381 (481)
T ss_pred EEEEEeCCCH------HHHHHHHHHhhe-ecCCChHHHHH-HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 44 666666553322 22333333333 33344310 0111 2 12223356778888899
Q ss_pred HHHC-CCEEecCCCCCeeEEEEecC-CC---------C--CHHHHHHHHhhcCeEEcCCCCCCCC-CC-CCCCEEEEccC
Q 010008 381 LVEL-GYKLVSGGSDNHLVLVDLRP-MG---------I--DGARVEKILDMASITLNKNSVPGDK-SA-LVPGGIRIGSP 445 (520)
Q Consensus 381 L~~~-G~~v~~~gt~~~~~~vd~~~-~g---------~--~~~~~~~~L~~~gI~v~~~~~Pg~~-~~-~~~~giRig~~ 445 (520)
|.+. |+.+..+ ..++++|+++.. .+ + +...+..+|++.||.+ .||.. +. ...+++||+..
T Consensus 382 L~~~~g~~~~~p-~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v----~pG~~F~~~~~~~~~Rls~~ 456 (481)
T PTZ00377 382 LNKIEGVSCQPV-EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVV----VPGSGFGQKPGTYHFRITIL 456 (481)
T ss_pred HhcCCCcEeecC-CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEE----eCCcccCCCCCCCEEEEEEC
Confidence 9874 8887654 234566766541 11 1 1223567888999999 55553 21 13468999864
Q ss_pred CccccCCCHHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+++++++..+.|.+.++.
T Consensus 457 ------~~~e~l~~~l~rl~~~~~~ 475 (481)
T PTZ00377 457 ------PPEEQIEEMVKKIKEFHES 475 (481)
T ss_pred ------CCHHHHHHHHHHHHHHHHH
Confidence 2367888888888887764
No 119
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=206.58 Aligned_cols=335 Identities=15% Similarity=0.067 Sum_probs=217.3
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.++|..+++. +++.+.+++...+.... .+|+. ..| ..++.+.+.+++++.+|.+.+. .+|.+++|+ +
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G---~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~ 104 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL---VNG---TPALRKAIIAKLERRNGLHYAD--NEITVGGGAKQ 104 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCC---CHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHH
Confidence 45788776653 46888898888775321 23332 112 2355555667888888885321 267778987 9
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
|+..++.++++|||+|++++|.|.++.. .+...+. .++.++++.+ ++.+|++++++.+.+ ++++|+++
T Consensus 105 al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~ 173 (402)
T PRK06107 105 AIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLILN 173 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEEE
Confidence 9999999999999999999997765421 1223333 4555555433 467999999999876 88999988
Q ss_pred CCCCCC--CC---CHHHHHHHHHHh-CCEEEEechhhcccccccc-cCCCC---Cc---ccEEEeccCccc--CCCCceE
Q 010008 250 ASAYPR--DF---DYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---KY---CDVVTTTTHKSL--RGPRGGM 314 (520)
Q Consensus 250 ~s~~p~--~~---d~~~i~~ia~~~-g~~li~D~Ah~~gli~~~~-~~~p~---~~---aDiv~~S~hK~l--~GprgG~ 314 (520)
+|+||+ .. ++++|+++|+++ |+++|+|+++. .+.+.+. .++.. ++ --++++|+||++ +|.|.||
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~ 252 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY 252 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceee
Confidence 889887 44 467778889998 99999999843 4443321 11111 11 236778999986 7889999
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 393 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt 393 (520)
+++++ ++.+.+.........+ ++....+++..+|.. .....+...+.+.++++.+.+.|++. |+.+..+ .
T Consensus 253 ~~~~~------~~~~~~~~~~~~~~~~-~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p-~ 323 (402)
T PRK06107 253 AAGPA------DLIAAINKLQSQSSSC-PSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP-D 323 (402)
T ss_pred eecCH------HHHHHHHHHHHhcccC-CChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC-C
Confidence 99987 6666655432211122 233333333334432 12223666777888888899999874 7766543 3
Q ss_pred CCeeEEEEecC-------CCC---CHHH-HHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 394 DNHLVLVDLRP-------MGI---DGAR-VEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 394 ~~~~~~vd~~~-------~g~---~~~~-~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
.+.++|+++.. .+. +..+ +..++++.||.+. ||.... .++++||+.. .+++++++..+
T Consensus 324 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~----pg~~Fg-~~~~iRis~~------~~~e~l~~~l~ 392 (402)
T PRK06107 324 GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVV----QGTAYG-LSPYFRLSIA------TSLETLEEACA 392 (402)
T ss_pred cceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEe----CccccC-CCCeEEEEeC------CCHHHHHHHHH
Confidence 35666777631 121 3434 5567788999994 554311 2578999865 24788888888
Q ss_pred HHHHHHH
Q 010008 463 FIHEGVE 469 (520)
Q Consensus 463 ~i~~~l~ 469 (520)
.|.+++.
T Consensus 393 ~l~~~l~ 399 (402)
T PRK06107 393 RIERAVA 399 (402)
T ss_pred HHHHHHH
Confidence 8877664
No 120
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=8.4e-22 Score=207.98 Aligned_cols=342 Identities=16% Similarity=0.136 Sum_probs=217.1
Q ss_pred hccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--------CCCCC
Q 010008 93 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENK 158 (520)
Q Consensus 93 ~~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg--------~~~~~ 158 (520)
.+.|+|..++. ++++.+.+++...+......+|+. .....++.+...+++.+.++ ++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~------~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~- 105 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPP------TVGSPEAREAVATYWRNSFVHKESLKSTIKKD- 105 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCC------CCCcHHHHHHHHHHHHhhccccccccCCCChh-
Confidence 35678876552 468889999987765422224443 11123555555566666554 4454
Q ss_pred CceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHH
Q 010008 159 WGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEK 236 (520)
Q Consensus 159 ~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~ 236 (520)
+|.+|+|+ +|+..++.++++|||+|++++|.|..+.. .....|. +++.++++++ ++.+|++++++
T Consensus 106 ---~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 106 ---NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGI--EMRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred ---hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCC--EEEEEecCccccCcCCHHHHHH
Confidence 56678887 89999999999999999999998765421 2334454 5556666543 56899999999
Q ss_pred HhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C--cccEEEeccCcc
Q 010008 237 TAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKS 306 (520)
Q Consensus 237 ~i~~~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~--~aDiv~~S~hK~ 306 (520)
.++. ++|+|++++|+||+ .+ ++++|.++|+++|++||+|+++ ..+++.+....++ . ..-+++.|++|+
T Consensus 173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAKN 250 (412)
T ss_pred Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchhh
Confidence 8877 89999999999987 33 4778899999999999999994 4665443211111 1 123778999997
Q ss_pred c--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-
Q 010008 307 L--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE- 383 (520)
Q Consensus 307 l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~- 383 (520)
+ +|.|.||+++..+.....++.+.+....... .+.+...+ .+++.++.......+++..+++.++++.+.+.|.+
T Consensus 251 ~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 251 LVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSVVQ-AALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred cCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChHHH-HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5 8899999997321000013544444322211 22323323 23333443211123466677888889999999987
Q ss_pred CCCEEecCCCCCeeEEEEecCC---CC-CHHHHHHH-HhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHH
Q 010008 384 LGYKLVSGGSDNHLVLVDLRPM---GI-DGARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 384 ~G~~v~~~gt~~~~~~vd~~~~---g~-~~~~~~~~-L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
.|+.+..+ ..+.++|+.+... ++ +..++.+. ++++||.+. ||... ..++++||++. ..+++++
T Consensus 329 ~~~~~~~p-~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~----pg~~f-~~~~~iRis~~------~~~e~l~ 396 (412)
T PTZ00433 329 IGLSPTMP-RGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVL----PGEIF-HMPGFTRLTIS------RPVEVLR 396 (412)
T ss_pred CCCcccCC-CeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEe----Ccccc-CCCCeEEEEec------CCHHHHH
Confidence 47765443 2345667776431 22 34455444 457999994 55431 12579999864 2367888
Q ss_pred HHHHHHHHHHHH
Q 010008 459 AIADFIHEGVEI 470 (520)
Q Consensus 459 ~la~~i~~~l~~ 470 (520)
+..+.|.++++.
T Consensus 397 ~al~~l~~~~~~ 408 (412)
T PTZ00433 397 EAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHH
Confidence 888888877764
No 121
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.91 E-value=4.6e-21 Score=201.78 Aligned_cols=342 Identities=18% Similarity=0.137 Sum_probs=212.0
Q ss_pred hhccceEecCCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 010008 92 QFKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 163 (520)
Q Consensus 92 ~~~~i~Liasen------~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V 163 (520)
..+.|+|..++. ++++.+++++...+......+|+. ..| ...+++...+++...++. +++ +|
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g---~~~lr~~ia~~l~~~~~~~~~~~----~i 99 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP---SVG---ALAAREAVAEYLSSDLPGKLTAD----DV 99 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCC---CHHHHHHHHHHHHhhcCCCCCHH----HE
Confidence 346788876653 467899999988776543334432 122 233443333333333333 333 45
Q ss_pred ecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc
Q 010008 164 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF 241 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~ 241 (520)
.+++|+ +|+.+++.+++++||+|++++|.|.... ......|. +++.++++++ ++.+|++++++++++
T Consensus 100 i~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~- 168 (403)
T TIGR01265 100 VLTSGCSQAIEICIEALANPGANILVPRPGFPLYD--------TRAAFSGL--EVRLYDLLPEKDWEIDLDGLEALADE- 168 (403)
T ss_pred EEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH--------HHHHHcCC--EEEEecCCcccCCccCHHHHHHHhCc-
Confidence 567776 9999999999999999999998765331 12233454 5556555433 468999999999877
Q ss_pred CCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----ccc-EEEeccCccc--CC
Q 010008 242 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RG 309 (520)
Q Consensus 242 ~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aD-iv~~S~hK~l--~G 309 (520)
+++++++++|+||+ ..+ +++|.++|+++|+++|+|++ |..+.+.+....++. ... +++.|++|++ +|
T Consensus 169 ~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 247 (403)
T TIGR01265 169 KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEI-YGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPG 247 (403)
T ss_pred CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcc-ccccccCCCCccchhhhccCCcEEEEeecccccCCCc
Confidence 78999999888887 444 88899999999999999998 445554431111221 122 6779999974 88
Q ss_pred CCceEEEeeCCC-cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 310 PRGGMIFFKKDP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 310 prgG~I~~~~~~-~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
.|.||++++++. ....++.+.+...... ..+ ++.....++..++.......+++..+++.++++.+.+.|... |+.
T Consensus 248 lRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (403)
T TIGR01265 248 WRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILG-PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLV 325 (403)
T ss_pred ceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcC-CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 999999985420 0000133333222111 112 233333444445543222234667788888899999999875 776
Q ss_pred EecCCCCCeeEEEEecCCC----CCHHHHHH-HHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 388 LVSGGSDNHLVLVDLRPMG----IDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 388 v~~~gt~~~~~~vd~~~~g----~~~~~~~~-~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
+..+ ..+.++|+++.... .+..++.+ ++++.||.+ .||... ..+++|||+.. ..++.+++..+
T Consensus 326 ~~~p-~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v----~pg~~f-~~~~~iRis~~------~~~~~l~~~l~ 393 (403)
T TIGR01265 326 CPKP-EGAMYLMVKLELELFPEIKDDVDFCEKLVREESVIC----LPGSAF-GLPNWVRITIT------VPESMLEEACS 393 (403)
T ss_pred ecCC-CceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEE----eCcccc-CCCCeEEEEec------CCHHHHHHHHH
Confidence 5433 23567788775321 24555544 468899999 455431 13679999864 23566777777
Q ss_pred HHHHHHH
Q 010008 463 FIHEGVE 469 (520)
Q Consensus 463 ~i~~~l~ 469 (520)
.|.++++
T Consensus 394 ~l~~~~~ 400 (403)
T TIGR01265 394 RIKEFCE 400 (403)
T ss_pred HHHHHHH
Confidence 6666553
No 122
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.90 E-value=2.5e-21 Score=207.71 Aligned_cols=333 Identities=16% Similarity=0.144 Sum_probs=213.8
Q ss_pred CCCCChHHHHHHHhhhhh-ccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH---H
Q 010008 101 SENFTSRAVMEAVGSCLT-NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV---Y 176 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~-~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~---l 176 (520)
....++|.+.+++.+... ..|+ .|... .-.....++....++++++++|++. +.+.+++|+.+.... +
T Consensus 78 ~~~~~~p~i~~~~~~~~~~~~~t-pYq~e---~~sqG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~ 149 (481)
T PRK04366 78 CTMKYNPKINEKVARLPGFAELH-PLQPE---ETVQGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMI 149 (481)
T ss_pred cCCCCCHHHHHHHHhCcchhcCC-CCCCh---hhhhHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHH
Confidence 345688999998876511 1221 12100 0111223444566789999999974 467778888554432 2
Q ss_pred H-hhCCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 177 T-AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 177 ~-all~pGD----~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
. .++++|| +|+++++.|+.+.. .+...|. +++.++++ +++.+|++++++++++ ++++|++++|
T Consensus 150 r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~--~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~P 217 (481)
T PRK04366 150 RAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGF--KVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTNP 217 (481)
T ss_pred HHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeCC
Confidence 2 3467887 99999988765532 2234454 66666665 4688999999999987 8999988887
Q ss_pred CCCC-C-CCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcccCCCC------ceEEEeeCCCc
Q 010008 252 AYPR-D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKDPV 322 (520)
Q Consensus 252 ~~p~-~-~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~Gpr------gG~I~~~~~~~ 322 (520)
+..+ . .|+++|+++|+++|+++++|+||..++.. .. .|-. ++|++++++||||.+|. .|++++++
T Consensus 218 n~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~--- 291 (481)
T PRK04366 218 NTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE--- 291 (481)
T ss_pred CCccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehh---
Confidence 7433 3 47999999999999999999998766432 11 2223 79999999999986554 36888876
Q ss_pred chhhHHHhhccc-------CC-CCC----------CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC
Q 010008 323 LGVELESAINNA-------VF-PGL----------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 384 (520)
Q Consensus 323 ~~~~l~~~i~~~-------~~-p~~----------~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~ 384 (520)
++.+++... .+ ... .++.+...+.+....+..+...++++..++...++++|++.|.+.
T Consensus 292 ---~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 292 ---ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred ---hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 333332100 00 000 011111112222223444444556777888899999999999885
Q ss_pred CCEEecCCCCCeeEEEEe---cCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 385 GYKLVSGGSDNHLVLVDL---RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 385 G~~v~~~gt~~~~~~vd~---~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
+.+..++...+.++++. ...+++..++.+.|.+.||.+.....|. ...+.+|++....+| ++|+++++
T Consensus 369 -~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l~ 439 (481)
T PRK04366 369 -YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAFI 439 (481)
T ss_pred -CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHHH
Confidence 44443222224455553 2234567889999999999875332221 125689999887665 89999999
Q ss_pred HHHHHHHHHH
Q 010008 462 DFIHEGVEIT 471 (520)
Q Consensus 462 ~~i~~~l~~~ 471 (520)
+.+.++.+..
T Consensus 440 ~~l~~i~~~~ 449 (481)
T PRK04366 440 AAMKQIAEEA 449 (481)
T ss_pred HHHHHHHHHH
Confidence 9999887644
No 123
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=4.3e-22 Score=206.37 Aligned_cols=314 Identities=16% Similarity=0.125 Sum_probs=207.1
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeec-CChH-
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGS- 169 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~-~sGs- 169 (520)
+.|+|..++|+ +++.+++++...+.. + .+||.. . ..+++ +.+++++|++++ +|.+ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPEP------D-APELR----EALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------C-HHHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence 55888888774 568888888766542 1 234431 1 13343 667788899875 4555 7887
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+++..++.++++|||+|++++|.|..+. ......|. +++.++.+ +++.+|++++++.++. ++++|+++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~--------~~~~~~g~--~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYE--------ISAKAHGA--KPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHH--------HHHHHcCC--EEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 7788888888999999999998664331 11233454 55565544 4568999999998876 89999988
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCccc--EEEeccCccc--CCCCceEEEeeCCCcc
Q 010008 250 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKKDPVL 323 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aD--iv~~S~hK~l--~GprgG~I~~~~~~~~ 323 (520)
+++||+ ..+.+++.++|+++|+++++|++|. ++..... ...+...| +++.|++|++ +|.|.||+++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~---- 239 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAEYDY-TPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE---- 239 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCccch-HHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence 888887 7899999999999999999999964 3331111 11011122 6778999987 578899999987
Q ss_pred hhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEe
Q 010008 324 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 402 (520)
Q Consensus 324 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~ 402 (520)
++.+.+.....+.. . +....++...+++ ..+ +++..+++.++++.+.+.|. +++..+ .+.++|+++
T Consensus 240 --~~~~~~~~~~~~~~--~-~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~~~~~~--~~~~i~~~~ 306 (361)
T PRK00950 240 --WLIDYYMRAKTPFS--L-TRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---FKVYPS--EANFVLVDV 306 (361)
T ss_pred --HHHHHHHHhcCCCC--C-CHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---eeECCC--cceEEEEEC
Confidence 66666554332221 1 1222222222332 223 35555556666666665553 554432 345677777
Q ss_pred cCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 403 RPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 403 ~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.+.+..++.+.|.++||.+.. |.. +...+++|||++. +.+|++++.+.|++++
T Consensus 307 --~~~~~~~~~~~l~~~gv~v~~----~~~f~~~~~~~lRis~~-------~~~~~~~l~~~L~~il 360 (361)
T PRK00950 307 --TPMTAKEFCEELLKRGVIVRD----CTSFRGLGDYYIRVSIG-------TFEENERFLEILKEIV 360 (361)
T ss_pred --CCCCHHHHHHHHHHCCEEEee----CCccCCCCCCeEEEECC-------CHHHHHHHHHHHHHHh
Confidence 345778888888889999954 322 1223578999964 3689999999998765
No 124
>PLN02483 serine palmitoyltransferase
Probab=99.90 E-value=1.2e-21 Score=210.36 Aligned_cols=320 Identities=18% Similarity=0.179 Sum_probs=204.2
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 184 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ry-y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD 184 (520)
++.|.+++.. |.-+..+.|. |+.....+++| +.+++++|.+. .|..++|+.+|.+++.++++|||
T Consensus 121 ~~~~~~ai~~-----~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~G~~an~~~i~al~~~Gd 186 (489)
T PLN02483 121 TPRVIESLKK-----YSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGMGYATNSTIIPALIGKGG 186 (489)
T ss_pred HHHHHHHHHH-----hCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 4566666543 3333334453 44456666666 67889999754 45668999999999999999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CC-----cEEEEcCCC-
Q 010008 185 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RP-----KLIIAGASA- 252 (520)
Q Consensus 185 ~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~------~p-----klIi~~~s~- 252 (520)
.|++.++.|.+... .+...|. +++.++.+ |++++++.+++. ++ |++++..+.
T Consensus 187 ~Vi~d~~~h~s~~~--------~~~~~Ga--~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~ 250 (489)
T PLN02483 187 LIISDSLNHNSIVN--------GARGSGA--TIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIY 250 (489)
T ss_pred EEEEcchhhHHHHH--------HHHHcCC--eEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCC
Confidence 99999988766432 2344565 55555432 456665554320 22 545554332
Q ss_pred --CCCCCCHHHHHHHHHHhCCEEEEechhhcccccc-c--ccC-CCC--CcccEEEeccCcccCCCCceEEEeeCCCcch
Q 010008 253 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 253 --~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~~~-~p~--~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~ 324 (520)
.+...++++|.++|+++|++|++|++|..|.... + ... ..+ ...||+++|+||++ |+.||++++++
T Consensus 251 s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~-g~~GG~i~~~~----- 324 (489)
T PLN02483 251 SMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF-GSCGGYIAGSK----- 324 (489)
T ss_pred CCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc-ccCceEEEcCH-----
Confidence 2337899999999999999999999997664321 1 100 111 25789999999998 56789999887
Q ss_pred hhHHHhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCc----hhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 325 VELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSP----EFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~----~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+.+........ .++.+...+++...+|+.+... ...+..+++.++++++.+.|++.|+.+..+ .++..++
T Consensus 325 -~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~-~~sp~~~ 402 (489)
T PLN02483 325 -ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGD-NDSPVMP 402 (489)
T ss_pred -HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCC-CCCCEEE
Confidence 67777664322211 2222333344444566644321 235567889999999999999989877643 2233333
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+-+.. ..+...+.+.|.+.||.+.....|.. +...+.+||+.++.. +++|++++++.|++++..
T Consensus 403 l~l~~-~~~~~~~~~~Ll~~GI~v~~~~fp~~--p~~~~~vRi~isa~~----t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 403 IMLYN-PAKIPAFSRECLKQNVAVVVVGFPAT--PLLLARARICISASH----SREDLIKALEVISEVGDL 466 (489)
T ss_pred EEECC-HHHHHHHHHHHHHCCcEEeeeCCCCC--CCCCceEEEEeCCCC----CHHHHHHHHHHHHHHHHH
Confidence 32211 11234566667778999964322322 333578999877543 489999999999988753
No 125
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=8.4e-22 Score=205.13 Aligned_cols=318 Identities=18% Similarity=0.163 Sum_probs=213.2
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +++.+.+++....... ..||.. .| +.+ ++.+++++|++++ +|.+++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~~--~~Y~~~---~g----~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAELL--RLYPDP---QG----RAL----REAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC---cH----HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 45888888774 6788999887643321 234431 11 233 3567778898875 56778998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|++.+|.|..+.. .....|. +++.++++ +++.+|++++++.+++ ++|+|++++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGA--RVERVTVT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 8888889999999999999988754421 2234454 56666666 3578999999999877 899999999
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCC---C--c-ccEEEeccCccc--CCCCceEEEee
Q 010008 251 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFK 318 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~---~--~-aDiv~~S~hK~l--~GprgG~I~~~ 318 (520)
++||+ .++.+++.++++. .++++++|+++ ..+...+..++.+ . + .-|++.|++|++ +|.|.||+++.
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 99987 7788777777764 47899999994 4444333222222 1 1 127789999986 89999998875
Q ss_pred CCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeE
Q 010008 319 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 398 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~ 398 (520)
++ ++.+.+.+...+ .+.+...+.++ ..++.. ...+++..+.+.++++.+.+.|++.|+.+..++ ..++
T Consensus 247 ~~-----~l~~~~~~~~~~--~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~~--g~fl 314 (371)
T PRK05166 247 DP-----ELVGLLDRVRTP--FNVNGAAQAAA-LAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAPSR--ANFL 314 (371)
T ss_pred CH-----HHHHHHHHhccC--CCCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCCc--CCEE
Confidence 43 666665443222 22222222222 223331 123466677888888999999998888764432 4556
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
|+++. .+..++.+.|.++||.+. ||.. ...+++|||++. +.++++++.+.|++++
T Consensus 315 ~~~~~---~~~~~l~~~l~~~gi~v~----p~~~-~~~~~~iRi~~~-------~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 315 FFDAR---RPASAVAEALLRQGVIVK----PWKQ-PGFETFIRVSIG-------SPEENDHFVAALDKVL 369 (371)
T ss_pred EEeCC---CCHHHHHHHHHHCCeEEe----cCCC-CCCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 77753 245677788878899995 4432 123679999865 2578899988887654
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.90 E-value=7.4e-22 Score=203.09 Aligned_cols=301 Identities=15% Similarity=0.106 Sum_probs=187.9
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhhCCCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHD 184 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD 184 (520)
.|.+.++....+ ++|. | ..+..+++| +.+++++|++++ ++.+++| ++||..++.++++|||
T Consensus 35 ~~~~~~~~~~~~-~~~~-g--------~~~~~~~Le----~~lA~~~g~~~e----~ilv~~gg~~a~~~~~~al~~~gd 96 (346)
T TIGR03576 35 GFKIDEEDLELL-ETYV-G--------PAIFEEKVQ----ELGREHLGGPEE----KILVFNRTSSAILATILALEPPGR 96 (346)
T ss_pred ChhHHHHHHHHH-HHhc-C--------CHHHHHHHH----HHHHHHcCCCcc----eEEEECCHHHHHHHHHHHhCCCCC
Confidence 466777665544 3331 2 123344555 788999999765 3344555 4999999999999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-C---CCHH
Q 010008 185 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-D---FDYP 260 (520)
Q Consensus 185 ~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~---~d~~ 260 (520)
+|+++.++...|.+.. ..+.+.|. +++.+ .|+++++. .+ ++++|+++.++..+ . .|++
T Consensus 97 ~Vli~~~d~p~~~s~~-----~~~~l~ga--~~~~~--------~~l~~l~~--~~-~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIP-----RSCKLAGA--EYFES--------DELSELKK--ID-GTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEEECCCCCCCchhHH-----HHHHHcCC--EEecc--------CCHHHHhh--Cc-CceEEEEECCCCCCcccCHHHHH
Confidence 9998655444443221 12344554 32221 24555432 23 68888876544333 3 5889
Q ss_pred HHHHHHHHhCCEEEEechhhcccccc-cccCCCCC-cccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCC
Q 010008 261 RMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 338 (520)
Q Consensus 261 ~i~~ia~~~g~~li~D~Ah~~gli~~-~~~~~p~~-~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~ 338 (520)
+|.++|+++|++|++|+||..|.... +. ..... ++|++++|+||+++|+|+|++++++ ++.+.+.....+.
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~ 231 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQF 231 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCc
Confidence 99999999999999999998765321 11 11111 4789999999999999999999998 6777776554443
Q ss_pred CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhh
Q 010008 339 LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM 418 (520)
Q Consensus 339 ~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~ 418 (520)
..+.+.. ..++...+|+... .+...+.+.++++.+.+.+.+ +.+... ...++++++...+ +.+.+.++|++
T Consensus 232 ~~s~~~~-~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~~-~~~~~~~ll~~ 302 (346)
T TIGR03576 232 GLEAQAP-LLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEEK-LIEIGLDLLRN 302 (346)
T ss_pred ccCccHH-HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCCC-HHHHHHHHHHh
Confidence 3333333 4444445676432 244455666666666666653 444332 2346787875311 23678889999
Q ss_pred cCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHH---HHHHHHHHHHHHH
Q 010008 419 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK---EFVAIADFIHEGV 468 (520)
Q Consensus 419 ~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~---d~~~la~~i~~~l 468 (520)
.||.+. |+...+..++++||+... .++ +++.+.+.|++.+
T Consensus 303 ~gV~v~----~~~~f~~~~~~vRis~~~------~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 303 YGIITI----TAVGMPGASKTLRFDLAA------KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCEEEe----CCcccCCCCCeEEEEEec------ChHHhcCHHHHHHHHHhcc
Confidence 999995 443211236799997531 123 6999988887643
No 127
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=203.87 Aligned_cols=321 Identities=14% Similarity=0.110 Sum_probs=209.5
Q ss_pred cceEecCCCC--ChHHHHHHHhhhhhccC-CCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC----CCCCCCceeeecCC
Q 010008 95 SLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLS 167 (520)
Q Consensus 95 ~i~Liasen~--~~~~V~ea~~s~l~~~y-~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg----~~~~~~~~~V~~~s 167 (520)
.+.|..+||+ +|+.+++++.+.+.+.+ ..+||. .| ..++++...+++.+.++ ++++ +|.+++
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G---~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it~ 98 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GG---HEALKQAIAEYVNESAAGSSQITPA----NISVGN 98 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cc---hHHHHHHHHHHhCccccccCCCCHH----HEEEcC
Confidence 5778888874 78999999987666532 234542 12 23455444445544432 5554 677899
Q ss_pred hH-HHHHHHHHhhCCCCC-EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cC
Q 010008 168 GS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FR 242 (520)
Q Consensus 168 Gs-~A~~~~l~all~pGD-~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~ 242 (520)
|+ +++..++.+++.+|| +|++++|.|.++. ..+...|. +++.++++.+++.+|+++++++++. .+
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYG--------ILAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence 98 888888888888886 8999999875442 12344565 6677777655689999999998874 48
Q ss_pred CcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEechhhcccccccccCCCCC-cc-cEEEeccCccc--CCCCceEE
Q 010008 243 PKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMI 315 (520)
Q Consensus 243 pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~li~D~Ah~~gli~~~~~~~p~~-~a-Div~~S~hK~l--~GprgG~I 315 (520)
+|+|+++.|+||+ .++.+++.++++- +|++||+|+++ ..+..... ...+. +. -|++.|++|++ +|.|.||+
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y-~~~~~~~~-~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAY-FEFSQTTL-VGELAQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccc-cccCccch-HHHHhcCCCEEEEEecchhccCcccceeee
Confidence 9999999999997 6676666665532 48999999985 33321110 01111 21 27789999986 89999999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 394 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~ 394 (520)
++++ ++.+.+.....+. +.+...+.++ ..+++.. ..+.+..+++.++++.+.+.|.+. |+.+... .
T Consensus 247 v~~~------~l~~~l~~~~~~~--~~~~~~q~a~-~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~--~ 313 (374)
T PRK02610 247 IGHP------ELIAVLEKVRLPY--NLPSFSQLAA-QLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWPS--A 313 (374)
T ss_pred ecCH------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCCC--c
Confidence 9977 6777665543222 2233333332 2344321 233444455556677788888764 6665432 3
Q ss_pred CeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
..++|+++. .+.+..++.+.|.+.||.+.. .++++||++.. .+++++..+.|.+++.
T Consensus 314 g~f~~~~l~-~~~~~~~~~~~l~~~gi~v~~----------~~~~lRls~~~-------~~~~~~~l~~l~~~l~ 370 (374)
T PRK02610 314 ANFLYLRLS-QDAALAALHQALKAQGTLVRH----------TGGGLRITIGT-------PEENQRTLERLQAALT 370 (374)
T ss_pred ceEEEEeCC-CCCCHHHHHHHHHHCCEEEEe----------CCCeEEEeCCC-------HHHHHHHHHHHHHHHh
Confidence 456787774 345677788889999999842 14689998641 4678888888877664
No 128
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=2.4e-21 Score=202.85 Aligned_cols=329 Identities=12% Similarity=0.089 Sum_probs=211.2
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 184 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~r-yy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD 184 (520)
+|.++++....+ .+|.-|+.+.| ||+-....+++| +++++++|.+. .+..+||+.|+..++.++++|||
T Consensus 14 ~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~~i~~l~~~GD 83 (392)
T PLN03227 14 SPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSSTVAAFAKRGD 83 (392)
T ss_pred CHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHHHhCCCCC
Confidence 678888887766 35666666655 565555666777 68899999975 36679999999999999999999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh----------cCCcEEEEcCCCCC
Q 010008 185 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----------FRPKLIIAGASAYP 254 (520)
Q Consensus 185 ~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~----------~~pklIi~~~s~~p 254 (520)
+|++.++.|++.+. .+.+.+. +++.++.+ ..-|++.+.+.+.. .++++|++..+.++
T Consensus 84 ~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~~---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~ 150 (392)
T PLN03227 84 LLVVDRGVNEALLV--------GVSLSRA--NVRWFRHN---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKN 150 (392)
T ss_pred EEEEeccccHHHHH--------HHHHcCC--eEEEeCCC---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCC
Confidence 99999987765432 1222332 44444332 11233443333321 15788888866555
Q ss_pred C--CCCHHHHHHHHHHhCCEEEEechhhcccccc---ccc----CCCCCcccEEEeccCcccCCCCceEEEeeCCCcchh
Q 010008 255 R--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 325 (520)
Q Consensus 255 ~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~----~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~ 325 (520)
+ ..|+++|+++|+++|+++++|++|..|.... +.. ..|..++|++++|++|.+ ||.||++++++
T Consensus 151 ~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~gg~v~~~~------ 223 (392)
T PLN03227 151 TGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVGGMTVGSE------ 223 (392)
T ss_pred CCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccCcEEecCH------
Confidence 3 7899999999999999999999998664421 111 122346899999999975 79999998887
Q ss_pred hHHHhhcccCCCCCCCCC--hHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC---------CCC
Q 010008 326 ELESAINNAVFPGLQGGP--HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---------GSD 394 (520)
Q Consensus 326 ~l~~~i~~~~~p~~~g~p--~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~---------gt~ 394 (520)
++.+.+.........++. .....++++ ++..... ..+..+++.++.++|.+.|++.+++.+.+ .+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~p~~~~aa~~-al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~ 300 (392)
T PLN03227 224 EVVDHQRLSGSGYCFSASAPPFLAKADAT-ATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPI 300 (392)
T ss_pred HHHHHHHHhCcCccccCCCCHHHHHHHHH-HHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCC
Confidence 555544322222233432 223344443 4544332 24567888999999999998765543211 123
Q ss_pred CeeEEEEecCCCCC--------HHHHHHHHhhcCeEEcCCC-CCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGID--------GARVEKILDMASITLNKNS-VPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 395 ~~~~~vd~~~~g~~--------~~~~~~~L~~~gI~v~~~~-~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
++++-+.+.+...+ ...+.+.|.+.||.+.... .|... ....+..||+.++ .+.+++|++++++.|
T Consensus 301 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~----~~~t~eei~~~~~~l 376 (392)
T PLN03227 301 SPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN----ASHTREDIDKLLTVL 376 (392)
T ss_pred CCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec----CCCCHHHHHHHHHHH
Confidence 45555555321111 1367778888999885311 11100 1112467999766 456799999999999
Q ss_pred HHHHHHH
Q 010008 465 HEGVEIT 471 (520)
Q Consensus 465 ~~~l~~~ 471 (520)
+++++..
T Consensus 377 ~~~~~~~ 383 (392)
T PLN03227 377 GEAVEAI 383 (392)
T ss_pred HHHHHHH
Confidence 9998654
No 129
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=1.3e-21 Score=202.54 Aligned_cols=317 Identities=14% Similarity=0.110 Sum_probs=205.4
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.++|..+||+ +|+.+++++...+.. . ..||.. ..+.+ ++.++++++++++ +|.+++|+ +
T Consensus 21 ~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~~-------~~~~l----r~~ia~~~~~~~~----~i~it~Ga~~ 83 (356)
T PRK08056 21 QLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPDV-------EYRHL----HQALARHHQVPAS----WILAGNGETE 83 (356)
T ss_pred hEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcCc-------cHHHH----HHHHHHHhCcChh----hEEECCCHHH
Confidence 45889888885 689999999876542 1 234421 12333 3567778899886 56678888 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
++..++.++ .||| +++++|.+..+. ..+...|. +++.++++++ ++.+| +++++.+.+ ++|+|+++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~~-~~k~v~l~ 149 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYR--------RALQQVGC--EIRRYSLREADGWQLT-DAILEALTP-DLDCLFLC 149 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHH--------HHHHHcCC--eEEEEecccccCCCcc-HHHHHhccC-CCCEEEEe
Confidence 888888776 7887 566677543221 12344555 6666666543 34566 455555665 89999999
Q ss_pred CCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC--cccEEEeccCccc--CCCCceEEEeeC
Q 010008 250 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 250 ~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~--~aDiv~~S~hK~l--~GprgG~I~~~~ 319 (520)
+|+||+ ..+ +++|.++|+++|+++|+|++ |.++...+. ....+. ...+++.|+||++ +|.|.||+++++
T Consensus 150 ~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 150 TPNNPTGLLPERQLLQAIAERCKSLNIALILDEA-FIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecc-hhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 999997 566 77888999999999999998 445443221 111122 2458889999986 788999999864
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCee
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 397 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~ 397 (520)
+ ++.+.+.....+. +.+.....+...++ ....+ ++..+++.++++.+.+.|++. |+.+..+ .+.+
T Consensus 229 ~-----~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~~~ 295 (356)
T PRK08056 229 D-----AAVARMRRQQMPW---SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWPG--RANY 295 (356)
T ss_pred H-----HHHHHHHHhCCCC---chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--CCcE
Confidence 2 4555554432221 11111211111122 22333 555677888899999999774 7776543 3466
Q ss_pred EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+|+++.. +..++.+.|.+.||.+.. |+. ....+++|||++. ++++++.+.+.|+++++
T Consensus 296 ~~~~~~~---~~~~~~~~l~~~gI~v~~----~~~f~~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 296 LFLRCER---PDIDLQRALLTQRILIRS----CANYPGLDSRYYRVAIR-------SAAENERLLAALRNVLT 354 (356)
T ss_pred EEEEcCC---ChHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEEc-------CHHHHHHHHHHHHHHHc
Confidence 7777642 356677778789999954 332 1223568999864 36899999999987654
No 130
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=6.4e-22 Score=204.50 Aligned_cols=313 Identities=17% Similarity=0.135 Sum_probs=213.5
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..+++. +++.+++++...+.. + ..||. ...+.++ +.+++++|++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 45788877763 567899999877642 1 23432 1133444 667788898875 56678998 6
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++++|||+|+++.|.+..+. ......|. +++.+++++ ++.+|++++++.+++ ++|+++++.
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYP--------ILVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHH--------HHHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 777788888999999999988654321 11233454 666777763 478999999999977 899999988
Q ss_pred CCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC----ccc-EEEeccCccc--CCCCceEEEeeC
Q 010008 251 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 319 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~----~aD-iv~~S~hK~l--~GprgG~I~~~~ 319 (520)
++||+ ..+.+++.++|+. +|+++++|+++ .++...+..+.++. ..+ +++.|++|.+ +|.|.||+++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAY-VEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechH-HHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 89887 7899999999987 59999999995 34444332222221 123 6778999987 588999999987
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+.+.+...+ .+.+...+.++. .++.. ...+.+..+++.++++.+.+.|.+.|+.+..+ ...++|
T Consensus 233 ------~~~~~~~~~~~~--~~~s~~~q~~a~-~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~--~g~~i~ 299 (352)
T PRK03321 233 ------EVIAALRKVAVP--FSVNSLAQAAAI-ASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPPS--QANFVW 299 (352)
T ss_pred ------HHHHHHHHhcCC--CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC--CCCEEE
Confidence 677776654322 222223233332 24432 23445556667777788889998888765433 245677
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+++. .+..++.+.|.++||.+.. . ...+|||++. +.++++++.+++++++
T Consensus 300 i~l~---~~~~~~~~~l~~~gI~v~~----~-----~~~~iRi~~~-------~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 300 LPLG---ERTADFAAAAAEAGVVVRP----F-----AGEGVRVTIG-------APEENDAFLRAARAWR 349 (352)
T ss_pred EeCC---CCHHHHHHHHHHCCEEEEc----c-----CCCcEEEeeC-------CHHHHHHHHHHHHHHh
Confidence 7763 2456788888999999942 2 2357999863 3799999999998764
No 131
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.90 E-value=7.3e-22 Score=211.22 Aligned_cols=342 Identities=15% Similarity=0.162 Sum_probs=210.4
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs 169 (520)
+.|+|..++. .+++.|.++......+. ||. ..|. ....|.++..++.+.++.. +.. ..+|.+|+|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~----Y~~---~~g~--~~lreaia~~~~~~~~~~~~~~~~-~~~I~vT~Ga 170 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGDN----YPV---PDRM--LKHTEKIVKDYLRQEMCGGRPPKG-EFDLFAVEGG 170 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcCC----CCC---CCCC--HHHHHHHHHHHHHhhccCCCCCCC-cCeEEEeCCH
Confidence 5578877763 35777888655443322 432 1122 2334445544555544332 210 0267778888
Q ss_pred -HHHHHHHHh-----hCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcC
Q 010008 170 -PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFR 242 (520)
Q Consensus 170 -~A~~~~l~a-----ll~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~ 242 (520)
+|+..++.+ +++|||+|++++|.|..+.. .+.+.|...++++++.+++ ++.+|.+++++++++ +
T Consensus 171 ~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~ 241 (527)
T PRK09275 171 TAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-S 241 (527)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-C
Confidence 888888876 68999999999997754421 2334454557777776544 478999999998887 8
Q ss_pred CcEEEEcCCCCCC--CCC---HHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC---cccEEEeccCccc--CCC
Q 010008 243 PKLIIAGASAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGP 310 (520)
Q Consensus 243 pklIi~~~s~~p~--~~d---~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~---~aDiv~~S~hK~l--~Gp 310 (520)
+|+|++++|+||+ ..+ +++|.++|++ ++++||+|+++ ..+.. .+.+.+. .--|++.|++|++ +||
T Consensus 242 tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY-~~f~~--~~~s~~~~~~~~~I~v~SfSK~f~mtG~ 318 (527)
T PRK09275 242 IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVY-GTFVD--DFRSLFAVLPYNTILVYSFSKYFGATGW 318 (527)
T ss_pred CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCC-hhhcc--cccCHHHhCCCCEEEEeehhhhccCcHh
Confidence 9999999999997 555 6778888865 49999999984 34432 1122111 2238889999986 899
Q ss_pred CceEEEeeCCCcchhhHHHhh--------------------------------cccCCCCCCCCChHHHHH-H---HHHH
Q 010008 311 RGGMIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIG-G---LAVC 354 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i--------------------------------~~~~~p~~~g~p~~~~ia-a---la~a 354 (520)
|.||++++++.. ..++.+.+ .........|.+...+++ + +..+
T Consensus 319 RlG~i~~~~~~v-~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~al 397 (527)
T PRK09275 319 RLGVIALHEDNV-FDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFAL 397 (527)
T ss_pred HHhhhhcCchhH-HHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence 999999987410 00011111 010011112333334443 3 2222
Q ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec-CCCCCeeEEEEecCCC---------------CCH-HHHHHHHh
Q 010008 355 LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVEKILD 417 (520)
Q Consensus 355 l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~-~gt~~~~~~vd~~~~g---------------~~~-~~~~~~L~ 417 (520)
++. .....++..+.+.++++.+.+.| |+.+.. +....+++++|+...+ .+. +.+.++++
T Consensus 398 l~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~ 473 (527)
T PRK09275 398 LDE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAE 473 (527)
T ss_pred HhC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHh
Confidence 332 11223566777777778777776 443321 2223577788875321 133 34667888
Q ss_pred hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 418 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 418 ~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+.||.+ +||......++++||+... .+++++.++.+.|.+++...
T Consensus 474 e~gV~v----~PG~~Fg~~~~~vRis~a~-----~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 474 ETGVVL----LPGGGFGGPEWSVRVSLAN-----LNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred cCCEEE----eCchhhCCCCCeEEEEEec-----CCHHHHHHHHHHHHHHHHHH
Confidence 999999 6776511135789999743 34789999999999888755
No 132
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=4.4e-22 Score=206.59 Aligned_cols=315 Identities=18% Similarity=0.177 Sum_probs=204.6
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCCCE
Q 010008 107 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDR 185 (520)
Q Consensus 107 ~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD~ 185 (520)
.+.++++...+.+.+.. ...+.++++| +.++++||..+ -|.++||+.|+++++.++ ++|||+
T Consensus 5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE 67 (363)
T ss_dssp HHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred HHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence 44556666666655311 1135688888 67899999886 366799999999999998 899999
Q ss_pred EEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHH
Q 010008 186 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQI 265 (520)
Q Consensus 186 Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~i 265 (520)
|+++..++.+.. ..+...|. +++++++|++++.+|++.+++++++ ++|+|++. +.++...|+++|.++
T Consensus 68 Vi~p~~t~~~~~--------~ai~~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~ 135 (363)
T PF01041_consen 68 VIVPAYTFPATA--------SAILWAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAI 135 (363)
T ss_dssp EEEESSS-THHH--------HHHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHH
T ss_pred EecCCCcchHHH--------HHHHHhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHH
Confidence 999987664432 24555665 8999999999999999999999998 89998874 334446699999999
Q ss_pred HHHhCCEEEEechhhcccccccccCCCCCcccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCCCC----
Q 010008 266 ADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL---- 339 (520)
Q Consensus 266 a~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~---- 339 (520)
|+++|++||.|+||+.|....+..... ..|+.++|+| |.+....||+|+++++ ++.+++......+.
T Consensus 136 ~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~~~~~ 208 (363)
T PF01041_consen 136 ARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGRSRDA 208 (363)
T ss_dssp HHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTEETSE
T ss_pred HHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCcCccc
Confidence 999999999999999997765533222 4799999987 8898889999999986 66665543221111
Q ss_pred ---------CC-CChHH-HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecC--CCC--C-eeEEEEe
Q 010008 340 ---------QG-GPHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSG--GSD--N-HLVLVDL 402 (520)
Q Consensus 340 ---------~g-~p~~~-~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~--gt~--~-~~~~vd~ 402 (520)
.| ...++ ..||+ ++.++ ..+++..++.+++++.+.+.|.+ .++..... +.. + +.+.+-+
T Consensus 209 ~~~~~~~~~~g~n~rm~~~~AAi--gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~ 284 (363)
T PF01041_consen 209 FRRYRHELPPGYNFRMSELQAAI--GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRL 284 (363)
T ss_dssp CSTTEESSSS--B-B-BHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEE
T ss_pred cccccccccCCcccccHHHHHHH--HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence 01 01112 22332 23333 34567778888889999999987 45544432 211 1 2223333
Q ss_pred cCC-CCCHHHHHHHHhhcCeEEcCCC-CCCCC-CCCC-----------------CCEEEEccCCccccCCCHHHHHHHHH
Q 010008 403 RPM-GIDGARVEKILDMASITLNKNS-VPGDK-SALV-----------------PGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 403 ~~~-g~~~~~~~~~L~~~gI~v~~~~-~Pg~~-~~~~-----------------~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
... ..+.+.+.+.|.+.||.+...+ .|.+. +.+. ...|.+.+. ..++++|++++++
T Consensus 285 ~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~----~~lt~edv~~I~~ 360 (363)
T PF01041_consen 285 PDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIH----PRLTEEDVDYIAE 360 (363)
T ss_dssp TCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHS----TTSCHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCC----CCCCHHHHHHHhh
Confidence 322 1357889999999999998765 23321 1110 112444332 2578999999999
Q ss_pred HHH
Q 010008 463 FIH 465 (520)
Q Consensus 463 ~i~ 465 (520)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 874
No 133
>PLN02231 alanine transaminase
Probab=99.90 E-value=2.1e-21 Score=209.88 Aligned_cols=340 Identities=15% Similarity=0.125 Sum_probs=212.1
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccC---CCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y---~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
+.|+|-.++...|..+++.....+.+.. ..+| +......++.+...+++.+..|.+.+ . -+|.+|+|+
T Consensus 130 ~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y------~~s~G~~~lReaIA~~~~~r~g~~~~-p-e~I~iT~Ga~ 201 (534)
T PLN02231 130 SLLDKSETHGLFSADAIERAWQILDQIPGRATGAY------SHSQGIKGLRDAIAAGIEARDGFPAD-P-NDIFLTDGAS 201 (534)
T ss_pred ccCCCCCccccCCHHHHHHHHHHHHhcCCccccCc------CCCCCcHHHHHHHHHHHHhccCCCCC-c-ccEEEeCCHH
Confidence 3466655555566677776666665422 1123 33333456666666788777775422 1 267779998
Q ss_pred HHHHHHHHhhC-CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----C
Q 010008 170 PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----R 242 (520)
Q Consensus 170 ~A~~~~l~all-~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~-----~ 242 (520)
+|+..++.+++ .|||.|++++|.|.++.. .+...|. ++++|+++++ ++.+|+++|++.++.. +
T Consensus 202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~ 271 (534)
T PLN02231 202 PAVHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGIT 271 (534)
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCC
Confidence 89999999998 489999999998765431 2344555 6777778754 4689999999988652 6
Q ss_pred CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccc-cccCCCCC---------ccc---EEEeccC
Q 010008 243 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK---------YCD---VVTTTTH 304 (520)
Q Consensus 243 pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~~~~~p~~---------~aD---iv~~S~h 304 (520)
+|+|++..|+||+ .+ .+++|.++|+++|++||+|++ |..+++. +....++. .-| +++.|++
T Consensus 272 ~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEv-Y~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~S 350 (534)
T PLN02231 272 VRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEV-YQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVS 350 (534)
T ss_pred eEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc-chhcccCCCCCcccHHHHHhhhccccCCceEEEEeccC
Confidence 8998888999997 44 467888999999999999998 4555553 21111110 112 5567999
Q ss_pred ccc---CCCCceEEEee--CCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHh--cCchhHH-------HHHHH
Q 010008 305 KSL---RGPRGGMIFFK--KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKV-------YQNKV 370 (520)
Q Consensus 305 K~l---~GprgG~I~~~--~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~~~~~-------~~~~i 370 (520)
|.+ +|+|+||+++. ++ ++.+.+.+..... .+++...++++ ..+++.- .+..|+. ..+.+
T Consensus 351 K~~~g~pGlRiGy~~~~~~~~-----~l~~~l~k~~~~~-~~s~~~~Q~~~-~~~l~~p~~~~~~y~~~~~~~~~i~~~~ 423 (534)
T PLN02231 351 KGYYGECGKRGGYMEVTGFTS-----DVREQIYKVASVN-LCSNISGQILA-SLVMSPPKPGDESYESYMAEKDGILSSL 423 (534)
T ss_pred cccccCCccceEEEEEecCCH-----HHHHHHHHHHhhh-cCCChHHHHHH-HHHhCCCCCCcchHHHHHHHHHHHHHHH
Confidence 964 69999999863 22 5666554332211 23333333322 2233210 0122322 34678
Q ss_pred HHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecC-C-CC---------CHHH-HHHHHhhcCeEEcCCCCCCCC-CC-C
Q 010008 371 VSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP-M-GI---------DGAR-VEKILDMASITLNKNSVPGDK-SA-L 435 (520)
Q Consensus 371 ~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~-~-g~---------~~~~-~~~~L~~~gI~v~~~~~Pg~~-~~-~ 435 (520)
.++++.+.+.|++. |+.+..+ ..+.++|+++.. . .+ +... +..+|++.||.+ +||.. +. .
T Consensus 424 ~~r~~~l~~~L~~~~gi~~~~p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~v----vPGs~Fg~~~ 498 (534)
T PLN02231 424 ARRAKTLEDALNSLEGVTCNKA-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVV----VPGSGFGQVP 498 (534)
T ss_pred HHHHHHHHHHHhcCCCceecCC-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEE----eCCcccCCCC
Confidence 88889999999885 8887654 235666645531 1 11 1122 355778899999 66654 21 1
Q ss_pred CCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 436 VPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 436 ~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+..++|++.. .+++++++..+.|.+.++.
T Consensus 499 g~~~~Rit~~------~~~e~l~eal~RL~~~~~~ 527 (534)
T PLN02231 499 GTWHFRCTIL------PQEDKIPAIVSRLTEFHKS 527 (534)
T ss_pred CCCeEEEEeC------CCHHHHHHHHHHHHHHHHH
Confidence 2346999752 2468888888887776553
No 134
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.90 E-value=4.1e-21 Score=199.47 Aligned_cols=314 Identities=17% Similarity=0.211 Sum_probs=215.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccc
Q 010008 129 RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 208 (520)
Q Consensus 129 ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v 208 (520)
.-|+|.+.+.++| +.+++++|.++ -|.++||+.|+++++...++|||+| +...+ +... ...+
T Consensus 72 d~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~---f~Tt----~ahI 133 (460)
T PRK13237 72 EAYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMY---FTTT----RYHQ 133 (460)
T ss_pred hhhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccc---hHhh----HHHH
Confidence 3467777788898 57888999987 3667899999998766668999976 33222 1111 0113
Q ss_pred ccccceEEEEEcc---------cCCCCCCCCHHHHHHHhhhcC---CcEEEEc--CCCCC-CC---CCHHHHHHHHHHhC
Q 010008 209 SGTSIYFESMPYR---------LDESTGLVDYDMLEKTAILFR---PKLIIAG--ASAYP-RD---FDYPRMRQIADAVG 270 (520)
Q Consensus 209 ~~~g~~~~~v~~~---------~d~~~~~iD~d~le~~i~~~~---pklIi~~--~s~~p-~~---~d~~~i~~ia~~~g 270 (520)
...|. .++.+. .++.++.+|+++|++++++.. +++|.+. .+.++ .. .+++++.++|+++|
T Consensus 134 ~~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~G 211 (460)
T PRK13237 134 ELNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHG 211 (460)
T ss_pred HhCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcC
Confidence 33444 222221 124578999999999998632 2233322 22222 23 37899999999999
Q ss_pred CEEEEechhhcc---ccc---ccccCCC--------CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhccc--
Q 010008 271 ALLMMDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA-- 334 (520)
Q Consensus 271 ~~li~D~Ah~~g---li~---~~~~~~p--------~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~-- 334 (520)
+.|+.|+||..| ++. .+....+ +.++|.+++|+||.+.++-||+|+++++ ++.++++..
T Consensus 212 l~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~~~ 286 (460)
T PRK13237 212 IKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKELVV 286 (460)
T ss_pred CEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHhcc
Confidence 999999999988 441 1222222 3479999999999999999999999996 788887765
Q ss_pred CCCCC--CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC-------
Q 010008 335 VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM------- 405 (520)
Q Consensus 335 ~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~------- 405 (520)
.++|+ .|+.....++|+|++|.+... .+|.++..++.++|.+.|.+.|++++.+ +..|-+++|....
T Consensus 287 ~~eG~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~Gvpv~~p-~ggH~v~vda~~~lph~~~~ 362 (460)
T PRK13237 287 VYEGMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAAGVPIVEP-VGGHAVFLDARRFLPHLPQD 362 (460)
T ss_pred ccCCCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHCCCceecC-CCceEEEEEhHHhCCCCCcc
Confidence 45553 455445678899999998764 3788889999999999999999999975 4569888886432
Q ss_pred CCCHHH-HHHHHhhcCeEEc-CCCC-----CCCCCCCCC--CEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 406 GIDGAR-VEKILDMASITLN-KNSV-----PGDKSALVP--GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 406 g~~~~~-~~~~L~~~gI~v~-~~~~-----Pg~~~~~~~--~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
...+.. +..+..+.||... .+++ |.......+ .-+|+..| +|-.|.+.|+.+++.+..+.++...+
T Consensus 363 ~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaip---rr~yt~~h~~~v~~~~~~~~~~~~~~ 437 (460)
T PRK13237 363 QFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIP---RRVYTYAHMDVVADSVIKLYKHREDI 437 (460)
T ss_pred cChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccc---cccccHHHHHHHHHHHHHHHHhHhhc
Confidence 122333 3444567888642 2221 211111111 45899755 56789999999999999999877544
No 135
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=3.3e-21 Score=218.29 Aligned_cols=352 Identities=18% Similarity=0.166 Sum_probs=229.9
Q ss_pred ccceEec-CCCCChH-HHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIA-SENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Lia-sen~~~~-~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.+.|.. +..+.++ .|.+++...+.+.| +.|+..+..+....+.+| .++++++++||++++++ .|..|+|+ +
T Consensus 34 ~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~ 108 (805)
T PLN02724 34 GVVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATA 108 (805)
T ss_pred CCEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHH
Confidence 4577764 4456555 55555555554443 445433444444455565 68899999999987543 34456655 8
Q ss_pred HHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-------CCCCCCH--HHHHHHhh-
Q 010008 171 ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-------STGLVDY--DMLEKTAI- 239 (520)
Q Consensus 171 A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-------~~~~iD~--d~le~~i~- 239 (520)
|+..+..++ +++||+|++...+|.+.+. ... .....|. ++..++++. +.+.+|. +++++.++
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~-~~~----~a~~~G~--~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 181 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLG-IRE----YALEKGA--AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTS 181 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHH-HHH----HHHHcCC--eEEeccchhccccccccccccccchhhhhhhhhh
Confidence 999888888 8899999998888876542 111 1112344 444444431 1234443 66766542
Q ss_pred --------hcCCcEEEEcC-CCC-CCCCCHHHHHHHHHHh--------CCEEEEechhhcccccccccCCCCCcccEEEe
Q 010008 240 --------LFRPKLIIAGA-SAY-PRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFKYCDVVTT 301 (520)
Q Consensus 240 --------~~~pklIi~~~-s~~-p~~~d~~~i~~ia~~~--------g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~ 301 (520)
..++++|++.+ +|. +...|++.+.++++.. ++++++|+||++|.+..++... ++|++++
T Consensus 182 ~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~---~~Dfl~~ 258 (805)
T PLN02724 182 KLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRY---PADFVVV 258 (805)
T ss_pred hhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhc---CCCEEEE
Confidence 12568888874 333 3488999876655543 3689999999999876554332 5899999
Q ss_pred ccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCC-----------------------CCCCCChHHHHHHHHHHHHH
Q 010008 302 TTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFP-----------------------GLQGGPHNHTIGGLAVCLKH 357 (520)
Q Consensus 302 S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p-----------------------~~~g~p~~~~iaala~al~~ 357 (520)
|+|||++||.| |+++++++ +.+.+....+. .-.|++++..+++++.|++.
T Consensus 259 S~HK~~GgP~G~G~L~vr~~------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~ 332 (805)
T PLN02724 259 SFYKIFGYPTGLGALLVRRD------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL 332 (805)
T ss_pred ecceeccCCCCceEEEEehh------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH
Confidence 99999988998 99999883 33333221111 12578999999999999998
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHC-------CCEEecCC-------CCCeeEEEEecCC---CCCHHHHHHHHhhcC
Q 010008 358 AQSPEFKVYQNKVVSNCRALASRLVEL-------GYKLVSGG-------SDNHLVLVDLRPM---GIDGARVEKILDMAS 420 (520)
Q Consensus 358 ~~~~~~~~~~~~i~~na~~l~~~L~~~-------G~~v~~~g-------t~~~~~~vd~~~~---g~~~~~~~~~L~~~g 420 (520)
+...+.+...++....++++.+.|.+. +++++.+. ....++.+.+... .+...++..++.+.|
T Consensus 333 l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~g 412 (805)
T PLN02724 333 LNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSG 412 (805)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcC
Confidence 876677777888888899999999874 36666432 0123333343321 133456777788899
Q ss_pred eEEcCCCC--CCCC-C---------------------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 421 ITLNKNSV--PGDK-S---------------------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 421 I~v~~~~~--Pg~~-~---------------------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|.++.+.. |+-. . ....+.+|+|+..++| ++|+++++++|++....
T Consensus 413 I~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 413 IQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVS 488 (805)
T ss_pred cEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhc
Confidence 99986542 2200 0 0113789999998887 89999999999997654
No 136
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=2e-21 Score=204.97 Aligned_cols=321 Identities=18% Similarity=0.175 Sum_probs=207.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC--C
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 181 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ry-y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--~ 181 (520)
.+|.|++++...+. +|..|..+.|. |+-.+...++| +++++++|.+. .|..+||++||..++.++. .
T Consensus 61 ~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~~~i~~l~~~~ 130 (410)
T PRK13392 61 QHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSNDAALSTLGKLL 130 (410)
T ss_pred CCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHHhcCC
Confidence 37899999987664 45444444443 33333344555 67889999743 4667999999998888775 4
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCC--C
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPR--D 256 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~~~s~~p~--~ 256 (520)
|||.|+...+.|++.+. .+...|. ++..++. .|.+.+++.+.. .++++|++++++||+ .
T Consensus 131 ~g~~vi~~~~~h~s~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 131 PGCVILSDALNHASMIE--------GIRRSGA--EKQVFRH------NDLADLEEQLASVDPDRPKLIAFESVYSMDGDI 194 (410)
T ss_pred CCCEEEEehhhhHHHHH--------HHHHcCC--eEEEEeC------CCHHHHHHHHHhccCCCCEEEEEeCCCCCCccc
Confidence 89988876655544321 2233454 3333221 145555555432 278999999888876 7
Q ss_pred CCHHHHHHHHHHhCCEEEEechhhcccccc---ccc--CCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhh
Q 010008 257 FDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 257 ~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~--~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i 331 (520)
.|+++|.++|+++|+++++|++|..|.... +.. ....+..|+++.|++|+++++ |||+++++ ++.+.+
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-GG~~~~~~------~~~~~l 267 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-GGYIAASA------DLIDFV 267 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-cchhhcCH------HHHHHH
Confidence 899999999999999999999998776421 111 111124689999999998654 68998876 566655
Q ss_pred cccCCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHH
Q 010008 332 NNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGA 410 (520)
Q Consensus 332 ~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~ 410 (520)
.+...+.. ..+.+....++...+|+.... .....+++.++++++.+.|.+.|+++..+ +++++.+.+. ...+..
T Consensus 268 ~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~i~~~-~~~~~~ 342 (410)
T PRK13392 268 RSFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVMPS--PSHIVPVMVG-DPTLCK 342 (410)
T ss_pred HHhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEEEEeC-CHHHHH
Confidence 43322211 222222344555557776533 23456778888999999999889887543 3445444442 111234
Q ss_pred HHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 411 RVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 411 ~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.+.| ++.||.+.....|+. +...++|||+.+... +++|++++++.|.++++
T Consensus 343 ~~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~----t~edid~l~~aL~~~~~ 396 (410)
T PRK13392 343 AISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLH----DDEDIDALVAALVAIWD 396 (410)
T ss_pred HHHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCC----CHHHHHHHHHHHHHHHH
Confidence 566666 578999976433321 223468999987654 48999999999988865
No 137
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=2.8e-21 Score=200.68 Aligned_cols=336 Identities=14% Similarity=0.099 Sum_probs=209.4
Q ss_pred hhhccccChHHHHHHHHHHHH-hhccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 010008 71 DYSLGEADPEVCEIITKEKER-QFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 147 (520)
Q Consensus 71 ~~~l~~~d~~~~~~~~~e~~~-~~~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~ 147 (520)
+.++....+..+..+...... ....++|..++. +.++.+++++...... .+|+. ..| ..++++...++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G---~~~lr~~ia~~ 74 (364)
T PRK07865 4 SARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAG---TPELREAIVGW 74 (364)
T ss_pred cccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccC---CHHHHHHHHHH
Confidence 345666666666555443322 235678876653 3467888888764421 13432 112 23555556678
Q ss_pred HHHHcCCC---CCCCceeeecCChH-HHHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 148 ALAAFNLD---ENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 148 ~~~lfg~~---~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
+.+.+|.+ ++ +|.+++|+ +++..++.++ ++|||+|++++|.|.++.. .+...|. +++.++
T Consensus 75 l~~~~~~~~~~~~----~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~- 139 (364)
T PRK07865 75 LARRRGVTGLDPA----AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD- 139 (364)
T ss_pred HHHHcCCCCCCcc----cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC-
Confidence 87777754 54 67789998 8888777787 7999999999998765421 2233454 554542
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC---
Q 010008 223 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--- 294 (520)
Q Consensus 223 d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--- 294 (520)
++++++. .++|+|+++.++||+ .++ +++|.++|+++|++||+|+++. .+...+.....+.
T Consensus 140 -------~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 207 (364)
T PRK07865 140 -------SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRV 207 (364)
T ss_pred -------ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCccccccc
Confidence 2233322 378999998899997 444 6678888999999999999954 4443321111111
Q ss_pred -----cccEEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 295 -----YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 295 -----~aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
.-.+++.|++|.+ +|.|+||+++++ ++.+++.........+.+...+ +++..++.. ....++..
T Consensus 208 ~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~~ 278 (364)
T PRK07865 208 CGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ALVAELLEVRKHAGMMVPAPVQ-AAMVAALGD--DAHVREQR 278 (364)
T ss_pred cCCccceEEEEeechhccCCCceeeEEEecCH------HHHHHHHHHHHhcCCCcCHHHH-HHHHHHhCC--HHHHHHHH
Confidence 1238889999986 799999999877 6666654432111122223322 222223322 12235566
Q ss_pred HHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCC
Q 010008 368 NKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPA 446 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~ 446 (520)
+.+.++++.+.+.|++.|+.+..+ ..+.++|+.+. .+..++.+.|.+.||.+. ||+. ++..++++||++..
T Consensus 279 ~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~----pg~~f~~~~~~~iRi~~~~ 350 (364)
T PRK07865 279 ERYARRRAVLRPALEAAGFRVDHS-EAGLYLWATRG---EDCWDTVAWLAERGILVA----PGDFYGPAGAQHVRVALTA 350 (364)
T ss_pred HHHHHHHHHHHHHHHHcCCcccCC-CccEEEEEeCC---CCHHHHHHHHHHCCEEEe----CccccCcCCCCEEEEEecC
Confidence 777888888999998888776543 23455666652 245667788889999994 4432 22235789998642
Q ss_pred ccccCCCHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~ 465 (520)
+++++++.++.|.
T Consensus 351 ------~~~~~~~~~~~l~ 363 (364)
T PRK07865 351 ------TDERIAAAVERLA 363 (364)
T ss_pred ------CHHHHHHHHHHhh
Confidence 3688888887763
No 138
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.90 E-value=3.2e-21 Score=203.38 Aligned_cols=328 Identities=14% Similarity=0.123 Sum_probs=202.1
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhcc----CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCceeeec
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQP 165 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~----y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg--~~~~~~~~~V~~ 165 (520)
+.++|..+++. +++.+.+++...+... ...+|+. ..| ...+.+...+++.+..| ++++ +|.+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~LR~aia~~~~~~~g~~~~~~----~I~i 104 (409)
T PRK07590 35 KIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQG---YDFLREKIAENDYQARGCDISAD----EIFI 104 (409)
T ss_pred ceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCC---CHHHHHHHHHHHHHhcCCcCChh----hEEE
Confidence 56888888764 5788889888776542 1123321 112 23455445556655555 4554 6777
Q ss_pred CChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccce---------EEEEEcccCCC-CCCCCHHHH
Q 010008 166 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDES-TGLVDYDML 234 (520)
Q Consensus 166 ~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~---------~~~v~~~~d~~-~~~iD~d~l 234 (520)
|+|+ +|+..+ ..+++|||+|++.+|.|.++.. .+...|.. .++++++++++ ++.+|.++
T Consensus 105 t~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~- 174 (409)
T PRK07590 105 SDGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE- 174 (409)
T ss_pred CCCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCcc-
Confidence 9998 777764 5677999999999998865532 12223331 12667777643 24455321
Q ss_pred HHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---Cc-c--cEEEecc
Q 010008 235 EKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-C--DVVTTTT 303 (520)
Q Consensus 235 e~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~~-a--Div~~S~ 303 (520)
.++|+|+++.|+||+ .++ +++|.++|+++|++||+|+++ ..+...+..+.++ +. . -|++.|+
T Consensus 175 ------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 175 ------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred ------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcchhhCCCcccceEEEecC
Confidence 389999998999997 444 567778899999999999984 4444433222222 22 1 2667899
Q ss_pred Cccc--CCCCceEEEeeCCCcchhhHHHhh------------cccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHH
Q 010008 304 HKSL--RGPRGGMIFFKKDPVLGVELESAI------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 369 (520)
Q Consensus 304 hK~l--~GprgG~I~~~~~~~~~~~l~~~i------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 369 (520)
+|++ +|.|.||+++++ ++.+.+ .........+.+...+. +++.++..-.....++..+.
T Consensus 248 SK~~~~pGlRiG~~i~~~------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~-a~~~~l~~~~~~~~~~~~~~ 320 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPK------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQR-AAEAVYSPEGKAQIKELIDY 320 (409)
T ss_pred ccccCCcCceeEEEEcCH------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHH-HHHHHhcCCcHHHHHHHHHH
Confidence 9976 799999999987 454411 11111111122223333 33334432111233566778
Q ss_pred HHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCc
Q 010008 370 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDK-SALVPGGIRIGSPAM 447 (520)
Q Consensus 370 i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~ 447 (520)
+.++++.+.+.|.+.|+.+..+ ..+.++|+++.. +++..++.. ++++.||.+. ||.. +....+++||+..
T Consensus 321 ~~~~r~~l~~~L~~~~~~~~~~-~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~----pg~~f~~~~~~~iRi~~~-- 392 (409)
T PRK07590 321 YMENAKIIREGLESAGFEVYGG-VNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGT----PGSGFGPSGEGYFRLSAF-- 392 (409)
T ss_pred HHHHHHHHHHHHHhcCCceecC-CcceEEEEECCC-CCCHHHHHHHHHHHCCEEEe----ChhHhCCCCCCEEEEEcc--
Confidence 8888999999999888776543 235677888753 455555544 5567899994 4443 2223568999842
Q ss_pred cccCCCHHHHHHHHHHHHHH
Q 010008 448 TTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 448 tt~g~~~~d~~~la~~i~~~ 467 (520)
.+++++++..+.|.++
T Consensus 393 ----~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 393 ----GSRENVLEAMERIKKA 408 (409)
T ss_pred ----CCHHHHHHHHHHHHhh
Confidence 2368888888877654
No 139
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.89 E-value=4.8e-21 Score=201.57 Aligned_cols=327 Identities=21% Similarity=0.235 Sum_probs=210.4
Q ss_pred ecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCCC-CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 99 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 99 iasen~~----~~~V~ea~~s~l~~~y~~G~p~~ryy-~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
..|.+|. +|.|++|+...+. +|..|..+.|.. +..+...++| +.+++++|.+. .+..+||++||.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an~ 119 (402)
T TIGR01821 50 WCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAND 119 (402)
T ss_pred eEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHHH
Confidence 3466663 6899999988774 455555555533 3344445555 67889999653 466789999999
Q ss_pred HHHHhhCC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 010008 174 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 248 (520)
Q Consensus 174 ~~l~all~--pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~ 248 (520)
.++..+.+ +||.|+.....|+..+. .+...|. ....++ ..|+++++++++. .++++|++
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~~ 183 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKIIAF 183 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEEEE
Confidence 99988765 78877766555533221 1222343 222322 2377888877763 25788988
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc---cccC-CCC-CcccEEEeccCcccCCCCceEEEeeCCC
Q 010008 249 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDP 321 (520)
Q Consensus 249 ~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~~-~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~ 321 (520)
+++++++ ..|+++|+++|+++|++|++|++|..|.... +... ..+ ...|+++.|++|.+++ -|||+++++
T Consensus 184 e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~GG~i~~~~-- 260 (402)
T TIGR01821 184 ESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGV-VGGYIAASR-- 260 (402)
T ss_pred cCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhcc-CCceeecCH--
Confidence 8777664 7899999999999999999999998775421 1111 111 1368999999999854 568988887
Q ss_pred cchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEE
Q 010008 322 VLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 400 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~v 400 (520)
++.+.+.....+. ..++.+...+++...+++.+... ....++..++++++.+.|++.|++++.+ .++++.+
T Consensus 261 ----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~i 332 (402)
T TIGR01821 261 ----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIPN--PSHIVPV 332 (402)
T ss_pred ----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCEEEE
Confidence 5666554321111 12223333444444577765432 4445566788999999999888887653 3445555
Q ss_pred EecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+.. .....++.+.| ++.||.+.....|.- +...+.|||+.+... +++|++++.+.|+++++
T Consensus 333 ~~~~-~~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~----t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 333 IIGD-AALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAH----TDKMIDDLVEALLLVWD 395 (402)
T ss_pred EeCC-HHHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCC----CHHHHHHHHHHHHHHHH
Confidence 4421 11234566665 567999975433321 223468999987654 58999999999998875
No 140
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=2.5e-21 Score=198.45 Aligned_cols=319 Identities=16% Similarity=0.170 Sum_probs=202.6
Q ss_pred ceEecCCCC-ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 010008 96 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 174 (520)
Q Consensus 96 i~Liasen~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~ 174 (520)
|+|..++|+ +||.+++++....... .+ |+..+...++| +.+++++|+++. +...+|++++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~----~~la~~~g~~~~-----~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQ----DYAAELSGKEAA-----LFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHH----HHHHHHhCCCeE-----EEeCchHHHHHH
Confidence 456666765 7899999986543321 12 32234455666 567889999863 334667789998
Q ss_pred HHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEc
Q 010008 175 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 249 (520)
Q Consensus 175 ~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pklIi~~ 249 (520)
++.++++|||+|+++.+.|...+..+ .....+ ..+.+.++++ +++.+|+++|++++++. ++|+|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 88899999999998776553111100 011222 1255566665 46899999999988653 58899998
Q ss_pred CCCCCCCCCHH---HHHHHHHHhCCEEEEechhhcccccc-cccCCCC-CcccEEEeccCcccCCCCceEEEeeCCCcch
Q 010008 250 ASAYPRDFDYP---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 250 ~s~~p~~~d~~---~i~~ia~~~g~~li~D~Ah~~gli~~-~~~~~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~ 324 (520)
+|+++...+.+ +|.++|+++|++|++|+||..+.... +.....+ .+.|.++.|+||.++.+.||++++++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 88777766655 55678889999999999976432110 1111011 24576667899988766666788877
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecC
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 404 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~ 404 (520)
++.+.+.....+. .++......+ .+.++..+. +..++.++..++++++.+.|.+.|+++..+ ..+++++++..
T Consensus 212 -~~i~~~~~~~~~~-~~~~~~~~~~-~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~~nfv~~~~~~ 284 (333)
T PRK10534 212 -DYIKRARRWRKMT-GGGMRQAGIL-AAAGLYALK--HNVARLQEDHDNAAWLAEQLREAGADVMRQ--DTNMLFVRVGE 284 (333)
T ss_pred -HHHHHHHHHHHHh-CCchhhHHHH-HHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCccCCC--CceEEEEECCc
Confidence 6766665433321 1111111111 111222111 123445566677889999999999987654 35677877742
Q ss_pred CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 405 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 405 ~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.+..++.+.|.+.||.+. |+ ..+|++... | .++++++++.+.|++.+
T Consensus 285 --~~~~~~~~~l~~~gi~v~----~~-------~~~rl~~~~---r-~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 285 --EQAAALGEYMRERNVLIN----AS-------PIVRLVTHL---D-VSREQLAEVVAHWRAFL 331 (333)
T ss_pred --hhHHHHHHHHHHcCeeec----CC-------ceEEEEEEe---C-CCHHHHHHHHHHHHHHh
Confidence 245678899999999994 32 157886532 2 46899999999998654
No 141
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.89 E-value=1.1e-20 Score=199.26 Aligned_cols=327 Identities=19% Similarity=0.222 Sum_probs=209.3
Q ss_pred ecCCCC----ChHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 99 IASENF----TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 99 iasen~----~~~~V~ea~~s~l~~~y~~G~p~~ry-y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
..|.|| .+|.|++++...+. +|..|..+.|. |+..+...++| +.+++++|.+. .+..+||++||.
T Consensus 51 ~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~an~ 120 (407)
T PRK09064 51 WCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVSND 120 (407)
T ss_pred EECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHHHH
Confidence 446655 37899999987764 45444444443 33355555565 67888888643 456689999999
Q ss_pred HHHHhhCC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 010008 174 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 248 (520)
Q Consensus 174 ~~l~all~--pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~ 248 (520)
.++..+.. +++.|+.....|.+.+ . .+...+. +...++ ..|+++++++++. .++++|++
T Consensus 121 ~ai~~l~~~~~~~~i~~~~~~h~s~~-~-------~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 121 ATLSTLAKLIPDCVIFSDELNHASMI-E-------GIRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred HHHHHHhCCCCCCEEEEeCcchHHHH-H-------HHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeEEEE
Confidence 88887754 7777766554443221 1 1122333 222322 2477888887763 26789988
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc-c--ccC-CCC-CcccEEEeccCcccCCCCceEEEeeCCC
Q 010008 249 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDP 321 (520)
Q Consensus 249 ~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~~~-~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~ 321 (520)
+++.+++ ..|+++|+++|+++|++|++|++|..|.... + ... ..+ ...|++++|++|.+ |+.||++++++
T Consensus 185 ~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~-- 261 (407)
T PRK09064 185 ESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA-- 261 (407)
T ss_pred eCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH--
Confidence 8766654 7799999999999999999999998775321 1 100 111 23589999999998 45679999887
Q ss_pred cchhhHHHhhcccCCCC--CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 322 VLGVELESAINNAVFPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+.+.....+. ..+.+ ....++...+++.+... ....+++.++++++.+.|.+.|++++.+ ..+++.
T Consensus 262 ----~~~~~l~~~~~~~~~t~~~~-~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~iv~ 332 (407)
T PRK09064 262 ----ALVDAVRSYAPGFIFTTSLP-PAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMPN--ESHIVP 332 (407)
T ss_pred ----HHHHHHHHhCccccccCcCC-HHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEEE
Confidence 5655554322221 22333 33334444567665432 3446778889999999999889887653 245555
Q ss_pred EEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.+.. ..+..++.+.| ++.||.+.....|.. +.+.+.+||+.+... +++|++++++.|+++++.
T Consensus 333 i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~~----t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 333 VMVGD-PEKCKKASDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPFH----TDEMIDHLVEALVEVWAR 397 (407)
T ss_pred EEeCC-HHHHHHHHHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCCC----CHHHHHHHHHHHHHHHHH
Confidence 55431 12345566665 567999976433321 223467999977554 589999999999988753
No 142
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=2.9e-21 Score=206.29 Aligned_cols=343 Identities=15% Similarity=0.153 Sum_probs=207.5
Q ss_pred ccceEecCCC-CChHHHHHHHhhh-hhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 010008 94 KSLELIASEN-FTSRAVMEAVGSC-LTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen-~~~~~V~ea~~s~-l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sGs 169 (520)
+.|+|..++. +.++..++++... +... ||. ........|+.+.+++++.++. .+.+- .+|.+++|+
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----Y~~-----p~g~~~~~e~iv~~y~~~~~~~~~~~~~~-~~V~it~Ga 164 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGDN----YPV-----PDRMLPHSEKIVHQYLIQEMCGNKPPPGE-FDLFAVEGG 164 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcCC----CCC-----CCCCHHHHHHHHHHHHHhhccCCCCCCCc-CeEEEeCCH
Confidence 4577776663 3344444554444 3222 321 1112345666666677766543 22110 267778888
Q ss_pred -HHHHHHHHh-----hCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-C-----CCCCHHHHHHH
Q 010008 170 -PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T-----GLVDYDMLEKT 237 (520)
Q Consensus 170 -~A~~~~l~a-----ll~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~-----~~iD~d~le~~ 237 (520)
+|+..++.+ +++|||+|++++|.|..+.. .+.+.+...++++++.+++ . +.+|.++++++
T Consensus 165 t~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 165 TAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred HHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 888888876 78999999999997755431 2233443456777666532 2 78999999998
Q ss_pred hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC---cccEEEeccCccc
Q 010008 238 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL 307 (520)
Q Consensus 238 i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~---~aDiv~~S~hK~l 307 (520)
+++ ++|+|++++|+||+ .++ +++|.++|+++ +++||+|+++. .+.. .+.+.+. .--+++.|++|++
T Consensus 237 ~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~sl~~~~~~~vI~v~SfSK~f 312 (521)
T TIGR03801 237 RDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD--DFRSLFAELPYNTIGVYSFSKYF 312 (521)
T ss_pred cCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc--cccchhhhCCCCEEEEEcchhhc
Confidence 876 89999999999997 454 67778889887 99999999853 4432 1122222 1237889999986
Q ss_pred --CCCCceEEEeeCCCc---ch----hhHHHhhcc-----------------------cCCC-CCC--CCChHHHHH--H
Q 010008 308 --RGPRGGMIFFKKDPV---LG----VELESAINN-----------------------AVFP-GLQ--GGPHNHTIG--G 350 (520)
Q Consensus 308 --~GprgG~I~~~~~~~---~~----~~l~~~i~~-----------------------~~~p-~~~--g~p~~~~ia--a 350 (520)
+|||.||++.+++.. .. .+..+.+++ .+.. ... .+|.-.+++ +
T Consensus 313 g~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a 392 (521)
T TIGR03801 313 GATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 392 (521)
T ss_pred cCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHH
Confidence 899999999986310 00 001111110 0000 011 233233334 2
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec-CCCCCeeEEEEecCCC---------------CCH-HHHH
Q 010008 351 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVLVDLRPMG---------------IDG-ARVE 413 (520)
Q Consensus 351 la~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~-~gt~~~~~~vd~~~~g---------------~~~-~~~~ 413 (520)
+..++.. .....++..+.+.++++.+.+.| |+.+.. +....+++++|+...+ .+. +.+.
T Consensus 393 ~~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~ 468 (521)
T TIGR03801 393 LFALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLF 468 (521)
T ss_pred HHHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHH
Confidence 3223332 11223566677777777777777 554321 2223567788886321 123 4466
Q ss_pred HHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 414 KILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 414 ~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+++++.||.+ +||.......+++||++.. .++++++++.+.|.+.+...
T Consensus 469 ~L~~e~gV~v----~PG~~Fg~~~~~vRisla~-----l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 469 RLAEETGIVL----LPGGGFGGPEWSVRVSLAN-----LNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHHhCCEEE----eCchhcCCCCCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Confidence 7788999999 6776521124679999743 34789999999999887644
No 143
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=9.8e-21 Score=202.88 Aligned_cols=336 Identities=16% Similarity=0.191 Sum_probs=215.8
Q ss_pred ccceEecCC--C-CChHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 94 KSLELIASE--N-FTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liase--n-~~~~~V~ea~~s~l~~~y~~G~p~~r-yy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
+.|+|..+. + ..++.|++++...+. +|..|+.+.| +|+..+...++| ++++++++.+. .|..++|.
T Consensus 110 ~~id~~s~~~lgl~~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G~ 179 (481)
T PLN02822 110 DVVNFASANYLGLIGNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYGL 179 (481)
T ss_pred eEEEeECCCcCCCCCCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCHH
Confidence 457775432 1 258999999988775 4555676655 456555555555 78889999763 35557887
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh--------c
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------F 241 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~--------~ 241 (520)
.++.+++.+++++||.|+.....|.+.. ..+.+.+. +++.++.+ |.++++..+++ .
T Consensus 180 ~a~~sai~a~~~~gd~Ii~d~~~H~s~~--------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 180 STIFSVIPAFCKKGDIIVADEGVHWGIQ--------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCccHHHH--------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhcccC
Confidence 7899999999999999997655443221 12334454 55565543 33444333321 1
Q ss_pred CC-cEEEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEechhhcccccc-c--c--cCC-CCCcccEEEeccCcccCCCCc
Q 010008 242 RP-KLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--V--VAD-PFKYCDVVTTTTHKSLRGPRG 312 (520)
Q Consensus 242 ~p-klIi~~~s~--~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~--~~~-p~~~aDiv~~S~hK~l~Gprg 312 (520)
++ ++|++.... .+...|+++|+++|++||++|++|++|..|.... | . +.. +....|++++|++|++ |..|
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~G 322 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEG 322 (481)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCC
Confidence 34 677776443 3448899999999999999999999998775431 1 1 111 1124789999999998 4667
Q ss_pred eEEEeeCCCcchhhHHHhhcccCCCCCCCC--ChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEe
Q 010008 313 GMIFFKKDPVLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 389 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~--p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~ 389 (520)
|++++++ ++.+.+......+..++ |...+.|+++ +|+... ...+..+++.++++.+.+.|.+. |+.+.
T Consensus 323 G~i~g~~------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~-aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 393 (481)
T PLN02822 323 GFCTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAIT-AIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIG 393 (481)
T ss_pred eEEEcCH------HHHHHHHhcCCceeeccccCHHHHHHHHH-HHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 9999987 56665543322223332 3444444443 676543 23567788999999999999884 88775
Q ss_pred cCCCCCeeEEEEecCC-CC---C---HHHHHHH-HhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 390 SGGSDNHLVLVDLRPM-GI---D---GARVEKI-LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 390 ~~gt~~~~~~vd~~~~-g~---~---~~~~~~~-L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
.+ ..+.++++.+... +. + ..++.+. |+++||.+.....|.-.....+.++|+++.+ +++++|+++++
T Consensus 394 ~~-~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~----~~t~edI~~~~ 468 (481)
T PLN02822 394 SN-TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSA----GHTESDILKAS 468 (481)
T ss_pred CC-CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECC----CCCHHHHHHHH
Confidence 43 2456777777431 10 1 1334444 4589999975322321111124579997653 35699999999
Q ss_pred HHHHHHHHH
Q 010008 462 DFIHEGVEI 470 (520)
Q Consensus 462 ~~i~~~l~~ 470 (520)
+.|++++..
T Consensus 469 ~~l~~~~~~ 477 (481)
T PLN02822 469 ESLKRVAAS 477 (481)
T ss_pred HHHHHHHHH
Confidence 999988764
No 144
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-20 Score=197.29 Aligned_cols=331 Identities=18% Similarity=0.201 Sum_probs=207.3
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC--CCCCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg--~~~~~~~~~V~~~sGs 169 (520)
+.++|..+++ .+++.+.+++...... ..+|+. ..| ..++.+...+++. ..| ++++ +|.+++|+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~---~~g---~~~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSH---SQG---IPELREAFAKYYK-KWGIDVEPD----EILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCC---CCC---CHHHHHHHHHHHH-HhCCCCCcc----eEEEcCCh
Confidence 4577877665 3678888888765422 123332 112 2344433334443 233 4554 55567776
Q ss_pred -HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC-C-CCHHHHHHHhhhcCCcEE
Q 010008 170 -PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-L-VDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 170 -~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~-~-iD~d~le~~i~~~~pklI 246 (520)
+|+..++.++++|||+|++++|.|..+.. .....|. +++.++++.+++ . .|++++++++++ ++++|
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 89999999999999999999987654321 1223454 555666653333 3 468999999877 89999
Q ss_pred EEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC--c-cc--EEEeccCccc--CCCCce
Q 010008 247 IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 247 i~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~--~-aD--iv~~S~hK~l--~GprgG 313 (520)
++++|+||+ .. ++++|.++|+++|+++++|++ +.++.+.+. .++... . .+ +++.|+||++ +|.|.|
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~-y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEV-YREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecc-chhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 988888887 34 578899999999999999998 445554432 122211 1 22 7889999987 588999
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCC
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 392 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~g 392 (520)
|++++++ ++.+.+....... .+.+...+. +++.+++.. ...+++..+.+.++++.+.+.|.+. |+.+..+
T Consensus 246 ~~~~~~~-----~~~~~~~~~~~~~-~~~s~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p- 316 (397)
T PRK07568 246 CLISKNK-----ELIAAAMKLCQAR-LSPPTLEQI-GAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP- 316 (397)
T ss_pred EEecCCH-----HHHHHHHHHhhcc-CCCCcHHHH-HHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-
Confidence 9998643 5555443222111 233333333 333345421 2234666777888889999999874 6665443
Q ss_pred CCCeeEEEEecCCCCCHHHHHHHHh-h-----cCeEEcCCCCCCCC----CCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 393 SDNHLVLVDLRPMGIDGARVEKILD-M-----ASITLNKNSVPGDK----SALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 393 t~~~~~~vd~~~~g~~~~~~~~~L~-~-----~gI~v~~~~~Pg~~----~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
..+.++|+++.. .+..++.+.|. + .||.+. ||.. ....++++||+.. .+++++++..+
T Consensus 317 ~g~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~gv~v~----pg~~f~~~~~~~~~~iRls~~------~~~~~~~~~~~ 384 (397)
T PRK07568 317 KGAFYIIAKLPV--DDAEDFAKWLLTDFNYNGETVMVA----PASGFYATPGLGKNEIRIAYV------LNEEDLKRAME 384 (397)
T ss_pred CcceEEEEecCC--CCHHHHHHHHHhhcccccceEEEe----CchHhcCCCCCCCCeEEEEEe------CCHHHHHHHHH
Confidence 234556777743 24555555553 3 689984 4432 1123468999863 23688999998
Q ss_pred HHHHHHHH
Q 010008 463 FIHEGVEI 470 (520)
Q Consensus 463 ~i~~~l~~ 470 (520)
.|.++++.
T Consensus 385 ~l~~~l~~ 392 (397)
T PRK07568 385 ILKEALEK 392 (397)
T ss_pred HHHHHHHH
Confidence 88887764
No 145
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.89 E-value=5.6e-21 Score=198.85 Aligned_cols=320 Identities=13% Similarity=0.113 Sum_probs=206.4
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
..++..++++...+...+. ++..+.+.++| +++++++|.+. .|.+.||++|+.+++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 3456667777777655431 21124456666 67888888864 244567779999888888 899
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHH
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 262 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i 262 (520)
||+|++++++|.+... .+...|. +++.++++++++.+|++++++++++ ++|+|+..++ ++...|+++|
T Consensus 71 Gd~Viv~~~t~~~~~~--------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~-~G~~~d~~~I 138 (376)
T TIGR02379 71 GDEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY-AGVACDMDTI 138 (376)
T ss_pred cCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-CCCccCHHHH
Confidence 9999999987755421 2334455 7788888876788999999999987 8999986543 4568899999
Q ss_pred HHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCc--cc-CCCCceEEEeeCCCcchhhHHHhhcccCCCCC
Q 010008 263 RQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK--SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGL 339 (520)
Q Consensus 263 ~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK--~l-~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~ 339 (520)
.++|+++|++||+|++|..|....+.... ...|+.++|+|+ .+ +|++||+++++++ ++.+++......|.
T Consensus 139 ~~la~~~~i~vIeDaa~~~g~~~~~~~~g--~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~~g~ 211 (376)
T TIGR02379 139 MALANKHQLFVIEDAAQGVMSTYKGRALG--SIGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIREKGT 211 (376)
T ss_pred HHHHHHCCCEEEEECccccCCccCCcccC--CCCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHHhCC
Confidence 99999999999999999887644332111 145888888885 44 5779999999875 55554432111000
Q ss_pred -----------------CCC-ChHH-HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC---C-CEEe--cCCC-
Q 010008 340 -----------------QGG-PHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS- 393 (520)
Q Consensus 340 -----------------~g~-p~~~-~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~---G-~~v~--~~gt- 393 (520)
.|. ..+. ..||+. +.++ ..+++..++.+++++.+.+.|.+. + ..+. .++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g--~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~ 287 (376)
T TIGR02379 212 NRSQFFRGEVDKYTWRDIGSSYLPSELQAAYL--WAQL--EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQ 287 (376)
T ss_pred CCccccccCCCcceeeeecccCCccHHHHHHH--HHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCe
Confidence 111 1111 223332 2222 234556677777777778887652 2 2221 1121
Q ss_pred -CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCC----CC-------------CCEEEEccCCccccCCCHH
Q 010008 394 -DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSA----LV-------------PGGIRIGSPAMTTRGFSEK 455 (520)
Q Consensus 394 -~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~----~~-------------~~giRig~~~~tt~g~~~~ 455 (520)
..|++++.+.. +.+.+++.+.|.+.||.++..+.|.+..+ +. ...|.+ |.. .+++++
T Consensus 288 ~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~L--P~~--~~l~~~ 362 (376)
T TIGR02379 288 HNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRL--PLY--YGLSKE 362 (376)
T ss_pred eeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEc--cCC--CCCCHH
Confidence 11344455532 34678899999999999886665654311 10 112444 322 358899
Q ss_pred HHHHHHHHHHHHH
Q 010008 456 EFVAIADFIHEGV 468 (520)
Q Consensus 456 d~~~la~~i~~~l 468 (520)
|++++++.|++++
T Consensus 363 ~~~~i~~~i~~~~ 375 (376)
T TIGR02379 363 DQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 146
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=6.6e-21 Score=202.53 Aligned_cols=342 Identities=16% Similarity=0.161 Sum_probs=217.0
Q ss_pred ccceEecCCCCC-hHHHHHHHhhhhhc-----cCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC----CCCCCCceee
Q 010008 94 KSLELIASENFT-SRAVMEAVGSCLTN-----KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 163 (520)
Q Consensus 94 ~~i~Liasen~~-~~~V~ea~~s~l~~-----~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg----~~~~~~~~~V 163 (520)
..|+|...||.+ ...+.+.+.+...- .+.......-||++......+.+...+++.+.+| ++++ +|
T Consensus 48 g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~I 123 (447)
T PLN02607 48 GVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RI 123 (447)
T ss_pred ceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----He
Confidence 358999999975 44555555443220 0100001112344333345666666677777776 4554 56
Q ss_pred ecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 010008 164 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL 240 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~-~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~ 240 (520)
.+++|+ +|+.+++.++++|||.|++++|.|+++.. .+. ..|. ++++++++.+ ++.+|.++++++++.
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~--~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGV--KIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCc--EEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 678988 89999999999999999999998876532 122 2344 6667766643 357999999998764
Q ss_pred -----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccc-cCCCC------C--c-cc--E
Q 010008 241 -----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------K--Y-CD--V 298 (520)
Q Consensus 241 -----~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~------~--~-aD--i 298 (520)
.++|+|++++|+||+ ..+ +++|.++|+++|+++|+|++ |++.++.+. +.+.. . . .+ +
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEi-Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~ 272 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEI-YSGSVFSASEFVSVAEIVEARGYKGVAERVH 272 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecc-ccccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence 378999999999997 444 77888999999999999998 455444321 11110 0 0 12 5
Q ss_pred EEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-----HHHHHHHH
Q 010008 299 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-----KVYQNKVV 371 (520)
Q Consensus 299 v~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-----~~~~~~i~ 371 (520)
++.|++|.+ +|.|.|++++.++ ++...+...... .+.++..+ .+++..|. +.+| .+..+++.
T Consensus 273 vi~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~~~~--~~~s~~~q-~~~~~~L~---d~~~~~~~l~~~r~~l~ 341 (447)
T PLN02607 273 IVYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSF--TLVSSQTQ-HLLASMLS---DEEFTENYIRTNRERLR 341 (447)
T ss_pred EEEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHHhhc--CCCCHHHH-HHHHHHhC---CchhHHHHHHHHHHHHH
Confidence 778999976 7899999998542 555544432211 11122222 22222232 2222 34456667
Q ss_pred HHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC---C-CCH-HHHH-HHHhhcCeEEcCCCCCCCC-CCCCCCEEEEcc
Q 010008 372 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM---G-IDG-ARVE-KILDMASITLNKNSVPGDK-SALVPGGIRIGS 444 (520)
Q Consensus 372 ~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~---g-~~~-~~~~-~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~ 444 (520)
++++.+.+.|++.|+++..+ ....++|++++.. . .+. .++. ++++++||.+ .||.. ....++++||++
T Consensus 342 ~~~~~~~~~L~~~gi~~~~~-~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v----~pG~~f~~~~~g~fRi~f 416 (447)
T PLN02607 342 KRYEMIVQGLRRAGIECLKG-NAGLFCWMNLSPLLETPTREGELALWDSILREVKLNI----SPGSSCHCSEPGWFRVCF 416 (447)
T ss_pred HHHHHHHHHHHhCCCCcccC-CeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEE----cCccccCCCCCCEEEEEe
Confidence 77888889999888876553 3356788888531 0 122 2344 5566789999 45554 233578999986
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 445 PAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 445 ~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.. ..++++++..+.|.+++...
T Consensus 417 a~-----~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 417 AN-----MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred cc-----CCHHHHHHHHHHHHHHHHHH
Confidence 53 34788999999998888654
No 147
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=1.5e-21 Score=200.84 Aligned_cols=282 Identities=17% Similarity=0.115 Sum_probs=191.6
Q ss_pred chhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhCC------------CCC--EEEEcCCCCCcccc
Q 010008 134 NEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PHD--RIMGLDLPHGGHLS 198 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs~A~~~~l~all~------------pGD--~Vl~~~~~~~ghls 198 (520)
.+...++|+.+++++++++|++ .+.. .+.+++|++||+.++.++.. +|| .|++.++.|.+..
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~- 109 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE- 109 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH-
Confidence 3456789999999999999997 3222 24456666999988888742 333 6777776654321
Q ss_pred ccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCC
Q 010008 199 HGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGA 271 (520)
Q Consensus 199 ~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~ 271 (520)
+.....|. +++.+++++ ++.+|+++|++.+++. +|++|+++.+++++ ..|+++|.++|+++|+
T Consensus 110 -------~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~ 179 (345)
T cd06450 110 -------KAAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL 179 (345)
T ss_pred -------HHHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC
Confidence 12233344 566666663 4689999999998752 57888877666654 7799999999999999
Q ss_pred EEEEechhhcccccccccC---CCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHH
Q 010008 272 LLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHT 347 (520)
Q Consensus 272 ~li~D~Ah~~gli~~~~~~---~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~ 347 (520)
++++|+||..+........ ..+.++|++++|+||++.+|.+ |+++.+
T Consensus 180 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------------- 230 (345)
T cd06450 180 WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------------- 230 (345)
T ss_pred eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------
Confidence 9999999877764322111 1123689999999999877655 665432
Q ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCC---CCCHHHHHHHHhhcCeEE
Q 010008 348 IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPM---GIDGARVEKILDMASITL 423 (520)
Q Consensus 348 iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~---g~~~~~~~~~L~~~gI~v 423 (520)
+.++..+++.+...++++..++..++++++.+.|.+. |+.++.+. +..++.+.+.+. +++..++.+.|.+.|+.+
T Consensus 231 ~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~ 309 (345)
T cd06450 231 ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWH 309 (345)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEE
Confidence 2333445555544567888889999999999999874 78776532 345556655432 344567888888886544
Q ss_pred cCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 424 NKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 424 ~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
.. +.... .++.+|++..... .+++|++++++.|++
T Consensus 310 ~~----~~~~~-~~~~lRis~~~~~---~t~~di~~l~~~l~~ 344 (345)
T cd06450 310 VP----ATTLG-GPNVLRFVVTNPL---TTRDDADALLEDIER 344 (345)
T ss_pred EE----eeEEC-CeEEEEEEecCCC---CCHHHHHHHHHHHHh
Confidence 21 11101 3568999986542 248999999998865
No 148
>PRK02769 histidine decarboxylase; Provisional
Probab=99.89 E-value=4.5e-20 Score=191.68 Aligned_cols=316 Identities=16% Similarity=0.115 Sum_probs=210.1
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCC-CceeeecCChHHHHHHHHHhh--CCCC
Q 010008 107 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAI--LKPH 183 (520)
Q Consensus 107 ~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~-~~~~V~~~sGs~A~~~~l~al--l~pG 183 (520)
...++.+...+.+.+ |.|......|.. ..++|+.++++++++||+++++ |+ +.+++||++|+.++.+. +.|+
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence 345555555555543 555433222222 3568888999999999998654 32 22344569988766543 4688
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--CCCCH
Q 010008 184 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFDY 259 (520)
Q Consensus 184 D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p--~~~d~ 259 (520)
++|++++.+|.+.. +.....|.... .++++ +++.+|+++|++++++. +|.+|+++..++. ...|+
T Consensus 111 ~~ii~s~~~H~Sv~--------ka~~~lg~~~~--~V~~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVS--------KIARLLRIKSR--VITSL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHH--------HHHHHcCCCCc--eeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 99999887765442 12333444333 34455 36899999999999873 3888887755544 38899
Q ss_pred HHHHHHHHHhC---CEEEEechhhcccccccccCCCCC---cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc
Q 010008 260 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 260 ~~i~~ia~~~g---~~li~D~Ah~~gli~~~~~~~p~~---~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~ 332 (520)
++|+++|+++| +++++|+||+.+.+.......++. ++|.+++|+||++.+|.| |+++++++ ....+.
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~ 253 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS 253 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence 99999999998 699999998877664321111222 699999999999988998 99999983 333321
Q ss_pred c------cCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCC
Q 010008 333 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 406 (520)
Q Consensus 333 ~------~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g 406 (520)
. ..-+...|+.+...+++++.+|+.+...++++..++..++++++.+.|.+.|++++... ....+.++..
T Consensus 254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p---~~~~v~f~~~- 329 (380)
T PRK02769 254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNP---NSITVVFPCP- 329 (380)
T ss_pred cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CceEEEEcCC-
Confidence 1 01123467877778888999999888788899999999999999999998999987642 2233334432
Q ss_pred CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 407 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 407 ~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+ +.+ . .|..++. .+..+||....- .+.+.++.+.+-+...+.
T Consensus 330 -~-~~~---~--~~w~l~~----------~~~~~hi~~~~~----~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 330 -S-ERI---W--KKWHLAT----------SGNQAHIITMPH----HNKQQIDSLIDELIFDLK 371 (380)
T ss_pred -C-HHH---H--hCeeEcc----------cCCEEEEEECCC----CCHHHHHHHHHHHHHHHh
Confidence 2 222 1 4554432 134788854322 345677766666655554
No 149
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.89 E-value=6e-21 Score=197.72 Aligned_cols=316 Identities=18% Similarity=0.208 Sum_probs=215.0
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccc
Q 010008 127 GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKR 206 (520)
Q Consensus 127 ~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~ 206 (520)
|..-|+|.+...++| +.++++||.++ -|.++||+.|+.++....++|||+| +++.+-. +...
T Consensus 63 GDe~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~-------Tt~a 124 (450)
T TIGR02618 63 GDEAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFT-------TTRY 124 (450)
T ss_pred cchhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHH-------HHHH
Confidence 334477778788998 67888999986 3667899999777666679999988 4443311 1111
Q ss_pred ccccccceEEEEEcccC---------CCCCCCCHHHHHHHhhhc---CCcEEEEcCCCC---CCC---CCHHHHHHHHHH
Q 010008 207 RVSGTSIYFESMPYRLD---------ESTGLVDYDMLEKTAILF---RPKLIIAGASAY---PRD---FDYPRMRQIADA 268 (520)
Q Consensus 207 ~v~~~g~~~~~v~~~~d---------~~~~~iD~d~le~~i~~~---~pklIi~~~s~~---p~~---~d~~~i~~ia~~ 268 (520)
.+...|. .++.++.+ +.++.+|+++|++++++. ++++|.+..++| +.+ .+++++.++|++
T Consensus 125 hIe~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~ 202 (450)
T TIGR02618 125 HQEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEA 202 (450)
T ss_pred HHHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHH
Confidence 1334454 33333222 456899999999999863 233554443333 224 468999999999
Q ss_pred hCCEEEEechhhccccc------ccccCCC--------CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhccc
Q 010008 269 VGALLMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 334 (520)
Q Consensus 269 ~g~~li~D~Ah~~gli~------~~~~~~p--------~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~ 334 (520)
+|+.|+.|+||..|--+ .+....+ +.++|.+++|+||...+|-||+|.++++ ++.++++..
T Consensus 203 ~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~~ 277 (450)
T TIGR02618 203 HGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKEL 277 (450)
T ss_pred cCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHHH
Confidence 99999999999885311 1222222 3489999999999999999999998886 777776654
Q ss_pred --CCCCC--CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC--CC-
Q 010008 335 --VFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM--GI- 407 (520)
Q Consensus 335 --~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~--g~- 407 (520)
.+.|+ .|+.....+.|++++|++... ..|.++...++++|++.|.+.|++++.+ +..|.+++|.... .+
T Consensus 278 ~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~p-~ggh~V~vda~~~lph~~ 353 (450)
T TIGR02618 278 VVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVEP-VGGHAVFLDARRFLPHIP 353 (450)
T ss_pred hhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccCC-CCcceEEEEhHHhCCCCC
Confidence 34443 344344578888999988764 3677888888999999999999999764 4569899987532 12
Q ss_pred ----CHHH-HHHHHhhcCeEEc-CCCC-----CCCCCCCC--CCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 408 ----DGAR-VEKILDMASITLN-KNSV-----PGDKSALV--PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 408 ----~~~~-~~~~L~~~gI~v~-~~~~-----Pg~~~~~~--~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
.+.. +..+..+.||... .+++ |....... -.-+|+..| +|-.|.+.|+++++.+..+.++...+
T Consensus 354 ~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaip---rr~yt~~h~~~v~~~~~~~~~~~~~~ 430 (450)
T TIGR02618 354 QDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIP---RRVYTYAHMDVVADGIIKLYKHRDDI 430 (450)
T ss_pred hhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccc---cccccHhHHHHHHHHHHHHHhhHhhc
Confidence 2333 3444567887642 2222 21111111 245899755 56789999999999999999876544
No 150
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-21 Score=201.49 Aligned_cols=277 Identities=16% Similarity=0.120 Sum_probs=186.6
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 145 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 145 ~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
++++++.+|++++ +|.+++|+ +++..++.++++|| |+|++++|+|+.+. ......|. +++.+++
T Consensus 63 ~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~--------~~~~~~G~--~~~~v~~ 128 (351)
T PRK01688 63 IENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--------VSAETIGV--EIRTVPT 128 (351)
T ss_pred HHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH--------HHHHHcCC--EEEEeec
Confidence 3678888999986 67779998 89999999999997 99999998764321 12344565 5666666
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC-ccc
Q 010008 223 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCD 297 (520)
Q Consensus 223 d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~-~aD 297 (520)
+ +++.+|++++++++ + ++|+|++++|+||+ .++.+++.++++.. +++||+|+++ ..+.........+. +..
T Consensus 129 ~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay-~~f~~~~s~~~~~~~~~n 204 (351)
T PRK01688 129 L-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAY-IEFCPQASLAGWLAEYPH 204 (351)
T ss_pred C-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch-hhcCCCCChHHHHhhCCC
Confidence 6 35889999999887 4 79999999999997 77777777776543 6899999995 33331110000011 223
Q ss_pred -EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 010008 298 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 374 (520)
Q Consensus 298 -iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na 374 (520)
+++.|++|++ +|.|.|++++++ ++.+.+.+...+...+ ...+.+|. .+|.......+++..+++.+++
T Consensus 205 ~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~~~~~~v~--~~~~~~a~-~~L~~~~~~~~~~~~~~~~~~r 275 (351)
T PRK01688 205 LVILRTLSKAFALAGLRCGFTLANE------EVINLLLKVIAPYPLS--TPVADIAA-QALSPQGIAAMRERVAEINANR 275 (351)
T ss_pred EEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhccCCCCCC--HHHHHHHH-HHHhcchHHHHHHHHHHHHHHH
Confidence 7889999976 688899999987 6777776554332211 22222222 2343210122356677788888
Q ss_pred HHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 375 RALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 375 ~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
+.+.+.|.+. |+..+.+ +..+++++++. +.+++.+.|.+.||.+.... ..+..++++||++. +
T Consensus 276 ~~l~~~L~~~~~~~~~~p-s~~nfi~~~~~----~~~~l~~~L~~~gi~vr~~~----~~~~~~~~iRis~~-------~ 339 (351)
T PRK01688 276 QWLIAALKEIPCVEQVFD-SETNYILARFT----ASSAVFKSLWDQGIILRDQN----KQPGLSNCLRITIG-------T 339 (351)
T ss_pred HHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEEECC----CcCCCCCeEEEeCC-------C
Confidence 9999999885 6643333 23456777763 46778888889999996431 11113578999864 3
Q ss_pred HHHHHHHHHHH
Q 010008 454 EKEFVAIADFI 464 (520)
Q Consensus 454 ~~d~~~la~~i 464 (520)
++|++++.+.|
T Consensus 340 ~~e~~~l~~al 350 (351)
T PRK01688 340 REECQRVIDAL 350 (351)
T ss_pred HHHHHHHHHhh
Confidence 68999998876
No 151
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=9.9e-21 Score=194.34 Aligned_cols=327 Identities=22% Similarity=0.253 Sum_probs=225.9
Q ss_pred ceEecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 010008 96 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 170 (520)
Q Consensus 96 i~Liasen~~----~~~V~ea~~s~l~~~y~~G~p~~ry-y~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~ 170 (520)
+++ .|.||. +|.+++++...+. +|.-|..+.|. +|..+...+|| +.+++++|.+.. +..+||-.
T Consensus 42 ~nf-~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~a-----l~f~SGy~ 110 (388)
T COG0156 42 LNF-CSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELE----EELADFLGAEAA-----LLFSSGFV 110 (388)
T ss_pred Eee-eccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCcE-----EEEcccch
Confidence 444 366664 6889999887765 45557778884 44455556788 689999999863 55689999
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKL 245 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pkl 245 (520)
||..++.+|+++||.|+.-.+.|-+.+. .+..++. +.+.|. ..|+++||+.+++. ++++
T Consensus 111 AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a--~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 111 ANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRA--EVRRFK------HNDLDHLEALLEEARENGARRKL 174 (388)
T ss_pred hHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCC--cEEEec------CCCHHHHHHHHHhhhccCCCceE
Confidence 9999999999999999988876644321 2344454 444543 25889999998762 1456
Q ss_pred EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEechhhccccccc---cc-CCCCC--cccEEEeccCcccCCCCceEEEe
Q 010008 246 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-ADPFK--YCDVVTTTTHKSLRGPRGGMIFF 317 (520)
Q Consensus 246 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~---~~-~~p~~--~aDiv~~S~hK~l~GprgG~I~~ 317 (520)
|++. +|..+...|+++|+++|++||++|++|+||..|..... .. .-.+. ..||+++|++|.|+ --||++.+
T Consensus 175 IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlG-s~Gg~v~g 253 (388)
T COG0156 175 IVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALG-SSGGYIAG 253 (388)
T ss_pred EEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhc-ccCceeeC
Confidence 6665 67777799999999999999999999999999987531 11 11111 35899999999985 67899999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCCh-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 396 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~-~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~ 396 (520)
+. .+.+.+.....|.+.++.. ....++...+++.+. +..+..+++.++...+...+...|+.+.. ..++
T Consensus 254 ~~------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~~--s~s~ 323 (388)
T COG0156 254 SA------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLLP--SESP 323 (388)
T ss_pred cH------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccCC--CCCC
Confidence 88 6766665444444433322 233334445677654 34667788888899888777767887643 3455
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
++.+-+.+.. ....+...|.+.||.+..-..|- -|.++..||++..+ .++++|++++++.+.++
T Consensus 324 I~pv~~gd~~-~a~~~s~~l~~~Gi~v~~i~~PT--Vp~gtarlRi~lta----~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEE-RALEASRALLEEGIYVSAIRPPT--VPKGTARLRITLTA----AHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHH-HHHHHHHHHHHCCeeEeeecCCC--CCCCcceEEEEecC----CCCHHHHHHHHHHHHhh
Confidence 5544443221 23455566666699997543332 23456889998765 46799999999998764
No 152
>PLN02672 methionine S-methyltransferase
Probab=99.89 E-value=7.7e-21 Score=215.04 Aligned_cols=332 Identities=13% Similarity=0.108 Sum_probs=215.4
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhcc-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~-y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
+.|.|..+||+ +|+.|++++...+... ++.|+| .+.+..++++++.+|++.+.. -+|.+++|+
T Consensus 698 ~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~p------------dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 698 SLIHMDVDESFLPVPSAVKASIFESFVRQNISESET------------DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCCh------------HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 56899988875 6899999998766431 111222 123345578999999976411 146678898
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEE
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 248 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~ 248 (520)
+++..++.++++|||.|++++|.|+.+. ..+.+.|. +++.++++++ ++.+|+++++++++..+.++|++
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~--------~~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYV--------SAAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHH--------HHHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 7777888999999999999999876543 23445565 6667777643 57899999999987633456777
Q ss_pred cCCC-CCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-------c-----ccEEEeccCccc-
Q 010008 249 GASA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-------Y-----CDVVTTTTHKSL- 307 (520)
Q Consensus 249 ~~s~-~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-------~-----aDiv~~S~hK~l- 307 (520)
+.|+ ||+ .+ .+++|.++|+++|++||+|++ |.++.+.+... .++. . .-+++.|++|.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEa-YsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTS-FSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCC-CCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 7776 887 34 577888889999999999999 45555533211 0110 1 115678999864
Q ss_pred -CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHh--cCc----hhHHHHHHHHHHHHHHHHH
Q 010008 308 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSP----EFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 308 -~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~--~~~----~~~~~~~~i~~na~~l~~~ 380 (520)
+|+|.||++++++ ++.+.+.... ...+.....+.++.+ ++... ... ..+++.+.+.++++.+.+.
T Consensus 914 lpGLRIGylIap~~-----eLi~~l~~~~--~~s~~~~~~q~Aaaa-alall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~ 985 (1082)
T PLN02672 914 SGGHEFGFLALNDS-----VLIDAFHSAP--GLSRPHSTLKYTIKK-LLGLKNQKSSDLLDGVAEQKKILKSRAERLKET 985 (1082)
T ss_pred cHHHHheeEEeCCH-----HHHHHHHHhh--hhcCCCcHHHHHHHH-HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999763 4666665421 111111223333221 22111 111 2355667788999999999
Q ss_pred HHHCCCEEecCCCCCeeEEEEecC----------------CCCCHHHHHH-HHhhcCeEEcCCCCCCCCCCCCCCEEEEc
Q 010008 381 LVELGYKLVSGGSDNHLVLVDLRP----------------MGIDGARVEK-ILDMASITLNKNSVPGDKSALVPGGIRIG 443 (520)
Q Consensus 381 L~~~G~~v~~~gt~~~~~~vd~~~----------------~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~~~~~~~giRig 443 (520)
|.+.|+.+..+ ..+.++|+++.. .+++..++.+ +++++||.++ ||... ..++++||+
T Consensus 986 L~~~Gi~v~~P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~----PGs~F-G~~g~~RIs 1059 (1082)
T PLN02672 986 LEACGWDVLEP-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCIN----SSSWT-GIPGYCRFS 1059 (1082)
T ss_pred HHHCCCeEecC-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEe----cCccc-CCCCeEEEE
Confidence 99989887654 235666766531 0245555555 4456799995 44321 125789998
Q ss_pred cCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 444 SPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 444 ~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.. ..++++++..+.|.+...
T Consensus 1060 fa------~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1060 FA------LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ec------CCHHHHHHHHHHHHHHHH
Confidence 64 346788888888876544
No 153
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=1.3e-20 Score=195.49 Aligned_cols=316 Identities=13% Similarity=0.106 Sum_probs=205.8
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +|+.+++++...+.. ..+||.. . ...+. +.+++.++++++ +|.+++|+ +
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~------~-~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP------D-YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc------C-HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45888888875 678899998776653 2234431 1 12333 456666788886 56779998 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEE
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~----~iD~d~le~~i~~~~pklI 246 (520)
++..++.++. +||+|++++|.|.++. ..+...|. +++.++++.+++ ..|++++++.. . +++++
T Consensus 86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 152 (360)
T PRK07392 86 LLTWAGRELA-QLRAVYLITPAFGDYR--------RALRAFGA--TVKELPLPLDQPSPGLTLRLQTLPPQL-T-PNDGL 152 (360)
T ss_pred HHHHHHHHhC-CCCeEEEECCCcHHHH--------HHHHHcCC--eEEEEecccccCCcccccCHHHHHHhc-c-CCCEE
Confidence 8888888765 7899999999876542 13344565 666666664433 25677776543 3 68999
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-cc-cEEEeccCccc--CCCCceEEEe
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKSL--RGPRGGMIFF 317 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~a-Div~~S~hK~l--~GprgG~I~~ 317 (520)
+++.|+||+ .++.++|.++|+++++ +|+|++ |..+...+..++.+ . +. -+++.|++|++ +|.|.||+++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~-y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEA-FMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECc-hhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 999999998 7789999999999985 666998 44555433222211 1 11 27789999976 7999999999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCC
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 395 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~ 395 (520)
++ ++.+++.....+ .+. +.....++..+++ ...+ +...+.+.++++.+.+.|++. |+.+..+ ..
T Consensus 231 ~~------~~~~~~~~~~~~--~~~-s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~~ 296 (360)
T PRK07392 231 HP------DRLQRWQQWRDP--WPV-NGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPS--AA 296 (360)
T ss_pred CH------HHHHHHHhhCCC--CCC-CHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC--CC
Confidence 87 566666543322 122 2223333333443 2334 444566777888899999874 7776543 34
Q ss_pred eeEEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+++|+++.. +..++.+ +|+++||.+. ||.. +...++++||++.. .++++++.+.+++++.
T Consensus 297 ~fl~~~~~~---~~~~l~~~ll~~~gv~v~----pg~~f~~~~~~~iRi~~~~-------~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 297 NFLLVQSQG---SALQLQEKLLQQHRILIR----DCLSFPELGDRYFRVAVRT-------EAENQRLLEALAAILA 358 (360)
T ss_pred CEEEEEcCC---CHHHHHHHHHhhCCEEEE----eCCCCCCCCCCEEEEEeCC-------HHHHHHHHHHHHHHhh
Confidence 566777642 4455554 4678999995 4443 22235799998642 4678888888887664
No 154
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.1e-20 Score=186.02 Aligned_cols=332 Identities=18% Similarity=0.128 Sum_probs=221.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCC-C-ceeeecCChH-HHHHHHHHhhC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-W-GVNVQPLSGS-PANFEVYTAIL 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~-~-~~~V~~~sGs-~A~~~~l~all 180 (520)
.+++.+.+|+...+...-..||... .|- . .||+.++++.+-+.+. . .-.|..|+|. +|+..++.+|.
T Consensus 78 ~ts~~a~~Av~~al~Sgk~N~Yaps---~G~---~----~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA 147 (447)
T KOG0259|consen 78 RTSQEAEQAVVDALRSGKGNGYAPS---VGI---L----PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA 147 (447)
T ss_pred cCCHHHHHHHHHHHhcCCCCCcCCc---ccc---H----HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc
Confidence 4788888888777665444455221 111 1 2445555553332110 0 0246678887 99999999999
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF 257 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~ 257 (520)
+||-.||++.|.+. .+.......+ .++.+|++-++ ++.||++.+|.++.+ +|.+|++..|+||. +.
T Consensus 148 ~p~aNILlPrPGfp--------~Y~~~a~~~~--lEVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVy 216 (447)
T KOG0259|consen 148 NPGANILLPRPGFP--------LYDTRAIYSG--LEVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVY 216 (447)
T ss_pred CCCCceecCCCCCc--------hHHHhhhhcC--ceeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCcccc
Confidence 99999999988543 2221223344 47777877665 589999999999998 99999999999985 44
Q ss_pred C---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-c---cc-EEEeccCc-cc-CCCCceEEEeeCCCcchh--
Q 010008 258 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y---CD-VVTTTTHK-SL-RGPRGGMIFFKKDPVLGV-- 325 (520)
Q Consensus 258 d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~---aD-iv~~S~hK-~l-~GprgG~I~~~~~~~~~~-- 325 (520)
. +++|+++|+++|+.+|+|+. |-.+++.+....|+. . +- +.+++.+| |+ +|||.|||+.++..+...
T Consensus 217 s~~HL~kiae~A~klgi~vIaDEV-Y~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~ 295 (447)
T KOG0259|consen 217 SEDHLKKIAETAKKLGIMVIADEV-YGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDT 295 (447)
T ss_pred cHHHHHHHHHHHHHhCCeEEehhh-cceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccch
Confidence 3 77899999999999999998 445565554333432 1 22 55689999 55 999999999998643211
Q ss_pred hHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEecC
Q 010008 326 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP 404 (520)
Q Consensus 326 ~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~~ 404 (520)
...+.+.. +-....+|.....+|+-.-|+..-++.|+....-++.|++..++.|++ .++.+........+.++.+..
T Consensus 296 ~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~ 373 (447)
T KOG0259|consen 296 KVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNL 373 (447)
T ss_pred HHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccch
Confidence 11122221 112234566666777776677655444687888899999999999998 677744332334555654421
Q ss_pred -----CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 405 -----MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 405 -----~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
..-|.+.+.++..+..+.+ +||..-. .++++||... +.++.+++..++|++....
T Consensus 374 s~~~~~~dD~dFc~kL~~Eesv~~----LPG~af~-~~nw~Ri~i~------~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 374 SLFPDIEDDVDFCQKLAREESVIC----LPGQAFG-LKNWLRIVIT------VEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred hhhccccccHHHHHHHhhhcceEE----ecccccc-CCCeEEEEEc------cChHHHHHHHHHHHHHHHh
Confidence 1224466788888999999 8887621 4789999743 4567788888888776654
No 155
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-20 Score=194.68 Aligned_cols=313 Identities=16% Similarity=0.151 Sum_probs=202.9
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +|+.+++++.+.+.. ..+||.. | ...+. +.+++.++++++ +|.+++|+ +
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~----~---~~~lr----~~ia~~~~~~~~----~I~it~G~~~ 93 (357)
T PRK14809 31 DLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPKA----S---HADLT----AALADRWDVSPE----QVWLANGGDG 93 (357)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCCC----C---HHHHH----HHHHHHhCCCcc----eEEECCCHHH
Confidence 56888888774 678899998876643 2345431 1 22333 456677899886 56678988 8
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
++..++.++++|||.|++++|.|..+. ......|. .++.++++. +++.+|.+++++.. + ++|+|+++
T Consensus 94 al~~~~~~~~~~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~~~l~~~~~~~~~~~~~~~~~-~-~~k~i~l~ 161 (357)
T PRK14809 94 ALDYLARAMLDPGDTVLVPDPGFAYYG--------MSARYHHG--EVREYPVSKADDFEQTADTVLDAY-D-GERIVYLT 161 (357)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHH--------HHHHHcCC--eEEEEecccCcCCCcCHHHHHHhh-c-CCcEEEEe
Confidence 999999999999999999999764221 12234455 444444543 34678888887765 3 68999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHh--CCEEEEechhhcccccccccCCCCC-ccc-EEEeccCccc--CCCCceEEEeeCCC
Q 010008 250 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKDP 321 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~~~p~~-~aD-iv~~S~hK~l--~GprgG~I~~~~~~ 321 (520)
+|+||+ .++.+++.++++.. +++||+|+++ ..+...+....-+. ... +++.|++|++ +|.|.||+++++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAY-GEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechh-hhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 999997 77888777777654 8899999984 34443211000011 112 6778999987 699999999987
Q ss_pred cchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEE
Q 010008 322 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 400 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~v 400 (520)
++.+++.+...+. +.+...+.+++ .+|. .++ +++..+.+.++++.+.+.|...++ .+ ...++|+
T Consensus 239 ----~~~~~~~~~~~~~--~~~~~~~~~a~-~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~--~g~f~~~ 303 (357)
T PRK14809 239 ----EWADAYARVNTPF--AASELACRAGL-AALD---DDEHVERTVETARWAREYIREELDAPTW---ES--AGNFVLA 303 (357)
T ss_pred ----HHHHHHHHhCCCC--CCCHHHHHHHH-HHhC---CHHHHHHHHHHHHHHHHHHHHHhcCccC---CC--CCCEEEE
Confidence 6777666543221 22222223322 2332 223 355666677777777777754322 22 2356677
Q ss_pred EecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++. +..++.+.|+++||.+.. |.... .+++|||+.. +.+++++..+.|.++++
T Consensus 304 ~~~----~~~~~~~~l~~~gv~v~~----g~~f~-~~~~iRls~~-------~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 304 EVG----DASAVAEAAQERGVIVRD----CTSFG-LPECIRITCG-------TREETERAVEVLNEVLA 356 (357)
T ss_pred ECC----CHHHHHHHHHHCCEEEEE----CccCC-CCCeEEEecC-------CHHHHHHHHHHHHHHhc
Confidence 663 456777888899999954 43211 2478999853 25789999888877653
No 156
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=1.5e-20 Score=194.49 Aligned_cols=314 Identities=15% Similarity=0.134 Sum_probs=206.9
Q ss_pred cceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 010008 95 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 95 ~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A 171 (520)
.++|..++|+ .|+.+.+++...+.. ..+||.. . ..++ ++.++++++++++ +|.+++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~------~-~~~l----r~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPDP------D-YLEL----RKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc------c-HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 5788888775 578999998876542 1234431 1 2333 3567778899886 66779998 88
Q ss_pred HHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 172 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
+..++.++ .+ |+|++++|.|+.+.. .....|. +++.++++.+ ++.+| +++.+.+.. ++++|+++.
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDA--EIEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCC--eeEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 88888876 44 689999998764421 2233454 5666666543 35789 666666665 799998889
Q ss_pred CCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC---ccc--EEEeccCccc--CCCCceEEEee
Q 010008 251 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCD--VVTTTTHKSL--RGPRGGMIFFK 318 (520)
Q Consensus 251 s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~---~aD--iv~~S~hK~l--~GprgG~I~~~ 318 (520)
|+||+ ..+ +++|.++|+++|+++|+|++ |..+...+...+++. ..+ +++.|++|++ +|.|.||++++
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~-Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEA-FMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCc-ccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 99997 444 77888889999999999998 455554432222221 112 7789999986 79999999986
Q ss_pred CCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCe
Q 010008 319 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 396 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~ 396 (520)
++ .+.+.+.....+. +.....+. +...++. ...+ ++..+.+.++++.+.+.|.+. |+.+..++ ..
T Consensus 229 ~~-----~~~~~~~~~~~~~--~~~~~~q~-~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~--g~ 295 (354)
T PRK06358 229 NK-----NLAEKLLQMREPW--SINTFADL-AGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS--VN 295 (354)
T ss_pred CH-----HHHHHHHHhCCCC--cchHHHHH-HHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc--ce
Confidence 43 5666665433221 11112222 2222332 2233 666778888899999999874 76665542 34
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
++|+.+. +..++.+.|.++||.+. ||+. +...+++|||++. +.++++++.+.+++++
T Consensus 296 f~~~~~~----~~~~~~~~l~~~gI~v~----~~~~f~~~~~~~iRls~~-------~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 296 FIFFKLE----KPIDLRKELLKKGILIR----SCSNYRGLDENYYRVAVK-------SREDNKKLLKALEVIL 353 (354)
T ss_pred EEEEEcC----chHHHHHHHHHCCeEEE----ECCCCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHHh
Confidence 6677664 23667777778999994 4443 2224578999864 2689999999998765
No 157
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=1.5e-20 Score=195.88 Aligned_cols=323 Identities=15% Similarity=0.143 Sum_probs=200.0
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sGs 169 (520)
..|+|..+++ .+++.+.+++...... ...|+.. .| ..++.+...+++++.+|. +++ +|.+++|+
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~---~G---~~~lr~aia~~l~~~~g~~~~~~----~I~it~G~ 92 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKS---AG---EESLREAQRGFFKRRFKIELKEN----ELIPTFGT 92 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCcc----eEEEecCc
Confidence 5577877775 3678888888765421 2234331 12 234555555778888784 554 77889998
Q ss_pred -HHHHHHHHhhC--CCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCC-CCCCCHHHHHHHhhhcCCcE
Q 010008 170 -PANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 170 -~A~~~~l~all--~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~-~~~iD~d~le~~i~~~~pkl 245 (520)
+|+..++.+++ ++||.|++++|.|..+.. .....|. ++++++++++ .+.+|.++.+ + + ++|+
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~~~--~-~-~~k~ 158 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSLNEKE--L-Q-EVDL 158 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCcchhh--h-c-cccE
Confidence 78877777764 589999999997765421 2334554 6777777643 3566665432 2 3 6999
Q ss_pred EEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC---------ccc-EEEeccCcc--cC
Q 010008 246 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---------YCD-VVTTTTHKS--LR 308 (520)
Q Consensus 246 Ii~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~---------~aD-iv~~S~hK~--l~ 308 (520)
|+++.|+||+ .+ .+++|.++|+++|++||+|+++ ..+...+..++.+. +.. +++.|++|+ ++
T Consensus 159 v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y-~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 159 VILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECY-SEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccch-hhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 9999999997 44 4667778889999999999984 34432221221110 112 778999996 48
Q ss_pred CCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEE
Q 010008 309 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 388 (520)
Q Consensus 309 GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v 388 (520)
|.|.||+++++ ++.+++.........+.+...+.++. .++.. ....+...+++.++++.+.+.| |+.
T Consensus 238 GlRiG~ii~~~------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~- 304 (374)
T PRK05839 238 GLRSGFIAGDA------SILKKYKAYRTYLGCASPLPLQKAAA-VAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT- 304 (374)
T ss_pred cceeEEEecCH------HHHHHHHHHHhhcCCCCChHHHHHHH-HHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC-
Confidence 99999999986 66666544321111233333333332 23321 2233566777777777766655 443
Q ss_pred ecCCCCCeeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 389 VSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 389 ~~~gt~~~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.. ..+.++|+++. +..++.+.| +++||.+..+...+. ....++++||++. .+++++++..+.|.++
T Consensus 305 ~p--~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~-~~~~~~~iRis~~------~~~~~~~~~l~~l~~~ 371 (374)
T PRK05839 305 IP--PATFYVWLPVD----NDEEFTKKLYQNEGIKVLPGSFLGR-NGIGKGYVRIALV------YDTPKLEKALEIIKTY 371 (374)
T ss_pred CC--CeeEEEEEeCC----ChHHHHHHHHHHCCEEEeCchhhCC-CCCCCCeEEEEec------CCHHHHHHHHHHHHHH
Confidence 22 23566787774 234554555 569999943321111 1113589999974 2378888888888876
Q ss_pred HH
Q 010008 468 VE 469 (520)
Q Consensus 468 l~ 469 (520)
+.
T Consensus 372 l~ 373 (374)
T PRK05839 372 LE 373 (374)
T ss_pred hh
Confidence 64
No 158
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.88 E-value=6.4e-20 Score=193.10 Aligned_cols=338 Identities=11% Similarity=0.026 Sum_probs=219.5
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC-C-CCCceeeecCChHHHHHHHHHhhC
Q 010008 103 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAIL 180 (520)
Q Consensus 103 n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~-~-~~~~~~V~~~sGs~A~~~~l~all 180 (520)
.++.|.+.+++.+.+...+ |.|.. .|. ..++|+.+++++++++|++ + +++.. +.+++||+||+.++.+..
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~--~~~le~~~~~~la~llg~~~~~~~~~g-~~TsGgTEAn~~al~~ar 122 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---YPQ--TAEIENRCVNMLADLWHAPAKDAEAVG-TSTIGSSEAIMLGGLAMK 122 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---Ccc--HHHHHHHHHHHHHHHhCCCCCCCCCeE-EEechHHHHHHHHHHHHH
Confidence 4667889999988886433 44432 122 2388889999999999998 3 34422 223556699998876542
Q ss_pred --------CCC-----CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEE
Q 010008 181 --------KPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 247 (520)
Q Consensus 181 --------~pG-----D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi 247 (520)
+.| -+|++.+.+|.+.. +.....|. ++..+++|++++.+|+++|++++++ +|.+|+
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~--~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV~ 191 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDV--ELREVPMDPGRYVIDPEQVVEAVDE-NTIGVV 191 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCc--eeEEEecCCCceeeCHHHHHHHHhh-CCeEEE
Confidence 112 25777766554322 12333453 5566667753468999999999988 788888
Q ss_pred EcCCCCC--CCCCHHHHHHHHHHh------CCEEEEechhhcccccc--cccCCC--CCcccEEEeccCcccCCCCc-eE
Q 010008 248 AGASAYP--RDFDYPRMRQIADAV------GALLMMDMAHISGLVAA--SVVADP--FKYCDVVTTTTHKSLRGPRG-GM 314 (520)
Q Consensus 248 ~~~s~~p--~~~d~~~i~~ia~~~------g~~li~D~Ah~~gli~~--~~~~~p--~~~aDiv~~S~hK~l~Gprg-G~ 314 (520)
+...++. ...|+++|+++|+++ |+++++|+|+..+.... +..+.. ..++|.++.|.|||+.||.| |+
T Consensus 192 ~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~ 271 (431)
T TIGR01788 192 CILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVGW 271 (431)
T ss_pred EEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcEE
Confidence 8754443 388999999999999 99999999987554321 112222 23799999999999889998 99
Q ss_pred EEeeCCCcchhhHHHhhccc--------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-C
Q 010008 315 IFFKKDPVLGVELESAINNA--------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G 385 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~--------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G 385 (520)
++++++. .+...+... ....+.++......+++...|..+...++.+..++..++++++.+.|.+. +
T Consensus 272 l~~r~~~----~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~ 347 (431)
T TIGR01788 272 VIWRDEE----ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGP 347 (431)
T ss_pred EEEeChH----HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9998741 121222110 00122333333333445556666656688999999999999999999884 6
Q ss_pred CEEecCCCCCeeEEEEecCC---CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 386 YKLVSGGSDNHLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 386 ~~v~~~gt~~~~~~vd~~~~---g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
++++.+....+++.+.+.+. +++..++.+.|.+.|+.+.....|... .....+|+.+... .+.+-++.+.+
T Consensus 348 ~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~--~~~~~lR~~~~~~----~~~~~~~~~~~ 421 (431)
T TIGR01788 348 FEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNA--EDIVVMRIVVREG----FSRDLAELLIE 421 (431)
T ss_pred EEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCcc--CCeEEEEEEecCC----CCHHHHHHHHH
Confidence 88886522334444444321 355677889999999987544333110 1123589876433 34567777777
Q ss_pred HHHHHHH
Q 010008 463 FIHEGVE 469 (520)
Q Consensus 463 ~i~~~l~ 469 (520)
.|..++.
T Consensus 422 ~~~~~~~ 428 (431)
T TIGR01788 422 DIEAALA 428 (431)
T ss_pred HHHHHHH
Confidence 7777664
No 159
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=2.2e-20 Score=199.32 Aligned_cols=289 Identities=16% Similarity=0.144 Sum_probs=190.7
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 221 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~ 221 (520)
.++++++++|++.+ ++.+++|+ +++.+++.++ .++||+|+++++.|+++..... ......|. +++.++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~--~~~~v~ 186 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGI--EVVEVP 186 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCc--EEEEec
Confidence 34678999999875 55556766 7777888887 4899999999987755431110 00111343 666777
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEE--echhhcccccccccCCCCC-ccc
Q 010008 222 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD 297 (520)
Q Consensus 222 ~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~--D~Ah~~gli~~~~~~~p~~-~aD 297 (520)
+++ + .+|++++++++++ ++++|+++++++.+ ..|+++|+++|+++|+++++ |.. ..|.+ ..+-. ++|
T Consensus 187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~D 257 (447)
T PRK00451 187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGAD 257 (447)
T ss_pred CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCCC
Confidence 764 4 8999999999987 89999998775433 77999999999999999998 533 33332 12222 689
Q ss_pred EEEeccCcc-----cCCCCceEEEeeCCCcchhhHHHhhc----------------------------ccCCCCCCCCCh
Q 010008 298 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAIN----------------------------NAVFPGLQGGPH 344 (520)
Q Consensus 298 iv~~S~hK~-----l~GprgG~I~~~~~~~~~~~l~~~i~----------------------------~~~~p~~~g~p~ 344 (520)
++++|.||+ ++||+.|++++++ ++.+.+. +.......+++.
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRK------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQ 331 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhH------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccH
Confidence 999999986 6899889999887 3444321 000000111111
Q ss_pred HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEE
Q 010008 345 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITL 423 (520)
Q Consensus 345 ~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v 423 (520)
.....+.+.+++.+...++++..+++.++++++.+.|.+. |+++.. +...+.+.+++. .+..++.+.|.+.||.+
T Consensus 332 ~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~ 407 (447)
T PRK00451 332 ALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRLP---KPAEEVNEALLEKGILG 407 (447)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEecC---CCHHHHHHHHHhcCCCC
Confidence 1111122224554545567888899999999999999885 687763 221122234442 35678888898888885
Q ss_pred cCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 424 NKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 424 ~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.. |+.. .+..++.+|++.+.+++ ++|++++++.|++++
T Consensus 408 ~~---~~~~~~~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 408 GY---DLGRYYPELGNHLLVCVTEKRT----KEDIDALVAALGEVL 446 (447)
T ss_pred Cc---ccccccCCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 42 2222 11124689999876665 799999999998653
No 160
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=2.3e-20 Score=192.67 Aligned_cols=314 Identities=16% Similarity=0.174 Sum_probs=207.5
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 169 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs- 169 (520)
.+.++|..++|+ +|+.+++++...+.+. .+||.. .| ...+ ++.+++.+|++++ +|.+++|+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g---~~~l----r~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---ED---ERRA----RAAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cc---hHHH----HHHHHHHhCcChh----hEEECCCHH
Confidence 367889888874 6888999998776432 234431 12 2233 3667778899876 56678888
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+|+..++. ++|| .+++..|.+.... ..+...|. +++.++++. ++.+|.+.+ ++ ++|+++++
T Consensus 86 ~al~~~~~--l~~~-~viv~~P~y~~~~--------~~~~~~G~--~i~~v~~~~-~~~~d~~~l----~~-~~~~i~l~ 146 (349)
T PRK07908 86 EGFALLAR--LRPR-RAAVVHPSFTEPE--------AALRAAGI--PVHRVVLDP-PFRLDPAAV----PD-DADLVVIG 146 (349)
T ss_pred HHHHHHHh--cCCC-eEEEeCCCChHHH--------HHHHHcCC--EEEeeccCc-ccCcChhHh----cc-CCCEEEEc
Confidence 88887776 5775 4556777664432 12334555 677777764 377888855 33 78999999
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC--Cccc-EEEeccCccc--CCCCceEEEeeCCCc
Q 010008 250 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--KYCD-VVTTTTHKSL--RGPRGGMIFFKKDPV 322 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~--~~aD-iv~~S~hK~l--~GprgG~I~~~~~~~ 322 (520)
+++||+ .++.++|.++|++ +.++|+|+++. .++. +..++.. ...+ +++.|+||++ +|+|.||++.++
T Consensus 147 np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--- 220 (349)
T PRK07908 147 NPTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP--- 220 (349)
T ss_pred CCCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH---
Confidence 999997 7889999999964 88999999854 3332 2111111 1223 6677999975 789999999887
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEe
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 402 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~ 402 (520)
++.+.+.........+ ....+++...++......+++..+++.++++.+.+.|.+.|+++..+ ....++|+++
T Consensus 221 ---~~~~~~~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~ 293 (349)
T PRK07908 221 ---DVLARLTRGRAHWPVG---TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRV 293 (349)
T ss_pred ---HHHHHHHhcCCCCCcc---HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEEC
Confidence 6777665543222122 22333332222211112335667778888889999998888877653 2356678776
Q ss_pred cCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 403 RPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 403 ~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
. +.+++.+.|+++||.+. ||+. +...+++|||++. +++|++++.+.|++++.
T Consensus 294 ~----~~~~~~~~l~~~gI~v~----~g~~f~~~~~~~vRis~~-------~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 294 P----DAELLRKRLRERGIAVR----RGDTFPGLDPDYLRLAVR-------PRAEVPVLVQALAEILK 346 (349)
T ss_pred C----cHHHHHHHHHhCCEEEE----ECCCCCCCCCCeEEEEeC-------CCccHHHHHHHHHHHHh
Confidence 4 25778889999999995 4433 1223679999973 36899999999988764
No 161
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.6e-20 Score=194.46 Aligned_cols=336 Identities=18% Similarity=0.133 Sum_probs=210.4
Q ss_pred cceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceeeecCChH-
Q 010008 95 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS- 169 (520)
Q Consensus 95 ~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V~~~sGs- 169 (520)
.++|..+.. +.++.+.+++...+.+.... ..+ |+.......+++...+++.+.++. +++ +|.+++|+
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~---~~~-y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~ 106 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEEDPG---LHG-YMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGAA 106 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCCcC---ccc-CCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCChH
Confidence 467755443 35688999988766532110 011 222222345554455566655544 454 55667777
Q ss_pred HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 170 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 170 ~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+++..++.++++|||.|++++|.+.++.. .....|. +++.++++++++.+|++++++++++ ++++|+++
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~~~ 175 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVIIN 175 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEEEe
Confidence 89999999999999999999987765421 1233454 6677777765678999999999977 89999998
Q ss_pred CCCCCC--CCC---HHHHHHHHHH------hCCEEEEechhhccccccccc-CCCCC--cccEEEeccCccc--CCCCce
Q 010008 250 ASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGG 313 (520)
Q Consensus 250 ~s~~p~--~~d---~~~i~~ia~~------~g~~li~D~Ah~~gli~~~~~-~~p~~--~aDiv~~S~hK~l--~GprgG 313 (520)
.++||+ ..+ +++|.++|++ ||+++++|++ |..+...+.. +..+. ...++++|++|.+ +|.|.|
T Consensus 176 ~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 176 SPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEP-YREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecc-ccccccCCCCCCChHHccCcEEEEecchhhccCcceeeE
Confidence 889987 444 6677778888 8999999998 4455543311 11111 2348889999987 578899
Q ss_pred EEEeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCC
Q 010008 314 MIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 392 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g 392 (520)
|++++++......+...+.... ..+....+.. ...+++..+. .. ...+.+.++++.+.+.|.+.|+.+..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~----~~--~~~~~~~~~r~~l~~~L~~~g~~~~~~~ 327 (394)
T PRK06836 255 YIAVNPEMEDADDLVAALVFANRILGFVNAPAL-MQRVVAKCLD----AT--VDVSIYKRNRDLLYDGLTELGFECVKPQ 327 (394)
T ss_pred EEecCHHHhhhHHHHHHHHHHhhccccccCCHH-HHHHHHHHhC----Ch--HHHHHHHHHHHHHHHHHHhCCCEeecCC
Confidence 9999863100000111111100 0011122222 2222222222 11 1245566778888899988888766542
Q ss_pred CCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 393 SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 393 t~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+.++|+.+.. .+..++.+.|.+.||.+. ||... ..++++||++. .+++++++..+.|.++++..
T Consensus 328 -gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~----~g~~f-~~~~~iRi~~~------~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 328 -GAFYLFPKSPE--EDDVAFCEKAKKHNLLLV----PGSGF-GCPGYFRLSYC------VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -ceEEEEEeCCC--CCHHHHHHHHHhCCEEEE----Cchhc-CCCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Confidence 34556666542 366777788899999994 44321 13578999874 24789999999998887643
No 162
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=9.9e-21 Score=195.86 Aligned_cols=333 Identities=13% Similarity=0.078 Sum_probs=220.7
Q ss_pred cceEecCCCCChHHHHHHHhhhhhccCCC--CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 010008 95 SLELIASENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 172 (520)
Q Consensus 95 ~i~Liasen~~~~~V~ea~~s~l~~~y~~--G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~ 172 (520)
.+.++++...+|+.|++||...+.+..+. |.+.. .....++.+.++ .++++++++||.+.+ +.+-+...||+.|+
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~-~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEI-SHRSKEFEAVAE-EAEADLRELLNIPDN-YKVLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCcccccc-CCCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEEcCCchHHH
Confidence 35678889999999999999876432111 21111 123445555555 577899999998432 22445556777999
Q ss_pred HHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHH-HhhhcCCcEEEEcCC
Q 010008 173 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGAS 251 (520)
Q Consensus 173 ~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~-~i~~~~pklIi~~~s 251 (520)
.+++..++.+||++++..... +.|.+. ......|.. . .+..++..+..+..++++ .+++ ++++|.+.+.
T Consensus 81 Ea~~~nl~~~g~~~l~i~~G~---fg~r~~---~~a~~~g~~-~--~~~~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~ 150 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVDTGS---WSKKAI---KEAKKYGEV-N--VAASSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN 150 (360)
T ss_pred HHHHHhcCCCCCeEEEEECCH---HHHHHH---HHHHHhCCc-e--EEecccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence 999999999999999887433 333321 122233431 2 222332234555555544 6666 7999988865
Q ss_pred CCCC--CC-CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhH
Q 010008 252 AYPR--DF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 327 (520)
Q Consensus 252 ~~p~--~~-d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l 327 (520)
.+++ .. |+++| +|+++++|+++++|....++ ...|++++|.||+| ||.| |+++.+++ .
T Consensus 151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~ 212 (360)
T PRK05355 151 ETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTIVIVRED------L 212 (360)
T ss_pred CCcceEecCccccc------CCCcEEEEcCccccCccCCH-----HHccEEEEeccccc-cCCceEEEEECHH------H
Confidence 5544 44 55555 89999999999888764332 23579999999987 6998 99999883 3
Q ss_pred HHhhccc-----------CCCCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHCCCE-EecC-CC
Q 010008 328 ESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYK-LVSG-GS 393 (520)
Q Consensus 328 ~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~G~~-v~~~-gt 393 (520)
.+++... ......++|+.+.+.++..||+.+... +++...++..+.++++.+.|++.|+. .+.. ..
T Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~ 292 (360)
T PRK05355 213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPED 292 (360)
T ss_pred HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhh
Confidence 3333221 001124899999999999999998877 78999999999999999999997752 2221 11
Q ss_pred CC-eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 394 DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 394 ~~-~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+ ..+.+.+. .+....++...+.+.||.+. ++.. ..+.+|+|...+++ .+|++++.++|++++.+
T Consensus 293 rs~~v~sf~~~-~~~~~~~~~~~~~~~Gi~~~----~~~~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 293 RSRMNVPFTLA-DEELDKKFLAEAKAAGLVGL----KGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR 358 (360)
T ss_pred cCCcEEEEEcC-ChHHHHHHHHHHHHCCCccc----CCCC---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 12 22333332 22222455567778999972 2321 24689999876665 89999999999997753
No 163
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.88 E-value=1.8e-20 Score=194.13 Aligned_cols=312 Identities=14% Similarity=0.109 Sum_probs=194.2
Q ss_pred ccceEecCCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC---CCCCceeeecCCh
Q 010008 94 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD---ENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Liasen--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~---~~~~~~~V~~~sG 168 (520)
..|+|..+++ ++++.+.+++..... ..+|+.. .| ..++++...+++.+.+|.+ ++ +|.+++|
T Consensus 22 ~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~---~G---~~~lr~~ia~~~~~~~~~~~~~~~----~I~it~G 88 (357)
T TIGR03539 22 GIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQT---WG---TPELREAIVDWLERRRGVPGLDPT----AVLPVIG 88 (357)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcc---cC---CHHHHHHHHHHHHHhcCCCCCCcC----eEEEccC
Confidence 4577776553 457888888865432 1234431 12 2345555557777776654 44 6777998
Q ss_pred H-HHHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 169 S-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 169 s-~A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
+ +++..++.++ ++|||.|++++|.|.++.. .+...|. +++.++ |++.+. ..++++|
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~--------~~~~l~----~~~~~~v 146 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAAD--------DPTELD----PVGPDLI 146 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEeccC--------ChhhcC----ccCccEE
Confidence 7 8888888887 7999999999998754421 2233454 444432 223222 2378999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--------cccEEEeccCccc--CCCC
Q 010008 247 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVTTTTHKSL--RGPR 311 (520)
Q Consensus 247 i~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--------~aDiv~~S~hK~l--~Gpr 311 (520)
+++.++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+.....+. .-.+++.|++|.+ +|+|
T Consensus 147 ~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R 225 (357)
T TIGR03539 147 WLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYR 225 (357)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCcee
Confidence 999899987 444 6678899999999999999953 4433221111111 1127889999984 8999
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 391 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~ 391 (520)
+||+++++ ++.+++.+.......+.+.. ...++..++.. ....+...+++.++++.+.+.|.+.|+.+..+
T Consensus 226 ~G~~i~~~------~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p 296 (357)
T TIGR03539 226 AGFVAGDP------ALVAELLTVRKHAGLMVPAP-VQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS 296 (357)
T ss_pred EEEEecCH------HHHHHHHHHHhhcccCCCHH-HHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 99999876 66666544322222222222 22333333421 12235556777788888999998888776544
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
..+.++|+++. .+..++.+.|.++||.+. ||+. +....+++||++.. +++++++..+.|
T Consensus 297 -~~~~~~~~~~~---~~~~~~~~~l~~~gV~v~----pg~~f~~~~~~~iRis~~~------~~~~i~~~~~~l 356 (357)
T TIGR03539 297 -EAGLYLWATRG---EDAWDTVDRLAELGILVA----PGDFYGPAGSQHVRVALTA------TDERIAAAVARL 356 (357)
T ss_pred -CccEEEEEECC---CCHHHHHHHHHhCCEEEC----CccccCCCCCCeEEEEecC------CHHHHHHHHHhh
Confidence 23455666553 245677788999999994 4432 12235789999742 357777666544
No 164
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=8.1e-21 Score=196.51 Aligned_cols=275 Identities=20% Similarity=0.190 Sum_probs=186.1
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 010008 146 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 223 (520)
Q Consensus 146 ~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d 223 (520)
+.+++.+|++++ +|.+++|+ +++..++.++++|| |+|++++|.|..+. ......|. +++.++++
T Consensus 67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~--------~~~~~~g~--~v~~v~~~ 132 (354)
T PRK04635 67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA--------ISAETFNV--GVKALPLT 132 (354)
T ss_pred HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEecC
Confidence 566778899986 66779998 89999999999999 99999998765321 12234455 66666675
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh-CCEEEEechhhcccccccccCCCCC-ccc-E
Q 010008 224 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-V 298 (520)
Q Consensus 224 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~-g~~li~D~Ah~~gli~~~~~~~p~~-~aD-i 298 (520)
+++.+|.+.+++ + + ++|+|++++|+||+ ..+.+++.++++.. +++||+|+++. .+........... +.. +
T Consensus 133 -~~~~~~~~~l~~-~-~-~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~i 207 (354)
T PRK04635 133 -ADYQLPLDYIEQ-L-D-GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLV 207 (354)
T ss_pred -CCCCCCHHHHHh-c-c-CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEE
Confidence 357899998873 3 4 89999999999997 78999999998874 79999999953 3321110000001 112 6
Q ss_pred EEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 010008 299 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 376 (520)
Q Consensus 299 v~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~ 376 (520)
++.|+||++ +|.|.||+++++ ++.+.+.....+. +.+...+.+++ .+|........++..+++.++++.
T Consensus 208 v~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~~r~~ 278 (354)
T PRK04635 208 VLRTLSKAFALAGARCGFTLANE------ELIEILMRVIAPY--PVPLPVSEIAT-QALSEAGLARMKFQVLDLNAQGAR 278 (354)
T ss_pred EEechHHHhhhhHHHHhhhhCCH------HHHHHHHhhcCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHHHHHH
Confidence 789999986 688999999987 6777766543222 22222222222 233221011234556677888899
Q ss_pred HHHHHHHCC-CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHH
Q 010008 377 LASRLVELG-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 455 (520)
Q Consensus 377 l~~~L~~~G-~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~ 455 (520)
+.+.|.+.+ +.+..++ ..++|+++. +..++.+.|+++||.+... +. ...++++||++. +++
T Consensus 279 l~~~L~~~~~~~~~~~~--g~f~~~~~~----~~~~~~~~l~~~gv~v~~~----~~-~~~~~~lRis~~-------~~e 340 (354)
T PRK04635 279 LQAALSMYGGAKVLEGN--GNYVLAKFD----DVDAVFKALWDAGIVARAY----KD-PRLANCIRFSFS-------NRA 340 (354)
T ss_pred HHHHHHhCCCceECCCC--CcEEEEECC----CHHHHHHHHHHCCEEEEEC----CC-CCCCCeEEEEeC-------CHH
Confidence 999998865 7765442 346677664 4567888899999999642 11 123568999853 379
Q ss_pred HHHHHHHHHHH
Q 010008 456 EFVAIADFIHE 466 (520)
Q Consensus 456 d~~~la~~i~~ 466 (520)
|++++.+++++
T Consensus 341 ~~~~l~~al~~ 351 (354)
T PRK04635 341 ETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 165
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.88 E-value=6.8e-20 Score=193.13 Aligned_cols=328 Identities=18% Similarity=0.184 Sum_probs=210.1
Q ss_pred ecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 99 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 99 iasen~~----~~~V~ea~~s~l~~~y~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
..|.+|. .|.|++++...+. +|..|..+.|...| .+...++| +++++++|.+. .+..+||++||.
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An~ 119 (406)
T PRK13393 50 WCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSNW 119 (406)
T ss_pred eecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHH
Confidence 3455653 6889999988775 45444444443323 33445555 78889999754 356689999999
Q ss_pred HHHHhhCC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 010008 174 EVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 248 (520)
Q Consensus 174 ~~l~all~--pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~ 248 (520)
.++.++.+ +||.|+.....|+..+. .+...|. +...++. .|++++++.++. .++++|++
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~ 183 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRA--EKRIFRH------NDPADLERKLSDLDPHRPKLVAF 183 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCC--eEEEeCC------CCHHHHHHHHHhccCCCCEEEEE
Confidence 99988765 78877776666654331 1223343 3333332 377777777653 25678888
Q ss_pred cCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc-c--cc--CCCCCcccEEEeccCcccCCCCceEEEeeCCC
Q 010008 249 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDP 321 (520)
Q Consensus 249 ~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~~--~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~ 321 (520)
+.+++++ ..|+++|.++|+++|+++++|++|..|+... | .. ....+..|+++.|++|.+++ .||++++++
T Consensus 184 ~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~~-- 260 (406)
T PRK13393 184 ESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGSA-- 260 (406)
T ss_pred cCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCCH--
Confidence 7665543 7899999999999999999999998786421 1 11 11112358888999999854 569998876
Q ss_pred cchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEE
Q 010008 322 VLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 400 (520)
Q Consensus 322 ~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~v 400 (520)
++.+.+.....+. ..++.+....++...+|+.+.... ...++..++++++.+.|.+.|++++.+ ...++.+
T Consensus 261 ----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~i~~v 332 (406)
T PRK13393 261 ----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHLPN--PSHIVPV 332 (406)
T ss_pred ----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcCCC--CCCeEEE
Confidence 5655554332222 123334444455555777654322 234566788889999998888876643 2344444
Q ss_pred EecCCCCCHHHHHHHHhh-cCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L~~-~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+.. ..+...+.+.|.+ .||.++....|.. +.+.+.|||+.+... +++|++++++.|.+++..
T Consensus 333 ~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~----t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 333 MVGD-PVLCKQISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLH----TDADIEHLVQALSEIWAR 396 (406)
T ss_pred EeCC-HHHHHHHHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCC----CHHHHHHHHHHHHHHHHh
Confidence 3321 1123556666655 7999976433321 223468999987654 489999999999988754
No 166
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.87 E-value=1.7e-20 Score=195.76 Aligned_cols=327 Identities=15% Similarity=0.103 Sum_probs=209.9
Q ss_pred cceEecCCCCChHH-HHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 95 SLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 95 ~i~Liasen~~~~~-V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
.+.|+++...+++. |++++...+... . ..+.++.+.++ .+++.++++||++.+ ..+-+...|||.++.
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~~------~---hr~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLGR------S---HRQKPVKALLK-RVIEGTRELLSLPEG-YEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhccc------C---cCCHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchHHHHH
Confidence 46678887777777 999998543211 1 11235555555 688999999998532 112222347889999
Q ss_pred HHHHhhCCC-CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 010008 174 EVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 252 (520)
Q Consensus 174 ~~l~all~p-GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~ 252 (520)
+++.+++++ ++.|+. +-.|+..+ ... .....|. .++..++.+ .++.+|+++++ . +|+|.+++..
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~~----~~~--~~~~~g~-~~v~~~~~~-~g~~~d~~~i~----~--~~~V~~~h~~ 146 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSKW----ATD--VVKQLKL-EDPRVLEAD-YGSLPDLSAVD----F--DRDVVFTWNG 146 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHHH----HHH--HHhhcCC-CCceEeccC-CCCCCCHhhcC----C--CCCEEEEecC
Confidence 999999875 455554 44444321 100 0012233 033333333 34678877743 2 5667666444
Q ss_pred C--CCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHH
Q 010008 253 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 329 (520)
Q Consensus 253 ~--p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~ 329 (520)
+ +...|+++|++ +++|+++++|++|+.|.+..++. .+|++++|.||||.||.| |+++.+++ ..+
T Consensus 147 t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-----~iD~~~~s~~K~l~~P~G~g~l~v~~~------~~~ 213 (378)
T PRK03080 147 TTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-----KLDVYTFSWQKVLGGEGGHGMAILSPR------AVE 213 (378)
T ss_pred Cccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-----HCcEEEEehhhhCCCCCceEEEEECHH------HHH
Confidence 3 34889999999 88999999999999987754432 379999999999999988 99999873 333
Q ss_pred hhccc---------------------CC-CCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHCC-
Q 010008 330 AINNA---------------------VF-PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG- 385 (520)
Q Consensus 330 ~i~~~---------------------~~-p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~G- 385 (520)
++... .+ .+..++|+...+.++..+|+.+.+. +.+...++..+.++++.+.|.+.+
T Consensus 214 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 293 (378)
T PRK03080 214 RLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPW 293 (378)
T ss_pred hhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22210 01 1233567777888888899988876 678888888999999999998865
Q ss_pred CEEecC-C-CCC-eeEEEEecCC--CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 386 YKLVSG-G-SDN-HLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 386 ~~v~~~-g-t~~-~~~~vd~~~~--g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
+.++.. . ..+ .++.+.+... +.+.+ +...|.+.||.+..+.. .. ..+++|+|...+++ ++|++++
T Consensus 294 ~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~-~~~~l~~~~i~v~~g~~----~~-~~~~vRis~~~~~t----~~di~~l 363 (378)
T PRK03080 294 ATPLVADPATRSNTSVTLDFVDAQAAVDAA-AVAKLLRENGAVDIEPY----RD-APNGLRIWCGPTVE----PADVEAL 363 (378)
T ss_pred cccccCCccccCccEEEEEcCCchHHHHHH-HHHHHHHcCCeeccccc----cC-CCCcEEEecCCCCC----HHHHHHH
Confidence 566532 1 112 2333333320 12333 44445566888754211 11 24689999887765 8999999
Q ss_pred HHHHHHHHHH
Q 010008 461 ADFIHEGVEI 470 (520)
Q Consensus 461 a~~i~~~l~~ 470 (520)
+++|++++..
T Consensus 364 ~~al~~~~~~ 373 (378)
T PRK03080 364 TPWLDWAFER 373 (378)
T ss_pred HHHHHHHHHH
Confidence 9999987664
No 167
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=6e-20 Score=207.43 Aligned_cols=297 Identities=21% Similarity=0.199 Sum_probs=207.2
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH---HHHHHHHHhhCCC-CC----EEEEcCCCCCccccccccccccccccccce
Q 010008 143 LCQKRALAAFNLDENKWGVNVQPLSGS---PANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 214 (520)
Q Consensus 143 ~a~~~~~~lfg~~~~~~~~~V~~~sGs---~A~~~~l~all~p-GD----~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~ 214 (520)
.+++++++++|.+. +.+++.+|+ .|+..++.+++++ || +|++++.+|+..... ..+.|.
T Consensus 572 ~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~--------a~~~G~- 638 (993)
T PLN02414 572 DLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPAS--------AAMCGM- 638 (993)
T ss_pred HHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHH--------HHHCCC-
Confidence 57799999999954 578888886 4888888999876 98 899999888766432 223454
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 215 FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 215 ~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
+++.++.| +++.+|+++|+++++++ ++++|++.+++|-+ ..|+++|+++|+++|+++++|+||..++... .
T Consensus 639 -~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l---~ 713 (993)
T PLN02414 639 -KIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL---T 713 (993)
T ss_pred -EEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc---C
Confidence 66677676 57899999999999852 57888888766554 5679999999999999999999998776422 2
Q ss_pred CCCC-cccEEEeccCcccCCCCc------eEEEeeCCCcchhhHHHhhccc----------CC-CCCCCC----ChHHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA----------VF-PGLQGG----PHNHTI 348 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg------G~I~~~~~~~~~~~l~~~i~~~----------~~-p~~~g~----p~~~~i 348 (520)
.|.. ++|++++|.||||.||.| |++.+++. +...+-.. .+ +...|+ +..+..
T Consensus 714 ~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al 787 (993)
T PLN02414 714 SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSAL 787 (993)
T ss_pred CccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh------hcccCCCCccccCCCcccccCCCCcCCccchhhhhHH
Confidence 3333 799999999999876653 88888773 32222110 00 111233 222222
Q ss_pred HH-HHHH-HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCC---CCCeeEEEEecC----CCCCHHHHHHHHhhc
Q 010008 349 GG-LAVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRP----MGIDGARVEKILDMA 419 (520)
Q Consensus 349 aa-la~a-l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~g---t~~~~~~vd~~~----~g~~~~~~~~~L~~~ 419 (520)
.+ .+.+ +..+..+++++..++...|+.++++.|.+ ++.+...+ ..-|-+.++++. .+++..++.+.|.+.
T Consensus 788 ~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~ 866 (993)
T PLN02414 788 ILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDY 866 (993)
T ss_pred HHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHc
Confidence 22 1222 34444455677789999999999999977 55544322 223445666652 246668888989899
Q ss_pred CeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 420 SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 420 gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
||..-..++| .++.+||+.....+ ++|++++++.+..+.....++
T Consensus 867 Gihapt~~~p------v~~~lmiepTE~~s----keelDrf~~al~~i~~e~~~~ 911 (993)
T PLN02414 867 GFHAPTMSWP------VPGTLMIEPTESES----KAELDRFCDALISIREEIADI 911 (993)
T ss_pred CcEEeeeccc------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHH
Confidence 9987432222 36789998776654 899999999998888776554
No 168
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.87 E-value=9.5e-21 Score=198.95 Aligned_cols=330 Identities=16% Similarity=0.183 Sum_probs=198.6
Q ss_pred hccceEecCC----C-CCh--HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 010008 93 FKSLELIASE----N-FTS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 163 (520)
Q Consensus 93 ~~~i~Liase----n-~~~--~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V 163 (520)
.+.|+|..+. + .+| +.+.+++...+.+....+|+. ..|. .++.+...+++.+..+. +++++ +|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~---~~G~---~~lR~aia~~~~~~~~~~~~~~~i--~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP---IEGL---AAYRQAVQELLFGADSPALAAGRV--AT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC---CCCC---HHHHHHHHHHhcCCCCcccccCeE--EE
Confidence 3568887652 2 234 678888877654322223432 2232 34554445665544332 45422 34
Q ss_pred ecCChH-HHHHHHHHhh--CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhh
Q 010008 164 QPLSGS-PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAI 239 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~-d~~~~~iD~d~le~~i~ 239 (520)
.+|+|+ +|+.+++.++ ++|||+|++.+|.|.++.. .+...|. +++.+++ +++++.+|++++++.++
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~ 167 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGL--EVKTYPYYDAATKGLDFDAMLADLS 167 (396)
T ss_pred EecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCC--cEEEEeccccccCccCHHHHHHHHH
Confidence 778988 8998887665 6899999999998866532 3344565 6666666 33457899999999886
Q ss_pred hcC--CcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccc-cccCCCC---C--c-ccEEEeccCc
Q 010008 240 LFR--PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF---K--Y-CDVVTTTTHK 305 (520)
Q Consensus 240 ~~~--pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~~~~~p~---~--~-aDiv~~S~hK 305 (520)
..+ .+++++++++||+ .+ .+++|.++|+++|+++|+|++ |.++.+. +....++ . + --|++.|++|
T Consensus 168 ~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK 246 (396)
T PRK09257 168 QAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIA-YQGFGDGLEEDAYGLRAFAAAGLELLVASSFSK 246 (396)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-ccccccchHHHHHHHHHHHhcCCcEEEEEEcCC
Confidence 433 3455668899997 33 467888899999999999998 5555532 1101111 1 1 1277899999
Q ss_pred cc--CCCCceEEEe--eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHh-----cCchhHHHHHHHHHHHHH
Q 010008 306 SL--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRA 376 (520)
Q Consensus 306 ~l--~GprgG~I~~--~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~i~~na~~ 376 (520)
++ +|+|.||+++ .+.. ...++..++.........+ ++.....+++..+..- .....++..+++.++++.
T Consensus 247 ~~~~~GlRiG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~ 324 (396)
T PRK09257 247 NFGLYGERVGALSVVAEDAE-EADRVLSQLKATIRTNYSN-PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL 324 (396)
T ss_pred cCccccccceeEEEEeCCHH-HHHHHHHHHHHHhhhhcCC-CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 4999999984 2210 0001222222221111122 2222222222223210 011234567778888999
Q ss_pred HHHHHHHCC----CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 377 LASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 377 l~~~L~~~G----~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
+.+.|++.+ +.+..+ ..+.++|+++ +.+.+.+++++.||.+ +| .+ ||++.. .
T Consensus 325 l~~~L~~~~~~~~~~~~~p-~gg~~~w~~l-----~~~~~~~l~~~~~V~~----~p--------~~-ri~~~~-----~ 380 (396)
T PRK09257 325 LVEALKAKGPSRDFDFIAR-QRGMFSYSGL-----TPEQVDRLREEFGVYA----VG--------SG-RINVAG-----L 380 (396)
T ss_pred HHHHHHhcCCCCCcccccc-cceEEEecCC-----CHHHHHHHHHcCCEEE----cC--------CC-eEEEee-----C
Confidence 999998864 444333 2245566654 3467788889999988 33 12 998754 3
Q ss_pred CHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEG 467 (520)
Q Consensus 453 ~~~d~~~la~~i~~~ 467 (520)
++++++++++.|+++
T Consensus 381 ~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 381 NESNIDYVAEAIAAV 395 (396)
T ss_pred CHHHHHHHHHHHHhh
Confidence 478999999999875
No 169
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.87 E-value=8.1e-20 Score=187.22 Aligned_cols=299 Identities=19% Similarity=0.177 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecC-ChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 135 EYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~-sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
...+++++..++++...++..... .++.++ +|++++..++.++.++||+|+++++.|.++.. .+...|.
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~ 105 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPP--EEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA 105 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC
Confidence 335677766667777666632111 133334 45599999999999999999999988766531 2233443
Q ss_pred eEEEEEcccCCCCCCCCH--HHHHHHhhhcCCcEEEEcCCCCCC--CCCHH---HHHHHHHHhCCEEEEechhhcccccc
Q 010008 214 YFESMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAA 286 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~--d~le~~i~~~~pklIi~~~s~~p~--~~d~~---~i~~ia~~~g~~li~D~Ah~~gli~~ 286 (520)
+++.++++. ++..+. +.++..+.+ ++++|++..++||+ ..|.+ +|.++|+++|+++++|++|..+. ..
T Consensus 106 --~~~~i~~~~-~~~~~~~~~~~~~~~~~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~-~~ 180 (350)
T cd00609 106 --EVVPVPLDE-EGGFLLDLELLEAAKTP-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV-YD 180 (350)
T ss_pred --EEEEEeccc-ccCCccCHHHHHhhcCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhce-eC
Confidence 566666653 344443 666666655 89999998777765 56654 55589999999999999976543 22
Q ss_pred cccC----CCC-CcccEEEeccCcccC--CCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc
Q 010008 287 SVVA----DPF-KYCDVVTTTTHKSLR--GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 359 (520)
Q Consensus 287 ~~~~----~p~-~~aDiv~~S~hK~l~--GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~ 359 (520)
+... ..- .++|+++.|+||++. |++.|+++++++ ++.+.+..... ...++++.....++..+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 254 (350)
T cd00609 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLP-YTTSGPSTLSQAAAAAALDDGE 254 (350)
T ss_pred CcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHH-hcccCCChHHHHHHHHHHhCcH
Confidence 2221 111 157899999999984 677799999884 46665544322 2234556666666666666432
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCE
Q 010008 360 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG 439 (520)
Q Consensus 360 ~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~g 439 (520)
.+.+...+++.++++++.+.|.+.+...+.......++++.+.. ..+...+.+.|.+.||.+.....+. +..+.+
T Consensus 255 -~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~---~~~~~~ 329 (350)
T cd00609 255 -EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRPGSAFG---EGGEGF 329 (350)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC-CChHHHHHHHHHhCCEEEecccccc---cCCCCe
Confidence 35677788899999999999988655432222234556666543 2345678889999999996432111 124679
Q ss_pred EEEccCCccccCCCHHHHHHHHHHHH
Q 010008 440 IRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 440 iRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
+||+.... .+|+++++++|+
T Consensus 330 iRi~~~~~------~~~i~~~~~al~ 349 (350)
T cd00609 330 VRLSFATP------EEELEEALERLA 349 (350)
T ss_pred EEEEeeCC------HHHHHHHHHHhh
Confidence 99987632 699999998875
No 170
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.87 E-value=1e-19 Score=191.48 Aligned_cols=332 Identities=15% Similarity=0.149 Sum_probs=197.2
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..+++. +++.|.+++...+.+...+ .....|+.......+.+.+.+++.+ .+++++ +|.+++|+ +
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~~ 106 (402)
T TIGR03542 34 DIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAKC 106 (402)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcHH
Confidence 56888877764 6788999998877643111 0001121111123444333333211 157775 66779998 7
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc---------eEEEEEcccCCC-CCCCCHHHHHHHhhh
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDES-TGLVDYDMLEKTAIL 240 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~---------~~~~v~~~~d~~-~~~iD~d~le~~i~~ 240 (520)
++.. +.+++.|||+|++++|.|.++.. .....|. +.++++++++++ ++.+|++. .
T Consensus 107 al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~ 171 (402)
T TIGR03542 107 DVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------E 171 (402)
T ss_pred HHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc------c
Confidence 7775 46677999999999998865532 1122232 115556666533 34455322 1
Q ss_pred cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---Cc---ccEEEeccCccc--
Q 010008 241 FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHKSL-- 307 (520)
Q Consensus 241 ~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~~---aDiv~~S~hK~l-- 307 (520)
.++|+|+++.|+||+ .++ +++|.++|+++|++||+|+++ ..+...+..+.++ +. .-+++.|++|.+
T Consensus 172 ~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 250 (402)
T TIGR03542 172 PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF 250 (402)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence 278999999999997 555 788889999999999999984 4554433222222 21 126689999976
Q ss_pred CCCCceEEEeeCCCcchhhHH--------HhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 010008 308 RGPRGGMIFFKKDPVLGVELE--------SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 379 (520)
Q Consensus 308 ~GprgG~I~~~~~~~~~~~l~--------~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~ 379 (520)
+|.|.||+++++ ++. +.+.........+.+...+.++ ..++..-......+..+.+.++++.+.+
T Consensus 251 pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR03542 251 TGVRLGWTVVPK------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAA-EAAYAGEGLQPILEAISYYMENARILRK 323 (402)
T ss_pred CCcceEEEEecH------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHH-HHHHcCcchhHHHHHHHHHHHHHHHHHH
Confidence 789999999987 443 2221111111112222333332 2233221111234455667788888999
Q ss_pred HHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHH-HHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHH
Q 010008 380 RLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEK-ILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEF 457 (520)
Q Consensus 380 ~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~-~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~ 457 (520)
.|.+.|+++..+ ....++|+++.. .++..++.+ ++++.||.+. ||+. +....+++||+.. .+++++
T Consensus 324 ~L~~~~~~~~~~-~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~----pg~~f~~~~~~~iRis~~------~~~~~l 391 (402)
T TIGR03542 324 ALEAAGFKVYGG-EHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGT----PGSGFGPSGEGFVRFSAF------GKRENI 391 (402)
T ss_pred HHHhcCceecCC-CceeEEEEECCC-CCCHHHHHHHHHHhCCEEEe----CchhhCCCCCCEEEEEec------CCHHHH
Confidence 998888776543 345677888753 456655555 4567899994 4443 2223578999842 246888
Q ss_pred HHHHHHHHHH
Q 010008 458 VAIADFIHEG 467 (520)
Q Consensus 458 ~~la~~i~~~ 467 (520)
++..+.|.++
T Consensus 392 ~~~l~~l~~~ 401 (402)
T TIGR03542 392 VEACERIKEA 401 (402)
T ss_pred HHHHHHHHhh
Confidence 8888777654
No 171
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=4.2e-20 Score=191.91 Aligned_cols=284 Identities=15% Similarity=0.114 Sum_probs=188.3
Q ss_pred HHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 145 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 145 ~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
++.+++++|++++ +|.+++|+ +++..++.++++|| |+|++.+|.++.+. ......|. +++.+++
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~--------~~~~~~g~--~~~~v~~ 130 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA--------VCARLQNA--PLVEVPL 130 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH--------HHHHHcCC--EEEEEec
Confidence 3567778899875 67779997 89999999999999 79999888654221 11233455 6666666
Q ss_pred CC--CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH--hCCEEEEechhhcccccccccCCCCC-c
Q 010008 223 DE--STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-Y 295 (520)
Q Consensus 223 d~--~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~--~g~~li~D~Ah~~gli~~~~~~~p~~-~ 295 (520)
+. +++.+|++++++.+...++++|++++|+||+ .++.+++.++++. .++++|+|+++ ..+.........+. +
T Consensus 131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay-~~f~~~~~~~~~~~~~ 209 (364)
T PRK04781 131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAY-GEFSDVPSAVGLLARY 209 (364)
T ss_pred CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcc-hhhcCCcchHHHHhhC
Confidence 32 2346899998665543489999999999997 7788888888765 38999999984 34432110000011 1
Q ss_pred cc-EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 010008 296 CD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 296 aD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 372 (520)
.. +++.|++|++ +|.|.||+++++ ++.+.+.+...+. +.....+.++. .+|.........+..+++.+
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~~--~~~~~~~~~a~-~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAPY--PVPTPCAALAE-QALSAPALAVTARRVAEVRA 280 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCCC--CCCHHHHHHHH-HHHhcccHHHHHHHHHHHHH
Confidence 12 7789999986 799999999987 7777776654332 22222233332 23332100123455667888
Q ss_pred HHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccC
Q 010008 373 NCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 451 (520)
Q Consensus 373 na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g 451 (520)
+++.+.+.|++. |+..+.+ ....++|+++. +..++.+.|.+.||.|.. |+..+..++++||++.
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p-~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~----~~~~~~~~~~~Ris~~------ 345 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYP-SQGNFLLVRFD----DAEAAFQALLAAGVVVRD----QRAAPRLSDALRITLG------ 345 (364)
T ss_pred HHHHHHHHHHhCCCCCeECC-CCCcEEEEEcC----CHHHHHHHHHHCCeEEee----CCCCCCCCCeEEEeCC------
Confidence 889999999875 6642333 23455777764 457788889999999954 3321123578999864
Q ss_pred CCHHHHHHHHHHHHHHH
Q 010008 452 FSEKEFVAIADFIHEGV 468 (520)
Q Consensus 452 ~~~~d~~~la~~i~~~l 468 (520)
+.++++++.+.|+++.
T Consensus 346 -~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 346 -TPEQNDRVLAALQRTQ 361 (364)
T ss_pred -CHHHHHHHHHHHHHHH
Confidence 2789999999997643
No 172
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.87 E-value=1.5e-20 Score=194.86 Aligned_cols=330 Identities=20% Similarity=0.227 Sum_probs=206.3
Q ss_pred cceEecCCCC------ChHHHHHHHhh-hhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCC
Q 010008 95 SLELIASENF------TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 167 (520)
Q Consensus 95 ~i~Liasen~------~~~~V~ea~~s-~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~s 167 (520)
.|+|..+++. .++++++++.. .....-..+|+. ......+++...+++.+..|.+.+.. .+|.+++
T Consensus 3 ~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~ 75 (363)
T PF00155_consen 3 VINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPP------PQGYPELREAIADFLGRRYGVPVDPE-ANILVTS 75 (363)
T ss_dssp EEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTC------TTHHHHHHHHHHHHHHHHHTHHTTGG-EGEEEES
T ss_pred EEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCC------chhhHHHHHHHHHHhhhccCcccccc-eEEEEec
Confidence 4566555442 34666666654 222222334443 22234566444444443334332211 2677899
Q ss_pred hH-HHHHHHHHhh-CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhhc---
Q 010008 168 GS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF--- 241 (520)
Q Consensus 168 Gs-~A~~~~l~al-l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~~--- 241 (520)
|+ +++..++..+ .++||+|++++|.|.++.. .+...|. ++++++++. +++.+|++++++.+++.
T Consensus 76 G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 145 (363)
T PF00155_consen 76 GAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLGA--EVIPVPLDSENDFHLDPEALEEALDELPSK 145 (363)
T ss_dssp HHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTTS--EEEEEEEEETTTTEETHHHHHHHHHTSHTT
T ss_pred ccccchhhhhhcccccccccceecCCccccccc--------cccccCc--eeeecccccccccccccccccccccccccc
Confidence 99 5666666677 7899999999998765431 2344565 566666542 45799999999998875
Q ss_pred --CCcEEEEcCCCCCC--CCCHH---HHHHHHHHhCCEEEEechhhcccccccccC----CCCC-ccc-EEEeccCccc-
Q 010008 242 --RPKLIIAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAASVVA----DPFK-YCD-VVTTTTHKSL- 307 (520)
Q Consensus 242 --~pklIi~~~s~~p~--~~d~~---~i~~ia~~~g~~li~D~Ah~~gli~~~~~~----~p~~-~aD-iv~~S~hK~l- 307 (520)
++++|+++.++||+ .++.+ +|.++|+++|+++++|++|. +++..+... ..+. +.+ +++.|++|++
T Consensus 146 ~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 224 (363)
T PF00155_consen 146 GPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFG 224 (363)
T ss_dssp TETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTT
T ss_pred ccccceeeecccccccccccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeeeecccccc
Confidence 56889999999987 55555 55555999999999999954 444332110 1111 233 8889999976
Q ss_pred -CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHC
Q 010008 308 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQNKVVSNCRALASRLVEL 384 (520)
Q Consensus 308 -~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~--~~~~~~~~~i~~na~~l~~~L~~~ 384 (520)
+|.|.|++++++ ++.+.+.....++.. +....++++..+..... ...++..+++.++++.+.+.|++.
T Consensus 225 ~~GlRvG~i~~~~------~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 295 (363)
T PF00155_consen 225 LPGLRVGYIVAPP------ELIERLRRFQRSGLS---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI 295 (363)
T ss_dssp SGGGTEEEEEEEH------HHHHHHHHHHHHTTS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccchh------hhhhhhhhccccccc---cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Confidence 678889999977 677776654333322 22222222223332211 145778888999999999999888
Q ss_pred CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhh-cCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHH
Q 010008 385 GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 385 G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~-~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~ 463 (520)
|+.+..+. .+++.|+++... +..++.+.|.+ .||.+. ||.... .++++||++ +. .++++++++++.
T Consensus 296 ~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~----pg~~~~-~~~~iRi~~-a~----~~~e~~~~~~~~ 362 (363)
T PF00155_consen 296 GITVLPPE-AGFFLWVRLDPN--DAEELAQELLEEYGILVR----PGSYFG-VPGYIRISL-AS----HSEEDLEEALER 362 (363)
T ss_dssp TSEEEHHS-BSSEEEEEESHH--HHHHHHHHHHHHHTEEEE----EGGGGT-STTEEEEEG-GC----SCHHHHHHHHHH
T ss_pred hhheeecc-CccEEEEEcccc--hHHHHHHHHHHhCCEEEE----ecCCCC-CCCEEEEEe-cc----CCHHHHHHHHhh
Confidence 99988653 356666666432 34555555555 599995 444311 278999997 32 347999998887
Q ss_pred H
Q 010008 464 I 464 (520)
Q Consensus 464 i 464 (520)
|
T Consensus 363 l 363 (363)
T PF00155_consen 363 L 363 (363)
T ss_dssp H
T ss_pred C
Confidence 5
No 173
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.87 E-value=1.1e-19 Score=193.80 Aligned_cols=300 Identities=17% Similarity=0.163 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceE
Q 010008 137 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 215 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~ 215 (520)
...+.+...+++....|+..+ . -+|.+|+|+ +|+.+++..+++|||+|++-+|+|.+.+. .+...|.
T Consensus 134 ~~~LR~~ia~~l~~~~g~~~~-~-~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~-- 201 (459)
T COG1167 134 LPELREAIAAYLLARRGISCE-P-EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA-- 201 (459)
T ss_pred cHHHHHHHHHHHHHhcCCccC-c-CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--
Confidence 345555555677766677642 1 167789999 89999999999999999999998765532 3344554
Q ss_pred EEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhccccccccc
Q 010008 216 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV 289 (520)
Q Consensus 216 ~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~ 289 (520)
+++++++| ...+|+|++++.+...+||++++. ...||+ ..+ -++|.++|+++|+++|.|.. +..+.+.+..
T Consensus 202 ~~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~-y~el~~~~~p 278 (459)
T COG1167 202 RVIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDY-YGELRYDGPP 278 (459)
T ss_pred cEEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCc-chhhhcCCCC
Confidence 77777776 457999999999998889999987 446886 444 45799999999999999987 4455544433
Q ss_pred CCCCC-----cccEEEeccCccc-CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh
Q 010008 290 ADPFK-----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 363 (520)
Q Consensus 290 ~~p~~-----~aDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~ 363 (520)
+.++. +--|.++||+|++ +|.|.||+++++ ++.+++.....-...+++...+ .+++.-+. ...|
T Consensus 279 ~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~k~~~~~~~s~~~Q-~~la~~l~---~G~~ 348 (459)
T COG1167 279 PPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRLKQAADLGPSSLSQ-AALAAFLL---SGHY 348 (459)
T ss_pred CCChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHHHHHhcCCCChHHH-HHHHHHHH---cCCH
Confidence 33333 1227889999997 899999999998 5666554322222233333322 22322222 2223
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHCC---CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC---C
Q 010008 364 ----KVYQNKVVSNCRALASRLVELG---YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDK---S 433 (520)
Q Consensus 364 ----~~~~~~i~~na~~l~~~L~~~G---~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~---~ 433 (520)
....+.+.++++.+.+.|.+.+ +.+..+ ....++|+.+. .+++...+.+.+.+.||.+.. +|.. .
T Consensus 349 ~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p-~gG~flwl~l~-~~~~~~~l~~~a~~~gv~i~~---~g~~f~~~ 423 (459)
T COG1167 349 DRHLRRLRREYARRRDALLEALAEYLPELATWTRP-EGGLFLWLELP-EGIDARELLAAALEKGVVVTP---LGSAFSAD 423 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecC-CceEEEEEEcC-CCCCHHHHHHHHHHCCCEEEc---CCccccCC
Confidence 4455666777788888888742 233222 33456677774 567888888888889999843 1332 1
Q ss_pred CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 434 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 434 ~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+...+++|+|....+ ++++++..+.|.++++..
T Consensus 424 ~~~~~~~Rl~~s~~~-----~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 424 GDPRNGLRLSFSSPS-----EEEIEEGIKRLAALLREA 456 (459)
T ss_pred CCCCCeEEEEcCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 113458999987543 688988888888887653
No 174
>PLN02397 aspartate transaminase
Probab=99.86 E-value=5.8e-20 Score=194.44 Aligned_cols=267 Identities=19% Similarity=0.236 Sum_probs=171.6
Q ss_pred eecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHhhh-
Q 010008 163 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAIL- 240 (520)
Q Consensus 163 V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~-d~~~~~iD~d~le~~i~~- 240 (520)
|..++|+.++...+.+++.|||+|++++|.|.++.. .+...|. +++.+++ +++++.+|++.+++.+..
T Consensus 122 i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~v~l~~~~~~~~d~~~l~~~l~~~ 191 (423)
T PLN02397 122 CLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV--PVRTYRYYDPKTRGLDFDGLLEDLKAA 191 (423)
T ss_pred cccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC--eEEEeecccCcCCccCHHHHHHHHHhC
Confidence 334455555666666777899999999998876532 2345565 6666666 334578999999887763
Q ss_pred -cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccc---cCC--CCC-ccc--EEEeccCcc
Q 010008 241 -FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV---VAD--PFK-YCD--VVTTTTHKS 306 (520)
Q Consensus 241 -~~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~---~~~--p~~-~aD--iv~~S~hK~ 306 (520)
.+++++++++|+||+ .. .+++|.++|+++|+++|+|++ |.++.+.+. .+. .+. ..+ |++.|++|+
T Consensus 192 ~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~-Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~ 270 (423)
T PLN02397 192 PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA-YQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKN 270 (423)
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-cCCccCCchhhhhHHHHHHHhcCCcEEEEEECccc
Confidence 256788888999997 44 467788899999999999999 667765431 111 111 112 678899998
Q ss_pred c--CCCCceEEE--eeCCCcchhhHHH----hhcccCCCCCCCCChHHHHHHHHHHHHHh--cC---chhHHHHHHHHHH
Q 010008 307 L--RGPRGGMIF--FKKDPVLGVELES----AINNAVFPGLQGGPHNHTIGGLAVCLKHA--QS---PEFKVYQNKVVSN 373 (520)
Q Consensus 307 l--~GprgG~I~--~~~~~~~~~~l~~----~i~~~~~p~~~g~p~~~~iaala~al~~~--~~---~~~~~~~~~i~~n 373 (520)
+ +|+|.||++ .... ++.+ .+.........+.+...+ .+.+.+|..- .+ ..+++..+++.++
T Consensus 271 ~~~~G~RvG~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~q-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~r 344 (423)
T PLN02397 271 MGLYGERVGALSVVCKSA-----DVAVRVKSQLKLIARPMYSNPPIHGA-SIVATILGDPELFSEWTKELKGMADRIISM 344 (423)
T ss_pred CCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccCCCcHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6 699999985 3221 3322 332222111222222222 2222233210 00 1135567788899
Q ss_pred HHHHHHHHHHCC----CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccc
Q 010008 374 CRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 449 (520)
Q Consensus 374 a~~l~~~L~~~G----~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt 449 (520)
++.+.+.|++.| +.++.+ ....++|+++ +.+.+.++|+++||.+. +++ ||++..
T Consensus 345 r~~l~~~L~~~~~~~~~~~~~p-~gg~fl~~~l-----~~~~~~~Ll~~~~V~v~------------~~~-Ri~~~~--- 402 (423)
T PLN02397 345 RQKLYDALEARGSPGDWSHITK-QIGMFSFTGL-----NKEQVDRMTKEYHIYMT------------RDG-RISMAG--- 402 (423)
T ss_pred HHHHHHHHHhcCCCCCCCcccC-CceEEEecCC-----CHHHHHHHHHhCCEEEC------------CCC-eEEEee---
Confidence 999999999876 665443 2346667665 34677778899999993 123 988643
Q ss_pred cCCCHHHHHHHHHHHHHHHHH
Q 010008 450 RGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 450 ~g~~~~d~~~la~~i~~~l~~ 470 (520)
.++++++++++.|++++.+
T Consensus 403 --~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 403 --LSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred --CCHHHHHHHHHHHHHHHhc
Confidence 4579999999999999763
No 175
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=5.6e-20 Score=188.56 Aligned_cols=300 Identities=13% Similarity=0.077 Sum_probs=193.4
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 172 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~ 172 (520)
..|+|..+||+..+ . ...+. ||... .+++. +.+++.+|++++ +|.+++|+ +++
T Consensus 17 ~~i~l~~Nenp~~~-----~--~~~~~----Yp~~~-------~~~lr----~~ia~~~~~~~~----~I~it~Gs~~~l 70 (332)
T PRK06425 17 RIIDFSANINDFMD-----I--GDISI----YPEIS-------YTDIE----DQIKIYTQGLKI----KVLIGPGLTHFI 70 (332)
T ss_pred CEEEeccccCCCcC-----h--hhccc----CcCcC-------HHHHH----HHHHHHhCCCcc----eEEECCCHHHHH
Confidence 45889999998631 0 01122 34311 23333 678889999875 57779999 788
Q ss_pred HHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 010008 173 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 252 (520)
Q Consensus 173 ~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~ 252 (520)
..++. +++||+ |++++|.|..+. ..+...|. +++.++++. ..+|.+.+++ .++|+|++++|+
T Consensus 71 ~~~~~-~~~~~~-vv~~~P~y~~y~--------~~~~~~G~--~v~~vp~~~--~~~~~~~l~~----~~~k~v~l~nP~ 132 (332)
T PRK06425 71 YRLLS-YINVGN-IIIVEPNFNEYK--------GYAFTHGI--RISALPFNL--INNNPEILNN----YNFDLIFIVSPD 132 (332)
T ss_pred HHHHH-HhCCCc-EEEeCCChHHHH--------HHHHHcCC--eEEEEeCCc--ccCcHHHHhh----cCCCEEEEeCCC
Confidence 87776 578875 666688765432 23445565 666666653 3456555442 389999999999
Q ss_pred CCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-cc-cEEEeccCccc--CCCCceEEEeeCC
Q 010008 253 YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YC-DVVTTTTHKSL--RGPRGGMIFFKKD 320 (520)
Q Consensus 253 ~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~a-Div~~S~hK~l--~GprgG~I~~~~~ 320 (520)
||+ ..+ +++|.++|+++|++||+|++ |..+...+ .++.. + +. -+++.|++|++ +|.|.||+++++
T Consensus 133 NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~-Y~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~- 209 (332)
T PRK06425 133 NPLGNLISRDSLLTISEICRKKGALLFIDEA-FIDFVPNR-AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD- 209 (332)
T ss_pred CCcCCccCHHHHHHHHHHHHHcCCEEEEecc-hhcccccc-chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-
Confidence 997 555 56677778899999999998 44554322 11111 1 11 26779999975 799999999987
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 399 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~ 399 (520)
++.+.+.+...+...+ ..+. + ++.......+ +...+.+.++++.+.+.|.+.|+.+..+. ...++|
T Consensus 210 -----~li~~l~~~~~~~~~~-----~~~~-~-~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-~g~f~~ 276 (332)
T PRK06425 210 -----YNMKISRKITEPWSVC-----DPAI-D-FIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDP-SANFIT 276 (332)
T ss_pred -----HHHHHHHHcCCCCccC-----HHHH-H-HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC-CceEEE
Confidence 6777766533222111 1111 1 1221111222 45677788889999999998888876432 345677
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+.+. +..++.+.|.++||.+.. |.. +...++++||++. +.++++++.++|++++
T Consensus 277 ~~~~----~~~~~~~~l~~~gi~v~~----~~~f~~~~~~~iRis~~-------~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 277 FMIP----DAHDFYSYLLKNGILVRL----LDDYECLGEQYIRIAIR-------RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEcC----CHHHHHHHHHHCCeEEEE----CCCCCCCCCCEEEEEeC-------CHHHHHHHHHHHHHHh
Confidence 7663 466777777789999954 432 1223578999864 2689999999998764
No 176
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=5.5e-21 Score=192.73 Aligned_cols=219 Identities=19% Similarity=0.176 Sum_probs=156.0
Q ss_pred HHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sG-s~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
++++++++||++. +.+. ++| +.|+.+++.++++|||+|++..+.|.++.. .+...|. +++.++.
T Consensus 64 ~~~~~A~~~ga~~----~~~~-~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~--~~~~v~~ 128 (294)
T cd00615 64 AQELAARAFGAKH----TFFL-VNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGA--VPVYLKP 128 (294)
T ss_pred HHHHHHHHhCCCC----EEEE-cCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCC--EEEEecC
Confidence 3478889999875 2233 455 489999999999999999999987755431 2334555 4444433
Q ss_pred CCCC-----CCCCHHHHHHHhhh-cCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC-C
Q 010008 223 DEST-----GLVDYDMLEKTAIL-FRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K 294 (520)
Q Consensus 223 d~~~-----~~iD~d~le~~i~~-~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~-~ 294 (520)
+.+. +.+|++++++++++ .++|+|+++.|++.+ ..|+++|.++|+++|+++++|+||.+++.+.+..+... .
T Consensus 129 ~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~ 208 (294)
T cd00615 129 ERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294)
T ss_pred ccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh
Confidence 3221 47999999999875 268999888776544 78999999999999999999999987654433322222 2
Q ss_pred -cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 010008 295 -YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 295 -~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 372 (520)
++|++++|+||+++|+++ |++..+++.. ..+++.........++|+...++++..+++.+.. +..++.++..+
T Consensus 209 ~~~div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~-~g~~~~~~~~~ 283 (294)
T cd00615 209 AGADIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMAL-EGKELVEELIE 283 (294)
T ss_pred cCCcEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 689999999999999886 6666665311 1223333322334578899999999998887642 33667788888
Q ss_pred HHHHHHHHHH
Q 010008 373 NCRALASRLV 382 (520)
Q Consensus 373 na~~l~~~L~ 382 (520)
+++.+++.|.
T Consensus 284 ~~~~~r~~l~ 293 (294)
T cd00615 284 LALYARQEIN 293 (294)
T ss_pred HHHHHHHHHh
Confidence 8888888775
No 177
>PRK05968 hypothetical protein; Provisional
Probab=99.86 E-value=2.5e-20 Score=194.90 Aligned_cols=289 Identities=18% Similarity=0.137 Sum_probs=190.3
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++.++++| +++++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++.+.... ..+...|.
T Consensus 62 ~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~ 128 (389)
T PRK05968 62 NPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE----TILKRMGV 128 (389)
T ss_pred ChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCc
Confidence 45567777 67889999976 2456899999999999999999999999988876532110 11223344
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
+++.++. .|++++++++ + ++|+|++..|.++. ..|+++|.++|+++|+++++|++|..+... .
T Consensus 129 --~v~~vd~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~-----~ 193 (389)
T PRK05968 129 --EVDYVDG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ-----R 193 (389)
T ss_pred --eEEEeCC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----C
Confidence 5555432 2889999888 4 78999998887775 679999999999999999999998665421 2
Q ss_pred CCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
|+. ++|++++|+||++.|| ++|+++.++ ++.+++.....+...+..+ ...+++ .+..+ ..+....
T Consensus 194 p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~~~~~~~g~~~~-~~~A~~--~l~~L--~tl~~r~ 262 (389)
T PRK05968 194 PITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINAEAYPYLGAKLS-PFEAWL--LLRGL--RTLPLRM 262 (389)
T ss_pred chhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHHHHHHhCCCCCC-hHHHHH--HHccc--CcHHHHH
Confidence 343 7899999999999886 468888776 5666555432222212222 222222 22222 2346677
Q ss_pred HHHHHHHHHHHHHHHH-CCCEEec-CCCCC----------eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCC-----CCC
Q 010008 368 NKVVSNCRALASRLVE-LGYKLVS-GGSDN----------HLVLVDLRPMGIDGARVEKILDMASITLNKNS-----VPG 430 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~-~G~~v~~-~gt~~----------~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~-----~Pg 430 (520)
++..++++.+++.|++ .++..+. ++..+ .++.+++.. +.+...+.+.|+..+|.++.+. .|.
T Consensus 263 ~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 263 KAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 8888899999999987 4664443 33221 255556542 3344556677777777776542 132
Q ss_pred CCC-----------C--CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 431 DKS-----------A--LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 431 ~~~-----------~--~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
... . ..++-||+|.. -|+.+.+.+-+.+++..
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvG--------lE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVG--------LEGTEALWADLEQALAA 386 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHH
Confidence 110 1 11457899865 35677777777777653
No 178
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.86 E-value=1.8e-19 Score=190.83 Aligned_cols=300 Identities=17% Similarity=0.174 Sum_probs=194.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---------CCCCCEEEEcCCCCCcccccccccccc
Q 010008 136 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKR 206 (520)
Q Consensus 136 ~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---------l~pGD~Vl~~~~~~~ghls~g~~~~~~ 206 (520)
...++| +.+++++|.+. .+.++||++|+.+++.++ ++|||+|++++++|.+...
T Consensus 64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~-------- 126 (438)
T PRK15407 64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN-------- 126 (438)
T ss_pred hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------
Confidence 356676 67888999874 355688999999888876 5899999999988755421
Q ss_pred ccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc
Q 010008 207 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA 286 (520)
Q Consensus 207 ~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~ 286 (520)
.+...|. +++.++++++++.+|++++++.+++ ++|+|++.++ ++...|+++|.++|+++|++||+|++|+.|....
T Consensus 127 ~v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~ 202 (438)
T PRK15407 127 PIIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD 202 (438)
T ss_pred HHHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC
Confidence 2334454 7777778767789999999999987 8999988643 2336799999999999999999999999998766
Q ss_pred cccCCCCCcccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCCC--------------------------
Q 010008 287 SVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-------------------------- 338 (520)
Q Consensus 287 ~~~~~p~~~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~-------------------------- 338 (520)
+..... ..|+.++|+| |.+....||+++++++ ++.+++......|
T Consensus 203 g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (438)
T PRK15407 203 GRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPF 275 (438)
T ss_pred Ceeeec--cCceEEEeCCCCCCccccCceEEEECCH-----HHHHHHHHHHHhCcccccccccccccccccccccccccc
Confidence 532221 3588888887 6576556899999986 4444322110000
Q ss_pred ---------CCCC-ChH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-C-CEEec--CCCC-C-eeEEEE
Q 010008 339 ---------LQGG-PHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G-YKLVS--GGSD-N-HLVLVD 401 (520)
Q Consensus 339 ---------~~g~-p~~-~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G-~~v~~--~gt~-~-~~~~vd 401 (520)
..|. ..+ ...||++ +.++ ..+++..++.+++++.+.+.|.+. | +.+.. .+.. + +.+.+-
T Consensus 276 ~~~~~~~~~~~G~n~rmsel~AAig--~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~ 351 (438)
T PRK15407 276 GYDHKYTYSHLGYNLKITDMQAAIG--LAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPIT 351 (438)
T ss_pred cccccccccccccccCccHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEE
Confidence 0010 011 1233332 3332 345677788888889899999763 3 22221 1221 1 222233
Q ss_pred ecC-CCCCHHHHHHHHhhcCeEEcCCCC-CCCC-CCCC----------CC----EEE-EccCCccccCCCHHHHHHHHHH
Q 010008 402 LRP-MGIDGARVEKILDMASITLNKNSV-PGDK-SALV----------PG----GIR-IGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 402 ~~~-~g~~~~~~~~~L~~~gI~v~~~~~-Pg~~-~~~~----------~~----giR-ig~~~~tt~g~~~~d~~~la~~ 463 (520)
+.. .+.+.+++.+.|.+.||.++..+. |-+. +.+. |. .-| |++|.. .+++++|++++++.
T Consensus 352 ~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~--~~l~~~~v~~i~~~ 429 (438)
T PRK15407 352 VKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVY--PGLTEEMLDYVIEK 429 (438)
T ss_pred ECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCC--CCCCHHHHHHHHHH
Confidence 322 245678899999999998765432 2221 1000 00 001 233322 35889999999999
Q ss_pred HHHHHH
Q 010008 464 IHEGVE 469 (520)
Q Consensus 464 i~~~l~ 469 (520)
|+++++
T Consensus 430 i~~~~~ 435 (438)
T PRK15407 430 IEEFFG 435 (438)
T ss_pred HHHHHh
Confidence 998774
No 179
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=4.9e-20 Score=192.75 Aligned_cols=289 Identities=18% Similarity=0.204 Sum_probs=187.4
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +++++++|.+. .+.+.||+.|+.+++.++++|||+|++.++.|++++... ...+...|
T Consensus 57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~----~~~~~~~G 123 (391)
T TIGR01328 57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL----EHALTKFG 123 (391)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH----HHHHhcCC
Confidence 345677888 67899999986 355689999999999999999999999998877553211 01122234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++++ |++++++++++ ++|+|++..++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 124 ~--~~~~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~ 189 (391)
T TIGR01328 124 I--QVDFINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-----T 189 (391)
T ss_pred e--EEEEECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-----C
Confidence 3 55555442 78999999987 89999999888886 78999999999999999999999876543 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.++. ++|++++|++|+++|+. ||+++.++ ++.+++.........|+......+++ +++.+ ......
T Consensus 190 ~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~~~~~~~~~g~~l~~~~a~l--~l~~L--~tl~~r 259 (391)
T TIGR01328 190 NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIRMVGIKDMTGSVISPFDAWL--ILRGL--KTLNIR 259 (391)
T ss_pred CchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHHHHHHHhCCCCCCCcHHHHH--HHhCc--CcHHHH
Confidence 3344 79999999999997654 68888776 66655543211111222122222322 22322 234566
Q ss_pred HHHHHHHHHHHHHHHHH-CCCE-EecCCCC---------------CeeEEEEecCCCCCHHHHHHHHhhcCe---EEcCC
Q 010008 367 QNKVVSNCRALASRLVE-LGYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASI---TLNKN 426 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~-~G~~-v~~~gt~---------------~~~~~vd~~~~g~~~~~~~~~L~~~gI---~v~~~ 426 (520)
.++..+|++.+++.|++ .++. +..++-. +.++.++++ + +.+.+.++++...+ .++.+
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~--~-~~~~~~~f~~~l~~~~~~~s~G 336 (391)
T TIGR01328 260 MKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK--G-GFAGAKKLLNNLKLIRLAVSLG 336 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHHhCCcceEecCCC
Confidence 78889999999999987 3453 3333321 224455553 2 23445555555444 33332
Q ss_pred C------CCCCCC--C----------CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 427 S------VPGDKS--A----------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 427 ~------~Pg~~~--~----------~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
. .|...+ . ..++-||++.. -||.+.+.+-|.+++.
T Consensus 337 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~ 389 (391)
T TIGR01328 337 DAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG--------LEDADDLIADLKQALD 389 (391)
T ss_pred CCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHHHh
Confidence 1 122110 0 11346888754 3678877777777764
No 180
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.86 E-value=2.1e-19 Score=187.31 Aligned_cols=319 Identities=13% Similarity=0.083 Sum_probs=200.0
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHD 184 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pGD 184 (520)
++.-++++...+..... ++..+..+++| +++++++|.+. .+.++||++|+.+++.++ ++|||
T Consensus 10 ~~~~~~~~~~~l~~~~~--------~g~~~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd 72 (375)
T PRK11706 10 VGTELDYIQQAMSSGKL--------CGDGGFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGD 72 (375)
T ss_pred CHHHHHHHHHHHHcCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCC
Confidence 34445566655554331 22224456666 67888899864 244567779988777766 79999
Q ss_pred EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHH
Q 010008 185 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 264 (520)
Q Consensus 185 ~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ 264 (520)
+|++++++|.+.. ..+...|. +++.++++++++.+|++++++++++ ++|+|++.++ ++...|+++|.+
T Consensus 73 ~Viv~~~t~~~~~--------~~~~~~G~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~~-~G~~~~~~~i~~ 140 (375)
T PRK11706 73 EVIMPSYTFVSTA--------NAFVLRGA--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVHY-AGVACEMDTIMA 140 (375)
T ss_pred EEEECCCCcHHHH--------HHHHHcCC--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeCC-CCCccCHHHHHH
Confidence 9999998775442 13344565 7788888876778999999999988 8999987643 445789999999
Q ss_pred HHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccC--cccCCCCceEEEeeCCCcchhhHHHhhcccCCCC---
Q 010008 265 IADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG--- 338 (520)
Q Consensus 265 ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~--- 338 (520)
+|+++|++||+|++|+.|....+. ++. ..|+.++|+| |+++...||+++++++ ++.+++......+
T Consensus 141 la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~~~g~~~ 212 (375)
T PRK11706 141 LAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP-----ALIERAEIIREKGTNR 212 (375)
T ss_pred HHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH-----HHHHHHHHHHHcCCCc
Confidence 999999999999999888643332 222 4688889988 9986556677777664 5554332211100
Q ss_pred --------------CCCC-Ch-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC---C-CEEe--cCCC--C
Q 010008 339 --------------LQGG-PH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGGS--D 394 (520)
Q Consensus 339 --------------~~g~-p~-~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~---G-~~v~--~~gt--~ 394 (520)
..|. .. ....|++. +.++ ..+++..++..++++.+.+.|.+. | +.+. .++. .
T Consensus 213 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 288 (375)
T PRK11706 213 SQFFRGQVDKYTWVDIGSSYLPSELQAAYL--WAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHN 288 (375)
T ss_pred chhhccCCCcceeeecccccCcCHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCcee
Confidence 0111 11 12333332 2222 234556666777777888888653 2 3322 1111 2
Q ss_pred CeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCC-CCC---------CC----EEE-EccCCccccCCCHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS-ALV---------PG----GIR-IGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~-~~~---------~~----giR-ig~~~~tt~g~~~~d~~~ 459 (520)
.+++++.+. .+.+.+++.+.|.++||.++..+.|.+.. .+. +. .=| +++|.. ..++++|+++
T Consensus 289 ~~~~~~~~~-~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~--~~l~~~~~~~ 365 (375)
T PRK11706 289 AHMFYIKLR-DLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLF--YNLTDVEQRT 365 (375)
T ss_pred eEEEEEEEC-CcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCC--CCCCHHHHHH
Confidence 334455443 23567889999999999987655454321 100 00 001 233322 3578999999
Q ss_pred HHHHHHHHH
Q 010008 460 IADFIHEGV 468 (520)
Q Consensus 460 la~~i~~~l 468 (520)
+++.|++.+
T Consensus 366 i~~~i~~~~ 374 (375)
T PRK11706 366 VIDTILEFF 374 (375)
T ss_pred HHHHHHHHh
Confidence 999998754
No 181
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=4.9e-20 Score=192.65 Aligned_cols=291 Identities=16% Similarity=0.136 Sum_probs=187.6
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +.+++++|.+. .|.+.||+.|+.+++.++++|||+|++.++.|++.+.... ......|
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~----~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLE----VLEEKFM 125 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH----HHHhhcC
Confidence 445567777 67889999864 4666899999999999999999999999987765532110 0001112
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
++...++ ..|++++++++++ ++|+|++.+++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 126 --i~~~~~~------~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~-----~ 191 (386)
T PRK06767 126 --ITHSFCD------METEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-----Q 191 (386)
T ss_pred --eEEEEeC------CCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2322221 3488999999987 89999999999987 78999999999999999999999765433 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|++|++.|+. ||++++++ ++..++....... .|+......+++ ++..+ ......
T Consensus 192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~------~~i~~~~~~~~~~-~g~~~~~~~a~l--~~~~L--~tl~~r 260 (386)
T PRK06767 192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKT------RALAEKIRPMRKD-IGGIMAPFDAWL--LLRGL--KTLAVR 260 (386)
T ss_pred CchhcCCcEEEecCcceecCCCCceeEEEEeCh------HHHHHHHHHHHHH-hCCCCCHHHHHH--HHcCC--CcHHHH
Confidence 3343 78999999999997764 69999988 4433322111111 122111111221 22222 123566
Q ss_pred HHHHHHHHHHHHHHHHH-CCCEEec-CCC---------CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCC------CC
Q 010008 367 QNKVVSNCRALASRLVE-LGYKLVS-GGS---------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNS------VP 429 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~-~G~~v~~-~gt---------~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~------~P 429 (520)
.++..+|++.+++.|++ .++..+. ++. .+.++.+++.....+...+.+.|+..++.++.+. .|
T Consensus 261 ~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 340 (386)
T PRK06767 261 MDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHP 340 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCC
Confidence 78889999999999988 4776433 211 1345666664211123456677777888776542 13
Q ss_pred CCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 430 GDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 430 g~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
...+ ...++-||++.. -||.+.+.+-|.+++.
T Consensus 341 ~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 341 ATMTHAAIPAELRQEMGIYDNLIRLSVG--------LESWEDIVSDLEQALK 384 (386)
T ss_pred CccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 2110 012356888754 3677777777777664
No 182
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.85 E-value=4e-20 Score=194.69 Aligned_cols=286 Identities=17% Similarity=0.229 Sum_probs=176.0
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCceeee--cCChH-HHHHHHHH---hhCCCCCEEEEcCCCCCccccccccccccccc
Q 010008 138 DELETLCQKRALAAFN--LDENKWGVNVQ--PLSGS-PANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS 209 (520)
Q Consensus 138 d~lE~~a~~~~~~lfg--~~~~~~~~~V~--~~sGs-~A~~~~l~---all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~ 209 (520)
.++.+...+++.+..+ ++++ +|. .++|+ +|+.+++. ++++|||+|++++|.|.++.. .+.
T Consensus 75 ~~lR~aia~~~~~~~~~~~~~~----~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~~ 142 (404)
T PTZ00376 75 QSFIEAAQKLLFGEASYALAEK----RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IFK 142 (404)
T ss_pred HHHHHHHHHHhcCCCccccccC----eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHH
Confidence 4555444555544433 3444 333 35555 67666554 678999999999998865532 334
Q ss_pred cccceEEEEEcccCC-CCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhc
Q 010008 210 GTSIYFESMPYRLDE-STGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHIS 281 (520)
Q Consensus 210 ~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~ 281 (520)
..|. +++.+++.+ +++.+|++.+++.++.. ++++++++.|+||+ .. ++++|.++|++||+++|+|++ |.
T Consensus 143 ~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~ 219 (404)
T PTZ00376 143 SAGL--NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA-YQ 219 (404)
T ss_pred HcCC--ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh-hc
Confidence 5565 667777732 35789999999988642 34677778999997 33 467788889999999999998 55
Q ss_pred ccccccc---cCC--CCC-cc--cEEEeccCccc--CCCCceEEE---eeCCCcchhhHHH----hhcccCCCCCCCCCh
Q 010008 282 GLVAASV---VAD--PFK-YC--DVVTTTTHKSL--RGPRGGMIF---FKKDPVLGVELES----AINNAVFPGLQGGPH 344 (520)
Q Consensus 282 gli~~~~---~~~--p~~-~a--Div~~S~hK~l--~GprgG~I~---~~~~~~~~~~l~~----~i~~~~~p~~~g~p~ 344 (520)
++.+.+. ... .+. .. -+++.|++|++ +|+|.||++ .++ ++.+ .+.+.....+.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~ 293 (404)
T PTZ00376 220 GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK------EEAANVLSQLKLIIRPMYSSPPI 293 (404)
T ss_pred CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH------HHHHHHHHHHHHHHhhhcCCCch
Confidence 5554321 110 011 11 27789999986 699999984 344 4333 222211111222222
Q ss_pred HHHHHHHHHHHHHhc--C---chhHHHHHHHHHHHHHHHHHHHHCC----CEEecCCCCCeeEEEEecCCCCCHHHHHHH
Q 010008 345 NHTIGGLAVCLKHAQ--S---PEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKI 415 (520)
Q Consensus 345 ~~~iaala~al~~~~--~---~~~~~~~~~i~~na~~l~~~L~~~G----~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~ 415 (520)
..+ .+.+.+|+.-. . ...++..+++.++++.+.+.|.+.+ +.+..+ ..+.++|+++ +.+.++.+
T Consensus 294 ~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p-~gg~f~~~~~-----~~~~~~~L 366 (404)
T PTZ00376 294 HGA-RIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIIN-QIGMFSFTGL-----TKEQVERL 366 (404)
T ss_pred HHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccc-CceEEEecCC-----CHHHHHHH
Confidence 222 22233342100 0 0123345677788899999998865 333332 2345566554 34556677
Q ss_pred HhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 416 LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 416 L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++++||.+ +|| + ||++.. .+.++++++++.|++++.
T Consensus 367 ~~~~~v~v----~p~--------~-Ris~~~-----~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 367 IEKYHIYL----LDN--------G-RISVAG-----LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred HHhCCEee----cCC--------C-eEEEec-----cCHHhHHHHHHHHHHHHh
Confidence 77789998 554 2 998743 447999999999998765
No 183
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=3e-19 Score=183.41 Aligned_cols=303 Identities=17% Similarity=0.165 Sum_probs=201.0
Q ss_pred hccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC---CCCCCCceeeecCC
Q 010008 93 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS 167 (520)
Q Consensus 93 ~~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg---~~~~~~~~~V~~~s 167 (520)
.+.|+|..+||+ +|+.+++++...+.......||. . ....+. +.+++.++ ++++ +|.+++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~-----~--~~~~Lr----~aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYD-----S--PDEELI----EKILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-----C--ChHHHH----HHHHHHhCCCCCCcc----eEEEcC
Confidence 366889888875 68899999877654321111332 1 133444 44555565 6665 677799
Q ss_pred hH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 168 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 168 Gs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
|+ +++..++.++ |.|++++|+|.++. ..+...|. +++.++++. ++.+|.+. + . ++++|
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~~-~~~~~~~~----~-~-~~~~i 142 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYR--------IFAKAVGA--KFLEVPLTK-DLRIPEVN----V-G-EGDVV 142 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHH--------HHHHHcCC--eEEEecCCC-cCCCChhH----c-c-CCCEE
Confidence 98 8999888877 78999998775442 13445565 666777763 45555332 2 2 57899
Q ss_pred EEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cc-cEEEeccCccc--CCCCceEEEeeCC
Q 010008 247 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMIFFKKD 320 (520)
Q Consensus 247 i~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~a-Div~~S~hK~l--~GprgG~I~~~~~ 320 (520)
+++.|+||+ ..+.+++.+++ +++++||+|+++ ..+. .......+. +. -+++.|++|++ +|+|.||+++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y-~~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAY-YEFH-GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECch-hhhc-CCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 999999997 78899999998 579999999984 3332 111111111 22 27779999986 599999999987
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEE
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 400 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~v 400 (520)
++.+.+.....+ .+.....+.++ ..+++. ...+++..+.+.++++.+.+.|.+.|+.+..+ +..++|+
T Consensus 219 -----~~~~~l~~~~~~--~~~~~~~q~a~-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~g~f~~~ 286 (335)
T PRK14808 219 -----KFIDAYNRVRLP--FNVSYVSQMFA-KVALDH--REIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFI 286 (335)
T ss_pred -----HHHHHHHHhcCC--CCCCHHHHHHH-HHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCeEEEE
Confidence 677777554322 22223333333 334442 12346667777888888999999888886654 3456677
Q ss_pred EecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
.+. +.+..++.+.|.++||.|.. + ..++||++. +.++++++.+.|.+
T Consensus 287 ~l~--~~~~~~~~~~l~~~Gi~V~~--~--------~~~~Risi~-------~~~~~~~~~~~l~~ 333 (335)
T PRK14808 287 FME--KEEKERLLEHLRAKNIAVRS--F--------REGVRITIG-------KREENDMILKELEV 333 (335)
T ss_pred eCC--CccHHHHHHHHHHCCeEEEE--C--------CCCeEEecC-------CHHHHHHHHHHHHh
Confidence 664 23456788889999999962 1 257999864 26899999888764
No 184
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.85 E-value=5e-19 Score=184.25 Aligned_cols=313 Identities=18% Similarity=0.134 Sum_probs=193.2
Q ss_pred hHHHHHHHhhhhhccC------CCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHh
Q 010008 106 SRAVMEAVGSCLTNKY------SEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 178 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y------~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~a 178 (520)
++.+.+++...+.... ..|..|.|...| .+..+++| +.+++++|.+. .+..+||+.||..+...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~-----~l~~~sG~~a~~~~~~~ 90 (370)
T PRK05937 20 SDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE-----AFIVPSGYMANLGLCAH 90 (370)
T ss_pred CHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe-----EEEECChHHHHHHHHHH
Confidence 4555555544443211 133445554443 34455554 78999999965 25578999999877777
Q ss_pred hCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCC
Q 010008 179 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAY 253 (520)
Q Consensus 179 ll~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~ 253 (520)
+.++||.|+.....|++.+... ..... ..+.++ .+|+++++++++.. ++++|++++.++
T Consensus 91 ~~~~~d~ii~d~~~H~sv~~~~--------~~~~~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s 154 (370)
T PRK05937 91 LSSVTDYVLWDEQVHISVVYSL--------SVISG--WHQSFR------HNDLDHLESLLESCRQRSFGRIFIFVCSVYS 154 (370)
T ss_pred hCCCCCEEEEEhhhhHHHHHHH--------HHcCC--ceEEec------CCCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence 7788898887777665543211 11111 112232 46899999988742 244566665544
Q ss_pred C--CCCCHHHHHHHHHHhCCEEEEechhhccccccccc----CCCCCcccEEEeccCcccCCCCceEEEeeCCCcchhhH
Q 010008 254 P--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 327 (520)
Q Consensus 254 p--~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~----~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l 327 (520)
+ ...|+++|+++|+++|+++++|++|+.|.+..... ...+...++++.|++|.+ ||.|+.+++.+ +.
T Consensus 155 ~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~------~~ 227 (370)
T PRK05937 155 FKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSS------EV 227 (370)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCH------HH
Confidence 4 38899999999999999999999999886643321 111122346778999976 67776666765 43
Q ss_pred HHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCC
Q 010008 328 ESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMG 406 (520)
Q Consensus 328 ~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g 406 (520)
...+.....|. ..++.+...++++..+++.+...+ ....+++.++++++.+.|...+ .+ ....+.+. +
T Consensus 228 ~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~-----~~---~~~~i~~~--~ 296 (370)
T PRK05937 228 KQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA-----PG---CVQPIFLP--G 296 (370)
T ss_pred HHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-----CC---CEEEEEeC--C
Confidence 33332111111 233345556777777887664333 3445666666666666654321 11 11112232 2
Q ss_pred CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 407 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 407 ~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+...+.+.|.+.||.++....| ..+.||++++..+| ++|++++++.|+++++..
T Consensus 297 ~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 297 ISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVLATYLEKY 351 (370)
T ss_pred hhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHh
Confidence 34577888999999998643222 23579999887765 899999999999987643
No 185
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.7e-19 Score=188.62 Aligned_cols=285 Identities=20% Similarity=0.218 Sum_probs=184.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccce
Q 010008 135 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 214 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~ 214 (520)
+...++| +++++++|.+.+ +...||++|+.+++.++++|||+|+++++.|++.+.... ......|
T Consensus 61 p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~g-- 125 (388)
T PRK07811 61 PTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWG-- 125 (388)
T ss_pred ccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCC--
Confidence 4466777 678899999863 445899999999999999999999999998876432110 0111123
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCC
Q 010008 215 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 292 (520)
Q Consensus 215 ~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p 292 (520)
.++..++ ..|++++++++++ ++|+|+++.|+||+ ..|+++|+++|+++|++||+|+++..+.. ..|
T Consensus 126 i~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~p 193 (388)
T PRK07811 126 VEYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQP 193 (388)
T ss_pred eEEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CCc
Confidence 2444433 2589999999987 89999999999886 78999999999999999999999766533 234
Q ss_pred CC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCC-CCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 293 FK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 293 ~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
+. ++|++++|++|++.||. +|+++++++ ++.+++...... +...+|. .+ +.++..+ ..+..+.
T Consensus 194 ~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~~~~~~g~~~s~~----~a-~l~~~~L--~tl~~R~ 261 (388)
T PRK07811 194 LALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAFLQNGAGAVPGPF----DA-YLTLRGL--KTLAVRM 261 (388)
T ss_pred hhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHHHHHhcCCCCCHH----HH-HHHHhcc--CcHHHHH
Confidence 44 79999999999998874 699988764 565554332111 1111111 11 1223322 2345677
Q ss_pred HHHHHHHHHHHHHHHH-CCCE-EecCCCC---------------CeeEEEEecCCCCCHHHHHHHHhhcCe---EEcCCC
Q 010008 368 NKVVSNCRALASRLVE-LGYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASI---TLNKNS 427 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~-~G~~-v~~~gt~---------------~~~~~vd~~~~g~~~~~~~~~L~~~gI---~v~~~~ 427 (520)
++..+|+..+++.|++ .++. +..++-. +.++.+++. + +.+.+.++++...+ .++.+.
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~~~~~~s~G~ 338 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA--G-GEEAARDFCARTKVFTLAESLGG 338 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC--C-CHHHHHHHHHhCCcceeeccCCC
Confidence 8888999999999987 3553 3333211 224555553 2 23445555555443 443321
Q ss_pred ------CCCCC--C-------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 428 ------VPGDK--S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 428 ------~Pg~~--~-------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.|... . ...++-||++.. -||.+.+.+-|.+++.
T Consensus 339 ~~sl~~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~ 387 (388)
T PRK07811 339 VESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG--------IEDVADLLADLEQALG 387 (388)
T ss_pred CcceEeCCcccCcccCCHhhcCCCCCEEEEEeC--------CCCHHHHHHHHHHHhh
Confidence 12111 0 112456898864 3677777777766653
No 186
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.85 E-value=5e-19 Score=185.84 Aligned_cols=325 Identities=15% Similarity=0.153 Sum_probs=214.2
Q ss_pred EecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 010008 98 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 172 (520)
Q Consensus 98 Liasen~~----~~~V~ea~~s~l~~~y~~G~p~~ryy~g~-~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~ 172 (520)
...|.+|. .|.++++....+ .+|..|..+.|...|+ .+..++| +.+++++|.+.. +..+||..||
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~a-----ll~sSGy~AN 175 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKEDC-----LVCPTGFAAN 175 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCcE-----EEECChHHHH
Confidence 34577775 688999987765 5676677777766654 4455677 678999999873 5568999999
Q ss_pred HHHHHhhC--------------CCCCEEEEcCCCCCccccccccccccccccccc--eEEEEEcccCCCCCCCCHHHHHH
Q 010008 173 FEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDMLEK 236 (520)
Q Consensus 173 ~~~l~all--------------~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~--~~~~v~~~~d~~~~~iD~d~le~ 236 (520)
..++.+|. ..+|.|+.-...|.+.+ .| +.+... ..+.+.|+. -|+++|++
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~-dG-------~~ls~~~~~a~~~~f~H------ND~~~Le~ 241 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASII-DG-------VRLAERQGNVEVFVYRH------CDMYHLNS 241 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHH-HH-------HHhccccCCceEEEeCC------CCHHHHHH
Confidence 99998872 45566766555554322 12 112210 124444443 48899998
Q ss_pred HhhhcC--CcEEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc---cccC-CCC-CcccEEEeccCccc
Q 010008 237 TAILFR--PKLIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSL 307 (520)
Q Consensus 237 ~i~~~~--pklIi~~--~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~~-~p~-~~aDiv~~S~hK~l 307 (520)
+++..+ .++|++. ++..+...|+++|.++|+++|++|++|+||..|.+.. |... ..+ +..||+++|++|.+
T Consensus 242 ~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~ 321 (476)
T PLN02955 242 LLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA 321 (476)
T ss_pred HHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch
Confidence 886532 3455554 4445558899999999999999999999998886643 2111 111 24689999999997
Q ss_pred CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCC-hHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCC
Q 010008 308 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 386 (520)
Q Consensus 308 ~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p-~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~ 386 (520)
|-+||++++++ ++.+.+....-+...++. .....++...+++.+... ...++++.+|.+++.+. .|+
T Consensus 322 -G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~G~ 389 (476)
T PLN02955 322 -GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---SGV 389 (476)
T ss_pred -hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---cCC
Confidence 67899999988 566666543223333332 333444444567665433 34567888888887773 366
Q ss_pred EEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 387 KLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 387 ~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
.+ .++++.+-+... .....+.+.|.+.||.|+.-..|-- |.+...+||++.+. ++++|++++++.|.+
T Consensus 390 ~~-----~sPI~pI~ig~~-~~a~~~~~~L~~~Gi~v~~i~yPtV--P~g~~rLRi~lsA~----Ht~edId~lv~~L~~ 457 (476)
T PLN02955 390 DI-----SSPIISLVVGNQ-EKALKASRYLLKSGFHVMAIRPPTV--PPNSCRLRVTLSAA----HTTEDVKKLITALSS 457 (476)
T ss_pred CC-----CCCEEEEEeCCH-HHHHHHHHHHHHCCCEEEEECCCCC--CCCCceEEEeeCCC----CCHHHHHHHHHHHHH
Confidence 53 145554444321 1345578889999999976444432 33456799987654 669999999999988
Q ss_pred HHHH
Q 010008 467 GVEI 470 (520)
Q Consensus 467 ~l~~ 470 (520)
+...
T Consensus 458 ~~~~ 461 (476)
T PLN02955 458 CLDF 461 (476)
T ss_pred HHhh
Confidence 7654
No 187
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.85 E-value=1.2e-18 Score=167.75 Aligned_cols=332 Identities=17% Similarity=0.140 Sum_probs=230.7
Q ss_pred ceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 010008 96 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 175 (520)
Q Consensus 96 i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~ 175 (520)
.-|+++..-+|++|++||..- ..|+.. .+++.. -+...+-++..|....+.. .|.++||+.+..++
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~-----~lgh~s------Pe~~qI-m~~v~egikyVFkT~n~~t--f~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRP-----SLGHMS------PEFVQI-MDEVLEGIKYVFKTANAQT--FVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCC-----ccccCC------HHHHHH-HHHHHHHHHHHhccCCCce--EEEecCCcchHHHH
Confidence 367788888999999999643 334433 233333 3345577888998876543 57788999999999
Q ss_pred HHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-
Q 010008 176 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 254 (520)
Q Consensus 176 l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p- 254 (520)
+..++.|||.|++... |.+++.+.. ..+..|..++++ +.+ ......+++|++.+..++|+++++......
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~ra~D---~~~r~ga~V~~v--~~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST 155 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQRAAD---CARRYGAEVDVV--EAD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST 155 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHHHHH---HHHhhCceeeEE--ecC-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence 9999999999998764 233222211 123446544444 344 346789999999999999999998754333
Q ss_pred -CCCC-HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHH
Q 010008 255 -RDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 329 (520)
Q Consensus 255 -~~~d-~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~ 329 (520)
-..| ++.+.++|++|++++++|...+.|.... -++ ++|+..+..+|.|.+|.| +.|..++. ..+
T Consensus 156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F-----~mDewgVDvaytgSQKaL~aP~GLsiisfS~k------a~~ 224 (385)
T KOG2862|consen 156 GVLQDLLAISGELCHKHEALLLVDTVASLGGTEF-----EMDEWGVDVAYTGSQKALGAPAGLSIISFSDK------ALE 224 (385)
T ss_pred cccchHHHHHHHHhhcCCeEEEEechhhcCCccc-----eehhhcccEEEecchhhcCCCCCcceeecCHH------HHH
Confidence 3667 6677899999999999998755553311 112 799999999999999999 77776662 222
Q ss_pred hhcc---------------cCCCC-------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCE
Q 010008 330 AINN---------------AVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 387 (520)
Q Consensus 330 ~i~~---------------~~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~ 387 (520)
+++. ..|.+ +..+|....+.++.+||..+.+++.++..++.+++++.+...|++.|++
T Consensus 225 ~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 225 AIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ 304 (385)
T ss_pred HHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 2211 11222 1346778889999999999888889999999999999999999999988
Q ss_pred EecCCC---CCeeEEEEecCCCCCHHHHHHHHhh-cCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHH
Q 010008 388 LVSGGS---DNHLVLVDLRPMGIDGARVEKILDM-ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 388 v~~~gt---~~~~~~vd~~~~g~~~~~~~~~L~~-~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~ 463 (520)
...... ......+.+ +.++|+.++...+.. .++.+..+ -++..+..+|||+...+ -+.+-|+.+.+.
T Consensus 305 ~fv~~e~~rlptvttv~v-p~gvDw~dVv~~~~~~~~vei~gg-----lg~~~gKv~RIGl~gcn---a~~e~i~~v~~l 375 (385)
T KOG2862|consen 305 LFVVDEELRLPTVTTVKV-PYGVDWKDVVAYAMSHYVVEIGGG-----LGPTVGKVFRIGLLGCN---ANVEYIDNVVEL 375 (385)
T ss_pred ceecChhhccCcceeeec-CCCCCHHHHHHHHHHhcCEEeccc-----cCCCcccEEEEEEeecc---CCcHHHHHHHHH
Confidence 765211 111112333 578899887766654 57776432 24456778999976544 356788888888
Q ss_pred HHHHHHH
Q 010008 464 IHEGVEI 470 (520)
Q Consensus 464 i~~~l~~ 470 (520)
++.++..
T Consensus 376 l~~alq~ 382 (385)
T KOG2862|consen 376 LKLALQR 382 (385)
T ss_pred HHHHHhh
Confidence 8877764
No 188
>PLN03032 serine decarboxylase; Provisional
Probab=99.85 E-value=7.3e-19 Score=181.51 Aligned_cols=266 Identities=17% Similarity=0.134 Sum_probs=186.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC--CC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--~p 182 (520)
....+++++...+.+.+ |.|...+..|.. ..++|+.+++++++++|++++++. -+.+++||+||+.++.+.. .+
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~-G~fTsGGTEaNl~al~~ar~~~~ 110 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYW-GYITTCGTEGNLHGILVGREVFP 110 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCC-EEEeCchHHHHHHHHHHHHHhCC
Confidence 45567888888877655 777765433333 567888999999999999876531 1334566799998777542 35
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCC--CCCCCC
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA--YPRDFD 258 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~s~--~p~~~d 258 (520)
+++|+++..+|.+.. +.....|.. +..+++| +++.+|+++|++++++. +|.+|+++..+ .+...|
T Consensus 111 ~~~vi~s~~~H~Sv~--------kaa~~lg~~--~~~V~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp 179 (374)
T PLN03032 111 DGILYASRESHYSVF--------KAARMYRME--AVKVPTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD 179 (374)
T ss_pred CcEEEeCCCceeHHH--------HHHHHcCCC--CeEeeeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC
Confidence 668887776654332 233444543 3345566 46899999999999763 46777775333 344889
Q ss_pred HHHHHHHHHHhC-----CEEEEechhhcccccccccCC--CC-CcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHH
Q 010008 259 YPRMRQIADAVG-----ALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 329 (520)
Q Consensus 259 ~~~i~~ia~~~g-----~~li~D~Ah~~gli~~~~~~~--p~-~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~ 329 (520)
+++|+++|+++| +|+++|+|+..+.+....... .+ .++|.++.|+||++..|.| |+++++++ +.+
T Consensus 180 i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~------~~~ 253 (374)
T PLN03032 180 LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK------HVK 253 (374)
T ss_pred HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch------hhH
Confidence 999999999996 599999998777664321111 12 2589999999998766999 99999883 333
Q ss_pred hhccc------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC
Q 010008 330 AINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 391 (520)
Q Consensus 330 ~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~ 391 (520)
.+... ..++..|+.+-...+++..+|+.....+|.+..++..++++++.+.|.+.|++++..
T Consensus 254 ~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 321 (374)
T PLN03032 254 ALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLN 321 (374)
T ss_pred hhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEC
Confidence 33210 112345665555566777788887777889999999999999999999989887653
No 189
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.85 E-value=5.1e-19 Score=182.25 Aligned_cols=324 Identities=15% Similarity=0.125 Sum_probs=213.4
Q ss_pred CChHHHHHHHhhhhhccCCCCC--CCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGL--PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~--p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~ 181 (520)
..|..|++++.+++.+....|. +. ......++.+.++ .+++.++++|+.+.+ +.+.+...|||.|+.+++.+++.
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~-~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~ 78 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVME-ISHRSKEFEAVAN-EAESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLA 78 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccc-cCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCC
Confidence 4688999999998875332221 11 1133455666665 577899999998432 22445556688999999999999
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD 258 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d 258 (520)
+||+++++.... +.|.+.. .....|. ...+..+-. +....+|+++++ +++ ++++|.+.+..+++ ..+
T Consensus 79 ~~~~~l~i~~G~---fg~r~~~---~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~v~~th~ETstGv~~~ 148 (349)
T TIGR01364 79 EGKVADYIVTGA---WSKKAAK---EAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISE-DAAYVHYCANETIHGVEFR 148 (349)
T ss_pred CCCeEEEEECCH---HHHHHHH---HHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCC-CCCEEEEcCCCCcccEecc
Confidence 999999886533 3333311 2233454 344442211 022356777665 334 78999887655554 333
Q ss_pred HHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccC--
Q 010008 259 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV-- 335 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~-- 335 (520)
++++.+++++++|+++++|....++ ...|++++|.||+| ||.| |+++.+++ ..+++....
T Consensus 149 -----~l~~~~~~l~iVDavss~g~~~id~-----~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~~~~~~~~~~~ 211 (349)
T TIGR01364 149 -----ELPDVKNAPLVADMSSNILSRPIDV-----SKFGLIYAGAQKNI-GPAGLTVVIVRKD------LLGRASRITPS 211 (349)
T ss_pred -----eecccCCCeEEEEccccccCccCCH-----HHccEEEEeccccc-CCCceEEEEECHH------HHhhcccCCCC
Confidence 6777789999999999888764332 23579999999988 6988 99999883 333222110
Q ss_pred ---------CCCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHC-CCEEecC--CCCC-eeEEEE
Q 010008 336 ---------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLVSG--GSDN-HLVLVD 401 (520)
Q Consensus 336 ---------~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~--gt~~-~~~~vd 401 (520)
.....|+|+.+.+.++..||+.+... ++++..++..+.++++.+.|++. |+..... ...+ ..+.+.
T Consensus 212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~ 291 (349)
T TIGR01364 212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFT 291 (349)
T ss_pred cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEe
Confidence 01124799999999999999998877 68999999999999999999997 6644421 1112 223333
Q ss_pred ecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 402 LRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 402 ~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+....+ ..++...+.+.||.+ .+|.. ..+.+|+|...+++ ++|++++.++|+++++
T Consensus 292 ~~~~~~-~~~~~~~~~~~Gi~~----~~~~~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~ 347 (349)
T TIGR01364 292 LGNEEL-EKRFLKEAEERGLVS----LKGHR---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK 347 (349)
T ss_pred cCChhH-hHHHHHHHHHCCCcc----cCCcc---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 332222 245556778899944 23322 24689999876655 8999999999998654
No 190
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.85 E-value=3.3e-19 Score=184.51 Aligned_cols=328 Identities=15% Similarity=0.118 Sum_probs=203.7
Q ss_pred ceEecCCCCChHHHHHHHhhhhhccCCCCCCCCC-CCCc---chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 010008 96 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 171 (520)
Q Consensus 96 i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~r-yy~g---~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A 171 (520)
++++++...+|+.|++|+..++.+ |. .++.- |..+ .++.+.++ .+++.++++||++.++. +.+...|||+|
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~~-vvf~~gs~T~a 75 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNYK-VLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCchHH
Confidence 467888899999999999998754 21 22211 1112 34455555 68899999999843221 22333447799
Q ss_pred HHHHHHhhCC---CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCC-HHHHHHHhhhcCCcEEE
Q 010008 172 NFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLII 247 (520)
Q Consensus 172 ~~~~l~all~---pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD-~d~le~~i~~~~pklIi 247 (520)
+.+++.+++. +||.|+.- .+.|.+.. .....|..++.+. .+.+....+ .+..+..+++ ++|+|.
T Consensus 76 ~~~~~~~l~~~~~~~~~i~~g------~~~~~~~~---~a~~~g~~~~~~~--~~~~g~~~~~~~~~~~~~~~-~~~lV~ 143 (355)
T cd00611 76 FAAVPLNLLGDKGTADYVVTG------AWSAKAAK---EAKRYGGVVVIVA--AKEEGKYTKIPDVETWDLAP-DAAYVH 143 (355)
T ss_pred HHHHHHhcCCCCCeEEEEECC------HHHHHHHH---HHHhcCCCcEEEe--cccccCCCCCCCHhhcCCCC-CCCEEE
Confidence 9999999987 55555431 12221100 0122344333333 332111224 2222333555 899998
Q ss_pred EcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhh
Q 010008 248 AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 326 (520)
Q Consensus 248 ~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~ 326 (520)
+.+..+.+-..+ .++++.+|+++++|++|++|....++. ..|++++|.||+| ||.| |+++++++
T Consensus 144 ~~h~~t~tG~~~---~~i~~~~g~~~~VDa~qs~g~~~idv~-----~~~~~~ss~~K~l-GP~G~g~l~~~~~------ 208 (355)
T cd00611 144 YCSNETIHGVEF---DEVPDTGGVPLVADMSSNILSRPIDVS-----KFGVIYAGAQKNL-GPAGVTVVIVRKD------ 208 (355)
T ss_pred EeCCcccccEEc---ceecccCCCeEEEEccccccCCCCCHH-----HhCEEEeeccccc-CCCceEEEEECHH------
Confidence 876655541112 255666999999999999987744332 2456777799976 7998 99999883
Q ss_pred HHHhhccc-----------CCCCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHC-CCE-EecC-
Q 010008 327 LESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYK-LVSG- 391 (520)
Q Consensus 327 l~~~i~~~-----------~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~-G~~-v~~~- 391 (520)
+.+++... ......|+|+.+.+.++..|++.+... +++...++..+.++++.+.|.+. |+. ....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~ 288 (355)
T cd00611 209 LLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDK 288 (355)
T ss_pred HHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCH
Confidence 33322211 001125899999999999999998877 68888999999999999999986 852 2111
Q ss_pred CCCCeeEEEEecCCCC-CHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~-~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..... .++.+...++ ...+....+.+.|+.+ .+++. ..+.+|+|+..+++ ++|++++.++++++
T Consensus 289 ~~rs~-~vvsf~~~~~~l~~~~~~~~~r~G~~~----~~~~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~ 353 (355)
T cd00611 289 RARSR-MNVPFRLGKEELEKEFLKEAEAAGMIG----LKGHR---SVGGIRASIYNALS----LEGVQALADFMKEF 353 (355)
T ss_pred HHcCc-eEEEEEcCChhhhHHHHHHHHHCCCcc----cCCCc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 11121 2233332232 1133435677799964 23332 23689999987765 89999999998874
No 191
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.6e-19 Score=188.15 Aligned_cols=290 Identities=16% Similarity=0.148 Sum_probs=188.0
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ++++++.|.+. .+...+|++|+.+++.++++|||+|+++++.|++.+.... .....
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~------~~~~~ 115 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN------TRANK 115 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH------HHHhc
Confidence 456677787 67889999753 2444566699999999999999999999998876532110 00111
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.++++..++ ..|++++++++++ +||+|+++.|+||+ ..|+++|.++|+++|+++++|+++..++. .
T Consensus 116 ~gi~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-----~ 183 (388)
T PRK08861 116 GDFKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-----Q 183 (388)
T ss_pred CCeEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 124555543 2589999999987 89999999999986 88999999999999999999999876643 3
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+. ||+++++++ ++.+++..... ..|......-+. ..++.+. -+..+
T Consensus 184 ~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~--~~G~~~~p~~a~--l~~rgl~--Tl~lR 252 (388)
T PRK08861 184 KPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGN--CIGATGTPFDSY--MTLRGIR--TLGAR 252 (388)
T ss_pred CCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHh--ccCCCCChHHHH--HHHhcCC--CHHHH
Confidence 4555 79999999999999875 698888764 55555542211 112211111111 2233332 34567
Q ss_pred HHHHHHHHHHHHHHHHHC-CC-EEecCCCC---------------CeeEEEEecCCCCCHHHHHHHHhhcC---eEEcCC
Q 010008 367 QNKVVSNCRALASRLVEL-GY-KLVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMAS---ITLNKN 426 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~-~v~~~gt~---------------~~~~~vd~~~~g~~~~~~~~~L~~~g---I~v~~~ 426 (520)
+++..+|+..+++.|++. .+ +|..++-. +.++.+++. + +.+.+.++++... +.++.+
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~--~-~~~~~~~f~~~l~l~~~~~s~G 329 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA--G-SFEQLKVFVKALALFSLAESLG 329 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC--C-CHHHHHHHHhcCCcceEccCCC
Confidence 889999999999999884 33 33333211 224445553 2 3344555555443 344432
Q ss_pred C------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 427 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 427 ~------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
. .|-..+ ...++-||++.. -||.+.+.+-|.++++..
T Consensus 330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG--------lE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 330 GVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG--------LEDAQDLIADLDQAFAKA 384 (388)
T ss_pred CCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHHHHHH
Confidence 1 121110 012356898754 367888888888877643
No 192
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.85 E-value=1.3e-19 Score=190.07 Aligned_cols=215 Identities=20% Similarity=0.198 Sum_probs=148.9
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++..+.+| +++++++|++++ . .+.||+.|+..++.++++|||+|+++++.|+++..... ......|.
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~~----~-~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~ 130 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAEDA----R-ATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE----TLLPRYGI 130 (398)
T ss_pred CchHHHHH----HHHHHHhCCCee----e-EecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH----HHHhhcCe
Confidence 45567777 678899999874 2 35799999998888899999999999988876532110 00112233
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
++..++ .+|++++++++++ +||+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. ..
T Consensus 131 --~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~-----~~ 196 (398)
T PRK07504 131 --ESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLF-----QK 196 (398)
T ss_pred --EEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 554532 3789999999987 89999999999986 78999999999999999999999876643 23
Q ss_pred CCC-cccEEEeccCcccCCC--C-ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
++. ++|++++|+||++.|+ + ||+++++++ .+.+++..... ..|.......+++ ++..+ ..+....
T Consensus 197 ~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-----~i~~~~~~~~~--~~g~~~s~~~A~~--~l~~L--~tl~~R~ 265 (398)
T PRK07504 197 PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-----WIEEHLQDYFR--HTGPSLSPFNAWT--LLKGL--ETLPVRV 265 (398)
T ss_pred chhhCCCEEEeeccccccCCccceEEEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHHH--HHhcc--chHHHHH
Confidence 444 7999999999999654 4 478888773 23222321111 1122111222222 23332 2346677
Q ss_pred HHHHHHHHHHHHHHHHC-CC
Q 010008 368 NKVVSNCRALASRLVEL-GY 386 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~-G~ 386 (520)
++..+|++.+++.|.+. ++
T Consensus 266 ~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCc
Confidence 88889999999999873 44
No 193
>PRK04311 selenocysteine synthase; Provisional
Probab=99.85 E-value=8.5e-19 Score=185.78 Aligned_cols=319 Identities=18% Similarity=0.208 Sum_probs=201.1
Q ss_pred CCCCChHHHHHHHhhhhhccCCC-CC---CCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHH
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSE-GL---PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 176 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~-G~---p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l 176 (520)
+-.++|+.+++++...+.+ |.. .| .+.+ | +..+.+| +.+++++|++. .+.++||+.|+..++
T Consensus 94 g~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~---g-~r~~~~e----~~lA~l~Gae~-----a~vv~sgtaAl~l~l 159 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARG-YSNLEYDLATGKR---G-SRDRALA----ALLCALTGAED-----ALVVNNNAAAVLLAL 159 (464)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccccccchhhccc---c-hHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHH
Confidence 4457899999999888754 321 11 1111 2 2234444 78899999985 244688999998888
Q ss_pred HhhCCCCCEEEEcCCCC---CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 010008 177 TAILKPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 253 (520)
Q Consensus 177 ~all~pGD~Vl~~~~~~---~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 253 (520)
.+ +.+||+|++++.++ ||.+... ..+...|. +++.++.+ ...+++++++++++ +|++|++.+++|
T Consensus 160 ~~-l~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN 227 (464)
T PRK04311 160 NA-LAAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGTT---NRTHLRDYEQAINE-NTALLLKVHTSN 227 (464)
T ss_pred HH-hCCCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCC
Confidence 65 58999999987543 2221110 11223454 66665543 34689999999988 899998876655
Q ss_pred C------CCCCHHHHHHHHHHhCCEEEEechhhccccc----cc--ccC---CCCC-cccEEEeccCcccCCCCceEEEe
Q 010008 254 P------RDFDYPRMRQIADAVGALLMMDMAHISGLVA----AS--VVA---DPFK-YCDVVTTTTHKSLRGPRGGMIFF 317 (520)
Q Consensus 254 p------~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~----~~--~~~---~p~~-~aDiv~~S~hK~l~GprgG~I~~ 317 (520)
+ ...|+++|+++|+++|+++++|.+ +|.+. .+ ..+ .++. ++|++++|+||+|+||.+|+|++
T Consensus 228 ~~i~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g 305 (464)
T PRK04311 228 YRIEGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVG 305 (464)
T ss_pred ccccccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEE
Confidence 4 267999999999999999999985 33321 11 111 2233 79999999999999999999999
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-----------hHHHHHHHHHHHHHHHHHHHHC--
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVEL-- 384 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~na~~l~~~L~~~-- 384 (520)
++ ++.+++.+....-.. ...-..++++...+.....++ +....++..++++.+++.|...
T Consensus 306 ~~------~li~~l~~~~~~r~l-r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~ 378 (464)
T PRK04311 306 KK------ELIARLKKHPLKRAL-RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALG 378 (464)
T ss_pred cH------HHHHHHhhchhHHHH-hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccC
Confidence 87 666665531100000 001124555555555333221 1122377778999999999874
Q ss_pred -CC--EEec------CCCCC----eeEEEEecCCCCCHHHHHHHHhhcC--eEEcCCCCCCCCCCCCCCEEEEccCCccc
Q 010008 385 -GY--KLVS------GGSDN----HLVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTT 449 (520)
Q Consensus 385 -G~--~v~~------~gt~~----~~~~vd~~~~g~~~~~~~~~L~~~g--I~v~~~~~Pg~~~~~~~~giRig~~~~tt 449 (520)
++ .++. +|+.. .-+.+.+.+.+.+...+++.|++.. |.++. ..+.+.+- -
T Consensus 379 ~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~----------~~~~~~ld-----~ 443 (464)
T PRK04311 379 AAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI----------EDGRLLLD-----L 443 (464)
T ss_pred CCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEE-----e
Confidence 23 3442 22211 1123455555678889999998744 44421 12344443 2
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 010008 450 RGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 450 ~g~~~~d~~~la~~i~~~l~ 469 (520)
|.+.++|++.+++.+.+++.
T Consensus 444 r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 444 RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CcCCHHHHHHHHHHHHHHhh
Confidence 45778999999999988753
No 194
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.85 E-value=3.4e-19 Score=184.59 Aligned_cols=327 Identities=12% Similarity=0.031 Sum_probs=209.7
Q ss_pred ceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHH
Q 010008 96 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 175 (520)
Q Consensus 96 i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~ 175 (520)
..+++++..+++.|++++......-. +++ +.+.++.+.++ .+++.+++++|++.+ +.+-+...|||.++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~---hr~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAASLF---GTS---HRQAPVKNLVG-RVREGLAELFSLPDG-YEVILGNGGATAFWDAA 76 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcccc---ccC---cCChHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchhHHHHHH
Confidence 45778888899999999874210000 112 22345666666 578999999999543 21222235578999999
Q ss_pred HHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 010008 176 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 255 (520)
Q Consensus 176 l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~ 255 (520)
+.+++.+ +.+++..-.++..+.|... .....+ ....+. .+ ....++. .+.+ ++|+|++.+..+.+
T Consensus 77 ~~~l~~~-~~l~i~~G~~~~~~~~~a~----~~~~~~-~~~~~~--~~-~~~~~~~-----~~~~-~~~lV~~~h~et~t 141 (361)
T TIGR01366 77 TFGLIEK-KSLHLSFGEFSSKFAKAVK----LAPWLG-EPIIVT--AD-PGSAPEP-----QADP-GVDVIAWAHNETST 141 (361)
T ss_pred HHhcccc-cccEEecCHHHHHHHHHHH----hhhccC-CceEEe--cC-CCCCCCC-----ccCC-CCCEEEEcccCCcc
Confidence 9998743 2222222223222211110 000112 123333 32 2333443 2344 79999888554443
Q ss_pred --CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc
Q 010008 256 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 256 --~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~ 332 (520)
..|+++| ++++|+++++|+++++|....++. .+|++++|.||+|++|.| ++++.+++ +.+++.
T Consensus 142 G~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-----~~D~~~~s~~K~lg~~~Gl~~~~~s~~------~~~~~~ 207 (361)
T TIGR01366 142 GVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-----ETDVYYFAPQKNFASDGGLWLAIMSPA------ALERIE 207 (361)
T ss_pred ceecccccc---cccCCCeEEEEcCccccCCCCCHH-----HCCEEEEEchhhcCCCCceEEEEECHH------HHhhhh
Confidence 7788776 688999999999999887644332 379999999999987766 44455662 322222
Q ss_pred c--------------------cCCCCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHCC-CEEec
Q 010008 333 N--------------------AVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVS 390 (520)
Q Consensus 333 ~--------------------~~~p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~G-~~v~~ 390 (520)
. ..-.+..++|+.+.+.++..+++.+... +++...++..+.++++.++|.+.+ ++++.
T Consensus 208 ~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~ 287 (361)
T TIGR01366 208 AIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFV 287 (361)
T ss_pred cccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 1 1112446788888898999999988766 477778899999999999999876 55543
Q ss_pred CCC--CC-eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 391 GGS--DN-HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 391 ~gt--~~-~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.+. .+ ....+.+ +.+++.+++...|++.||.+..+. .....+.+|||+..+++ ++|+++++++|+++
T Consensus 288 ~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~-----~~l~~~~vRis~~~~~t----~~di~~l~~al~~~ 357 (361)
T TIGR01366 288 TDPGKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPY-----RKLGRNQLRVAMFPAID----PDDVEALTECVDWV 357 (361)
T ss_pred CChhhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCc-----cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHH
Confidence 211 11 1234455 467888899999999999984321 12334579999987765 89999999999987
Q ss_pred HH
Q 010008 468 VE 469 (520)
Q Consensus 468 l~ 469 (520)
++
T Consensus 358 ~~ 359 (361)
T TIGR01366 358 VE 359 (361)
T ss_pred Hh
Confidence 65
No 195
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=4.6e-19 Score=182.19 Aligned_cols=306 Identities=17% Similarity=0.126 Sum_probs=199.6
Q ss_pred ccceEecCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 94 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 94 ~~i~Liasen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
+.|+|..++|+ +|+.+++++.+.+......+||.. | ...++ +.+++++|++++ +|.+++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----g---~~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI----T---SDPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCC----C---HHHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 45788777765 578899998877643222345421 2 22333 667788898876 56678998 7
Q ss_pred HHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 171 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 171 A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
++..++.++ +||+|++++|.|+.+. ......|. ++++++++ +++.+|++.+++.. . ++|++++++
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~-~-~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYS--------FYAKLNGI--PVIDVPLK-EDFTIDGERIAEKA-K-NASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHH--------HHHHHcCC--eEEEeecC-CCCCcCHHHHHHhc-c-CCCEEEEeC
Confidence 877776665 8999999999775321 12234454 66666666 35789999998865 3 689998999
Q ss_pred CCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cc-cEEEeccCccc--CCCCceEEEeeCCCcch
Q 010008 251 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 251 s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~a-Div~~S~hK~l--~GprgG~I~~~~~~~~~ 324 (520)
|+||+ ..+.++|.++++ +|+++|+|+++. .+.... ....+. .. -+++.|++|++ +|.|.||+++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 99997 788999999995 699999999954 333111 000011 11 27789999986 789999999987
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecC
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 404 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~ 404 (520)
++.+.+.....+. +. +.....+...+++. ...+.+..+.+.++++.+.+.|.+.. ..+ ...++|+++.
T Consensus 221 -~~i~~~~~~~~~~--~~-~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~--~~~~~~~~~~- 288 (337)
T PRK03967 221 -EIIDALYRIKPPF--SL-NILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYA---YPS--DANFLLLKLD- 288 (337)
T ss_pred -HHHHHHHhhcCCC--CC-CHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCc---CCC--CCcEEEEhHH-
Confidence 6777666543322 22 22233333333432 12334555666777778888886542 222 3455666542
Q ss_pred CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 405 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 405 ~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+.+.|.+.||.+... ++ ...+++||++. +.++.+++.+.|+++..
T Consensus 289 -------~~~~l~~~gi~v~~~--~~----~~~~~~Ri~~~-------~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 289 -------AYDYLLENGIVVRKL--SG----RLEGHIRVTVG-------KREENDEFIKALKEIKE 333 (337)
T ss_pred -------HHHHHHHCCEEEEeC--CC----CCCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence 557777889999642 21 23568999864 25788999999987654
No 196
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.7e-19 Score=189.31 Aligned_cols=291 Identities=16% Similarity=0.198 Sum_probs=187.9
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++...++| +.+++++|.+. .+.+.||+.|+.+++.++++|||+|+++++.|++.+.... ..+...|.
T Consensus 63 ~p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~ 129 (400)
T PRK06234 63 NPTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYGV 129 (400)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCCe
Confidence 34566777 67888999763 3566889999999999999999999999988765432110 11233454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHh--CCEEEEechhhccccccccc
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVV 289 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~--g~~li~D~Ah~~gli~~~~~ 289 (520)
+++.++. .|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++ |+++++|+++..+..
T Consensus 130 --~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~----- 195 (400)
T PRK06234 130 --EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI----- 195 (400)
T ss_pred --EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc-----
Confidence 5556543 289999999987 89999999999987 78999999999997 999999999766533
Q ss_pred CCCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 290 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 290 ~~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
..++. ++|++++|++|++.|+. +|++++++ ++.+++.........|.......+++ .+..+ ..+..
T Consensus 196 ~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~~~~~~~~~g~~l~p~~a~l--~~~~l--~tl~~ 265 (400)
T PRK06234 196 QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVKLFGIKDMTGSVIGPFEAFL--IIRGM--KTLQI 265 (400)
T ss_pred CCchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHHHHHHHHhcCCCCCHHHHHH--HHhcc--CcHHH
Confidence 23444 68999999999997643 59999987 56665542111111222122222222 22322 23456
Q ss_pred HHHHHHHHHHHHHHHHHHC-CC-EEecCC---------------CCCeeEEEEecCCCC-CHHHHHHHHhhcCeEEcCCC
Q 010008 366 YQNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNS 427 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~-G~-~v~~~g---------------t~~~~~~vd~~~~g~-~~~~~~~~L~~~gI~v~~~~ 427 (520)
..++..+|++.+++.|++. .+ .+..++ ..++++.+++.. +. ....+.+.|+-.++.++.+.
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~~~~~~s~G~ 344 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKLATLAVSLGD 344 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCcceEeccCCC
Confidence 7788889999999999873 33 222222 123455556542 11 12335555666666666542
Q ss_pred ------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 428 ------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 428 ------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.|...+ ...++-||++.. -||.+.+.+-+.+++..
T Consensus 345 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG--------lE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 345 AETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG--------LEDVDDIIADLKQALDL 397 (400)
T ss_pred CCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC--------CCCHHHHHHHHHHHHHH
Confidence 132110 012356898864 36777777777777753
No 197
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.84 E-value=8.5e-19 Score=185.34 Aligned_cols=340 Identities=14% Similarity=0.083 Sum_probs=199.6
Q ss_pred ccceEecCCCC-C---hHHHHHHHhhhhhcc-CC---CCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC--CCCCCceee
Q 010008 94 KSLELIASENF-T---SRAVMEAVGSCLTNK-YS---EGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNV 163 (520)
Q Consensus 94 ~~i~Liasen~-~---~~~V~ea~~s~l~~~-y~---~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~--~~~~~~~~V 163 (520)
+.|+|..+... . .+.+.+++...+... +. .+|+. ......+.+...+++.+.+|. +++ +|
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~LR~aia~~~~~~~g~~v~~~----~I 100 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDG------PQGKDELIEALAALLNERYGWNISPQ----NI 100 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCC------CCCCHHHHHHHHHHHHHHhCCCCChh----hE
Confidence 45788755432 2 235666766555432 10 12332 121234555555778777775 444 67
Q ss_pred ecCChH-HHHHHHHHhhCC-----CCCEEEE-cCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHH
Q 010008 164 QPLSGS-PANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDML 234 (520)
Q Consensus 164 ~~~sGs-~A~~~~l~all~-----pGD~Vl~-~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~--~~~iD~d~l 234 (520)
.+++|+ +|+..++.++++ |||.|++ .+|+|.++...... . . .+.+....++ +++.+ .+.+|++++
T Consensus 101 ~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~--~-~-~~~~~~~~~~--~~~~~~~~~~~d~~~l 174 (416)
T PRK09440 101 ALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE--E-D-LFVSYRPNIE--LLPEGQFKYHVDFEHL 174 (416)
T ss_pred EEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc--c-C-ceeecccccc--cccccccccCCCHHHc
Confidence 789999 899999999985 6999999 69988765321100 0 0 0111111222 23322 257999998
Q ss_pred HHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCC--CC-CcccEEEeccCcc
Q 010008 235 EKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF-KYCDVVTTTTHKS 306 (520)
Q Consensus 235 e~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~-~~aDiv~~S~hK~ 306 (520)
+ +.. ++++++++.|+||+ ..+ +++|.++|+++|++||+|+++.. ......... +. ..--|++.|++|+
T Consensus 175 ~--~~~-~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~~~~~~~~~~~~~~~~vI~~~SfSK~ 250 (416)
T PRK09440 175 H--IDE-DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-PFPGIIFSEATPLWNPNIILCMSLSKL 250 (416)
T ss_pred c--cCC-CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-cCCCcchhhcCccccCCeEEEeccccc
Confidence 7 344 78999999999997 444 66788889999999999999632 111000000 10 0112778999997
Q ss_pred -cCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHH-----HHHHHHHHHHHHHHH
Q 010008 307 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV-----YQNKVVSNCRALASR 380 (520)
Q Consensus 307 -l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~-----~~~~i~~na~~l~~~ 380 (520)
++|.|.||+++++ ++.+++.........+.+...+.++ +.++. ..++.. ..+.+.++++.+.+.
T Consensus 251 ~~pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~---~~~~~~~~~~~~~~~~~~r~~~~~~~ 320 (416)
T PRK09440 251 GLPGVRCGIVIADE------EIIEALSNMNGIISLAPGRLGPAIA-AEMIE---SGDLLRLSETVIRPFYRQKVQLAIAL 320 (416)
T ss_pred CCCcceEEEEeCCH------HHHHHHHHHHHHhccCCCcHHHHHH-HHHhc---cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4889999999987 6666665433222222223333332 33333 222322 233345556666677
Q ss_pred HHH----CCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCC--CCCCC--CCCCEEEEccCCccccCC
Q 010008 381 LVE----LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVP--GDKSA--LVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 381 L~~----~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~P--g~~~~--~~~~giRig~~~~tt~g~ 452 (520)
|.+ .++.+..+ ..+.++|+++...+++..++.+.|.++||.+..+... +.... ...+++||++..
T Consensus 321 L~~~l~~~~~~~~~p-~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~------ 393 (416)
T PRK09440 321 LRRYLPDEPCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ------ 393 (416)
T ss_pred HHHhcccCCeEEecC-CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC------
Confidence 755 24554333 2356778888643456677778888999999543211 11000 013589998642
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l~~ 470 (520)
+++++++..+.|.+++..
T Consensus 394 ~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 394 DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 378999999988887754
No 198
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.84 E-value=1.8e-20 Score=193.64 Aligned_cols=265 Identities=19% Similarity=0.258 Sum_probs=178.1
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
+++.+++.||++... ..++|| .+|.++++++++|||+|++...+|-+.+ | .+.+.|. .+++++.
T Consensus 71 Ae~~aA~~fGAd~t~-----flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~-~-------alil~ga--~Pvyi~p 135 (417)
T PF01276_consen 71 AEELAARAFGADKTF-----FLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY-N-------ALILSGA--IPVYIPP 135 (417)
T ss_dssp HHHHHHHHHTESEEE-----EESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH-H-------HHHHHTE--EEEEEEE
T ss_pred HHHHHHHhcCCCeEE-----EEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH-H-------HHHHcCC--eEEEecC
Confidence 447889999999752 347888 8999999999999999999988776543 1 3445565 5555433
Q ss_pred -CCCC---CCCCH-----HHHHHHhhhcC----CcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccc
Q 010008 223 -DEST---GLVDY-----DMLEKTAILFR----PKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 288 (520)
Q Consensus 223 -d~~~---~~iD~-----d~le~~i~~~~----pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~ 288 (520)
+++. +.+++ +.|+++++++. ++++++.+|+|-+ ..|+++|.++|+++|++|++|+||++.+.+...
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~l 215 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPL 215 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGG
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCC
Confidence 2222 24677 99999998732 3458888998877 789999999999999999999999988766654
Q ss_pred cCCCCC-ccc-------EEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc
Q 010008 289 VADPFK-YCD-------VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 359 (520)
Q Consensus 289 ~~~p~~-~aD-------iv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~ 359 (520)
..+.+. ++| +++.|+||++++... ++|..+.+... -.++++....-....+|+...+|++.+|.+.+.
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v---~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~ 292 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIV---DHERVNEALSMHQTTSPSYPLMASLDVARAQME 292 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCT---THHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred ccchhhccCccccccceeeeechhhcccccccceEEEecCCCcc---cHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence 445555 799 999999999988766 78888875200 123444432222356789999999999988773
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH----CCCEEecCC----C------------------------CCeeEEEEe-----
Q 010008 360 SPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGG----S------------------------DNHLVLVDL----- 402 (520)
Q Consensus 360 ~~~~~~~~~~i~~na~~l~~~L~~----~G~~v~~~g----t------------------------~~~~~~vd~----- 402 (520)
..+.++..++.+++++.+++.|++ .++++..+. . |.-=+.+.+
T Consensus 293 ~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~ 372 (417)
T PF01276_consen 293 EEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDA 372 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTEEEEE-STBET
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcEEEEEccCcCc
Confidence 345577888889999999999943 466665421 0 111123443
Q ss_pred ----cCCCCCHHHHHHHHhhcCeEEcCC
Q 010008 403 ----RPMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 403 ----~~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
...|+++..+.+.|++.||.+.+.
T Consensus 373 ~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 373 DGELSELGIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp TSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred CCcccccCCCHHHHHHHHHHcCCEEEec
Confidence 456889999999999999999764
No 199
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=2.9e-19 Score=186.47 Aligned_cols=289 Identities=18% Similarity=0.206 Sum_probs=184.2
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .+...||++|+..++.++++|||+|+++++.|++.+.... ......+
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~g 116 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGC 116 (386)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhCC
Confidence 345566777 67888998642 3555777799999999999999999999998876432110 0001112
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.++..+ + ..|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 117 --i~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-----~ 182 (386)
T PRK08045 117 --YRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-----Q 182 (386)
T ss_pred --eEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 233332 2 3689999999987 89999999999997 78999999999999999999999765532 3
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
.|+. ++|++++|+||++.|+. +|+++++++ ++.+++.... ..+...+|. ... .+++.+. .+..
T Consensus 183 ~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~~~p~-~~~----l~~rgl~--tl~~ 250 (386)
T PRK08045 183 NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGAF-DSY----LLLRGLR--TLVP 250 (386)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCCCCHH-HHH----HHHhhhc--cHHH
Confidence 4555 79999999999999887 488877653 5655553221 112212211 111 1222222 2567
Q ss_pred HHHHHHHHHHHHHHHHHHC-CC-EEecCCCC---------------CeeEEEEecCCCCCHHHHHHHHhhcC---eEEcC
Q 010008 366 YQNKVVSNCRALASRLVEL-GY-KLVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMAS---ITLNK 425 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~-G~-~v~~~gt~---------------~~~~~vd~~~~g~~~~~~~~~L~~~g---I~v~~ 425 (520)
.+++..+|+..+++.|++. .+ +|..++-. +.++.+++. + +.+.+.++++... +.++.
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~~~~~~s~ 327 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD--G-DEQTLRRFLGGLSLFTLAESL 327 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec--C-cHHHHHHHHHhccceeEeccC
Confidence 7899999999999999884 34 23333211 124445553 2 2344455555433 33333
Q ss_pred CC------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 426 NS------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 426 ~~------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+. .|-..+ ...++-||++.. -||.+.+.+-|.+++...
T Consensus 328 G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 328 GGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG--------IEDGEDLIADLENGFRAA 383 (386)
T ss_pred CCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeC--------cCCHHHHHHHHHHHHHHh
Confidence 21 121100 012456898864 367888888787777643
No 200
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=2.9e-19 Score=187.01 Aligned_cols=242 Identities=24% Similarity=0.248 Sum_probs=159.8
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCC
Q 010008 103 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 182 (520)
Q Consensus 103 n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~p 182 (520)
.+..+.+.+++...... ..|++..|| +++..+++| +++++++|.+. .+.++||++|+.+++.++++|
T Consensus 33 ~~~~~~~~~~~~~~~~~--~~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al~~~ 99 (390)
T PRK08133 33 SFVFESAAEAAARFAGE--EPGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMALLQA 99 (390)
T ss_pred CcccCCHHHHHHhhcCC--cCCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCC
Confidence 34444455544433221 123444444 345566666 67889999875 255678889999999999999
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHH
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYP 260 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~ 260 (520)
||+|++.++.|++.+.... ..+...|. +++.++++ |++++++++++ ++|+|++..++||+ ..|++
T Consensus 100 Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~--~v~~vd~~------d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl~ 166 (390)
T PRK08133 100 GDHVVSSRSLFGSTVSLFE----KIFARFGI--ETTFVDLT------DLDAWRAAVRP-NTKLFFLETPSNPLTELADIA 166 (390)
T ss_pred CCEEEEccCcchhHHHHHH----HHHHHcCc--EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCCcCCHH
Confidence 9999999988876542110 11222344 56665442 78999999987 89999999888886 78999
Q ss_pred HHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcccCCC--C-ceEEEeeCCCcchhhHHHhhcccCC
Q 010008 261 RMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVF 336 (520)
Q Consensus 261 ~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~l~~~i~~~~~ 336 (520)
+|.++|+++|+++++|+++..+.. ..|+. ++|++++|+||++.|+ + ||+|++++ ++.+++.....
T Consensus 167 ~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~------~~~~~~~~~~~ 235 (390)
T PRK08133 167 ALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSK------ELMEEVFGFLR 235 (390)
T ss_pred HHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCH------HHHHHHHHHHH
Confidence 999999999999999999765433 23444 7899999999999654 3 48888876 44443322111
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 337 PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 337 p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
. .|. ......+. .+++.+ ..+..+.++..+|+..+++.|++. ++.
T Consensus 236 ~--~g~-~~~~~~a~-~~l~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 236 T--AGP-TLSPFNAW-VFLKGL--ETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred H--hCC-CCCHHHHH-HHHccc--chHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 0 111 11122211 123322 245667788889999999999884 554
No 201
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=5e-19 Score=184.42 Aligned_cols=288 Identities=20% Similarity=0.188 Sum_probs=188.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+++| +++++++|.+. .+.++||+.|+.+++. +++|||+|++.++.|++...... ......|
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG 110 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence 455567777 67889999854 3556889988887665 88999999999988765431110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.+++ .|++++++++++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 111 ~--~v~~vd~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 V--VVVHVDT------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred c--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 5555443 389999999987 89999999888886 78999999999999999999999866643 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCC-CCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
.|+. ++|++++|+||++.||. +|+++++++ ++.+++..... .+....| .-+.+ .+..+ ..+..
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~~~~~G~~~~~---~~a~l--~~~~l--~tl~~ 244 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFLQNSTGSGLAP---FDCWL--LLRGI--KTLAI 244 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHHHHhcCCcCCH---HHHHH--HHccC--CCHHH
Confidence 3444 79999999999998864 699988764 55555543222 1211111 11211 12222 34567
Q ss_pred HHHHHHHHHHHHHHHHHHC-CC-EEecCCC---------------CCeeEEEEecCCCCC-HHHHHHHHhhcCeEEcCCC
Q 010008 366 YQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGID-GARVEKILDMASITLNKNS 427 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~vd~~~~g~~-~~~~~~~L~~~gI~v~~~~ 427 (520)
+.++..+|+..+++.|++. .+ ++..++- ...++.+++ .+.. ...+.+.|+..+|.++.+.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~--~~~~~~~~~~~~L~~~~i~~s~G~ 322 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET--GSVALSKRLVEATKLFSITVSFGS 322 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE--CCHHHHHHHHHhCcCcccccCCCC
Confidence 7888999999999999873 22 2322211 123444555 2333 3456677777888887653
Q ss_pred C------CCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 428 V------PGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 428 ~------Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+ |-..+ ...++-||+|.. -||.+.+.+-|.+++..
T Consensus 323 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 323 VNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG--------IEDVDDLISDLDIAFVT 375 (378)
T ss_pred CCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence 1 32110 012456888764 36788888888777764
No 202
>PLN02242 methionine gamma-lyase
Probab=99.84 E-value=3.9e-19 Score=187.17 Aligned_cols=224 Identities=18% Similarity=0.183 Sum_probs=158.1
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++...++| +++++++|.+.. +...||++|+.+++.++++|||+|++.++.|+++...... ......|
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~~-----l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~---~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEAA-----YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAH---FLPRKCN 141 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCeE-----EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHH---hhhhccC
Confidence 567778888 678899999862 3457889999999999999999999999877655211000 0011234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.++. .|++++++++++.++|+|++.+++||+ ..|+++|+++|+++|++|++|++|. .+..
T Consensus 142 ~--~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~----- 207 (418)
T PLN02242 142 I--TTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVL----- 207 (418)
T ss_pred c--eEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCC-----
Confidence 3 4444332 389999999977359999999999987 7799999999999999999999974 3221
Q ss_pred CCCC-cccEEEeccCcccCC--CC-ceEEEeeCCCcchhhHHHhhcccCC--CCCCCCChHHHHHHHHHHHHHhcCchhH
Q 010008 291 DPFK-YCDVVTTTTHKSLRG--PR-GGMIFFKKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFK 364 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~G--pr-gG~I~~~~~~~~~~~l~~~i~~~~~--p~~~g~p~~~~iaala~al~~~~~~~~~ 364 (520)
.+.. ++|++++|++|++.| ++ ||++++++ ++.+++..... ....|.+...+.|++. ++ . ...+.
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~~-~--l~tl~ 277 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-SE-R--LPHLS 277 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-Hc-C--CCcHH
Confidence 2222 689999999999854 34 69999877 56555543211 1123444444444432 11 1 12445
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEecCC
Q 010008 365 VYQNKVVSNCRALASRLVELGYKLVSGG 392 (520)
Q Consensus 365 ~~~~~i~~na~~l~~~L~~~G~~v~~~g 392 (520)
..+++..+|++.+++.|++.++++..++
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~~~V~yP~ 305 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELGLKVIYPG 305 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEECCC
Confidence 6778899999999999999888887554
No 203
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.83 E-value=4.6e-19 Score=185.98 Aligned_cols=217 Identities=17% Similarity=0.189 Sum_probs=152.6
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +++++++|.+. .+.+.||+.|+..++.++++|||+|++.+..|++.+.. ....+...|
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~----~~~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVV----CNEILPRWG 134 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHH----HHHHHHHcC
Confidence 445577787 67889999874 46678999999999999999999999988766554321 111122335
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.++. .|++++++++++ ++|+|++..|+||+ ..|+++|+++|+++|++|++|++|..+...
T Consensus 135 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~----- 200 (403)
T PRK07810 135 V--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ----- 200 (403)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 4 5555442 389999999988 89999999998887 789999999999999999999998766442
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|.. ||+|+++++ .+.+++..... ..|.......+++ +++.+ ..+..+
T Consensus 201 ~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-----~~~~~l~~~~~--~~g~~~s~~~a~l--~l~~L--~tl~~R 269 (403)
T PRK07810 201 RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMR--HTGPALSAFNAWV--LLKGL--ETLALR 269 (403)
T ss_pred ChhhcCCcEEEccCCceecCCcCceeEEEEeChH-----HHHHHHHHHHH--HhCCCCCHHHHHH--HHhcc--CcHHHH
Confidence 2344 79999999999997643 599998873 23333332111 1122222222222 23322 235677
Q ss_pred HHHHHHHHHHHHHHHHH-CCCE
Q 010008 367 QNKVVSNCRALASRLVE-LGYK 387 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~-~G~~ 387 (520)
.++..+|+..+++.|++ .++.
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 88999999999999987 3443
No 204
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.83 E-value=8.4e-19 Score=184.20 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=151.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++...++| +++++++|+++ .|.++||+.|+.+++.++++|||+|++..+.|++.+... ...+...|.
T Consensus 64 ~p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G~ 130 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFGV 130 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCCE
Confidence 34567777 67889999875 355689999999999999999999999988776543211 011222343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
++..+++ .|++++++++++ +||+|++..++||+ ..|+++|.++|+++|+++|+|++|..+.. ..
T Consensus 131 --~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 196 (403)
T PRK07503 131 --TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----QR 196 (403)
T ss_pred --EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 5555443 378999999988 89999999888887 78999999999999999999999865532 23
Q ss_pred CCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
|+. ++|++++|++|++.|+ +||+++.++ ++.+++.........|.......+++ ++..+ ..+..+.
T Consensus 197 ~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~~~~~~~~~g~~~s~~~a~l--~l~~L--~tl~~r~ 266 (403)
T PRK07503 197 PLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIRLEGLKDMTGAVMSPFDAFL--LMRGL--KTLALRM 266 (403)
T ss_pred chhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHHhhhHHhCcCCCCCHHHHHH--HHcCc--chHHHHH
Confidence 344 7899999999999875 378888665 66666642211122232222222222 23322 2345667
Q ss_pred HHHHHHHHHHHHHHHHC-CCE
Q 010008 368 NKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~-G~~ 387 (520)
++..+|++.+.+.|.+. .+.
T Consensus 267 ~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 267 DRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 77889999999999874 443
No 205
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=7.8e-19 Score=184.28 Aligned_cols=213 Identities=23% Similarity=0.226 Sum_probs=150.4
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .|.+.||++|+.+++.++++|||+|+++++.|++...... ......|
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~----~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFN----ALAKKGH 124 (405)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHH----HHHHhcC
Confidence 345556666 67888999854 4667899999999999999999999999988875321110 0011123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.+++.++. .|++++++++++ +||+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 125 --~~v~~v~~------~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~ 190 (405)
T PRK08776 125 --FALITADL------TDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q 190 (405)
T ss_pred --cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 24444332 488999999987 89999999999886 78999999999999999999999865532 3
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
.|+. ++|++++|+||++.|+. +|+++++++ ++.+++.... ..+...+ .+.+. ..++.+ ..++.
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~~~s----~~~a~-l~~~gl--~tl~~ 258 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGLTGS----PFDAF-LTLRGL--RTLDA 258 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCCCCC----HHHHH-HHHhhh--CcHHH
Confidence 4555 78999999999998875 588888664 5666554311 1122111 11111 122222 34577
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q 010008 366 YQNKVVSNCRALASRLVEL 384 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~ 384 (520)
..++..+|+..+++.|++.
T Consensus 259 r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 259 RLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999874
No 206
>PLN02368 alanine transaminase
Probab=99.83 E-value=6.7e-19 Score=184.87 Aligned_cols=243 Identities=11% Similarity=0.039 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCCceeeecCChH-HHHHHHHHhhC-CCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs-~A~~~~l~all-~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
..++.+...+++.+.+|++ ++ +|.+|+|+ +++..++.+++ +|||+|++++|.|..+. ..+...|
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~----~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~--------~~~~~~g 176 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPE----LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS--------ATISLLG 176 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChh----hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH--------HHHHHcC
Confidence 3455556667888877854 44 67779998 89999999997 79999999999876542 1334556
Q ss_pred ceEEEEEcccCCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhc
Q 010008 213 IYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHIS 281 (520)
Q Consensus 213 ~~~~~v~~~~d~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~ 281 (520)
. ++++++++++ ++.+|++++++.+++. ++|++++++|+||+ .+ .+++|.++|+++|++||+|++ |.
T Consensus 177 ~--~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~-Y~ 253 (407)
T PLN02368 177 G--TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV-YQ 253 (407)
T ss_pred C--EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc-cc
Confidence 5 6777777654 4789999999988642 68989998999997 44 466778889999999999998 55
Q ss_pred ccccccc--cCCC------C----C-c-ccEEEeccCccc---CCCCceEEEe---eCCCcchhhHHHhhcccCCCCCCC
Q 010008 282 GLVAASV--VADP------F----K-Y-CDVVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQG 341 (520)
Q Consensus 282 gli~~~~--~~~p------~----~-~-aDiv~~S~hK~l---~GprgG~I~~---~~~~~~~~~l~~~i~~~~~p~~~g 341 (520)
.+++.+. +.+. + . + --|++.|++|++ +|+|.||+++ ++ ++.+.+.+.... ..+
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~~~~-~~~ 326 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKVASI-ALS 326 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHHhcc-cCC
Confidence 6665442 1111 0 0 1 126779999985 6999999985 44 566665553211 123
Q ss_pred CChHHHHHHHHHHHHHhc--Cch---h----HHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEec
Q 010008 342 GPHNHTIGGLAVCLKHAQ--SPE---F----KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 342 ~p~~~~iaala~al~~~~--~~~---~----~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~ 403 (520)
.+...+.++ ..+|+.-. +.. | +++.+.+.++++.+.+.|++. |+.+..+ ...+++|+++.
T Consensus 327 ~~~~~Q~aa-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P-~Gafy~~~~i~ 396 (407)
T PLN02368 327 PNVSGQIFM-GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFT-EGAMYSFPQIK 396 (407)
T ss_pred CCcHHHHHH-HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCC-CeeeEeccCCC
Confidence 333444443 33453210 001 2 235677888899999999884 8877654 23566676654
No 207
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=6.5e-19 Score=183.15 Aligned_cols=290 Identities=14% Similarity=0.089 Sum_probs=182.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ++++++.|.+. .+.+.||++|+.+++.++++|||+|+++++.|++..... .......|
T Consensus 48 gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~----~~~~~~~g 114 (377)
T TIGR01324 48 GTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC----DIVLKRMG 114 (377)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH----HHHHHhcC
Confidence 667778888 67888999864 244678889999999999999999999998775432100 00111223
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++.+ +.+++++++++ ++|+|++.+++||+ ..|+++|+++|+++|+++++|++|..|...
T Consensus 115 i--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~----- 180 (377)
T TIGR01324 115 V--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF----- 180 (377)
T ss_pred c--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-----
Confidence 3 33343221 22789998887 89999999888886 779999999999999999999999887653
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+. ||++++++ +..+++..... ..|......-+ . ..++.+. -...+
T Consensus 181 ~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~------~~~~~l~~~~~--~~G~~l~p~~a-~-~~~rgl~--tl~~R 248 (377)
T TIGR01324 181 KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA------RTWDQLREHSY--LMGQMVDADDA-Y-TTLRGLR--TLGVR 248 (377)
T ss_pred CccccCceEEEecCceeccCCCCceEEEEEeCH------HHHHHHHHHHH--HhCCCCCHHHH-H-HHHhhhh--hHHHH
Confidence 2444 79999999999998875 48888876 44444432111 11221111111 1 1222222 23456
Q ss_pred HHHHHHHHHHHHHHHHHC-CC-EEecCC---------------CCCeeEEEEecCCCC-CHHHHHHHHhhcCeEEcCCCC
Q 010008 367 QNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRPMGI-DGARVEKILDMASITLNKNSV 428 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~-~v~~~g---------------t~~~~~~vd~~~~g~-~~~~~~~~L~~~gI~v~~~~~ 428 (520)
.++..+|+..+++.|.++ .+ ++..++ ..++++.+++...+. ....+.+.|+..++.++-+.+
T Consensus 249 ~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~ 328 (377)
T TIGR01324 249 LKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGY 328 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCc
Confidence 788889999999999883 33 333332 124566666642111 123344555556666654321
Q ss_pred ------CC-CCC-------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 429 ------PG-DKS-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 429 ------Pg-~~~-------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
|. ..+ ....+-||++.. -||.+.+.+-+.++++
T Consensus 329 ~sl~~~~~~~~~~~~~~~~~~~~~liR~svG--------lE~~~dl~~dl~~al~ 375 (377)
T TIGR01324 329 ESLALCNQPELGHRPNIKRNLEGPLIRVHIG--------LENVDDLKADLKAGFE 375 (377)
T ss_pred cceeecCCCCCCHHHHHhccCCCCEEEEEeC--------CCCHHHHHHHHHHHHh
Confidence 11 000 011245888754 3677777777776664
No 208
>PRK15029 arginine decarboxylase; Provisional
Probab=99.83 E-value=8.5e-19 Score=193.29 Aligned_cols=296 Identities=15% Similarity=0.107 Sum_probs=203.2
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
+++.++++||++...+ .++|| .+|.++++++++|||+|++...+|-+.+ | .+.++|. .++++..
T Consensus 210 Aq~~aA~~fgA~~t~F-----lvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~-------al~L~ga--~Pvyl~P 274 (755)
T PRK15029 210 SEKYAARVFGADRSWS-----VVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-Q-------GLILTGA--KPVYMVP 274 (755)
T ss_pred HHHHHHHHhCCCcEEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCC--eEEEecc
Confidence 5578899999997532 36787 8999999999999999999988776554 2 3445565 5555432
Q ss_pred C-CCC---CCCC-----HHHHHHHhhhc---------CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhccc
Q 010008 223 D-EST---GLVD-----YDMLEKTAILF---------RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 283 (520)
Q Consensus 223 d-~~~---~~iD-----~d~le~~i~~~---------~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gl 283 (520)
. .+. +.++ ++.+++++..+ +|+++++.+|+|-+ ..|++.|.++|+++|++|++|+||++.+
T Consensus 275 ~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 1 122 2345 89999888653 23489999998876 7899999999999999999999999877
Q ss_pred ccccccC--CCC-------Cccc-EEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHH
Q 010008 284 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA 352 (520)
Q Consensus 284 i~~~~~~--~p~-------~~aD-iv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala 352 (520)
.+....+ +++ .++| +++.|+||+|++... .+|..+.+... .+ .++++.+..-....+|+...+|++.
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~-id-~~r~~~~l~~~qSTSPSY~LmASLD 432 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA-IN-FSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccc-cC-HHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 6555444 344 3788 999999999988765 67777542000 01 2344444333335789999999999
Q ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-C------------------------------------------CEEe
Q 010008 353 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G------------------------------------------YKLV 389 (520)
Q Consensus 353 ~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G------------------------------------------~~v~ 389 (520)
+|...+.....++..++..+.+..+++.|.+. + +.++
T Consensus 433 ~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (755)
T PRK15029 433 VAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVM 512 (755)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceeee
Confidence 98877654234566677777788888887652 2 2222
Q ss_pred cCC---------------CCCeeEEEEecCCCCCHH---------HHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccC
Q 010008 390 SGG---------------SDNHLVLVDLRPMGIDGA---------RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 445 (520)
Q Consensus 390 ~~g---------------t~~~~~~vd~~~~g~~~~---------~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~ 445 (520)
.++ -|.-=+++.++..+++|. .+.+.|+++||.+.+.. ...+ -
T Consensus 513 ~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~---------~~~v----L 579 (755)
T PRK15029 513 HPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT---------DFQI----M 579 (755)
T ss_pred cccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC---------CCeE----E
Confidence 210 011123344544566676 89999999999997631 1122 2
Q ss_pred CccccCCCHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+++.|.++++++++.+.+.+.-+
T Consensus 580 ~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 580 FLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHH
Confidence 355667889999999998887633
No 209
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=9.2e-19 Score=181.28 Aligned_cols=228 Identities=16% Similarity=0.190 Sum_probs=155.0
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| ++++++.|.+. -+...||++|+.+++ .+++|||+|+++.+.|++...... ...-.+
T Consensus 52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~-----~~~~~~ 116 (364)
T PRK07269 52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFN-----QQEKEG 116 (364)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHH-----HHHhcC
Confidence 345677888 67888888765 255678889999888 467999999999887765432100 000000
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.+. + ++..|++++++++++ +||+|+++.|+||+ ..|+++|+++|+++|+++++|++++.++. .
T Consensus 117 -~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-----~ 181 (364)
T PRK07269 117 -RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-----Q 181 (364)
T ss_pred -cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 011 1 234689999999987 89999999999987 68999999999999999999999765432 3
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..... ..|......-+++ ++..+ ..+...
T Consensus 182 ~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~~~~--~~G~~~s~~~a~l--~~~~L--~tL~~r 250 (364)
T PRK07269 182 RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFYNLN--TTGAVLSPFDSYL--LMRGL--KTLSLR 250 (364)
T ss_pred CchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHHHHH--HhCCCCCHHHHHH--HHcCC--CcHHHH
Confidence 4555 89999999999998855 699898764 56665542211 1122111122222 23332 235677
Q ss_pred HHHHHHHHHHHHHHHHHC-CC-EEecCCCCCeeEEEEe
Q 010008 367 QNKVVSNCRALASRLVEL-GY-KLVSGGSDNHLVLVDL 402 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~-~v~~~gt~~~~~~vd~ 402 (520)
.++..+|+..+++.|++. ++ ++..++- ..++.+.+
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~v~ypg~-gg~~sf~~ 287 (364)
T PRK07269 251 MERSTANAQEVVAFLKKSPAVKEVLYTGK-GGMISFKV 287 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEeCCCc-CcEEEEEE
Confidence 888999999999999874 44 4444442 34444544
No 210
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=2.2e-18 Score=180.28 Aligned_cols=246 Identities=18% Similarity=0.179 Sum_probs=166.7
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .|.++||+.|+.+++. ++++||+|+++++.|++.+.... ..+...|
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 455667777 68889999875 3556999999887776 78999999999998876542111 1122235
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.+++ .|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 118 ~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 I--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred C--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 4 5555443 278999999987 89999999999887 78999999999999999999999765432 2
Q ss_pred CCCC-cccEEEeccCcccCCCCc---eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg---G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+.+ |+++++++ ++.++++....+. |......-+.+ +++.+ ..+..+
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl--~tl~~R 252 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGL--KTLHVR 252 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHHHHhc--CCCCCHHHHHH--HHccc--CcHHHH
Confidence 2334 789999999999988764 88888763 5666665433221 22111112222 22222 124567
Q ss_pred HHHHHHHHHHHHHHHHHCC-C-EEecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCe
Q 010008 367 QNKVVSNCRALASRLVELG-Y-KLVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASI 421 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~G-~-~v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI 421 (520)
.++..+|+..+++.|++.+ + ++..++- ...++.+++. +.+.+.++++..++
T Consensus 253 ~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~----~~~~~~~f~~~l~l 320 (390)
T PRK08064 253 LEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ----SEEAVRQFVSHVKL 320 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC----CHHHHHHHHHhCCc
Confidence 7888999999999998743 2 2332211 1123444442 23567788888887
No 211
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=1.6e-18 Score=180.14 Aligned_cols=284 Identities=17% Similarity=0.189 Sum_probs=181.1
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +++++++|+++ .+...||++|+.+++ ++++|||+|+++++.|++.+... .......|
T Consensus 50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 115 (366)
T PRK08247 50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF----EEHWKKWN 115 (366)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH----HHHhhccC
Confidence 456677787 67889999986 355688989988765 68899999999999887643211 01122234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++. .|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|+++..++. .
T Consensus 116 ~--~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~-----~ 181 (366)
T PRK08247 116 V--RFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-----Q 181 (366)
T ss_pred c--eEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-----c
Confidence 3 5555432 489999999988 89999999999986 67899999999999999999999754432 2
Q ss_pred CCCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccCC-CCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
.|+. ++|++++|++|++.|+ ++|+++++++ ++.+++..... .+..-+| ..+. .++..+ ..+..
T Consensus 182 ~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~~~~~~~g~~~s~-~~a~----l~~~~l--~tl~~ 249 (366)
T PRK08247 182 RPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLAYYQNAAGAVLSP-FDSW----LLIRGM--KTLAL 249 (366)
T ss_pred CchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHHHHHHhcCCCCCh-HHHH----HHHhcc--CcHHH
Confidence 2444 6899999999999876 6799988753 55555432211 1111111 1111 112222 13455
Q ss_pred HHHHHHHHHHHHHHHHHH-CCCEE-ecCCCCCeeEEEEecCCCCCHHHHHHHHhhc---CeEEcCCC------CCCCCC-
Q 010008 366 YQNKVVSNCRALASRLVE-LGYKL-VSGGSDNHLVLVDLRPMGIDGARVEKILDMA---SITLNKNS------VPGDKS- 433 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~-~G~~v-~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~---gI~v~~~~------~Pg~~~- 433 (520)
..++..+|++.+++.|++ .++.. ..++. ..++.+.+. ..+.+.++++.. .+.++-+. .|+...
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~-gg~~sf~~~----~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~ 324 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGR-GGMLSFRLQ----DEEWVNPFLKSLKLITFAESLGGVESFITYPATQTH 324 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCc-CcEEEEEEC----CHHHHHHHHHcCCcceEccCCCCCceEEECCccccc
Confidence 667789999999999988 47654 33432 334445553 123344444332 22332210 344221
Q ss_pred -----------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 434 -----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 434 -----------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
...++-+|++.. -|+.+.+.+-|.+++.
T Consensus 325 ~~~~~~~r~~~gi~~~~~R~svG--------lE~~~dl~~dl~~al~ 363 (366)
T PRK08247 325 ADIPEEIRIANGVCNRLLRFSVG--------IENVEDLIADLKQAFK 363 (366)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 112345888754 3677777777777765
No 212
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.82 E-value=2.4e-18 Score=178.98 Aligned_cols=249 Identities=21% Similarity=0.212 Sum_probs=167.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +++++++|.+. .+...||++|+..++.++++|||+|++.++.|++...... ......|
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 104 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLG 104 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcC
Confidence 466677888 67888999864 3556899999999999999999999999988766431110 0111234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++.+ |++++++++++ ++|+|++..++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 105 ~--~~~~v~~~------d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 I--EVTFVDPD------DPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred e--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 3 55554432 68999999987 89999999888886 78999999999999999999999876643 2
Q ss_pred CCCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.++. ++|++++|++|++.|+ ++|+++++++ ++.+++...... .|+......++ .+++.+ ..+...
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~--~g~~~~p~~a~--~~l~~l--~tl~~r 239 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRFLRLA--LGTILSPFDAW--LLLRGL--KTLPLR 239 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHHHHHh--hCCCCCHHHHH--HHHcCC--CCHHHH
Confidence 3444 6899999999999875 4799999773 455555432111 11111111121 123322 234567
Q ss_pred HHHHHHHHHHHHHHHHHCC-CE-EecCC---------------CCCeeEEEEecCCCCCHHHHHHHHhhcCeE
Q 010008 367 QNKVVSNCRALASRLVELG-YK-LVSGG---------------SDNHLVLVDLRPMGIDGARVEKILDMASIT 422 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~G-~~-v~~~g---------------t~~~~~~vd~~~~g~~~~~~~~~L~~~gI~ 422 (520)
.++..+|++.+++.|++.+ +. +..++ ..+.++.+++. + +.+.+.++++...+.
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~--~-~~~~~~~f~~~l~~~ 309 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK--G-GLEAAKKFLNALKLF 309 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC--C-CHHHHHHHHHcCCcc
Confidence 8889999999999998853 42 22221 12345555554 2 345566666665554
No 213
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.2e-18 Score=172.78 Aligned_cols=317 Identities=18% Similarity=0.182 Sum_probs=198.2
Q ss_pred cCCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH
Q 010008 100 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 177 (520)
Q Consensus 100 asen~--~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~ 177 (520)
.|+|. ..|.++|+|...-. -+..-||..++...+| ++++++||... -+.+.|||+||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 46775 47999999976421 1223477778787777 68889999843 3456899999999999
Q ss_pred hhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC-CCCCCCHHHHHHHhhh----c--CCcEEEEcC
Q 010008 178 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL----F--RPKLIIAGA 250 (520)
Q Consensus 178 all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~-~~~~iD~d~le~~i~~----~--~pklIi~~~ 250 (520)
+.++||+.|++-...|--.. ....+.+.+. ..++++.+ .++.+++|+|+..+.+ + .|.+++.+.
T Consensus 69 ~~~~~~~~vi~~~~aHi~~~------E~Ga~~~~~~---~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHETAHIYTD------ECGAPEFFGG---GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEeccccceec------ccCcHHHHcC---CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 99999999998775442111 1123333332 22333443 5799999999997763 1 345555654
Q ss_pred CC-CCCCCC---HHHHHHHHHHhCCEEEEechhhccc-ccccccCCCC-CcccEEEeccCcccCCCCceEEEeeCCCcch
Q 010008 251 SA-YPRDFD---YPRMRQIADAVGALLMMDMAHISGL-VAASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 251 s~-~p~~~d---~~~i~~ia~~~g~~li~D~Ah~~gl-i~~~~~~~p~-~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~ 324 (520)
++ .+++.+ +++|+++||++|+.|+.|+|-.+.. ++.+.....+ .|+|+++++++|.++.|-+.+++++.
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~----- 214 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR----- 214 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence 44 355554 6677889999999999999865543 3333111112 28999999999998877778888887
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHH--HHHHHHHHHH-CCCEEecCCCCCeeEEE
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSN--CRALASRLVE-LGYKLVSGGSDNHLVLV 400 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~n--a~~l~~~L~~-~G~~v~~~gt~~~~~~v 400 (520)
++.++.+...-. .|+ .+...--++++.....+.. +. .....+| ++.|++.|.+ .|+++..+ ++++++++
T Consensus 215 -~~~~~a~~~rK~--~Gg-l~~k~r~laA~~~~~l~~~~~~--~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~ 287 (342)
T COG2008 215 -DFAKRARRWRKR--AGG-LMRKARFLAAQGLYALEDDVWR--LAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFV 287 (342)
T ss_pred -HHHHHHHHHHHH--hcc-cHhhhhHHHHHHHHHHhccHHH--HHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEE
Confidence 676665432111 111 1222222222222222223 23 3334455 9999999985 69999887 56778888
Q ss_pred EecCCCCCHHHHHHHHhhcCeEEcCCC-CCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 401 DLRPMGIDGARVEKILDMASITLNKNS-VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 401 d~~~~g~~~~~~~~~L~~~gI~v~~~~-~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
++....+ +.|...|+....+. ++.. . .-+|+-|+ +-.+++|+++++..+++++
T Consensus 288 ~l~~~~i------~~l~~~~~~~~~~~~~~~~----~-~~vRfvts----~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 288 RLPESAI------EALRLAGALFYRGVLIGAH----G-EIVRFVTS----WATSEEDVDELVAAIKALL 341 (342)
T ss_pred ECChHHH------HHHHhhchhheeeeeccCC----C-ceEEEEee----ccCCHHHHHHHHHHHHHhh
Confidence 7753222 34444444332211 1100 0 25899554 4556999999998887653
No 214
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=1e-18 Score=182.38 Aligned_cols=213 Identities=19% Similarity=0.157 Sum_probs=149.3
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +.+++++|.+. .|..+||++|+..++.++++|||+|+++++.|++...... .+...|
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~-----~~~~~g 116 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLK-----SLEKFG 116 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH-----HhhccC
Confidence 456677888 67889999864 2456889999999999999999999999998876532110 011223
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..+ .+|++++++++++.++|+|++..++||+ ..|+++|+++|+++|+++++|++|..++...
T Consensus 117 ~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---- 183 (385)
T PRK08574 117 V--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---- 183 (385)
T ss_pred c--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC----
Confidence 2 33332 2468999999876579999999999887 7899999999999999999999987775432
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
++. ++|++++|+||++.|+. ||+++++++ ++.+++...... .|.......++ .+++.+ ..+..+
T Consensus 184 -~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~~~~~~--~g~~~~p~~a~--l~l~~l--~tL~~R 251 (385)
T PRK08574 184 -PLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELWEWRRR--LGTIMQPFEAY--LVLRGL--KTLEVR 251 (385)
T ss_pred -hhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHHHHHHh--cCCCCCHHHHH--HHHccc--CcHHHH
Confidence 333 68999999999998874 686777553 555554322110 12211112222 223332 235667
Q ss_pred HHHHHHHHHHHHHHHHHC
Q 010008 367 QNKVVSNCRALASRLVEL 384 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~ 384 (520)
.++..+|+..+++.|++.
T Consensus 252 ~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 252 FERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 888889999999999873
No 215
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.82 E-value=5.1e-18 Score=192.71 Aligned_cols=301 Identities=19% Similarity=0.183 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----CCCCC----EEEEcCCCCCcccccccccccccccc
Q 010008 139 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSG 210 (520)
Q Consensus 139 ~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al----l~pGD----~Vl~~~~~~~ghls~g~~~~~~~v~~ 210 (520)
+++...++++++++|.+. +.+++.+|++|+++.++++ .++|| +|++++..|+++.. ...+
T Consensus 542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~~ 609 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAVM 609 (954)
T ss_pred HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHHH
Confidence 444456699999999985 4677777888886655544 36776 58888877665431 2334
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccc
Q 010008 211 TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA 286 (520)
Q Consensus 211 ~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~ 286 (520)
.|. +++.++++ +++.+|+++|+++++++ ++.+|++.++++.+ ..|+++|+++|+++|+++++|+||..+++..
T Consensus 610 ~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l 686 (954)
T PRK05367 610 AGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGL 686 (954)
T ss_pred CCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCC
Confidence 454 67777776 46899999999999764 35566676666555 3689999999999999999999997665532
Q ss_pred cccCCCCC-cccEEEeccCcccCCCCc------eEEEeeCCCcchhhHHHhhccc-----CCCCCCCCChHH----HHHH
Q 010008 287 SVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNH----TIGG 350 (520)
Q Consensus 287 ~~~~~p~~-~aDiv~~S~hK~l~Gprg------G~I~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~----~iaa 350 (520)
. .|.. ++|++++++||||++|.| |++.+++ .+...+... .+....|..... ...+
T Consensus 687 ~---~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~------~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~ 757 (954)
T PRK05367 687 A---RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA------HLAPFLPGHPVQIAGGETGIGAVSAAPFGSASIL 757 (954)
T ss_pred C---ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecc------cccccCCCCccCcCCCCCCcCcchhHHHHHHHHH
Confidence 1 3323 799999999999865553 5888876 233222111 111111211111 1111
Q ss_pred H-H-HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC---CCCCeeEEEEecCC----CCCHHHHHHHHhhcCe
Q 010008 351 L-A-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---GSDNHLVLVDLRPM----GIDGARVEKILDMASI 421 (520)
Q Consensus 351 l-a-~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~---gt~~~~~~vd~~~~----g~~~~~~~~~L~~~gI 421 (520)
. + ..+..+..+++++..++...+++++++.|.+ ++++... +...|-+++|+++. +++..++.+.|.+.||
T Consensus 758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~ 836 (954)
T PRK05367 758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGF 836 (954)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCC
Confidence 1 1 2244444556788888888999999999976 4554332 22245566777431 4566889999999999
Q ss_pred EEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 422 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 422 ~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
.....+.| .++.+||.....++ ++|++++++++..+.....++
T Consensus 837 ~~~t~~~p------v~~~l~i~ptE~~s----~~elDr~~~al~~i~~e~~~~ 879 (954)
T PRK05367 837 HAPTMSFP------VAGTLMVEPTESES----KAELDRFCDAMIAIRAEIDEV 879 (954)
T ss_pred eEeecCCc------cCCEEEEEeeecCC----HHHHHHHHHHHHHHHHHHHHh
Confidence 87542223 36789998776554 899999999998887766554
No 216
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=9.4e-18 Score=177.38 Aligned_cols=316 Identities=18% Similarity=0.218 Sum_probs=194.7
Q ss_pred CCCCChHHHHHHHhhhhhccCCC-CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 179 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~-G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al 179 (520)
+-.++|+.|++++...+.+ |.. +|.-..-..| ...+.+| +.+++++|++.. +.++||+.|+.+++.+
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~le----~~lA~l~gae~a-----lvv~sg~aAi~l~l~~- 156 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHVE----GLLCELTGAEDA-----LVVNNNAAAVLLALNT- 156 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHHH----HHHHHHhCCCcE-----EEECCHHHHHHHHHHH-
Confidence 3456799999999887764 321 1110000112 2234444 788999999863 3458899999888854
Q ss_pred CCCCCEEEEcCCC---CCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 010008 180 LKPHDRIMGLDLP---HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 255 (520)
Q Consensus 180 l~pGD~Vl~~~~~---~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 255 (520)
+.+||+|++.+.. +|+.+... ..+...|. +++.++.+ ...|++++++++++ +|++|++.+++|++
T Consensus 157 l~~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 157 LAKGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRI 225 (454)
T ss_pred hCCcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccc
Confidence 6899999998865 33332211 11233454 55565542 34689999999988 89998887665542
Q ss_pred -----CCCHHHHHHHHHHhCCEEEEechhhcccccc----cc--cC---CCCC-cccEEEeccCcccCCCCceEEEeeCC
Q 010008 256 -----DFDYPRMRQIADAVGALLMMDMAHISGLVAA----SV--VA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 320 (520)
Q Consensus 256 -----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~----~~--~~---~p~~-~aDiv~~S~hK~l~GprgG~I~~~~~ 320 (520)
..|+++|+++|+++|+++++|.+ +|.+.. +. .| .++. ++|++++|+||+|.||.+|++++++
T Consensus 226 ~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~- 302 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK- 302 (454)
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH-
Confidence 67999999999999999999974 454311 11 11 2223 7999999999999999999999988
Q ss_pred CcchhhHHHhhcccCCCC-CCCCChHHHHHHHHHHHHHhcCch--h---------HHHHHHHHHHHHHHHHHHHH---CC
Q 010008 321 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPE--F---------KVYQNKVVSNCRALASRLVE---LG 385 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~-~~g~p~~~~iaala~al~~~~~~~--~---------~~~~~~i~~na~~l~~~L~~---~G 385 (520)
++.+++......- +. ..-..++++...+.....+. + ....++..+++..+++.|.+ .|
T Consensus 303 -----~~i~~l~~~~l~r~lr--~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~ 375 (454)
T TIGR00474 303 -----ELIERLKKNPLTRALR--VDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPG 375 (454)
T ss_pred -----HHHHhhhhchhHHHHh--hChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCC
Confidence 5555543211100 00 00113345544554443322 0 11234777889999999976 34
Q ss_pred C--EEec------CCC--CCe--eEEEEecCCCCCHHHHHHHHhhcC--eEEcCCCCCCCCCCCCCCEEEEccCCccccC
Q 010008 386 Y--KLVS------GGS--DNH--LVLVDLRPMGIDGARVEKILDMAS--ITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 451 (520)
Q Consensus 386 ~--~v~~------~gt--~~~--~~~vd~~~~g~~~~~~~~~L~~~g--I~v~~~~~Pg~~~~~~~~giRig~~~~tt~g 451 (520)
+ .++. +|+ ... -..+.+.+.+.+..++++.|++.. |.++. ..+.+-+-. |-
T Consensus 376 ~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~----------~~~~~~ld~-----r~ 440 (454)
T TIGR00474 376 FELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGRI----------EDDRFLLDL-----RT 440 (454)
T ss_pred ceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE----------ECCEEEEEe-----Cc
Confidence 4 3332 222 111 123445555678889999998766 44321 123444432 44
Q ss_pred CCHHHHHHHHHHH
Q 010008 452 FSEKEFVAIADFI 464 (520)
Q Consensus 452 ~~~~d~~~la~~i 464 (520)
+.++|++.+++.+
T Consensus 441 ~~~~~~~~~~~~~ 453 (454)
T TIGR00474 441 LLEDEEELLIEAL 453 (454)
T ss_pred CCHHHHHHHHHHh
Confidence 6789999998876
No 217
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.82 E-value=4.2e-18 Score=189.24 Aligned_cols=304 Identities=20% Similarity=0.244 Sum_probs=196.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC-------CC-CEEEEcCCCCCccccccccccccc
Q 010008 136 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------PH-DRIMGLDLPHGGHLSHGFMTPKRR 207 (520)
Q Consensus 136 ~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~-------pG-D~Vl~~~~~~~ghls~g~~~~~~~ 207 (520)
+.+.+.++. +++++++|.+. +.+++.||+.|++++++++-. ++ ++|+++...|+.+.. .
T Consensus 541 ~lq~i~elq-~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------s 607 (954)
T PRK12566 541 YRAMIDELE-AWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------S 607 (954)
T ss_pred HHHHHHHHH-HHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------H
Confidence 344554433 79999999997 589999999999888887632 33 567777766654421 1
Q ss_pred cccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc--EEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhccc
Q 010008 208 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGL 283 (520)
Q Consensus 208 v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pk--lIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gl 283 (520)
....| ++++.++.| ++|.+|+++|++++++.+++ +|.+.++++.+ ..|+++|+++|+++|+++++|+||..++
T Consensus 608 a~~~G--ieVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~ 684 (954)
T PRK12566 608 AQMAG--MRVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ 684 (954)
T ss_pred HHHCC--CEEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc
Confidence 22334 477777777 57899999999999744444 55566666554 4569999999999999999999997665
Q ss_pred ccccccCCCCC-cccEEEeccCcccCCCCc-eE-----EEeeCCCcchhhHHHhhcccC---CCC---CCCCC----hHH
Q 010008 284 VAASVVADPFK-YCDVVTTTTHKSLRGPRG-GM-----IFFKKDPVLGVELESAINNAV---FPG---LQGGP----HNH 346 (520)
Q Consensus 284 i~~~~~~~p~~-~aDiv~~S~hK~l~Gprg-G~-----I~~~~~~~~~~~l~~~i~~~~---~p~---~~g~p----~~~ 346 (520)
... ..|-. ++||+++++||||++|+| |. +.+++ .+...+...- ..+ -.|+- ...
T Consensus 685 ~~l---~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~------~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gs 755 (954)
T PRK12566 685 VGL---ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA------HLAPFVANHPVVPVEGPDPNNGAVSAAPWGS 755 (954)
T ss_pred cCC---CChhhcCCCEEEecCCcccCcCccCCCCccchhhhhh------hhhhhccCCCCcCCCCCCCCCCceeecccch
Confidence 532 22333 899999999999988876 33 33333 2222222110 000 01211 111
Q ss_pred -HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC-C--eeEEEEecC----CCCCHHHHHHHHhh
Q 010008 347 -TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD-N--HLVLVDLRP----MGIDGARVEKILDM 418 (520)
Q Consensus 347 -~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~-~--~~~~vd~~~----~g~~~~~~~~~L~~ 418 (520)
.++-.+.++-.++..+.++.......|+.++++.|.+ ++.+...+.+ . |-+.+++.+ .+.+..++.++|.+
T Consensus 756 a~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d 834 (954)
T PRK12566 756 ASILPISWMYIAMMGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMD 834 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHH
Confidence 1222222222222233445555567799999999976 5554432211 2 445556542 24666778888889
Q ss_pred cCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010008 419 ASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEAK 475 (520)
Q Consensus 419 ~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~~ 475 (520)
.||..-.-++| .++++||+.....+ ++|++++++.+..+.+...++.
T Consensus 835 ~Gihapt~~fP------v~~~LmIepTE~es----keEIDrf~eAL~~I~~e~~~v~ 881 (954)
T PRK12566 835 YGFHAPTMSFP------VPGTLMVEPTESES----KAELDRFVEAMLSIRAEIGKVQ 881 (954)
T ss_pred CCcEEeEEeec------cCCEEEEEeeeeCC----HHHHHHHHHHHHHHHHHHHHHH
Confidence 99987442233 36789998776665 8999999999999888776554
No 218
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=2e-18 Score=180.68 Aligned_cols=291 Identities=17% Similarity=0.095 Sum_probs=188.3
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++.++++| +++++++|.+. -+...||++|+.+++.++++|||+|+++++.|++...... ......|
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~G 129 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE----WLARDFG 129 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH----HHHHhcC
Confidence 566677777 67888999764 2445677899999999999999999999998876432110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++.+ |.+++++++++ +||+|++++|+||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 130 i--~v~~vd~~------~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~----- 195 (394)
T PRK07050 130 I--TVRFYDPL------IGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF----- 195 (394)
T ss_pred e--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 3 55554321 45788988887 89999999998886 779999999999999999999998776542
Q ss_pred CCCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|+++.|++|++.|. .+|+++++++ ++.+++...... .|. ......+ ..+++.+ ..+..+
T Consensus 196 ~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~~~~--~G~-~~~~~~a-~l~lr~l--~tl~~R 264 (394)
T PRK07050 196 KPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLARMR--LGI-GVSADDC-SLVLRGL--PSLQVR 264 (394)
T ss_pred CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHHHHh--cCC-CCCHHHH-HHHHcCC--CcHHHH
Confidence 3343 6899999999999654 3788888764 666666432221 111 1111111 1233322 245567
Q ss_pred HHHHHHHHHHHHHHHHHC-CCE-EecCC---------------CCCeeEEEEecCCCCCH---HHHHHHHhhcCeEEcCC
Q 010008 367 QNKVVSNCRALASRLVEL-GYK-LVSGG---------------SDNHLVLVDLRPMGIDG---ARVEKILDMASITLNKN 426 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~~-v~~~g---------------t~~~~~~vd~~~~g~~~---~~~~~~L~~~gI~v~~~ 426 (520)
.++..+|+..+++.|.+. ++. +..++ ...+++.+.+.. +.+. ..+.+.|+..+|.++.+
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~l~~~~~~~s~G 343 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEALELFAIGWSWG 343 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHcCCCCeeccccC
Confidence 888899999999999873 443 22221 123455555532 2222 34555566677776654
Q ss_pred C----C-CCCC---C----CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 427 S----V-PGDK---S----ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 427 ~----~-Pg~~---~----~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
. + |... . ....+-||++.. -||.+.+.+-|.+++..
T Consensus 344 ~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG--------lE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 344 GACSLAMPYDVASMRTAKWPHRGTLVRLYIG--------LEDEADLIADLEQALEA 391 (394)
T ss_pred CccceEeeCcccccchhhcCCCCCEEEEEeC--------cCCHHHHHHHHHHHHHH
Confidence 2 1 2110 0 012246898864 36788778777777764
No 219
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.82 E-value=2e-18 Score=180.16 Aligned_cols=212 Identities=21% Similarity=0.247 Sum_probs=148.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++..+++| +++++++|++. .+...||++|+.+++.++++|||+|++.++.|++.+.... ..+...|.
T Consensus 53 ~p~~~~le----~~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~g~ 119 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFIS----EILPRFGI 119 (380)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHH----HHHHHhCC
Confidence 45567777 67889999864 2456889999999999999999999998887765432110 11222343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
++..++. .|++++++++++ ++|+|++..++||. ..|+++|.++|+++|+++++|+++..+.. ..
T Consensus 120 --~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~-----~~ 185 (380)
T TIGR01325 120 --EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL-----QQ 185 (380)
T ss_pred --EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 4555443 278999998877 89999999888875 78999999999999999999999765432 23
Q ss_pred CCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
|++ ++|++++|+||++.|+. ||++++++ ++.+.+...... .|+... ...+ +.+++.+ ..+....
T Consensus 186 pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~~~~~--~g~~~~-p~~a-~~~l~~l--~tl~~r~ 253 (380)
T TIGR01325 186 PLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAVYLRH--TGPAMS-PFNA-WVLLKGL--ETLSLRM 253 (380)
T ss_pred chhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHHHHHh--hCCCCC-HHHH-HHHHhcc--CcHHHHH
Confidence 444 78999999999998752 58888877 555554432211 122111 1111 1233322 2345678
Q ss_pred HHHHHHHHHHHHHHHHC
Q 010008 368 NKVVSNCRALASRLVEL 384 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~ 384 (520)
++..++++.+++.|++.
T Consensus 254 ~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 254 QKQFDSALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88899999999999884
No 220
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.82 E-value=4.1e-18 Score=174.63 Aligned_cols=287 Identities=21% Similarity=0.225 Sum_probs=180.7
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHH
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 172 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~ 172 (520)
+.++|..++|+.++.+.+...+.+ . .||. .. ..+++ +++++++|.+++ +|..++|+ +++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~-~----~y~~------~~-~~~lr----~~la~~~~~~~~----~i~~t~G~~~~i 77 (330)
T TIGR01140 18 DWLDFSTGINPLGPPVPPIPASAW-A----RYPD------PE-YDELR----AAAAAYYGLPAA----SVLPVNGAQEAI 77 (330)
T ss_pred heeEccccCCCCCCChhhcchHHH-h----hCCC------cc-HHHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence 457777787765544444322221 1 2332 11 23444 678888998865 56678988 676
Q ss_pred HHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 010008 173 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 252 (520)
Q Consensus 173 ~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~ 252 (520)
.++. .++.+| .|++.+|.|.++.. .....|. +++.++ |++++++.+. ++++|++..|+
T Consensus 78 ~~~~-~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--------d~~~l~~~~~--~~~~v~i~~p~ 135 (330)
T TIGR01140 78 YLLP-RLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP--------DLDRLPAALE--ELDVLVLCNPN 135 (330)
T ss_pred HHHH-HHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC--------CHHHHHhhcc--cCCEEEEeCCC
Confidence 6654 446788 68888887755421 1223343 555543 7899998883 57888888888
Q ss_pred CCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC--CcccEEEeccCccc--CCCCceEEEeeCCCcc
Q 010008 253 YPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 323 (520)
Q Consensus 253 ~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~--~~aDiv~~S~hK~l--~GprgG~I~~~~~~~~ 323 (520)
||+ ..+ +++|.++|+++|+++|+|++|. ++........-. ...++++.|+||++ +|.|.||+++++
T Consensus 136 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~---- 210 (330)
T TIGR01140 136 NPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP---- 210 (330)
T ss_pred CCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH----
Confidence 887 666 6677788899999999999964 333221000000 12358999999987 567779999987
Q ss_pred hhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHCC-CEEecCCCCCeeEEEE
Q 010008 324 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVD 401 (520)
Q Consensus 324 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~~G-~~v~~~gt~~~~~~vd 401 (520)
++.+++.... +.+ + .+....+++...++ ..++ +...+++..+++.+.+.|++.+ +++..+ ...++|++
T Consensus 211 --~~~~~l~~~~-~~~-~-~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~f~~~~ 280 (330)
T TIGR01140 211 --ALLARLREAL-GPW-T-VNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGG--TALFLLVR 280 (330)
T ss_pred --HHHHHHHhcC-CCC-C-chHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC--CCeEEEEE
Confidence 6777666543 222 1 12222222222232 3344 5667888889999999998876 555432 34667777
Q ss_pred ecCCCCCHHHHHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccC
Q 010008 402 LRPMGIDGARVEKILDMASITLNKNSVPGDK-SALVPGGIRIGSP 445 (520)
Q Consensus 402 ~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~ 445 (520)
+. +..++.+.|.+.||.+. ||.. +...+++|||++.
T Consensus 281 ~~----~~~~l~~~l~~~gi~v~----pg~~f~~~~~~~iRi~~~ 317 (330)
T TIGR01140 281 TP----DAAALHEALARRGILIR----DFDNFPGLDPRYLRFALP 317 (330)
T ss_pred cC----CHHHHHHHHHHCCEEEE----ECCCCCCCCCCEEEEEec
Confidence 64 34677788888999994 4443 1223568999864
No 221
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=2.3e-18 Score=180.38 Aligned_cols=288 Identities=18% Similarity=0.201 Sum_probs=185.5
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+++| +++++++|.+. .|.++||++|+.+++.++++|||+|++.++.|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG 128 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence 456667777 67889999865 3667899999999999999999999999998875421110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++..++ ..|++++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 129 i--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (398)
T PRK08249 129 V--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q 194 (398)
T ss_pred e--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 3 444433 2689999999988 89999999899886 78999999999999999999999765432 1
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+. ||+++.++ ++.+++..... ..|.......+++ +++.+ ..+...
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~~~~~--~~g~~~s~~~a~l--~l~~l--~tL~~R 262 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVYHYRE--INGATMDPMSAYL--ILRGM--KTLKLR 262 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHHHHHH--hcCCCCCHHHHHH--HHhCc--chHHHH
Confidence 2333 79999999999997753 58887765 56665543211 1122122222222 22222 234567
Q ss_pred HHHHHHHHHHHHHHHHHC-CCE-EecCCCC---------------CeeEEEEecCCCCCHHHHHHHHhhcCeE---EcCC
Q 010008 367 QNKVVSNCRALASRLVEL-GYK-LVSGGSD---------------NHLVLVDLRPMGIDGARVEKILDMASIT---LNKN 426 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~~-v~~~gt~---------------~~~~~vd~~~~g~~~~~~~~~L~~~gI~---v~~~ 426 (520)
.++..+|++.+++.|.+. .+. |..+|-. +.++.+++. + +.+.+.++++...+. ++.+
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~--~-~~~~~~~f~~~l~l~~~~~s~G 339 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK--G-GMDTVKRLLPKLRYAHRAANLG 339 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc--C-CHHHHHHHHHhCCcceEccCCC
Confidence 788899999999999873 332 3333211 224445553 2 234455666554443 3322
Q ss_pred C------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 427 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 427 ~------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
. .|-..+ ...++-||++.. -||.+.+.+-|.+++..
T Consensus 340 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dl~~dl~~al~~ 393 (398)
T PRK08249 340 AVETIYGPARTTSHVENTLEERAALGIPEGLVRISVG--------IEDTEDLIADLEQAFAH 393 (398)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec--------cCCHHHHHHHHHHHHHH
Confidence 1 121110 011356888754 37788888888887764
No 222
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.81 E-value=2.5e-18 Score=176.16 Aligned_cols=262 Identities=17% Similarity=0.169 Sum_probs=170.3
Q ss_pred HHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCC
Q 010008 146 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 224 (520)
Q Consensus 146 ~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~ 224 (520)
+.+++.+|.+ +|.+++|+ +|+..++ .+.|||+|++.+|.|.++. ..+...|. +++.+++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~--------~~~~~~g~--~~~~v~~-- 115 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHA--------HAWRRAGH--QVRELDE-- 115 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHH--------HHHHHcCC--eEEEech--
Confidence 5677778763 56679999 7877664 4689999999999875442 12344555 5556544
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc-
Q 010008 225 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD- 297 (520)
Q Consensus 225 ~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD- 297 (520)
+++++.+. ++|+++++.|+||+ .++ +++|.++|+++|++||+|+++. ........ ..+. +..
T Consensus 116 -------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~v 184 (330)
T PRK05664 116 -------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPGL 184 (330)
T ss_pred -------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCCE
Confidence 24555553 68888888899997 555 5556666788999999999853 32211000 0111 222
Q ss_pred EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 298 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 298 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
+++.|++|++ +|.|.||+++++ ++.+.+.....+.. .....+. +...+|.. ....+...+++.++++
T Consensus 185 i~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~~~~--~~~~~~~-~~~~~L~~--~~~~~~~~~~~~~~r~ 253 (330)
T PRK05664 185 IVLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLGPWT--VSGPTRW-LAQAALAD--TPWQRRQRERLLAASQ 253 (330)
T ss_pred EEEeeccccccCCCcceEEEEeCH------HHHHHHHHhcCCCC--CCHHHHH-HHHHHHhC--hHHHHHHHHHHHHHHH
Confidence 7889999986 799999999987 67777665433221 1122222 22234432 1223566778888899
Q ss_pred HHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHH
Q 010008 376 ALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 455 (520)
Q Consensus 376 ~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~ 455 (520)
.+.+.|++.|++.. + ....++|+.+. +..++.+.|.++||.|.. +. .+++|||++.. +.+
T Consensus 254 ~l~~~L~~~~~~~~-~-~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~----f~----~~~~iRis~~~------~~~ 313 (330)
T PRK05664 254 RLAALLRRHGLTPA-G-GCALFQWVRTE----DAAALHEFLARRGILTRL----FE----QPASLRFGLPA------DEA 313 (330)
T ss_pred HHHHHHHHCCCccc-C-CcceEEEEecC----CHHHHHHHHHHCCeEEEE----CC----CCCeEEEECCC------CHH
Confidence 99999998877532 2 22344555442 567788889999999952 11 24699998652 368
Q ss_pred HHHHHHHHHHHHHH
Q 010008 456 EFVAIADFIHEGVE 469 (520)
Q Consensus 456 d~~~la~~i~~~l~ 469 (520)
+++++.+.++++.+
T Consensus 314 ~~~~l~~al~~~~~ 327 (330)
T PRK05664 314 DWARLDQALLAYRK 327 (330)
T ss_pred HHHHHHHHHHHHHh
Confidence 89999998877654
No 223
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=4.4e-18 Score=176.79 Aligned_cols=289 Identities=13% Similarity=0.091 Sum_probs=186.5
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ++++++-|.+. -+...||+.|+.+++.++++|||+|++.+..|++...... ..+...|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~----~~l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCS----KILSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHH----HHHHhcC
Confidence 678888888 67888888875 2456789999999999999999999998877765432110 0111234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC--CEEEEechhhcccccccc
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASV 288 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g--~~li~D~Ah~~gli~~~~ 288 (520)
. ++..++ ..|.+++++++++ +||+|++..++||+ ..|+++|+++|+++| +++++|.++..++.
T Consensus 127 i--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 127 V--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred c--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 3 444433 2478999999988 89999999999887 789999999999985 99999999887654
Q ss_pred cCCCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhH
Q 010008 289 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 364 (520)
Q Consensus 289 ~~~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 364 (520)
..|++ ++|++++|.||++.|+. +|+++.++ ++.+++..... ..|+.....-+- ..++.+. -+.
T Consensus 194 -~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~--~~G~~~~p~~a~--l~~rgl~--TL~ 260 (395)
T PRK08114 194 -FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSY--LMGQMVDADTAY--MTSRGLR--TLG 260 (395)
T ss_pred -cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHH--hccCCCCHHHHH--HHHcCCC--cHH
Confidence 34555 79999999999999984 48777665 44444432111 122211111111 1223222 245
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CC-EEecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCe---EEc
Q 010008 365 VYQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASI---TLN 424 (520)
Q Consensus 365 ~~~~~i~~na~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI---~v~ 424 (520)
-++++..+|+..+++.|++. .+ +|..++- .+.++.+++.. +.+.+.+.++++...+ .++
T Consensus 261 lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~~~f~~~l~l~~~a~S 339 (395)
T PRK08114 261 VRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK-KLTDEQLANYLDNFSLFSMAYS 339 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC-cccHHHHHHHHHhCCcceeecc
Confidence 67889999999999999884 33 2333321 12345555542 1123556666665444 443
Q ss_pred CCC----C----CCCCCC--------CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 425 KNS----V----PGDKSA--------LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 425 ~~~----~----Pg~~~~--------~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+. + |-.... ...+-||++.. -||.+.+.+-|.+++.
T Consensus 340 lGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvG--------lEd~~DLi~Dl~~Al~ 392 (395)
T PRK08114 340 WGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIG--------LEDVDDLIADLAAGFA 392 (395)
T ss_pred cCCccceeccCCchhhhccCChhHhcCCCCeEEEEec--------cCCHHHHHHHHHHHHH
Confidence 321 0 100000 12256899865 3677777777777765
No 224
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.81 E-value=1.9e-17 Score=185.21 Aligned_cols=301 Identities=20% Similarity=0.211 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC--------CCCEEEEcCCCCCcccccccccccccccc
Q 010008 139 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSG 210 (520)
Q Consensus 139 ~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~--------pGD~Vl~~~~~~~ghls~g~~~~~~~v~~ 210 (520)
+++...+.++++++|.+. +.+++.+|+.|+.+.++++-. ..++|++++-.||.... ....
T Consensus 530 q~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~~ 597 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAAM 597 (939)
T ss_pred HHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHHH
Confidence 344455689999999995 578999999888876666521 23578888876654421 1233
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC-CCC-HHHHHHHHHHhCCEEEEechhhcccccc
Q 010008 211 TSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR-DFD-YPRMRQIADAVGALLMMDMAHISGLVAA 286 (520)
Q Consensus 211 ~g~~~~~v~~~~d~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~-~~d-~~~i~~ia~~~g~~li~D~Ah~~gli~~ 286 (520)
.|. +++.++.| ++|.+|+++|++++++ .++++|++.++++.+ ..| +++|+++|+++|+++++|+|+..++...
T Consensus 598 ~G~--~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l 674 (939)
T TIGR00461 598 AGM--QVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGL 674 (939)
T ss_pred CCC--EEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCC
Confidence 454 66677776 5799999999999985 378889888766655 444 9999999999999999999987654422
Q ss_pred cccCCCCC-cccEEEeccCcccC-----CCCc-eEEEeeCCCcchhhHHHhhccc------------C-CCCCCCCChHH
Q 010008 287 SVVADPFK-YCDVVTTTTHKSLR-----GPRG-GMIFFKKDPVLGVELESAINNA------------V-FPGLQGGPHNH 346 (520)
Q Consensus 287 ~~~~~p~~-~aDiv~~S~hK~l~-----Gprg-G~I~~~~~~~~~~~l~~~i~~~------------~-~p~~~g~p~~~ 346 (520)
..|-. ++|++++|.||+|. |+.| |++.+++. +...+-.. . .......+..+
T Consensus 675 ---~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~------L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~ 745 (939)
T TIGR00461 675 ---TSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH------LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGS 745 (939)
T ss_pred ---CCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh------chhhcCCCcccccccCCCCccccccccccccCc
Confidence 23323 79999999999986 4444 88988873 22111100 0 00000001111
Q ss_pred -HHH-HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCC---CCeeEEEEecC----CCCCHHHHHHHHh
Q 010008 347 -TIG-GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS---DNHLVLVDLRP----MGIDGARVEKILD 417 (520)
Q Consensus 347 -~ia-ala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt---~~~~~~vd~~~----~g~~~~~~~~~L~ 417 (520)
.++ ..++.++.+...++++..++...|+.++++.|.+ +++++..+. .-|-+++++++ .|++..++.+.|.
T Consensus 746 a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~ 824 (939)
T TIGR00461 746 ASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ 824 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence 111 1223456555567888899999999999999987 777766432 23446777764 2466788999999
Q ss_pred hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 418 MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 418 ~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
+.|+..-..+.| ..+.+=|..... .+.+|++++++++..+-....++
T Consensus 825 d~G~hapt~~~p------v~g~lmiepTE~----eskeelD~f~~al~~I~~e~~~~ 871 (939)
T TIGR00461 825 DYGFHAPTLSFP------VPGTLMVEPTES----ESLEELDRFCDAMIAIKEEINAL 871 (939)
T ss_pred hCCeeccccCCc------cCCeEEEEeecc----CCHHHHHHHHHHHHHHHHHHHHh
Confidence 999986432222 223333322222 45899999999998877666544
No 225
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.81 E-value=5.2e-18 Score=176.87 Aligned_cols=287 Identities=20% Similarity=0.216 Sum_probs=181.5
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +.+++++|.+. .+...+|++|+.+++.++++|||+|+++++.|++.+.... ......+
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~----~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN----ALAKKGC 115 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhcC
Confidence 455667777 67888888542 2334556699999999999999999999998876532110 0011112
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.++..+ + ..|.+++++++++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 116 --~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 181 (382)
T TIGR02080 116 --FRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-----Q 181 (382)
T ss_pred --eEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 233332 2 2488999999987 89999999999987 78999999999999999999999866543 2
Q ss_pred CCCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
.|+. ++|++++|+||++.|+ ++|+++++++ ++.+++.... ..+...+|. -+.+ +++.+ .-+..
T Consensus 182 ~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp~---~a~l--~lr~l--~tl~~ 249 (382)
T TIGR02080 182 NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGAF---DSYL--TLRGL--RTLVA 249 (382)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCHH---HHHH--HHccc--chHHH
Confidence 3444 7899999999999775 4699888664 5655554321 112222222 1221 23332 23455
Q ss_pred HHHHHHHHHHHHHHHHHHC-CCE-EecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhh---cCeEEcC
Q 010008 366 YQNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDM---ASITLNK 425 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~-G~~-v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~---~gI~v~~ 425 (520)
++++..+|+..+++.|++. .++ |..++- .+.++.+++. + +.+.+.++++. ..+.++.
T Consensus 250 R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~--~-~~~~~~~f~~~l~~~~~~~s~ 326 (382)
T TIGR02080 250 RMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK--G-GEQTVRRFLGGLSLFTLAESL 326 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec--C-cHHHHHHHHHcCCcceEeccC
Confidence 6788889999999999873 333 332321 1225555664 1 22334444444 4444443
Q ss_pred CC------CCCCC-----C-------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 426 NS------VPGDK-----S-------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 426 ~~------~Pg~~-----~-------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+. .|-.. . ...++-||++.. -||.+.+.+-|.+++.
T Consensus 327 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvG--------lE~~~dl~~dl~~al~ 380 (382)
T TIGR02080 327 GGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVG--------LEDADDLIADLEQGLR 380 (382)
T ss_pred CCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 32 12110 0 012456898754 3678888887777765
No 226
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.81 E-value=8.1e-18 Score=173.03 Aligned_cols=263 Identities=18% Similarity=0.189 Sum_probs=173.3
Q ss_pred HHHHHHHcCCCC-CCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 145 QKRALAAFNLDE-NKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 145 ~~~~~~lfg~~~-~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
++.+++.+|++. + +|.+++|+ +++..+ ..+++||| |++.+|.|.++. ..+...|. +++.+++
T Consensus 59 ~~~ia~~~~~~~~~----~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~--------~~~~~~g~--~~~~v~~ 122 (339)
T PRK06959 59 AACAARYYGAPDAA----HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYA--------PAFARHGH--RVVPLDE 122 (339)
T ss_pred HHHHHHHhCCCCcc----cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHH--------HHHHHCCC--EEEeecc
Confidence 367889999974 4 56779999 777654 45678887 788888775442 12344555 5666555
Q ss_pred CCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHH---HHHhCCEEEEechhhcccccccccCCCC-Ccc
Q 010008 223 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQI---ADAVGALLMMDMAHISGLVAASVVADPF-KYC 296 (520)
Q Consensus 223 d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~i---a~~~g~~li~D~Ah~~gli~~~~~~~p~-~~a 296 (520)
+. +.+ .+ +++++++++|+||+ .++.+++.++ |.++++++|+|+++. .+...... ..+ .+.
T Consensus 123 ~~-------~~~----~~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~~ 188 (339)
T PRK06959 123 AA-------DTL----PA-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDRP 188 (339)
T ss_pred cc-------hhc----cc-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCCC
Confidence 41 222 22 46788888999997 6676666655 557899999999844 43321000 011 111
Q ss_pred c-EEEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHH
Q 010008 297 D-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVS 372 (520)
Q Consensus 297 D-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~ 372 (520)
+ +++.|++|.+ +|.|.||+++++ ++.+.+.+...+.. .... ..++...+|+ ..+| ++..+++.+
T Consensus 189 ~vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~~~--vs~~-~q~a~~~~L~---~~~~~~~~~~~~~~ 256 (339)
T PRK06959 189 GLVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGAWT--VSGP-ARHAVRAAFA---DAAWQAAMRERLAA 256 (339)
T ss_pred CEEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCCCC--CcHH-HHHHHHHHhC---cHHHHHHHHHHHHH
Confidence 2 7889999976 789999999987 77777766543322 1122 2223333443 2334 666788888
Q ss_pred HHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 373 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 373 na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
+++.+.+.|.+.|+++.. ...++|+++. +..++.+.|.+.||.|... + .++++||+.. -
T Consensus 257 ~r~~l~~~L~~~g~~~~~---~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRisi~------~ 315 (339)
T PRK06959 257 DGARLAALLRAHGFAVHA---TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRFGLP------A 315 (339)
T ss_pred HHHHHHHHHHHCCCCccC---cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEEECC------C
Confidence 999999999998887653 2355676653 4567888899999999631 1 2458999853 2
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l~~ 470 (520)
+.+|++++.+.++++++.
T Consensus 316 ~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 316 DEAEWQRLEDALAECVPT 333 (339)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 357999999999887764
No 227
>PRK08354 putative aminotransferase; Provisional
Probab=99.81 E-value=1.6e-17 Score=168.75 Aligned_cols=291 Identities=16% Similarity=0.101 Sum_probs=174.1
Q ss_pred ccceEecCCCC-ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HH
Q 010008 94 KSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 171 (520)
Q Consensus 94 ~~i~Liasen~-~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A 171 (520)
+.|+|..++|+ .|+.+.+++...+.. ..+||. ...++ +.+++++|. +|.+++|+ +|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~--~~~yp~---------~~~l~----~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI--SGRYTY---------YEWLE----EEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH--hhcCCC---------hHHHH----HHHHHHHCC-------CEEECCCHHHH
Confidence 45888888886 467888888766542 224552 12333 567777773 46678998 88
Q ss_pred HHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 172 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
+..++. ++.|||+|++++|+|.++.. .+...|. +++.+ .+|++.+++.++ ++++++++.|
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYER--------VARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHHH--------HHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence 876664 44599999999998865531 2334454 44443 367889988875 5788888889
Q ss_pred CCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCccc--CCCCceEEEeeCCCcch
Q 010008 252 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 324 (520)
Q Consensus 252 ~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 324 (520)
+||+ ..+ +++|.++|+++|+++|+|+++ .++...+.... ..--+++.|++|++ +|.|.||+++..
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~----- 198 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE----- 198 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH-----
Confidence 9997 444 567777888999999999994 45554332111 12237889999986 799999999833
Q ss_pred hhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEec
Q 010008 325 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 325 ~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~ 403 (520)
+..+++. .+...+ ..+.++.. ++.. .+++ ++.++.+.+.+..... +.....+ +..++++++.
T Consensus 199 -~~l~~~~---~~~~~~---~~~~~~~~-~~~~---~~~~----~~~~~~~~~~~~~~~l~~~l~~~~--~~~~~~~~~~ 261 (311)
T PRK08354 199 -EAFRSVR---MPWSIG---STGYAFLE-FLIE---DDFE----HLRKTMPLIWREKERFEKALYVKS--DANFFIKDVG 261 (311)
T ss_pred -HHHHHcC---CCccCC---HHHHHHHH-HHHH---hHHH----HHHHHHHHHHHHHHHHHHhcCCCC--CCcEEEEECC
Confidence 3323322 121111 12222222 2221 1222 2222222222222211 1111122 2344556543
Q ss_pred CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 404 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 404 ~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
+..++.+.|.+.||.+.. |... ..++++||++.. .++.+++.+.++++
T Consensus 262 ----~~~~~~~~l~~~gv~v~~----g~~f-~~~~~iRi~~~~-------~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 ----DAEKFVEFLKRNGILVRD----CTSF-GLPGYIRFSVRD-------REENEKLIRALREW 309 (311)
T ss_pred ----CHHHHHHHHHHCCeEEEe----cccC-CCCCeEEEEeCC-------HHHHHHHHHHHHHh
Confidence 456677788899999954 4331 125799998642 56788888888764
No 228
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=1.3e-17 Score=174.83 Aligned_cols=276 Identities=16% Similarity=0.172 Sum_probs=166.6
Q ss_pred eeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhh
Q 010008 162 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAI 239 (520)
Q Consensus 162 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v-~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~ 239 (520)
+|.+|+|+ +++..++.++++|||+|++++|.|+.+.. .+ ...|. +++.+++..+++.+|++++++.++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~--~vv~v~~~~~~~~~d~~~l~~~~~ 140 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA--EIVTYPIFDEDGGFDTDALKEALQ 140 (388)
T ss_pred eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--EEEEecccCCCCcCCHHHHHHHHH
Confidence 56678888 89999999999999999999998765431 11 12454 677777632446789999998876
Q ss_pred ---hcCCcEEEEcCCCCCC--CCC---HHHHHHHHHH-----hCCEEEEechhhcccccccccCCC-C----C-cccE--
Q 010008 240 ---LFRPKLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASVVADP-F----K-YCDV-- 298 (520)
Q Consensus 240 ---~~~pklIi~~~s~~p~--~~d---~~~i~~ia~~-----~g~~li~D~Ah~~gli~~~~~~~p-~----~-~aDi-- 298 (520)
+...+++++++|+||+ .++ +++|.++|++ ++++||+|++ |.++++.+....+ + + ...+
T Consensus 141 ~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~-Y~~l~~~~~~~~~~~~~~~~~~~~vi~ 219 (388)
T PRK08637 141 AAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDA-YFGLFYEDSYKESLFAALANLHSNILA 219 (388)
T ss_pred hhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEeccc-chhcccCCccchhhHHHhhcccccceE
Confidence 2134456777899997 444 5667777765 8999999998 4566554321111 1 1 1122
Q ss_pred -EEeccCcc--cCCCCceEEEeeCCCcchhhHHHhhccc----CCCCCCCCChHHHHHHHHHHHHHhcCchhHH----HH
Q 010008 299 -VTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV----YQ 367 (520)
Q Consensus 299 -v~~S~hK~--l~GprgG~I~~~~~~~~~~~l~~~i~~~----~~p~~~g~p~~~~iaala~al~~~~~~~~~~----~~ 367 (520)
.+.|++|. ++|.|.||++++.......++.+.+... ......+.+.. ..+++..+|. ...|.. ..
T Consensus 220 i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~---~~~~~~~~~~~~ 295 (388)
T PRK08637 220 VKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHP-SQSAVLRALN---SPEFDKEKQEKF 295 (388)
T ss_pred EEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcH-HHHHHHHHhC---CHHHHHHHHHHH
Confidence 23499996 3899999998753000000444444321 11111222233 3333333332 233422 23
Q ss_pred HHHHHHHHHHHHHHHHC----CCEEecCCCCCeeEEEEecCCCCCHHHHHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEE
Q 010008 368 NKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLRPMGIDGARVEKIL-DMASITLNKNSVPGDKSALVPGGIRI 442 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~----G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRi 442 (520)
..+.++++.+.+.|.+. ++.+..+ ..+.++|+++. +++..++.+.| ++.||.+.. + ..+++||
T Consensus 296 ~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~----~-----~~~~iRi 363 (388)
T PRK08637 296 QILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIA----L-----NETDLRI 363 (388)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC--hHHHHHHHHHHhhhcceEEEe----c-----cCCceEE
Confidence 34555566667777654 4555443 23456676764 33455665655 678998742 1 2568999
Q ss_pred ccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 443 GSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 443 g~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.. ..++++++.++.|.++++
T Consensus 364 ~~~~-----~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 364 AFSC-----VEEEDIPELFDSIYKAIK 385 (388)
T ss_pred Eeec-----CCHHHHHHHHHHHHHHHH
Confidence 8753 347888888888887775
No 229
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=8.8e-18 Score=177.40 Aligned_cols=161 Identities=19% Similarity=0.181 Sum_probs=122.9
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .|.++||+.|+.+++.+++++||+|++++..|+++..... ..+...|
T Consensus 67 ~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~----~~l~~~G 133 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFL----VTLNRLG 133 (437)
T ss_pred cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHH----HHHHhcC
Confidence 456677777 67889999864 4677999999999999999999999999888887632110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
++++.++ ++ .|++++++++++ ++|+|++..+.||. ..|+++|+++|+++|+++++|++|..|.. .
T Consensus 134 --i~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-----~ 200 (437)
T PRK05613 134 --IEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-----V 200 (437)
T ss_pred --eEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-----c
Confidence 3666654 22 289999999988 89999887777764 78999999999999999999999876644 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeC
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 319 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~ 319 (520)
.|+. ++|++++|+||++.|+. ||+++.+.
T Consensus 201 ~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 201 RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 3444 79999999999997753 47777543
No 230
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.1e-17 Score=174.27 Aligned_cols=288 Identities=14% Similarity=0.090 Sum_probs=180.1
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++..+.+| ++++++.|.+. .+...||++|+.+++.++++|||+|+++++.|++...... ..+...|.
T Consensus 60 npt~~~Le----~~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~----~~l~~~Gi 126 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCD----KILKGFGI 126 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----Hhhhhcce
Confidence 44456677 56777777653 2445778899999999999999999999998765432110 01112333
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
++..++. -|.+.+++++++ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+.. ..
T Consensus 127 --~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~ 192 (394)
T PRK09028 127 --ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SR 192 (394)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 3333322 155789998887 89999999999997 77999999999999999999999876532 34
Q ss_pred CCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
|++ ++|+++.|+|||+.|+. +|+++.++ ++.+++..... ..|+.....-+- ..++.+. -+.-++
T Consensus 193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~--~~G~~~~p~~a~--l~~rgl~--TL~lR~ 260 (394)
T PRK09028 193 PFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSY--LMGQCTSPDDVY--LAMRGLR--TLGVRL 260 (394)
T ss_pred ccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHH--hcCCCCCHHHHH--HHHcccC--cHHHHH
Confidence 666 79999999999999985 47776554 45444432111 112211111111 1223322 246678
Q ss_pred HHHHHHHHHHHHHHHHC-CC-EEecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcC---eEEcCCC
Q 010008 368 NKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMAS---ITLNKNS 427 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~g---I~v~~~~ 427 (520)
++..+|+..+++.|++. .+ +|..++- .+.++.+.+.. + +.+.+.++++... +.++-+.
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~-~-~~~~~~~f~~~l~l~~~~~slG~ 338 (394)
T PRK09028 261 AQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQ-G-DPKAVTALVEGMQHFKMGFSWGG 338 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECC-C-CHHHHHHHHHhCCcceEecccCC
Confidence 89999999999999884 33 3433321 12244445531 1 2344555555543 3333321
Q ss_pred ------CCCCCC--------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 428 ------VPGDKS--------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 428 ------~Pg~~~--------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.|...+ ...++-||++.. -||.+.+.+-|.+++..
T Consensus 339 ~~sLv~~p~~~~~~~~~~~~~~~~~liR~svG--------lEd~~dLi~Dl~~Al~~ 387 (394)
T PRK09028 339 FESLILGVFGINKLRTATNWDFSKPLIRLHIG--------LEDVDDLIADLEAGFER 387 (394)
T ss_pred CcceeECCCCcCccCchhhhcCCCCeEEEEeC--------cCCHHHHHHHHHHHHHH
Confidence 121100 011245888754 36777778777777764
No 231
>PLN02509 cystathionine beta-lyase
Probab=99.80 E-value=7.2e-18 Score=178.70 Aligned_cols=215 Identities=21% Similarity=0.212 Sum_probs=146.6
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| +++++++|.+. .+..+||+.|+.+++ ++++|||+|+++++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 667777777 67888888764 355688888876544 679999999999998876421100 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.++ ..|++++++++++ ++|+|++..++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-----~ 262 (464)
T PLN02509 197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-----S 262 (464)
T ss_pred e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3 555543 2478999999987 89999999998886 77999999999999999999999877654 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+. +|+++++++ .+.+++...... .|+......|++ .++.+ ..+..+
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-----~l~~~~~~~~~~--~g~~l~p~~A~l--~lr~L--~tL~~R 331 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQNS--EGSGLAPFDCWL--CLRGI--KTMALR 331 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH-----HHHHHHHHHHHh--cCCCcCHHHHHH--HHhhh--hhHHHH
Confidence 3444 79999999999998865 588888764 343333211110 111111111221 22222 234567
Q ss_pred HHHHHHHHHHHHHHHHH-CCC
Q 010008 367 QNKVVSNCRALASRLVE-LGY 386 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~-~G~ 386 (520)
.++..+|++.+++.|++ ..+
T Consensus 332 ~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 332 IEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 88999999999999987 344
No 232
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=2e-17 Score=172.36 Aligned_cols=212 Identities=17% Similarity=0.167 Sum_probs=145.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++..+++| +.+++++|.+. .+..+||++|+..++.++++|||+|+++++.+++.+... ...+...|.
T Consensus 44 ~p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~----~~~~~~~G~ 110 (376)
T PRK06460 44 NPTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFF----TDYLKNWGV 110 (376)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHH----HHHHHhhCc
Confidence 44556666 67889999975 345589999999999999999999999887665432211 112233454
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
++..++.+ |.+.+++.+++ ++|+|++++++||+ .+|+++|.++|+++|+++++|+++..+.. ..
T Consensus 111 --~v~~~~~~------~~~~l~~~~~~-~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~~ 176 (376)
T PRK06460 111 --NVDASNPG------SDNIIEKAKSK-RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----QK 176 (376)
T ss_pred --EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----CC
Confidence 44444432 23445555555 89999999999987 88999999999999999999999764321 12
Q ss_pred CCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
++. ++|+++.|+||++.|++ +|+++.++ ++.+++.....+...+ .. ...+. .+++.. ..++...
T Consensus 177 ~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~~~~~g~~-~~--~~~a~-~~l~~~--~~l~~r~ 244 (376)
T PRK06460 177 PLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQMRRTLGTS-LD--PHAAY-LTLRGI--KTLKIRM 244 (376)
T ss_pred hhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHHHHhcCCC-CC--HHHHH-HHHhch--hhHHHHH
Confidence 332 68999999999998875 69998877 6666665432221111 11 12221 122221 2346778
Q ss_pred HHHHHHHHHHHHHHHHC
Q 010008 368 NKVVSNCRALASRLVEL 384 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~~ 384 (520)
+++.+|++.+++.|++.
T Consensus 245 ~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 245 DVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 89999999999999874
No 233
>PRK05939 hypothetical protein; Provisional
Probab=99.80 E-value=2.5e-17 Score=172.49 Aligned_cols=157 Identities=17% Similarity=0.149 Sum_probs=122.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++.++.+| ++++++.|.+. .|..+||+.|+.+++.++++|||+|++.++.|++|..... .+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~-----~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFG-----TLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHH-----HHHhcC
Confidence 678888888 67889999876 3667899999999999999999999999988887643221 122345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.+++ .|++++++++++ +||+|++..++||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 111 ~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 176 (397)
T PRK05939 111 V--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF----- 176 (397)
T ss_pred C--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 4 5555443 389999999987 89999999888886 679999999999999999999998766431
Q ss_pred CCCC-cccEEEeccCcccCCCCc--eEEEe
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG--GMIFF 317 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg--G~I~~ 317 (520)
.|.. ++|+++.|+||++.|+.. |.++.
T Consensus 177 ~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred CccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 2333 799999999999976433 44444
No 234
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=3.1e-17 Score=170.99 Aligned_cols=286 Identities=14% Similarity=0.121 Sum_probs=180.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .|.++||+.|+.+++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~----~~~~~~g 113 (380)
T PRK06176 48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD----KVLVKNG 113 (380)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH----HHHHhcC
Confidence 456677887 67889999876 355699999888655 578999999999988876542111 0112233
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
+++..++. .|++++++++++ ++|+|++..|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 114 --i~v~~vd~------~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-----~ 179 (380)
T PRK06176 114 --LSCTIIDT------SDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-----Q 179 (380)
T ss_pred --eEEEEcCC------CCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 35545432 489999999987 89999999888886 78999999999999999999999765432 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|+||++.|+. +|+++++++ ++.+++..... ..|......-+ ...++.+ ..+..+
T Consensus 180 ~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~~~~~--~l~~~gl--~tl~~R 248 (380)
T PRK06176 180 NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAFFQN--AIGGVLGPQDS--WLLQRGI--KTLGLR 248 (380)
T ss_pred CccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHHHHH--HhcCCCCHHHH--HHHHhcc--CcHHHH
Confidence 3444 79999999999998875 688888763 55554432111 11110000111 1111111 234566
Q ss_pred HHHHHHHHHHHHHHHHHC-CCE-EecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCe---EEcCC
Q 010008 367 QNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASI---TLNKN 426 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~~-v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI---~v~~~ 426 (520)
.++..+|+..+++.|++. .+. +..++- ...++.+++. +.+.+.++++...+ .++.+
T Consensus 249 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~----~~~~~~~f~~~l~~~~~~~s~G 324 (380)
T PRK06176 249 MEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK----NDSEAVAFVESLKLFILGESLG 324 (380)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHHHcCCcceEccCCC
Confidence 788889999999999873 342 222210 1224455553 23455566655444 33332
Q ss_pred C------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 427 S------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 427 ~------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
. .|...+ ...++-||++.. -||.+.+.+-|.++++
T Consensus 325 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG--------lE~~~dli~dl~~Al~ 377 (380)
T PRK06176 325 GVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG--------IEHEQDLLEDLEQAFA 377 (380)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec--------cCCHHHHHHHHHHHHh
Confidence 1 132110 011345888754 3678888877777775
No 235
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.2e-17 Score=174.05 Aligned_cols=215 Identities=19% Similarity=0.175 Sum_probs=148.3
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +.+++++|.+. .+.+.||+.|+.+++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G 113 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT----KVLNRFG 113 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH----HHHhcCC
Confidence 456677777 67889999875 355689998877654 678999999999998875432110 0112234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.++. .|++++++++++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|+++..+.. .
T Consensus 114 ~--~v~~v~~------~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~-----~ 179 (377)
T PRK07671 114 I--EHTFVDT------SNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW-----Q 179 (377)
T ss_pred e--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 3 5555432 489999999987 89999999999986 78999999999999999999999654322 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|++|++.|+. +|+++++++ ++.+++...... .|+......+. .+++.+ ..+..+
T Consensus 180 ~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~~~~~--~g~~~~~~~a~--l~~~~l--~tl~~R 248 (377)
T PRK07671 180 SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHFVQNS--TGGILGPQDSW--LLLRGL--KTLGIR 248 (377)
T ss_pred ChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHHHHHh--hcCCCCHHHHH--HHHcCc--ChHHHH
Confidence 3444 78999999999999885 588887664 565555432111 12111111111 122322 224557
Q ss_pred HHHHHHHHHHHHHHHHH-CCC
Q 010008 367 QNKVVSNCRALASRLVE-LGY 386 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~-~G~ 386 (520)
.++..+|++.+++.|++ .++
T Consensus 249 ~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 78888999999999987 344
No 236
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.4e-17 Score=174.96 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=123.6
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++.++.+| +.++++.|..+ -|.+.||+.|+.+++.++++|||+|+++.+.|++..... ...+...|
T Consensus 59 ~nPtv~~lE----~~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~----~~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLF----GVSLRKLG 125 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHH----HHHHHHCC
Confidence 457788888 67888999876 255689999999999999999999999999887653210 00123345
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. ++.+++ ..+|++++++++++ +||+|++..++||+ ..|+++|+++|+++|+++++|++.... ...
T Consensus 126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~ 192 (432)
T PRK06702 126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC 192 (432)
T ss_pred C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence 4 555543 34799999999998 99999999899987 789999999999999999999985322 223
Q ss_pred CCCC-cccEEEeccCcccCCCCc---eEEEe
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG---GMIFF 317 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg---G~I~~ 317 (520)
.|+. ++||++.|++|++.|.-. |.++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 5665 799999999999987654 66653
No 237
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=1.5e-17 Score=172.81 Aligned_cols=284 Identities=15% Similarity=0.131 Sum_probs=180.7
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++.++++| ++++++.|.+. .|.+.||+.|+.+++.++++|||+|++++..|++.+... ...+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~----~~~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF----NKVLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHHhcC
Confidence 678889999 67889999876 366799999999999999999999999887777664321 01222334
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.+++++. ..++ +.+.++|+|++..++||+ ..|+++|+++|+++| +++|+++.++. ..
T Consensus 129 i--~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-----~~ 191 (384)
T PRK06434 129 I--HVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-----NQ 191 (384)
T ss_pred c--EEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-----cC
Confidence 4 6667666531 1122 222368999999888876 789999999999998 56799975432 23
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|+. ++|++++|.||++.|+. ||+|+++++ ++.+++..... ..|......-|++ .+..+ ..+..+
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~~~~--~~G~~~~~~~A~l--~~~gL--~tL~~R 260 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVERRK--TLGSNPDPIQAYL--ALRGL--KTLGLR 260 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHHHHH--hcCCCCCHHHHHH--HHhCC--CcHHHH
Confidence 4555 79999999999998865 688888764 56555542210 1122111222222 23333 345778
Q ss_pred HHHHHHHHHHHHHHHHHC-CC-EEecCCC---------CCeeEEEEecCCCCCHHHHHHHHhhcC---eEEcCCC-----
Q 010008 367 QNKVVSNCRALASRLVEL-GY-KLVSGGS---------DNHLVLVDLRPMGIDGARVEKILDMAS---ITLNKNS----- 427 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~-G~-~v~~~gt---------~~~~~~vd~~~~g~~~~~~~~~L~~~g---I~v~~~~----- 427 (520)
.++..+|+..+++.|++. .+ +|..++- ...++.+++. + .+.+.++++... +.++.+.
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~--~--~~~~~~f~~~l~l~~~~~slG~~~sl~ 336 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR--S--MEDVHKFIRNLEIPMVAASLGGVESLI 336 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC--C--HHHHHHHHHhCCcceEccCCCCCCeee
Confidence 899999999999999873 33 3333321 2335555653 2 344555555544 3333321
Q ss_pred -CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 428 -VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 428 -~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.|...+ ...++-|||+.. -||.+.+.+-|.+++.
T Consensus 337 ~~p~~~~h~~~~~e~~~~~gi~~~liRlsvG--------lEd~~dLi~dl~~Al~ 383 (384)
T PRK06434 337 TLPVETSHSSLSPEERERLGISDNLVRFSIG--------IEDIDDLIKDIENALS 383 (384)
T ss_pred ECCCccccccCCHHHHHhcCCCcCeEEEEeC--------cCCHHHHHHHHHHHhc
Confidence 122110 011345888754 3677777777766653
No 238
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=1e-16 Score=168.64 Aligned_cols=313 Identities=14% Similarity=0.081 Sum_probs=191.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC---
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 181 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~--- 181 (520)
-.|.|.+++...+.+ +..+.+ ++. ++...++| +++++++|.+. .+..+||++|+.+++..+..
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~---~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~ 123 (401)
T PRK00854 58 CHPKILAAMVEQAGR-LTLTSR---AFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGY 123 (401)
T ss_pred CCHHHHHHHHHHHhh-cccccc---ccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 368888888877753 322222 111 23344454 67788888653 35568999999999987742
Q ss_pred ------CC-CEEEEcCCCCCccccccccccccccccccce---E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcEE
Q 010008 182 ------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLI 246 (520)
Q Consensus 182 ------pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~---~-----~~v~~~~d~~~~~iD~d~le~~i~~~~pklI 246 (520)
+| ++|++.+-.+.|...... .+...... + .+..++ ..|++++++.+.+ ++++|
T Consensus 124 ~~~g~~~~~~~vi~~~~~~HG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~ai 191 (401)
T PRK00854 124 EVKGVPEGQAEIIVCADNFHGRTLSIV-----GFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAF 191 (401)
T ss_pred hccCCCCCCceEEEECCCcCCccHHHH-----hccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEE
Confidence 34 678877755422210000 00000000 0 011111 2489999999987 89999
Q ss_pred EEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccCC--CCceEE
Q 010008 247 IAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--PRGGMI 315 (520)
Q Consensus 247 i~~~s~~p~--~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~G--prgG~I 315 (520)
++.++.+++ ..+ +++|+++|++||+++|+|++|. |+...+.. ..... .+|+++++ |+|.| +++|++
T Consensus 192 i~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v 268 (401)
T PRK00854 192 LVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAV 268 (401)
T ss_pred EEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEE
Confidence 999887765 444 9999999999999999999985 54333310 00111 36888765 99843 578999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC-CCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSD 394 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~-gt~ 394 (520)
++++ ++.+.+.........+++... .++...+|+.+... ...+++.++.+.+.+.|++.+...+.. ...
T Consensus 269 ~~~~------~~~~~l~~~~~~~t~~~~~~~-~aa~~a~L~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~ 338 (401)
T PRK00854 269 LSNS------EVLGVLKPGQHGSTFGGNPLA-CAVARAALKVLTEE---GMIENAAEMGAYFLEGLRSIRSNIVREVRGR 338 (401)
T ss_pred EEcH------HHHhcccCCCCCCCCCcCHHH-HHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHhhccCceEEEecc
Confidence 9988 566655432222233443333 33334466654332 245677777888889898765432211 112
Q ss_pred CeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
..++.+.+.....+..++.+.|.+.||.+.. ...+.||++++.. .+++|++++.+.|++++.
T Consensus 339 g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~---------~~~~~lR~~p~~~----~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 339 GLMLAVELEPEAGGARQYCEALKERGLLAKD---------THDHTIRLAPPLV----ITREQVDWALEQIAKVLA 400 (401)
T ss_pred ceEEEEEEecCchhHHHHHHHHHHCCeEEec---------CCCCEEEEeCCcc----cCHHHHHHHHHHHHHHhh
Confidence 3444455533323456777888888999842 1246899987643 458999999999988763
No 239
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=5.5e-17 Score=170.36 Aligned_cols=309 Identities=15% Similarity=0.172 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhC--C-CCCEEEEcCCCCCcccccccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all--~-pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
.-.+.+...+++++++|++..+. -+.+.+|| .++.+++.++- + +||+|+++..+|.+. .+.+.+.|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~--------~kAi~~~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSC--------IKAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHH--------HHHHHHcC
Confidence 34445555578999999983221 23346677 57777777763 2 699999988654322 13566777
Q ss_pred ceEEEEEcc--cCCCCCCCCHHHHHHHhhhc--CCcEEEEcCCC-CC--CCCCHHHHHHHHHHhCCEEEEechhhccccc
Q 010008 213 IYFESMPYR--LDESTGLVDYDMLEKTAILF--RPKLIIAGASA-YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVA 285 (520)
Q Consensus 213 ~~~~~v~~~--~d~~~~~iD~d~le~~i~~~--~pklIi~~~s~-~p--~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~ 285 (520)
. +++.++ ++++++.+|+++|++++++. +..+++++.++ ++ ...|+++|.++|+++|+++++|+||..+...
T Consensus 173 ~--~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~ 250 (444)
T TIGR03531 173 F--EPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK 250 (444)
T ss_pred C--eEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh
Confidence 6 666666 45567899999999999863 34555665554 33 2789999999999999999999998754322
Q ss_pred cccc-CCCCC--cccEEEeccCcccCCCC-ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCc
Q 010008 286 ASVV-ADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 361 (520)
Q Consensus 286 ~~~~-~~p~~--~aDiv~~S~hK~l~Gpr-gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~ 361 (520)
.... ...+. .+|++++|+||++..|. ||+|+++++ ++.+.+... +++... ...... ++.++......
T Consensus 251 ~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~-y~g~~~--~s~~~~-~~~~ll~~G~~ 321 (444)
T TIGR03531 251 YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS-YPGRAS--ASPSLD-VLITLLSLGSK 321 (444)
T ss_pred hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh-ccCCCC--ChHHHH-HHHHHHHhCHH
Confidence 1111 11122 37999999999997654 567778664 677766653 333221 112222 23344444456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH----CCCEEecCCCCCeeEE-EEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCC
Q 010008 362 EFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSAL 435 (520)
Q Consensus 362 ~~~~~~~~i~~na~~l~~~L~~----~G~~v~~~gt~~~~~~-vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~ 435 (520)
+++++.++..++++++.+.|.+ .|.+++.. ..|.+.+ +.+... +-+...+-..|-..+|.-...-.||+....
T Consensus 322 g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~ 400 (444)
T TIGR03531 322 GYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTV 400 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEE
Confidence 7889999999999999999876 46777642 2344332 233211 223455666666555532211124442111
Q ss_pred CCCEEE-Ecc-------CCcc---ccCCCHHHHHHHHHHHHHH
Q 010008 436 VPGGIR-IGS-------PAMT---TRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 436 ~~~giR-ig~-------~~~t---t~g~~~~d~~~la~~i~~~ 467 (520)
+...++ +|. |.+| ..|++.+|++.+.+.++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 401 GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 110111 111 1222 3699999999999988765
No 240
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=3.8e-17 Score=172.67 Aligned_cols=157 Identities=20% Similarity=0.231 Sum_probs=122.0
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++.++++| +++++++|.++ .|.+.||++|+.+++.+++++||+|++++..|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~----~~l~~~G 128 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH----YTLRRFG 128 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH----HHHhhCC
Confidence 456677777 67889999876 2557899999999999999999999999988876421100 0011234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.+++.++++ |++++++++++ +||+|++..++||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 129 --i~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (433)
T PRK08134 129 --IETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-----L 194 (433)
T ss_pred --eEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 366665542 89999999988 89999999888885 78999999999999999999999887754 2
Q ss_pred CCCC-cccEEEeccCcccCCCCc---eEEE
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG---GMIF 316 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg---G~I~ 316 (520)
.|+. ++|++++|.||++.|+.. |+++
T Consensus 195 ~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 RPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred CchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 3455 799999999999977652 5554
No 241
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.78 E-value=1.4e-17 Score=182.09 Aligned_cols=296 Identities=18% Similarity=0.166 Sum_probs=198.5
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 010008 143 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 221 (520)
Q Consensus 143 ~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~ 221 (520)
.+++.++++||++...+ +++|| .+|.++++++++|||+||+...+|-+.+ || .+.++|. .++++.
T Consensus 178 eAq~~AA~~fgAd~tyF-----lvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg------aLiLsGa--~PVYl~ 243 (720)
T PRK13578 178 DAQKHAAKVFNADKTYF-----VLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG------ALIQAGA--TPVYLE 243 (720)
T ss_pred HHHHHHHHHhCCCceEE-----EeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH------HHHHcCC--eEEEee
Confidence 35688999999997532 36787 8999999999999999999988776543 32 1334565 566543
Q ss_pred cCC-CC---CCCCHHH-----HHHHhhhc--------CC-cEEEEcCCCCCC-CCCHHHHHHH-HHHhCCEEEEechhhc
Q 010008 222 LDE-ST---GLVDYDM-----LEKTAILF--------RP-KLIIAGASAYPR-DFDYPRMRQI-ADAVGALLMMDMAHIS 281 (520)
Q Consensus 222 ~d~-~~---~~iD~d~-----le~~i~~~--------~p-klIi~~~s~~p~-~~d~~~i~~i-a~~~g~~li~D~Ah~~ 281 (520)
..- .. +.|+.+. |++++.++ +| |++++.+|+|-+ ..|++.|.++ ++.++ +|++|+||++
T Consensus 244 P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 221 11 3456544 88888764 23 889998888866 7899999998 68888 9999999987
Q ss_pred ccccccc----cCCCCC-ccc----EEEeccCcccCCCCc-eEEEeeCCCcch-hh--HHHhhcccCCCCCCCCChHHHH
Q 010008 282 GLVAASV----VADPFK-YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVLG-VE--LESAINNAVFPGLQGGPHNHTI 348 (520)
Q Consensus 282 gli~~~~----~~~p~~-~aD----iv~~S~hK~l~Gprg-G~I~~~~~~~~~-~~--l~~~i~~~~~p~~~g~p~~~~i 348 (520)
.+.+... .++.+. ++| +++.|+||+|++... .+|..++....+ .. -.++++.+..-....+|+...+
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~Lm 402 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLF 402 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHH
Confidence 7655442 122233 789 999999999988655 677775521000 00 0234554433333578999999
Q ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH-HH-CCCEEecC---------------------------CC------
Q 010008 349 GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL-VE-LGYKLVSG---------------------------GS------ 393 (520)
Q Consensus 349 aala~al~~~~~~~~~~~~~~i~~na~~l~~~L-~~-~G~~v~~~---------------------------gt------ 393 (520)
|++.+|-..+.....++..++..+.+..+++.| +. .+++++.+ +.
T Consensus 403 ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~ 482 (720)
T PRK13578 403 AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFE 482 (720)
T ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccc
Confidence 999987766654344677778888888888888 33 46665521 00
Q ss_pred ---------CCeeEEEEecCCCCC------------HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 394 ---------DNHLVLVDLRPMGID------------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 394 ---------~~~~~~vd~~~~g~~------------~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
|..=+++.+ .|++ +..+.+.|++.||.+.+.. ...+= .+.+.|.
T Consensus 483 ~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL----~l~s~g~ 547 (720)
T PRK13578 483 GYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSIL----FLLTPAE 547 (720)
T ss_pred cccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEE----EEeCCCC
Confidence 111112222 2444 7889999977799997642 11222 2555678
Q ss_pred CHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGV 468 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l 468 (520)
++++++++.+.|.+.-
T Consensus 548 t~~~~~~Lv~aL~~f~ 563 (720)
T PRK13578 548 DMAKLQQLVAMLARFE 563 (720)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999999888763
No 242
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=3.8e-17 Score=169.96 Aligned_cols=292 Identities=15% Similarity=0.054 Sum_probs=183.0
Q ss_pred CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccc
Q 010008 132 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 211 (520)
Q Consensus 132 ~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~ 211 (520)
.|++..+.+| ++++.+.+.+. .|.++||++|+.+++.++++|||+|+++++.|+++..... ..+...
T Consensus 61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRL 127 (395)
T ss_pred CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhc
Confidence 3677777777 56777777554 4667899999999999999999999999998876532110 012233
Q ss_pred cceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhccccccccc
Q 010008 212 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 289 (520)
Q Consensus 212 g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~ 289 (520)
|. ++..++.+ +.+.+++++++ +||+|++++|+||. ..|+++|+++|+++|+++++|+++..++ .
T Consensus 128 Gi--~v~~vd~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~ 193 (395)
T PRK05967 128 GV--EVEYYDPE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y 193 (395)
T ss_pred Ce--EEEEeCCC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence 54 44444321 35789999988 89999999998886 6799999999999999999999865432 2
Q ss_pred CCCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHH
Q 010008 290 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 365 (520)
Q Consensus 290 ~~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~ 365 (520)
..|++ |+|+++.|++|++.|.. +|++..++ ++.+++..... ..|+... ...+ ...++.+ .-+..
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~------~~~~~l~~~~~--~~G~~~~-p~da-~l~~rgl--~Tl~l 261 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE------KCWPQLLEAHG--TLGLCAG-PDDT-YQILRGL--RTMGI 261 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH------HHHHHHHHHHH--HcCCCCC-HHHH-HHHHcCc--ccHHH
Confidence 35666 89999999999987744 37776655 44444432111 1232211 1111 1122322 23466
Q ss_pred HHHHHHHHHHHHHHHHHHC-CC-EEecCCC---------------CCeeEEEEecCC-CCCHHHHHHHHhhcCe---EEc
Q 010008 366 YQNKVVSNCRALASRLVEL-GY-KLVSGGS---------------DNHLVLVDLRPM-GIDGARVEKILDMASI---TLN 424 (520)
Q Consensus 366 ~~~~i~~na~~l~~~L~~~-G~-~v~~~gt---------------~~~~~~vd~~~~-g~~~~~~~~~L~~~gI---~v~ 424 (520)
++++..+|+..+++.|++. .+ +|..++- .+.++.+++... ..+.+.+.++++...+ .++
T Consensus 262 R~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~s 341 (395)
T PRK05967 262 RLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYS 341 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccC
Confidence 7888999999999999883 44 3433321 122445555311 0123445555555443 333
Q ss_pred CCCC------CCCC----C--CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 425 KNSV------PGDK----S--ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 425 ~~~~------Pg~~----~--~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+.. +.-. . ....+-|||+.. -||.+.+.+-|.+++..
T Consensus 342 lG~~~sLi~~~~~~~~~~~~~~~~~~liRlSvG--------lEd~~dLi~Dl~~Al~~ 391 (395)
T PRK05967 342 WGGYESLALHVKLGDRTVAKAPYAGPVIRLQIG--------LEDVPDLKADLERGFAA 391 (395)
T ss_pred CCCcceeeeeCCCChhHhhhccCCCCeEEEEec--------cCCHHHHHHHHHHHHHh
Confidence 2210 1000 0 011245898754 36777788777777764
No 243
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.9e-17 Score=170.84 Aligned_cols=156 Identities=22% Similarity=0.228 Sum_probs=120.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccce
Q 010008 135 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 214 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~ 214 (520)
+..+.+| +.+++++|.+. .+...||++|+.+++.++++|||+|++.++.|++...... ..+...|.
T Consensus 63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~- 128 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGW- 128 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCc-
Confidence 4456676 67889999876 3556899999999999999999999999988876532110 01122343
Q ss_pred EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCC
Q 010008 215 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 292 (520)
Q Consensus 215 ~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p 292 (520)
+++.++. .|++++++++++ ++|+|++..++||+ ..|+++|.++|+++|+++++|++|..+.. ..|
T Consensus 129 -~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~p 195 (427)
T PRK05994 129 -QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IRP 195 (427)
T ss_pred -EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CCc
Confidence 5555442 388999999987 89999999888886 78999999999999999999999876543 245
Q ss_pred CC-cccEEEeccCcccCCCCc---eEEEe
Q 010008 293 FK-YCDVVTTTTHKSLRGPRG---GMIFF 317 (520)
Q Consensus 293 ~~-~aDiv~~S~hK~l~Gprg---G~I~~ 317 (520)
+. ++|+++.|+||++.|+.+ |+++.
T Consensus 196 l~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 196 IEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred cccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 55 799999999999987653 66653
No 244
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.77 E-value=7.8e-17 Score=173.22 Aligned_cols=307 Identities=17% Similarity=0.169 Sum_probs=189.7
Q ss_pred chhHHHHHHHHHHHHHHHcCCCC------------CCCceeeecCChHHHHHHHHHhh----CC----------------
Q 010008 134 NEYIDELETLCQKRALAAFNLDE------------NKWGVNVQPLSGSPANFEVYTAI----LK---------------- 181 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~------------~~~~~~V~~~sGs~A~~~~l~al----l~---------------- 181 (520)
.+...++|..+.+|++++++..+ ..++ +..++||+||+.++.+- ++
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G--~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~ 201 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLG--AFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAA 201 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCe--EEcCchHHHHHHHHHHHHHHhccccccccccccccchhh
Confidence 34467899999999999986321 1122 33456679998876652 21
Q ss_pred ------CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCCCCCHHHHHHHhhh---cCCcEEEEc--
Q 010008 182 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAG-- 249 (520)
Q Consensus 182 ------pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~~~iD~d~le~~i~~---~~pklIi~~-- 249 (520)
+++.|++.+..|.+. . +.....|.+ .+++.+++| +++.+|+++|++++++ .+++.+++.
T Consensus 202 ~~~~~~~~~~v~~S~~~H~S~---~-----kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvat 272 (522)
T TIGR03799 202 LKHYGYDGLAILVSERGHYSL---G-----KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGV 272 (522)
T ss_pred hhhccCCceEEEECCCchHHH---H-----HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 134566665544332 1 233344432 145566777 5789999999998863 144444332
Q ss_pred --CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccC---CCCCcccEEEeccCcccCCCCc-eEEEeeCCCcc
Q 010008 250 --ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 323 (520)
Q Consensus 250 --~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~---~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 323 (520)
.+..+...|+++|+++|+++|+|+++|+||..+....+.+. ..++.+|.+++++|||+.+|.| |+++++++
T Consensus 273 aGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~--- 349 (522)
T TIGR03799 273 AGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP--- 349 (522)
T ss_pred ecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH---
Confidence 22334488999999999999999999999875554333221 1123689999999999999998 99999874
Q ss_pred hhhHHHhhccc---C---------CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEec
Q 010008 324 GVELESAINNA---V---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVS 390 (520)
Q Consensus 324 ~~~l~~~i~~~---~---------~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~ 390 (520)
++.+.+... . ..+++|+.....+ .+..+++.+...++++..++..+.++++.+.|.+ .+++++.
T Consensus 350 --~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~ 426 (522)
T TIGR03799 350 --ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT 426 (522)
T ss_pred --HHHHHhccCcchhcCCCCCccccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec
Confidence 332222210 0 0123455554443 4777888887788999999999999999999987 5899987
Q ss_pred CCCCCeeEEEEecCCCCC--------------H-------HHHHHHHhhcCeEE-cCCCCCCCC-CCCCCCEEEEcc-CC
Q 010008 391 GGSDNHLVLVDLRPMGID--------------G-------ARVEKILDMASITL-NKNSVPGDK-SALVPGGIRIGS-PA 446 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~g~~--------------~-------~~~~~~L~~~gI~v-~~~~~Pg~~-~~~~~~giRig~-~~ 446 (520)
+.. -+++.+.+.+.++. . ..+.+.+.+.|... +...+.+.. .....-.+|+.+ ..
T Consensus 427 ~p~-l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np 505 (522)
T TIGR03799 427 EPE-LCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANP 505 (522)
T ss_pred CCC-ccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCC
Confidence 642 33444444343220 0 23455555666543 322121111 001124589865 22
Q ss_pred ccccCCCHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIAD 462 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~ 462 (520)
.| +++|++.+.+
T Consensus 506 ~t----t~~~i~~~l~ 517 (522)
T TIGR03799 506 LT----THEILQDILD 517 (522)
T ss_pred CC----CHHHHHHHHH
Confidence 33 4788887654
No 245
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=6.7e-17 Score=167.84 Aligned_cols=281 Identities=18% Similarity=0.178 Sum_probs=173.2
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++....+| +.++++++ .+ .|.++||+.|+.+++.++++|||+|++.++.|++...... ..+...|.
T Consensus 50 ~p~~~~Le----~~lA~l~~--~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~----~~l~~~G~ 115 (366)
T PRK07582 50 NPTWRALE----AALGELEG--AE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR----EYLAPLGV 115 (366)
T ss_pred CccHHHHH----HHHHHHcC--CC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH----HHHhcCeE
Confidence 34456676 56777772 22 4667999999999999999999999999887754321100 01112343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
+++.++.+. . .+ .+.+ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|.... + ..
T Consensus 116 --~v~~v~~~~-~----~~----~~~~-~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~~ 178 (366)
T PRK07582 116 --TVREAPTAG-M----AE----AALA-GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--QR 178 (366)
T ss_pred --EEEEECCCC-h----HH----Hhcc-CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--cC
Confidence 666655431 1 11 2234 78999999999987 6799999999999999999999975321 1 13
Q ss_pred CCC-cccEEEeccCcccCCCCc---eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 292 PFK-YCDVVTTTTHKSLRGPRG---GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~Gprg---G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
|+. ++|++++|+||++.|+.| |+++++++ ++.+++..... .....+... -+. .++..+. .+....
T Consensus 179 p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~~~~-~~g~~~~~~-~a~--l~~r~l~--tl~~R~ 247 (366)
T PRK07582 179 PLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVERWRL-LAGAIPGPF-EAW--LAHRSLG--TLGLRF 247 (366)
T ss_pred chhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHHHHH-HhCCCCCHH-HHH--HHHhccc--cHHHHH
Confidence 444 689999999999988764 99988653 56555543211 111111111 111 1222222 245667
Q ss_pred HHHHHHHHHHHHHHHH-CCCE-EecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCC
Q 010008 368 NKVVSNCRALASRLVE-LGYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPG 430 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~-~G~~-v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg 430 (520)
++..+|+..+++.|++ ..+. +..++- .+.++.+++. +.+.+.++|+..+|.....++ |
T Consensus 248 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l~~~~~~~s~-G 322 (366)
T PRK07582 248 ARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAASRLVVAATSF-G 322 (366)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhCCcceecccC-C
Confidence 8888999999999988 3443 332221 1234455553 457788888888876532211 1
Q ss_pred CC-C----------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 431 DK-S----------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 431 ~~-~----------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+. + ...++-||++... |+.+.+.+-+.+++.
T Consensus 323 ~~~sl~~~~~~~~~~~~~~liR~svGl--------E~~~dli~dl~~al~ 364 (366)
T PRK07582 323 GVHTSADRRARWGDAVPEGFVRLSCGI--------EDTDDLVADLERALD 364 (366)
T ss_pred CccchhhhHHHcCCCCCCCeEEEEecc--------CCHHHHHHHHHHHHh
Confidence 10 0 1224579998763 445555555555543
No 246
>PLN02880 tyrosine decarboxylase
Probab=99.77 E-value=1e-16 Score=171.92 Aligned_cols=313 Identities=14% Similarity=0.106 Sum_probs=191.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhCC-----C-----CC-EEEEcCCCCCccccc
Q 010008 135 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----P-----HD-RIMGLDLPHGGHLSH 199 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~----~~~V~~~sGs~A~~~~l~all~-----p-----GD-~Vl~~~~~~~ghls~ 199 (520)
+...++|..+.+|+++++|.+.+.+ +.-+..++||+||+.++.+.-+ . .. .|++.+- +|++.
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~Sv 194 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSAL 194 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHHH
Confidence 3467899999999999999986421 1123345567999877654311 1 12 2333332 24332
Q ss_pred cccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEcC--CCCCCCCCHHHHHHHHHHhC
Q 010008 200 GFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAGA--SAYPRDFDYPRMRQIADAVG 270 (520)
Q Consensus 200 g~~~~~~~v~~~g~~~-~~v~~~~d~-~~~~iD~d~le~~i~~~-----~pklIi~~~--s~~p~~~d~~~i~~ia~~~g 270 (520)
- +...+.|.+. .++.+++|. +++.+|+++|++++.+. .|-+|+.+. ++.+...|+++|+++|+++|
T Consensus 195 ~-----Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 195 Q-----KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred H-----HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 2 3556666542 234455653 35789999999998642 255666553 33344889999999999999
Q ss_pred CEEEEechhhcccccccccC---CCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhh-------cccC----
Q 010008 271 ALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI-------NNAV---- 335 (520)
Q Consensus 271 ~~li~D~Ah~~gli~~~~~~---~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i-------~~~~---- 335 (520)
+|+++|+||..+......+. ..+..+|.++.++|||+..|.+ |++++++.. .+.+.+ ....
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~----~l~~~~~~~~~Yl~~~~~~~~ 345 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN----ALIQSLSTNPEFLKNKASQAN 345 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH----HHHHHHccCHHHhcCcccccc
Confidence 99999999876644332211 1234689999999999999998 888888631 111111 1000
Q ss_pred --C--C--CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEecCCCCC
Q 010008 336 --F--P--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGID 408 (520)
Q Consensus 336 --~--p--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~~~g~~ 408 (520)
+ . ..+.+-.... ..+..+|+.....++.++.++..+.++++.+.|.+ .+++++.+. +..++.+.+.+.+.+
T Consensus 346 ~~~~~~~~~i~~~rr~~a-lklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~~~~ 423 (490)
T PLN02880 346 SVVDYKDWQIPLGRRFRS-LKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPPKNN 423 (490)
T ss_pred CCCChhccCcCCCCcccH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCCCCC
Confidence 0 0 0111111111 23444566655567788888888999999999977 589998763 234455555443322
Q ss_pred H-------HHHHHHHh-hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 409 G-------ARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 409 ~-------~~~~~~L~-~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
. ..+.+.|. +..+.+....+. +..++|++..... .+++|++.+.+.|.++...
T Consensus 424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~------g~~~lR~~~~n~~---tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 424 EDNGNKLNHDLLDAVNSSGKIFISHTVLS------GKYVLRFAVGAPL---TEERHVTAAWKVLQDEASK 484 (490)
T ss_pred hhhHHHHHHHHHHHHHhCCCEEEEEEEEC------CEEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Confidence 1 12333443 345555433222 2458999765333 4589999999999887543
No 247
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.77 E-value=2.3e-16 Score=164.52 Aligned_cols=321 Identities=17% Similarity=0.151 Sum_probs=192.5
Q ss_pred cceEecC--CC---CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 95 SLELIAS--EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 95 ~i~Lias--en---~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
.|++..+ .| +.+|.|.+++...+.+.- ....+ |. .+...++| +++++++|.+. -+...||+
T Consensus 29 ~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~-~~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg~ 94 (379)
T TIGR00707 29 YLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVSNL-YY-TEPQEELA----EKLVEHSGADR-----VFFCNSGA 94 (379)
T ss_pred EEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---ccccc-cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcH
Confidence 4555542 33 345888888887765321 11112 22 23344444 78889999863 24456788
Q ss_pred HHHHHHHHhh---CC----CCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC-C--CCCHHHHHHHh
Q 010008 170 PANFEVYTAI---LK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTA 238 (520)
Q Consensus 170 ~A~~~~l~al---l~----pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~-~--~iD~d~le~~i 238 (520)
+|+.+++.++ .. +||+|+++++.|.|+...... ..+.. +.....++..+. . ..|++++++.+
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 167 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALS-------ATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAI 167 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHH-------hcCChhhhccCCCCCCCceeeCCCCHHHHHHHh
Confidence 9999888755 22 479999999876444221110 01100 000111121111 1 12899999998
Q ss_pred hhcCCcEEEEcCCCCCC-C--C---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-cccEEEeccCccc-
Q 010008 239 ILFRPKLIIAGASAYPR-D--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL- 307 (520)
Q Consensus 239 ~~~~pklIi~~~s~~p~-~--~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~aDiv~~S~hK~l- 307 (520)
++ ++++|+++.+++++ . . ++++|.++|+++|+++++|++|. ++...+. ..++ . ..|++ +++|++
T Consensus 168 ~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~-~~~~~~~~~~~d~~--t~sK~~~ 242 (379)
T TIGR00707 168 DD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGK-FFAYEHYGIEPDII--TLAKGLG 242 (379)
T ss_pred hh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccch-hhhHHhcCCCCCEE--EEccccc
Confidence 87 89999997555443 2 2 37899999999999999999974 5533321 1111 1 34665 467998
Q ss_pred CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCE
Q 010008 308 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 387 (520)
Q Consensus 308 ~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~ 387 (520)
+|+|.|++++++ ++.+.+.........++ +...+++...+|+.+.. .++.+++.++++.+.+.|.+.+..
T Consensus 243 ~G~riG~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 312 (379)
T TIGR00707 243 GGVPIGATLAKE------EVAEAFTPGDHGSTFGG-NPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKN 312 (379)
T ss_pred CCcccEEEEEcH------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 567889999987 67776654322222333 33344444456765432 245667777788888887764322
Q ss_pred Ee-cC-CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 388 LV-SG-GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 388 v~-~~-gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
.. .. .....++++.+.. +..++.+.|.+.||.+. |+ ..+++||+.+.. .++++++++.+.|+
T Consensus 313 ~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~----~t~~~i~~~~~~l~ 376 (379)
T TIGR00707 313 YPNKEVRGKGLMLGIELEA---PCKDIVKKALEKGLLVN----CA-----GPKVLRFLPPLI----ITKEEIDEAVSALE 376 (379)
T ss_pred CCCCccccCceEEEEEecC---cHHHHHHHHHHCCcEEe----eC-----CCCEEEEECCCc----CCHHHHHHHHHHHH
Confidence 21 10 0123455666542 35678888999999994 32 246899986543 34799999999987
Q ss_pred HH
Q 010008 466 EG 467 (520)
Q Consensus 466 ~~ 467 (520)
++
T Consensus 377 ~~ 378 (379)
T TIGR00707 377 EA 378 (379)
T ss_pred Hh
Confidence 65
No 248
>PLN02452 phosphoserine transaminase
Probab=99.77 E-value=3e-16 Score=162.01 Aligned_cols=334 Identities=15% Similarity=0.141 Sum_probs=213.0
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccCCCCC--CCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKYSEGL--PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 171 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~--p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A 171 (520)
..+++.+++..+|+.|++++...+.+.-..|. .. -...+.++.+.++ .+++.++++++++. ++.+.+...+||.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~-~sHRs~~f~~i~~-~~~~~L~~l~~~p~-~y~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVME-MSHRGKEFLSIIQ-KAEADLRELLDIPD-NYEVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccc-cCCCchHHHHHHH-HHHHHHHHHhCCCC-CceEEEEeCccHHH
Confidence 35789999999999999999988764322222 11 0122445555554 57789999999853 34355555777899
Q ss_pred HHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 172 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
+.++++.++.+||++++... |.++..+. +.....|........+-...+..+|+++++. .+ +.+.|.+.+.
T Consensus 84 ~ea~~~nl~~~~~~~l~~~~---G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~~hn 154 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVVT---GSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TP-DAKFVHICAN 154 (365)
T ss_pred HHHHHHhcCCCCCeEEEEEC---CHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CC-CCcEEEECCC
Confidence 99999999999999998863 33332221 1112233311111111111112567776522 22 4677777654
Q ss_pred CCCC--C-CCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhH
Q 010008 252 AYPR--D-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 327 (520)
Q Consensus 252 ~~p~--~-~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l 327 (520)
..++ . .|++++. ++++++|+++..|....+ +...++..+|.||.+ ||.| |+++.++ ++
T Consensus 155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pid-----v~~~~v~~~saqK~l-GP~Gl~~v~vr~------~~ 216 (365)
T PLN02452 155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVD-----VSKYGVIYAGAQKNV-GPSGVTIVIIRK------DL 216 (365)
T ss_pred CCCCcEecCcccccC------CCeEEEECCccccCcccC-----HHHcCEEEEeccccc-CCCCeEEEEEcH------HH
Confidence 4333 2 4565553 389999999887765332 222345557999988 7998 9999988 44
Q ss_pred HHhhcccC---C--------CCCCCCChHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHH-CCCEEe-cC-C
Q 010008 328 ESAINNAV---F--------PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVE-LGYKLV-SG-G 392 (520)
Q Consensus 328 ~~~i~~~~---~--------p~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~-~G~~v~-~~-g 392 (520)
.+++.... + ..+.++|+.+.+.++..+|+.+.+. +++...++..+.++++.+.|.+ .|+... .. .
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 43332211 0 0123799999999999999988765 6889999999999999999988 577111 11 1
Q ss_pred CCCe-eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 393 SDNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 393 t~~~-~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
..+. .+.+.+.... ..+.+.+.+++.|+.. ++|+.+ -+++|+|+-. .++.++++.+++++++.-+
T Consensus 297 ~rs~~~vsF~~~~~~-~~~~f~~~~~~~g~~~----~~G~r~---~gg~R~s~yn----a~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 297 VRSLMNVPFTLGGSE-LEAEFVKEAAKAGMVQ----LKGHRS---VGGMRASIYN----AMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HhCCeEEEEEcCCch-hHHHHHHHHHHCCCcc----cCCccc---cCceEEECcC----CCCHHHHHHHHHHHHHHHH
Confidence 0122 2233333222 3456788899999998 777753 3459998732 3668999999999987543
No 249
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.1e-17 Score=170.99 Aligned_cols=160 Identities=21% Similarity=0.185 Sum_probs=120.7
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +++++++|.+. .+...||+.|+.+++.++++|||+|++.+..|++...-.. ..+...|
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~----~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFH----YTLPKLG 133 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHH----HHhhcCe
Confidence 456677777 67889999886 3566899999999999999999999999877766431100 0011123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
++++.++ ++ .|++++++++++ ++|+|++..++||. ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 134 --i~v~~vd-d~----~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 --IEVSFVE-DP----DDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred --EEEEEEC-CC----CCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3555543 21 389999999987 89999999888876 78999999999999999999999876644 3
Q ss_pred CCCC-cccEEEeccCcccCCCCc---eEEEee
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPRG---GMIFFK 318 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gprg---G~I~~~ 318 (520)
.|+. ++|+++.|+||+++|+.+ |.++.+
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CchhcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 4455 799999999999977653 444433
No 250
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.9e-17 Score=169.86 Aligned_cols=160 Identities=22% Similarity=0.180 Sum_probs=121.4
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +.++++.|.+. .+.+.||+.|+.+++.++++|||+|+++++.|++.+... ...+...|
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~----~~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLF----AHTLPKLG 128 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHH----HHHHHhCC
Confidence 455677777 67889999765 356789999999999999999999999998887643211 01122234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +++.+++ .|++++++++++ ++++|++.+++||+ ..|+++|.++|+++|+++|+|+++..+.. .
T Consensus 129 v--~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~ 194 (431)
T PRK08248 129 I--TVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L 194 (431)
T ss_pred E--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence 3 6666543 389999999987 89999999888886 78999999999999999999999764432 2
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeC
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 319 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~ 319 (520)
.|+. ++|+++.|+||+++|+. ||+++.+.
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 3444 79999999999998775 35555443
No 251
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.77 E-value=2.9e-17 Score=170.41 Aligned_cols=288 Identities=21% Similarity=0.244 Sum_probs=180.2
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ++++++.|.+. -+...||..|+.+++.+++++||+|+.++..|++...... .-....|
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~----~~l~~~g 119 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLE----ELLPRFG 119 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHH----HCHHHTT
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhh----hhhcccC
Confidence 678888888 67889999864 2446899999999999999999999999988876532111 1111234
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhC-CEEEEechhhccccccccc
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVV 289 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g-~~li~D~Ah~~gli~~~~~ 289 (520)
. ++..++ .-|++++++++++ ++++|++..|.||. ..|+++|+++|+++| +++++|.+...++ .
T Consensus 120 v--~v~~~d------~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~-----~ 185 (386)
T PF01053_consen 120 V--EVTFVD------PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY-----N 185 (386)
T ss_dssp S--EEEEES------TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----T
T ss_pred c--EEEEeC------chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----e
Confidence 3 554533 2488999999998 99999999999997 789999999999999 9999999855442 3
Q ss_pred CCCCC-cccEEEeccCcccCCCC---ceEEEeeC-CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhH
Q 010008 290 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK-DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 364 (520)
Q Consensus 290 ~~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~-~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~ 364 (520)
..|+. ++|+++.|.+|++.|.. +|.+++++ . ++.+++.... ...|.... ...+. ..++.+. -+.
T Consensus 186 ~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-----~~~~~l~~~~--~~~G~~~~-p~da~-ll~rgl~--Tl~ 254 (386)
T PF01053_consen 186 QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-----ELYDRLREFR--RLLGATLS-PFDAW-LLLRGLR--TLP 254 (386)
T ss_dssp C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-----HHHHHHHHHH--HHHT-B---HHHHH-HHHHHHT--THH
T ss_pred eccCcCCceEEEeeccccccCCcceeeEEEEECchh-----hhhhhhcchh--hhcCccch-HHHHH-HHhcCCC--cHH
Confidence 45676 79999999999998876 58888876 2 4555443211 11222111 11111 1233332 356
Q ss_pred HHHHHHHHHHHHHHHHHHHC-CCE-EecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCeEE---c
Q 010008 365 VYQNKVVSNCRALASRLVEL-GYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASITL---N 424 (520)
Q Consensus 365 ~~~~~i~~na~~l~~~L~~~-G~~-v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v---~ 424 (520)
.+.++..+|+..+++.|.+. .+. |..++- .+.++.+++... .+.+.++++...+.. +
T Consensus 255 ~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~---~~~~~~f~~~l~l~~~~~S 331 (386)
T PF01053_consen 255 LRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG---EEAARRFLDALKLFSIAPS 331 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH---HHHHHHHHHH-SSSEESSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc---hhhhHhHHhhhhhHhhhhh
Confidence 77899999999999999884 443 333321 123556666521 135666666655542 2
Q ss_pred CCC------CCCCCC------------CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 425 KNS------VPGDKS------------ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 425 ~~~------~Pg~~~------------~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+. .|.... ...++-||++.. -||.+.+.+-|+++++
T Consensus 332 lGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG--------lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 332 LGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG--------LEDPDDLIADLEQALE 386 (386)
T ss_dssp -SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE----------SS-HHHHHHHHHHHHH
T ss_pred cCCcccccccccchhhccCChhhhhccCCCCCeeEEEec--------cCCHHHHHHHHHHhcC
Confidence 111 132110 112456898854 3778888888877764
No 252
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=7.1e-17 Score=170.41 Aligned_cols=160 Identities=21% Similarity=0.190 Sum_probs=120.0
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
+++..+.+| +.++++.|.+. .+...||++|+.+++.++++|||+|++.++.|++.+.... ..+...|
T Consensus 56 ~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~----~~l~~~g 122 (425)
T PRK06084 56 MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLA----HTLPRIG 122 (425)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----Hhcccce
Confidence 345567777 67888999764 3456899999999999999999999999988775432110 0111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
.++..++ ..|++++++++++ ++|+|++..++||+ ..|+++|.++|+++|++|++|++|..+.. .
T Consensus 123 --i~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~ 188 (425)
T PRK06084 123 --IETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----C 188 (425)
T ss_pred --eEEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2333332 2489999999987 89999999888886 78999999999999999999999876543 3
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeC
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 319 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~ 319 (520)
.|+. ++|++++|+||++.|+. ||+++.+.
T Consensus 189 ~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 189 RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred ChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 4455 79999999999997754 46666543
No 253
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.77 E-value=4.1e-17 Score=178.27 Aligned_cols=291 Identities=16% Similarity=0.122 Sum_probs=200.7
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 010008 143 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 221 (520)
Q Consensus 143 ~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~ 221 (520)
.+++.+++.||++...+ +++|| .+|.++++++++|||.||+...+|-+.+ |+ +.++|. .++++.
T Consensus 199 eAe~~AA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-ha-------Lilsga--~PVYl~ 263 (714)
T PRK15400 199 EAEEYIARVFNADRSYM-----VTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-HL-------MMMSDV--TPIYFR 263 (714)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHcCC--eEEEec
Confidence 35588999999998532 36887 8999999999999999999988776543 22 445665 666643
Q ss_pred cCC-CC---CCCC-----HHHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhccccccc
Q 010008 222 LDE-ST---GLVD-----YDMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAAS 287 (520)
Q Consensus 222 ~d~-~~---~~iD-----~d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~ 287 (520)
... +. +.|+ .+.|++.+..+ +|+.+++.+|+|-+ ..|++.|.++|+.++ +++|+||++.+.+..
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 221 11 2345 89999998763 34478888888766 789999999999887 789999987765544
Q ss_pred ccC--CCCC-cc---c--EEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHh
Q 010008 288 VVA--DPFK-YC---D--VVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 358 (520)
Q Consensus 288 ~~~--~p~~-~a---D--iv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~ 358 (520)
..+ +++. ++ | +++.|+||+|++... .+|..+... + .++++.+..-....+|+...+|++.+|...+
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v----d-~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV----N-EETFNEAYMMHTTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC----C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 432 4443 55 5 999999999988655 666664421 1 2345544333335789999999999888776
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHH-CC------CEEecCC----------------------------CCCeeEEEEec
Q 010008 359 QSPEFKVYQNKVVSNCRALASRLVE-LG------YKLVSGG----------------------------SDNHLVLVDLR 403 (520)
Q Consensus 359 ~~~~~~~~~~~i~~na~~l~~~L~~-~G------~~v~~~g----------------------------t~~~~~~vd~~ 403 (520)
..+..+...++.++.+..+++.|.+ .+ +.+..+. .|.-=+++.++
T Consensus 417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tp 496 (714)
T PRK15400 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP 496 (714)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeC
Confidence 5434567778888888888888876 34 4444210 01111233333
Q ss_pred C---------CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 404 P---------MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 404 ~---------~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
. .|+++..+.+.|+++||.+.+.. ...+= .+.+.|.++++++++.+.|.+.-
T Consensus 497 gi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iL----fl~s~g~t~~~~~~L~~aL~~f~ 557 (714)
T PRK15400 497 GMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLL----FLFSIGIDKTKALSLLRALTDFK 557 (714)
T ss_pred CCCCCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEE----EEeCCCCCHHHHHHHHHHHHHHH
Confidence 3 46778899999999999997642 12222 24556788999999999887753
No 254
>PRK07049 methionine gamma-lyase; Validated
Probab=99.76 E-value=1e-16 Score=169.41 Aligned_cols=217 Identities=18% Similarity=0.141 Sum_probs=146.9
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++....+| +.+++++|.+. .+...||++|+.+++.++++|||+|++.+|.|+++..... ......|.
T Consensus 82 ~Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi 148 (427)
T PRK07049 82 HPNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGV 148 (427)
T ss_pred CcCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCc
Confidence 34456777 67888998764 4556889999999999999999999999998876532100 00112343
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhh----hcCCcEEEEcCCCCCC--CCCHHHHHHHHHH------hCCEEEEechhhc
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAI----LFRPKLIIAGASAYPR--DFDYPRMRQIADA------VGALLMMDMAHIS 281 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~----~~~pklIi~~~s~~p~--~~d~~~i~~ia~~------~g~~li~D~Ah~~ 281 (520)
+++.++ + ..|++++++.+. ..++|+|++++|+||+ ..|+++|.++|+. +++++++|++...
T Consensus 149 --~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 149 --GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred --EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 444443 1 257777876664 2378999999999997 7899999999988 7999999998432
Q ss_pred ccccccccCCCCC-cccEEEeccCcccCC---CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHH
Q 010008 282 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 357 (520)
Q Consensus 282 gli~~~~~~~p~~-~aDiv~~S~hK~l~G---prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~ 357 (520)
. . ...|+. ++|+++.|++|++.| .|+|+++.++ ++.+++.....+. .++........ +++.
T Consensus 222 ~-~----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~~~~~~-g~~ls~~~a~l---~~r~ 286 (427)
T PRK07049 222 P-V----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRALRSAI-GTQLDPHSCWM---LGRS 286 (427)
T ss_pred c-c----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHHHHHhc-CCCCCHHHHHH---HHcC
Confidence 2 2 123444 689999999999864 5789999876 6666655432211 11111111111 2222
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHC-CCE
Q 010008 358 AQSPEFKVYQNKVVSNCRALASRLVEL-GYK 387 (520)
Q Consensus 358 ~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~ 387 (520)
+ ..+...+++..+|++.+++.|++. ++.
T Consensus 287 L--~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 287 L--ETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred C--ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 2 234666788899999999999884 543
No 255
>PRK07505 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-15 Score=160.59 Aligned_cols=331 Identities=16% Similarity=0.157 Sum_probs=188.2
Q ss_pred cceEecCCCCC----hHHHHHHHhhhhhccCC-CCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 95 SLELIASENFT----SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 95 ~i~Liasen~~----~~~V~ea~~s~l~~~y~-~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
.|++... +++ +|.|++|+...+. +|. .+....+.....+...++ ++++++++|. + .+..+||+
T Consensus 48 ~ld~~s~-~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~l----~~~la~~~~~--~----~~~~~sG~ 115 (402)
T PRK07505 48 FVNFVSC-SYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKDL----EEALSELFGA--S----VLTFTSCS 115 (402)
T ss_pred EEEeecC-CccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHHH----HHHHHHHhCC--C----EEEECChH
Confidence 4666543 333 7999999998875 332 111111111123333333 4788889987 2 24457999
Q ss_pred HHHHHHHHhh----CCCCC-EEEEcCC-CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC
Q 010008 170 PANFEVYTAI----LKPHD-RIMGLDL-PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 243 (520)
Q Consensus 170 ~A~~~~l~al----l~pGD-~Vl~~~~-~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~p 243 (520)
+|+..++..+ ..+|+ .|++.+. .|++. +. + ......+. +++.++. .|++++++++++ ++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~-~~-~----~~~~~~~~--~v~~~~~------~d~~~l~~~~~~-~~ 180 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASL-NI-L----KGICADET--EVETIDH------NDLDALEDICKT-NK 180 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhH-Hh-h----hhhhhcCC--eEEEeCC------CCHHHHHHHHhc-CC
Confidence 9998776432 22343 2545543 23221 10 0 01111122 4444432 488999998876 67
Q ss_pred cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhccccc-ccc--c--CCC--CCcccEEEeccCcccCCCCceE
Q 010008 244 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV--V--ADP--FKYCDVVTTTTHKSLRGPRGGM 314 (520)
Q Consensus 244 klIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~-~~~--~--~~p--~~~aDiv~~S~hK~l~GprgG~ 314 (520)
+++++..|+||+ ..++++|.++|+++|++||+|++|..+... .+. . ... .+...+++.|++|.+.++ ||+
T Consensus 181 ~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~ 259 (402)
T PRK07505 181 TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGV 259 (402)
T ss_pred CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeE
Confidence 888888777775 789999999999999999999998543221 111 0 011 112247778999998655 788
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 393 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt 393 (520)
+++.++ ++.+.+.....+.. .++++...+++...+++....+.+.+..+++.++.+.+.+.+... ..+.
T Consensus 260 ~~~~~~-----~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~ 329 (402)
T PRK07505 260 IMLGDA-----EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGS 329 (402)
T ss_pred EEeCCH-----HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCC
Confidence 876442 56666654333332 234444556555556664444444555555555554433322211 1111
Q ss_pred CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 394 DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 394 ~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
...+.++.+.. ..+...+.+.|.+.||.+.....|.. +.....|||+.+.. .+++|++++++.|++++..
T Consensus 330 ~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~----~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 330 FLPIRLIYIGD-EDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRAS----HTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCEEEEEeCC-HHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCcc----CCHHHHHHHHHHHHHHHHh
Confidence 11222222221 11245677888889999965433321 11236899987754 3589999999999988764
No 256
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.76 E-value=1.5e-16 Score=173.75 Aligned_cols=291 Identities=16% Similarity=0.124 Sum_probs=198.6
Q ss_pred HHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcc
Q 010008 143 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 221 (520)
Q Consensus 143 ~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~ 221 (520)
.+++.+++.||++...+ +++|| .+|.++++++++|||+||+...+|-+.+ |+ +.++|. .++++.
T Consensus 199 eAe~~aA~~fgAd~tyf-----vvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~a-------Lilsga--~PVYl~ 263 (713)
T PRK15399 199 EAEEYIARTFGAEQSYI-----VTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-HL-------LMMSDV--VPIWLK 263 (713)
T ss_pred HHHHHHHHHhCCCcEEE-----EeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHcCC--eeEEec
Confidence 35578899999997532 36887 8999999999999999999988776543 22 345565 666643
Q ss_pred cCC-CC---CCCCH-----HHHHHHhhhc----CCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEE-EEechhhcccccc
Q 010008 222 LDE-ST---GLVDY-----DMLEKTAILF----RPKLIIAGASAYPR-DFDYPRMRQIADAVGALL-MMDMAHISGLVAA 286 (520)
Q Consensus 222 ~d~-~~---~~iD~-----d~le~~i~~~----~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~l-i~D~Ah~~gli~~ 286 (520)
... +. +.|+. +.|++++.++ +|+.+++.+|+|-+ ..|++.|.++| |+.+ ++|+||++.+.+.
T Consensus 264 P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 264 PTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 221 11 34555 8898888753 45688888888866 78999999988 6776 6999998766544
Q ss_pred cccC--CCCC---cccEE---EeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHH
Q 010008 287 SVVA--DPFK---YCDVV---TTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 357 (520)
Q Consensus 287 ~~~~--~p~~---~aDiv---~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~ 357 (520)
...+ +++. ++|.+ +.|+||+|++... .+|..+... -.++++.+..-....+|+...+|++.+|...
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v-----d~~~~n~a~~m~~STSPsY~LmASLD~a~~~ 415 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY-----DEETFNEAFMMHTSTSPSYPIVASVETAAAM 415 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC-----CHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 4222 3332 47866 9999999988765 777775521 1244554433333578999999999988877
Q ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHC-C------CEEecC-------------C---------------CCCeeEEEEe
Q 010008 358 AQSPEFKVYQNKVVSNCRALASRLVEL-G------YKLVSG-------------G---------------SDNHLVLVDL 402 (520)
Q Consensus 358 ~~~~~~~~~~~~i~~na~~l~~~L~~~-G------~~v~~~-------------g---------------t~~~~~~vd~ 402 (520)
+.....+...++.++.+..+++.|.+. + +.+..+ + .|.-=+++.+
T Consensus 416 m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t 495 (713)
T PRK15399 416 LRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILT 495 (713)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEe
Confidence 654345667777888888888888663 3 344321 0 0111123333
Q ss_pred c---------CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 403 R---------PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 403 ~---------~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+ ..|+++..+.+.|+++||.+.+.. ...+= .+.+.|.++++++++.+.+.+.-+
T Consensus 496 ~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL----~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 496 PGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLL----FLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred cCcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEE----EEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3 347889999999999999997642 11222 255567889999999998877633
No 257
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.75 E-value=2.1e-16 Score=162.26 Aligned_cols=288 Identities=20% Similarity=0.217 Sum_probs=186.5
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ++++++-|.+. -+...||..|+..++.+++++||+|+..+..||+.+...- +-..-.|
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~----~~l~~~g 127 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFE----KILQKFG 127 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHH----HHHHhcC
Confidence 577888998 56778888875 3556899999999999999999999999988887643211 1111123
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
+++..++ .-|.+++++++.+.+||+|++..|+||+ ..|+++|+++|+++|+++++|.+...+ +..
T Consensus 128 --i~~~~~d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP-----~~q 194 (396)
T COG0626 128 --VEVTFVD------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATP-----VLQ 194 (396)
T ss_pred --eEEEEEC------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccc-----ccc
Confidence 3444432 1244566666663489999999999998 889999999999999999999985443 445
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCC--CCCCCCChHHHHHHHHHHHHHhcCchhH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFK 364 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~--p~~~g~p~~~~iaala~al~~~~~~~~~ 364 (520)
.|++ |+|||+.|.+|.+.|-. +|+++++++ ++.+.+..... .|..-+|.- | ...++-+. -+.
T Consensus 195 ~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~~G~~l~p~d----A-~l~lRGlk--TL~ 262 (396)
T COG0626 195 RPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRANTGAVLSPFD----A-WLLLRGLR--TLA 262 (396)
T ss_pred ChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhhcCCCCCHHH----H-HHHHhccc--hHH
Confidence 6777 79999999999998854 387777774 55555422111 122222221 1 22334332 246
Q ss_pred HHHHHHHHHHHHHHHHHHH-CCCE-EecCCC---------------CCeeEEEEecCCCCCHHHHHHHHhhcCe---EEc
Q 010008 365 VYQNKVVSNCRALASRLVE-LGYK-LVSGGS---------------DNHLVLVDLRPMGIDGARVEKILDMASI---TLN 424 (520)
Q Consensus 365 ~~~~~i~~na~~l~~~L~~-~G~~-v~~~gt---------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI---~v~ 424 (520)
.+.++..+|+..+++.|++ ..+. |..++- .+.++.+.+.. ++.+.++++...+ .++
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~----~~~~~~f~~~L~l~~~a~S 338 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN----EEAAKKFLDSLKLFKLAES 338 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC----hHHHHHHHHhCCccEEecc
Confidence 6788999999999999988 3443 443331 22344444432 2555566655444 333
Q ss_pred CCC------CCC---------CC---CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 425 KNS------VPG---------DK---SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 425 ~~~------~Pg---------~~---~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
-+. .|- +. ....++-||++.. -||.+.+.+-|++++..
T Consensus 339 lGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG--------lEd~eDLi~Dl~~Al~~ 394 (396)
T COG0626 339 LGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG--------LEDVEDLIADLEQALAK 394 (396)
T ss_pred CCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec--------CCCHHHHHHHHHHHHHh
Confidence 321 121 00 1122456898865 37777777777777653
No 258
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.75 E-value=1.5e-16 Score=167.97 Aligned_cols=159 Identities=21% Similarity=0.185 Sum_probs=120.5
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
++..+++| +++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++.+... ...+...|.
T Consensus 56 ~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G~ 122 (418)
T TIGR01326 56 NPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLGI 122 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcCc
Confidence 45566776 67889999864 366789999999999999999999999998886643211 011223344
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
+++.++. .|++++++++++ ++++|++..++||+ ..|+++|+++|+++|+++++|+++..+.. ..
T Consensus 123 --~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~~ 188 (418)
T TIGR01326 123 --EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----CR 188 (418)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----CC
Confidence 5555443 289999999987 89999999888886 78999999999999999999999865532 23
Q ss_pred CCC-cccEEEeccCcccCC--CCceEEEeeC
Q 010008 292 PFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 319 (520)
Q Consensus 292 p~~-~aDiv~~S~hK~l~G--prgG~I~~~~ 319 (520)
|+. ++|++++|+||++.| .+.|+++.++
T Consensus 189 ~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 189 PIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred chhcCCeEEEECccccccCCccceEEEEEec
Confidence 444 699999999999854 4556666654
No 259
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.74 E-value=6.9e-16 Score=158.77 Aligned_cols=334 Identities=17% Similarity=0.198 Sum_probs=218.4
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC-C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~-p 182 (520)
-+|+..++||.. |..-|+|.+.+..|| +.++++||.+. -+.+++|..++..++..+++ |
T Consensus 54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 468888888863 333477777788888 56778999986 35678999999999999998 8
Q ss_pred CCEEEEcCC----CCCccccccccccccccccccceEEEEEcc--------cC-CCCCCCCHHHHHHHhhhcCC---cEE
Q 010008 183 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR--------LD-ESTGLVDYDMLEKTAILFRP---KLI 246 (520)
Q Consensus 183 GD~Vl~~~~----~~~ghls~g~~~~~~~v~~~g~~~~~v~~~--------~d-~~~~~iD~d~le~~i~~~~p---klI 246 (520)
||++.+-.. .|..|+..+ ...+...|. .++.+. ++ +..|.+|+++|+++++++.+ -.+
T Consensus 114 g~e~g~~~~~~~v~hn~~fett----~g~a~l~G~--~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v 187 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTT----QGHSQINGC--TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI 187 (467)
T ss_pred cccccccccccccceEEEEecc----hHHHHHcCc--eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceee
Confidence 998885443 232222211 112344554 332221 11 12489999999999986322 222
Q ss_pred EEc---CCCCCCCC---CHHHHHHHHHHhCCEEEEechhhcc-c--------ccccccCC-----CCCcccEEEeccCcc
Q 010008 247 IAG---ASAYPRDF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVAD-----PFKYCDVVTTTTHKS 306 (520)
Q Consensus 247 i~~---~s~~p~~~---d~~~i~~ia~~~g~~li~D~Ah~~g-l--------i~~~~~~~-----p~~~aDiv~~S~hK~ 306 (520)
... +...+.++ ++++++++|++||+.++.|+|-.+. . .+.+..+. -+.++|.++.|++|.
T Consensus 188 ~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKg 267 (467)
T TIGR02617 188 VATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKD 267 (467)
T ss_pred eeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCC
Confidence 222 22223344 5678889999999999999986553 2 12232211 125799999999999
Q ss_pred cCCCCceEEEeeCCCcchhhHHHhhccc-----CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 307 LRGPRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 307 l~GprgG~I~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
+..|-||++.++++. +.++.++.+.. -|+. +||.....+.|+|+.|.+... .+|.++.....++|.+.|
T Consensus 268 lgApvGg~Lag~d~~--~~~l~~~~~~~~i~~EGf~t-YGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~qv~yl~~~L 341 (467)
T TIGR02617 268 AMVPMGGLLCFKDDS--FFDVYTECRTLCVVQEGFPT-YGGLEGGAMERLAVGLYDGMN---LDWLAYRINQVQYLVNGL 341 (467)
T ss_pred CCCcccceEEecchh--HHHHHHHHHhhcccccCCcC-cCchhHHHHHHHHhhhhhccc---HHHHHHHHHHHHHHHHHH
Confidence 999999999999850 00222332221 1332 577777889999999998765 456677777789999999
Q ss_pred HHCCCEEecCCCCCeeEEEEecCC-------CCCHHH-HHHHHhhcCeEE-cCCCC-----CCCCCCCC--CCEEEEccC
Q 010008 382 VELGYKLVSGGSDNHLVLVDLRPM-------GIDGAR-VEKILDMASITL-NKNSV-----PGDKSALV--PGGIRIGSP 445 (520)
Q Consensus 382 ~~~G~~v~~~gt~~~~~~vd~~~~-------g~~~~~-~~~~L~~~gI~v-~~~~~-----Pg~~~~~~--~~giRig~~ 445 (520)
.+.|++++. +..|-+++|.... ...+.. +..+-.+.||.. ..+++ |-...... -.-+|+..|
T Consensus 342 ~~~Gvpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rlaip 419 (467)
T TIGR02617 342 EEIGVVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIP 419 (467)
T ss_pred HhCCCcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccc
Confidence 999999987 4468788875421 223333 334446788863 22332 21111111 245899755
Q ss_pred CccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
+|-.|.+.|+.+++.+..+.++...+
T Consensus 420 ---Rrvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 420 ---RATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred ---cccccHhHHHHHHHHHHHHHhhhhhc
Confidence 56689999999999999999887544
No 260
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.74 E-value=2.6e-15 Score=157.40 Aligned_cols=313 Identities=16% Similarity=0.134 Sum_probs=183.7
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh----
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---- 179 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---- 179 (520)
.-.|.|.+|+...+.+.+..+ ..| ..+...+++ ++++++++.+. .+...||++|+.+++.++
T Consensus 47 h~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~ 112 (389)
T PRK01278 47 HAHPHLVEALKEQAEKLWHVS---NLY--RIPEQERLA----ERLVENSFADK-----VFFTNSGAEAVECAIKTARRYH 112 (389)
T ss_pred CCCHHHHHHHHHHHHhcCccc---ccc--CChHHHHHH----HHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHH
Confidence 346888888887775422111 111 122222333 56777765442 244678999999988765
Q ss_pred CCCCC----EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCCC----CCCHHHHHHHhhhcCCcEEEEcC
Q 010008 180 LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTG----LVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 180 l~pGD----~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~-~~d~~~~----~iD~d~le~~i~~~~pklIi~~~ 250 (520)
.++|| +|+..++.|.|..... ....+.......+ +.. .+. ..|++++++.+++ ++++|++..
T Consensus 113 ~~~G~~~r~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep 183 (389)
T PRK01278 113 YGKGHPERYRIITFEGAFHGRTLAT-------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEP 183 (389)
T ss_pred HhcCCCCCCEEEEECCCcCCCcHHH-------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEec
Confidence 56787 8999988764432111 1111110000001 111 111 2689999999987 899999986
Q ss_pred CCCCC------CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCccc-CCCCceEEEeeCC
Q 010008 251 SAYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKD 320 (520)
Q Consensus 251 s~~p~------~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l-~GprgG~I~~~~~ 320 (520)
.++++ ..++++|+++|+++|+++|+|++|. |+...+.. . ..+. ..|++ |++|.+ +|+|.|++++++
T Consensus 184 ~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~- 259 (389)
T PRK01278 184 IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE- 259 (389)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH-
Confidence 55443 2268999999999999999999964 55333311 1 0011 24654 567998 567889999987
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCE-Eec--CCCCC
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--GGSDN 395 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~-v~~--~gt~~ 395 (520)
++.+.+.........+++...+.++ ..+++.+.+++ +.+++.++.+.+.+.|++. ... ++. .+ ..
T Consensus 260 -----~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g-~G 329 (389)
T PRK01278 260 -----EAAKGMTPGTHGSTYGGNPLAMAVG-NAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRG-KG 329 (389)
T ss_pred -----HHHhccCCCCCCCCCCccHHHHHHH-HHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEec-cc
Confidence 6666665433333334433333333 34566554322 3445555566666666541 121 221 11 12
Q ss_pred eeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 396 ~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.++++.+.. +...+.+.|.+.||.+ .|+ ..+.|||+.+.. +++++++++++.|.+++.
T Consensus 330 ~~~~i~~~~---~~~~~~~~l~~~GV~~----~p~-----~~~~lR~~p~~~----~~~~~i~~~l~~l~~~l~ 387 (389)
T PRK01278 330 LLLGLKCVV---PNRDLVQALRDEGLLT----VGA-----GDNVVRLLPPLI----ITEEEIDEALERLERAAE 387 (389)
T ss_pred EEEEEEEec---CHHHHHHHHHHCCeEE----eec-----CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHH
Confidence 334444421 4566777777779998 444 246899986532 458999999999988774
No 261
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.73 E-value=1.7e-15 Score=159.20 Aligned_cols=308 Identities=13% Similarity=0.103 Sum_probs=184.8
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.. +.... +++ .++...+++ ++++++++.+. .+...||++|+.+++....
T Consensus 56 h~~p~v~~ai~~~~~~-~~~~~---~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~ 121 (396)
T PRK04073 56 HRHPKIIQALKDQADK-VTLTS---RAF-HSDQLGPWY----EKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWA 121 (396)
T ss_pred CCCHHHHHHHHHHHhh-ccccc---ccc-CCHHHHHHH----HHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHh
Confidence 3568888888777643 22111 111 122222333 56777776542 3456899999998887552
Q ss_pred ------CCC-CEEEEcCCCCCccccccccccccccccccce-----EE-----EEEcccCCCCCCCCHHHHHHHhhhcCC
Q 010008 181 ------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFRP 243 (520)
Q Consensus 181 ------~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-----~~-----~v~~~~d~~~~~iD~d~le~~i~~~~p 243 (520)
++| ++|+..+-.+.|... + .+.+.+.. +. +..++ ..|++++++.+.+ ++
T Consensus 122 ~~~~g~~~~r~~ii~~~~~~HG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~~ 187 (396)
T PRK04073 122 YDVKGVEPNKAEIIACEGNFHGRTM-A------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-NT 187 (396)
T ss_pred hhccCCCCCCCEEEEECCCcCCCCH-H------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-Ce
Confidence 145 778887654422210 1 11111110 00 01111 1278999998876 78
Q ss_pred cEEEEcCCCCCC--CCC----HHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccEEEeccCcccCC--CCc
Q 010008 244 KLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG--PRG 312 (520)
Q Consensus 244 klIi~~~s~~p~--~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDiv~~S~hK~l~G--prg 312 (520)
++|+++.+.+++ ..+ +++|+++|+++|+++|+|++|. |+...+. .. .... ..|++++ +|.+++ +|.
T Consensus 188 ~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~i 264 (396)
T PRK04073 188 AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPI 264 (396)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcc
Confidence 999998776664 333 8899999999999999999965 4432221 11 1111 3577765 598843 688
Q ss_pred eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC-
Q 010008 313 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG- 391 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~- 391 (520)
|++++++ ++.+.+.........+++.....+++ ++|+.+.+.+ +.++..++.+++.+.|++.+...+..
T Consensus 265 g~~~~~~------~i~~~~~~~~~~~t~~~~~~~~aaa~-aaL~~~~~~~---l~~~~~~~~~~l~~~L~~l~~~~i~~~ 334 (396)
T PRK04073 265 SCVAANR------DILGVFTPGSHGSTFGGNPLACAVSI-AALEVLEEEK---LPERSLELGEYFKEQLKEIDNPMIKEV 334 (396)
T ss_pred eEEEEcH------HHHhhhcCCCCCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHHHHHHHHHHHHHHHhhcCCcccce
Confidence 9999988 67776654333233444444444444 4676554333 34556667888888888754322221
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.....++.+++.. +...+.+.|.+.||.+.. . .++.|||+.+.. .+++|++++++.|++++
T Consensus 335 ~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~----~-----~~~~iRi~p~l~----~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 335 RGRGLFIGVELNE---PARPYCEALKEEGLLCKE----T-----HETVIRFAPPLV----ITKEELDWAFEKIKAVL 395 (396)
T ss_pred ecceEEEEEEecc---hHHHHHHHHHHCCeEEec----C-----CCCEEEEECCcc----cCHHHHHHHHHHHHHHh
Confidence 0123445566532 356677778889999842 1 246899987644 45899999999998765
No 262
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.73 E-value=3.9e-16 Score=149.56 Aligned_cols=311 Identities=19% Similarity=0.213 Sum_probs=206.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC-CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 183 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all-~pG 183 (520)
+..+.+++|.... .|..-|+-.+....|| ++.+++||-+.. +.++||+.+|+++++.-+ +||
T Consensus 34 PTdeMr~am~eA~--------vgDdVyGeD~tt~rLE----~~vA~l~GKEAg-----LFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEAS--------VGDDVYGEDPTTNRLE----QRVAELFGKEAG-----LFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcc--------cCcccccCCccHHHHH----HHHHHHhCccce-----eeecccccccHHHHHHHhcCCC
Confidence 3566777776542 2334456556667788 678899999874 445899999998888764 599
Q ss_pred CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-------CcEEEEcCCCC--C
Q 010008 184 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PKLIIAGASAY--P 254 (520)
Q Consensus 184 D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~-------pklIi~~~s~~--p 254 (520)
.+|++-+..|- |-|-.. ....+.|. .+.++.. ++++.+|+++||..+...+ +|+|++....+ +
T Consensus 97 ~eii~gd~~HI----~~~E~g-g~s~l~gv--~~~tv~~-e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 97 SEIIVGDRAHI----HRYEQG-GISQLAGV--HVRTVKN-ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred ceEEeccchhe----eehhcc-Chhhhccc--eeEeeee-CCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 99998776542 111110 11233444 3334332 3568999999999997433 58998875543 4
Q ss_pred C-CCCH---HHHHHHHHHhCCEEEEechhhcccc-cccccCCC-CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHH
Q 010008 255 R-DFDY---PRMRQIADAVGALLMMDMAHISGLV-AASVVADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 255 ~-~~d~---~~i~~ia~~~g~~li~D~Ah~~gli-~~~~~~~p-~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~ 328 (520)
+ ..|+ +++.++|+++|+.|+.|+|...... +.++...- ...+|-|...++|.|..|-|.+|++++ ++.
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k------~FI 242 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSK------DFI 242 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccH------HHH
Confidence 3 5555 4677889999999999998654322 22221110 125788888999999999999999999 676
Q ss_pred Hhh---cccCCCCCCCCChHH-HHHHHH-HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC-CEEecCCCCCeeEEEEe
Q 010008 329 SAI---NNAVFPGLQGGPHNH-TIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLVDL 402 (520)
Q Consensus 329 ~~i---~~~~~p~~~g~p~~~-~iaala-~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G-~~v~~~gt~~~~~~vd~ 402 (520)
++. +++.- ||.--. .+||.+ ++|. ..+. ..++..+.++.|++.++..+ +++-.+..+++++.+.+
T Consensus 243 ~kA~~~RKalG----GGmRQsGvLaaaaLval~----~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l 313 (384)
T KOG1368|consen 243 DKARHFRKALG----GGMRQSGVLAAAALVALD----ENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVL 313 (384)
T ss_pred HHHHHHHHHhc----CchhHHHHHHHHHHHHhh----cchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeec
Confidence 543 34322 221111 222221 2333 2333 45666778899999998865 88766655677777666
Q ss_pred cCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 403 RPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 403 ~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
...+++.+++.+.|++.||.+ ++|+ ...+||.++. ..+.++++.+...+.+.+
T Consensus 314 ~q~~~~~~~l~~~~~k~gi~l----m~~~-----s~r~Rivlh~----Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 314 CQARLTAEELCKFLEKNGILL----MGGA-----SRRIRIVLHH----QVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred ccccCCHHHHHHHHHHCCeEE----eecc-----ccceEEEEEE----ecCHHHHHHHHHHHHHHH
Confidence 666789999999999999998 4443 3469998763 456899999988885443
No 263
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.73 E-value=1.6e-15 Score=150.25 Aligned_cols=334 Identities=17% Similarity=0.199 Sum_probs=223.7
Q ss_pred ceEecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHH
Q 010008 96 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 170 (520)
Q Consensus 96 i~Liasen~~----~~~V~ea~~s~l~~~y~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~ 170 (520)
+...-|..|. .|.|++||...+. +|..|--|.|--.| +.+.-.+| ..++++.+-+.+ +..+|.--
T Consensus 173 VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA-----LlFsSCfV 242 (570)
T KOG1360|consen 173 VTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA-----LLFSSCFV 242 (570)
T ss_pred eEEEecCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce-----eeeeeeee
Confidence 4444455553 5999999998874 55556666664444 44445666 457788877753 33466668
Q ss_pred HHHHHHHhh--CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc---CCcE
Q 010008 171 ANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKL 245 (520)
Q Consensus 171 A~~~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~---~pkl 245 (520)
||...+..| .-||.+|..-...|.+.+. .+.-++.. +.++ ..-|+++|++++... .||+
T Consensus 243 ANDstLftLak~lpgcei~SD~gNHASMI~--------GIrns~v~-K~IF-------rHND~~hL~~lL~~~~~svPKi 306 (570)
T KOG1360|consen 243 ANDSTLFTLAKKLPGCEIFSDEGNHASMIQ--------GIRNSRVP-KHIF-------RHNDLDHLEQLLQSSPKSVPKI 306 (570)
T ss_pred ccchHHHHHHHHCCCcEEeccccchHHHHH--------HhhhcCCc-ceee-------ccCCHHHHHHHHHhCCCCCCce
Confidence 888888877 3488888866554433221 11112210 1111 134888888888653 5788
Q ss_pred EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc---cc--cCCCCCcccEEEeccCcccCCCCceEEEee
Q 010008 246 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFK 318 (520)
Q Consensus 246 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~--~~~p~~~aDiv~~S~hK~l~GprgG~I~~~ 318 (520)
|.+. +|..+.+.|+++|+++|+++|++..+|+.|..|+... |+ .+..+...||+++|+-|.| |--||+|...
T Consensus 307 vAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIAat 385 (570)
T KOG1360|consen 307 VAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIAAT 385 (570)
T ss_pred EEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceehhh
Confidence 8876 4455559999999999999999999999999998642 22 2222335899999999997 5678999988
Q ss_pred CCCcchhhHHHhhcccCCCCC--CCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCe
Q 010008 319 KDPVLGVELESAINNAVFPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 396 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~~~p~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~ 396 (520)
. ++.+.+++..-.++ ..-|.+ .+++.-.|.+.+...+....+++.++|.+++.+.|.+.|++++.. ++|
T Consensus 386 ~------~LvDmiRSyAaGFIFTTSLPP~-vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~~--pSH 456 (570)
T KOG1360|consen 386 R------KLVDMIRSYAAGFIFTTSLPPM-VLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIPN--PSH 456 (570)
T ss_pred h------hHHHHHHHhcCceEEecCCChH-HHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccCC--Ccc
Confidence 7 78888876532222 233333 344433466666666667778888999999999999999999874 578
Q ss_pred eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 397 ~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
++-+.+....+..+....++.+.||.|...-+|- -+.++..+||... -+.+++-|+.+.+.+..+++..
T Consensus 457 IiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPT--V~rG~E~LRiaPT----P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 457 IIPVRVGDAALAKQASDILISKHNIYVQAINYPT--VARGTERLRIAPT----PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred eeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCc--ccccceeeecCCC----CCCCHHHHHHHHHHHHHHHHHc
Confidence 8766665433333444556788999986533442 2345667999432 3456888999999999988753
No 264
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=5.9e-15 Score=155.16 Aligned_cols=317 Identities=19% Similarity=0.145 Sum_probs=188.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhhCCCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILKPH 183 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs~A~~~~l~all~pG 183 (520)
.+|.|.+++...+... . ....+| .. ....++ .++++++++.+ ++. .+...||++|+.+++..+..+|
T Consensus 60 ~~p~v~~ai~~~~~~~-~--~~~~~~-~~-~~~~~l----a~~l~~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~g 127 (398)
T PRK03244 60 AHPAVVEAVTRQLATL-G--HVSNLF-AT-EPQIAL----AERLVELLGAPEGGR---VFFCNSGAEANEAAFKLARLTG 127 (398)
T ss_pred CCHHHHHHHHHHHHhc-c--CccCcc-CC-HHHHHH----HHHHHHhCCCCCCCE---EEEeCchHHHHHHHHHHHHHHC
Confidence 3688888888777542 1 111122 21 112223 36788888854 232 2334677799999998776677
Q ss_pred -CEEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 010008 184 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYPR--D 256 (520)
Q Consensus 184 -D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~-~~d~~~---~~iD~d~le~~i~~~~pklIi~~~s~~p~--~ 256 (520)
++|+..+..|.|+... .....|.......+ ++..+. -..|++++++.+.+ ++++|++..+.+++ .
T Consensus 128 ~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~ 199 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMG-------ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVV 199 (398)
T ss_pred CCeEEEECCCcCCccHH-------HHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCc
Confidence 5677776655333110 01111110000000 000000 01388999998865 78999998766664 4
Q ss_pred CC----HHHHHHHHHHhCCEEEEechhhccccccccc-CCCC-C-cccEEEeccCcccC-CCCceEEEeeCCCcchhhHH
Q 010008 257 FD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPF-K-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 257 ~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~-~-~aDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~l~ 328 (520)
.+ +++|+++|+++|+++|+|++|. |+-..+.. .... . ..|++++ +|+|. |.|.|+++.++ ++.
T Consensus 200 ~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~------~~~ 270 (398)
T PRK03244 200 PPPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFG------PAA 270 (398)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcH------HHH
Confidence 44 8899999999999999999974 54322211 0011 1 3577655 69984 56789999987 666
Q ss_pred HhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec--CCCCCeeEEEEecCCC
Q 010008 329 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS--GGSDNHLVLVDLRPMG 406 (520)
Q Consensus 329 ~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~--~gt~~~~~~vd~~~~g 406 (520)
+.+.........+++... .++...+|+.+... ++.+++.+..++|.+.|++.+++++. .+ ...++++.+...
T Consensus 271 ~~~~~~~~~~t~~~~~~~-~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~~~i~~~~~- 344 (398)
T PRK03244 271 DLLTPGLHGSTFGGNPVA-CAAALAVLDTIASE---GLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLLLGIVLTAP- 344 (398)
T ss_pred hhccCCCCcCCCCCCHHH-HHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEEEEEEEecc-
Confidence 666543222333443333 33333456654433 34566777788899999886553322 12 234566666421
Q ss_pred CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 407 IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 407 ~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
....+.+.|.+.||.+... .+..||++.+.. .+++|++++.+.+++++..
T Consensus 345 -~~~~~~~~l~~~Gv~~~~~---------~~~~iR~~p~~~----~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 345 -VAKAVEAAAREAGFLVNAV---------APDVIRLAPPLI----ITDAQVDAFVAALPAILDA 394 (398)
T ss_pred -HHHHHHHHHHHCCeEEeec---------CCCEEEEECCCc----CCHHHHHHHHHHHHHHHHh
Confidence 3456778888899998531 246899997753 3489999999999998864
No 265
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.72 E-value=4.3e-15 Score=156.74 Aligned_cols=325 Identities=18% Similarity=0.131 Sum_probs=188.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 182 (520)
.+|.|.+++...+... . .++.. ++..+... ...++++++++.+.++ .+..+||++|+.+++..+ ..+
T Consensus 53 ~~p~v~~a~~~~~~~~-~-~~~~~--~~~~~~~~----~l~~~l~~~~~~~~~~---v~~~~sgsea~~~al~~~~~~~~ 121 (413)
T cd00610 53 NHPEVVEALKEQLAKL-T-HFSLG--FFYNEPAV----ELAELLLALTPEGLDK---VFFVNSGTEAVEAALKLARAYTG 121 (413)
T ss_pred CCHHHHHHHHHHHHhC-c-CccCc--ccCCHHHH----HHHHHHHHhCCCCCCE---EEEcCcHHHHHHHHHHHHHHHcC
Confidence 5788999988877421 1 11110 01122223 3447888999965543 244578889999998876 467
Q ss_pred CCEEEEcCCCCCccccccccccccc-c--ccccceEEEEEcccCC-----CCCCCCHHHHHHHhhhc--CCcEEEEcCCC
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRR-V--SGTSIYFESMPYRLDE-----STGLVDYDMLEKTAILF--RPKLIIAGASA 252 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~-v--~~~g~~~~~v~~~~d~-----~~~~iD~d~le~~i~~~--~pklIi~~~s~ 252 (520)
+|+|++.++.+.|....+....... . ........++.++.+. +....|++++++.++.+ ++++|++....
T Consensus 122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~ 201 (413)
T cd00610 122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQ 201 (413)
T ss_pred CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcccc
Confidence 9999999987655321111000000 0 0000001223333321 11344889999988762 46677776444
Q ss_pred CC-C-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccC-CCCceEEEeeCCCc
Q 010008 253 YP-R-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 322 (520)
Q Consensus 253 ~p-~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~-GprgG~I~~~~~~~ 322 (520)
++ + ..+ +++|+++|+++|+++|+|++|. |+...+.. . .... ..|++ |++|++. |.|.|++++++
T Consensus 202 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~--- 275 (413)
T cd00610 202 GEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGRE--- 275 (413)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcH---
Confidence 43 2 455 8999999999999999999975 43222210 0 0011 34665 4559985 46779998877
Q ss_pred chhhHHHhh--cccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCC--EEec--CCCCCe
Q 010008 323 LGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVS--GGSDNH 396 (520)
Q Consensus 323 ~~~~l~~~i--~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~--~v~~--~gt~~~ 396 (520)
++.+.+ ....+.+..+++.. .+++...+++.+..+ +..+++.++.+++.+.|++.+. .++. .+ ...
T Consensus 276 ---~~~~~~~~~~~~~~~t~~~~~~-~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~g~ 347 (413)
T cd00610 276 ---EIMDAFPAGPGLHGGTFGGNPL-ACAAALAVLEVLEEE---GLLENAAELGEYLRERLRELAEKHPLVGDVRG-RGL 347 (413)
T ss_pred ---HHHHhhccCCCCCCCCCCcCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeec-Cce
Confidence 666664 22222223333333 334444466665432 3456777778888888776321 2221 12 235
Q ss_pred eEEEEecCCC-------CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPMG-------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 397 ~~~vd~~~~g-------~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
++++.+.... .+...+.+.|.+.||.+. |+. +..+|++.+.. ++++|++++.+.|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~----~~~-----~~~lR~~~~~~----~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 348 MIGIELVKDRATKPPDKELAAKIIKAALERGLLLR----PSG-----GNVIRLLPPLI----ITEEEIDEGLDALDEA 412 (413)
T ss_pred EEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEe----ecC-----CCEEEEECCCc----CCHHHHHHHHHHHHHh
Confidence 5566554321 234567788888999994 321 46799986643 4589999999998765
No 266
>PLN02590 probable tyrosine decarboxylase
Probab=99.71 E-value=3.6e-15 Score=160.37 Aligned_cols=313 Identities=16% Similarity=0.104 Sum_probs=192.6
Q ss_pred chhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhCC--------C--CCEEE-EcCCCCCcccc
Q 010008 134 NEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P--HDRIM-GLDLPHGGHLS 198 (520)
Q Consensus 134 ~~~~d~lE~~a~~~~~~lfg~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p--GD~Vl-~~~~~~~ghls 198 (520)
.+...++|..+.+|+++++|.+...+ ..-+..++||+||+.++.+.-+ . .+-|+ +.+- .|++
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~S 241 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSS 241 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHH
Confidence 34567899999999999999986411 1123346677999877665311 1 12233 2332 2322
Q ss_pred ccccccccccccccceE-EEEEcccCC-CCCCCCHHHHHHHhhhc-----CCcEEEEc--CCCCCCCCCHHHHHHHHHHh
Q 010008 199 HGFMTPKRRVSGTSIYF-ESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIAG--ASAYPRDFDYPRMRQIADAV 269 (520)
Q Consensus 199 ~g~~~~~~~v~~~g~~~-~~v~~~~d~-~~~~iD~d~le~~i~~~-----~pklIi~~--~s~~p~~~d~~~i~~ia~~~ 269 (520)
. .|.+.+.|.+. +++.+++|. +++.+|+++|++++.+. .|-+|+.. .++.+...|+++|+++|+++
T Consensus 242 v-----~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~ 316 (539)
T PLN02590 242 F-----RKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY 316 (539)
T ss_pred H-----HHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh
Confidence 1 24556666542 244555664 35799999999998652 35566655 33344488999999999999
Q ss_pred CCEEEEechhhcccccccccC---CCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHH-------hhccc----
Q 010008 270 GALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-------AINNA---- 334 (520)
Q Consensus 270 g~~li~D~Ah~~gli~~~~~~---~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~-------~i~~~---- 334 (520)
|+||+||+|+.........+. ..++.+|-++.++|||+..|-+ |++++++.. .+.+ .+...
T Consensus 317 g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~----~l~~a~~~~~~YL~~~~~~~ 392 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY----SLIDALKTNPEYLEFKVSKK 392 (539)
T ss_pred CCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH----HHHHHhhcCHHHhCCccccc
Confidence 999999998543332222211 2345789999999999988877 888888741 1111 11110
Q ss_pred --C--C--CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEecCCCC
Q 010008 335 --V--F--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGI 407 (520)
Q Consensus 335 --~--~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~~~g~ 407 (520)
. + ...+.+-.. ....++.+|+.....+|.++.++..+.++++.+.|.+ .+|+++.+.. -.++.+.+.+.+.
T Consensus 393 ~~~~d~~d~~i~lsRr~-raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-l~iVcFr~~~~~~ 470 (539)
T PLN02590 393 DTVVNYKDWQISLSRRF-RSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-FSLVCFRLAPVDG 470 (539)
T ss_pred ccCCCccccCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-eEEEEEEecCCCC
Confidence 0 0 012333332 2345566787777778999999999999999999977 5799987532 2333333433222
Q ss_pred CH-------HHHHHHHhhcCeE-EcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 408 DG-------ARVEKILDMASIT-LNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 408 ~~-------~~~~~~L~~~gI~-v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+. ..+.+.|.+.|.. +....+. +...||+++... -.+++|++++.+.|.+...
T Consensus 471 ~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~------g~~~lR~~i~n~---~T~~~dv~~~~~~i~~~a~ 531 (539)
T PLN02590 471 DEDQCNERNRELLAAVNSTGKIFISHTALS------GKFVLRFAVGAP---LTEEKHVTEAWQIIQKHAS 531 (539)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEeeEEC------CEEEEEEEecCC---CCCHHHHHHHHHHHHHHHH
Confidence 21 2344555555544 3322111 234799875322 2458999999999987643
No 267
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.71 E-value=3.5e-15 Score=141.32 Aligned_cols=323 Identities=17% Similarity=0.190 Sum_probs=205.9
Q ss_pred ccceEec--CCCCChHHHHHHHhhhhhccCCCCCCCCCCCC-c------chhHHHHHHHHHHHHHHHcCCCCCCCceeee
Q 010008 94 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNVQ 164 (520)
Q Consensus 94 ~~i~Lia--sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~-g------~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~ 164 (520)
..||+.+ --...+++.++|+-.. .+||.--+|.. | ++.+..+- +.+++++|.|. |.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E~-----gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLEW-----GDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHHh-----cCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------ee
Confidence 5677765 3356789999988643 44554444431 1 12222222 34788999984 56
Q ss_pred cCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhc-
Q 010008 165 PLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF- 241 (520)
Q Consensus 165 ~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~le~~i~~~- 241 (520)
+|.|+ +|-++++.+++++||.|++-.+. |+|... +....|. ++..+|-. ...+.|++|...+.+.+.
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~a---HYttyv-----AAEragl--~v~eVp~tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLA---HYTTYV-----AAERAGL--NVAEVPNTGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcc---hHHHHH-----HHHhcCC--eEEecCCCCCCceEecHHHHHHHHHHHH
Confidence 69999 99999999999999999987764 444322 2233454 55444421 123677877766655432
Q ss_pred -----CCcEEEEcCC--CCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCC-CCce
Q 010008 242 -----RPKLIIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG-PRGG 313 (520)
Q Consensus 242 -----~pklIi~~~s--~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~G-prgG 313 (520)
.|.+.++.++ +|+...|.+++++||+++|++++...|+..|-....... .++|+++.|.||+++. ...|
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke---~g~DFiVgSGHKsmAAs~PiG 227 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKE---IGADFIVGSGHKSMAASAPIG 227 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccc---cCCCEEEecCccchhccCCee
Confidence 3677777754 566688999999999999999999999877755322111 1799999999999843 3458
Q ss_pred EEEeeCCCcchhhHHHhhccc---CCCC---------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 314 MIFFKKDPVLGVELESAINNA---VFPG---------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~---~~p~---------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
++..+. ++.+.+-+. .|+- ..|.|.+..+|++-.-.+.+ ...++-+++++.+.++|
T Consensus 228 vl~~~e------E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV------krWdeEv~kaR~fv~el 295 (382)
T COG1103 228 VLAMSE------EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV------KRWDEEVEKARWFVAEL 295 (382)
T ss_pred EEeehh------HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 887777 555543211 1221 24666666666554333332 22344566788999999
Q ss_pred HHCC-CEEecCCCCCeeEEEEecCCC---------CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccC
Q 010008 382 VELG-YKLVSGGSDNHLVLVDLRPMG---------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 451 (520)
Q Consensus 382 ~~~G-~~v~~~gt~~~~~~vd~~~~g---------~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g 451 (520)
.+.| +........+|- ++.+.... -.+..+.+-|.+.||.-- -|| .+.++.+++ .|
T Consensus 296 Ekigg~~qlG~rPk~Hd-Lm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI---~~G-----~Tk~~K~sv-----yG 361 (382)
T COG1103 296 EKIGGVKQLGERPKNHD-LMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGI---QPG-----QTKYFKLSV-----YG 361 (382)
T ss_pred HHhhhHHHhCCCCcccc-eeeecCchHHHHHHhCcCCceeeHHHHHhcCcccc---ccC-----ceeEEEEEe-----ec
Confidence 8854 766543233452 22222111 123457778888888642 233 356777765 57
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 010008 452 FSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 452 ~~~~d~~~la~~i~~~l~~ 470 (520)
++.+++++++++++++++.
T Consensus 362 l~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 362 LSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8899999999999998864
No 268
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.71 E-value=4.9e-15 Score=143.87 Aligned_cols=340 Identities=17% Similarity=0.172 Sum_probs=224.3
Q ss_pred ccceEecCC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 010008 94 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 172 (520)
Q Consensus 94 ~~i~Liase-n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~ 172 (520)
..|.|..+. .-.|+.+...........|.++...+...+-..|.+.-|. .-++++.+.|+.+.+ |.++.+++.|
T Consensus 31 ~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~-lgdklApLiGA~~~E----vvv~dtts~n 105 (407)
T COG3844 31 GVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPER-LGDKLAPLIGARAGE----VVVTDTTSIN 105 (407)
T ss_pred CeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhH-HHHHhhhhhcCCCCc----eEEeCCcchH
Confidence 557776433 3466677776666666666665544333233445554443 447899999999864 4446666655
Q ss_pred H-HHHHhh--CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 173 F-EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 173 ~-~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
. .++.+. ..+|++|++++-. ...| .++.+..-+.+.+.. |++ .+.++++++++++++ .+.+|+++
T Consensus 106 l~k~L~aalr~~~~r~vIv~E~~--~fpT-dly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~ 173 (407)
T COG3844 106 LFKVLAAALRPQEGRRVIVSEGD--NFPT-DLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLS 173 (407)
T ss_pred HHHHHHHHhccCCCceEEeecCC--CCCc-chhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEec
Confidence 4 355544 4569999987632 1222 222222222233321 222 256788899999988 88888888
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccC-CCCc-eEEEeeCCCc---
Q 010008 250 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR-GPRG-GMIFFKKDPV--- 322 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~-Gprg-G~I~~~~~~~--- 322 (520)
..+|-+ ..|+.+|.++|+++|++++.|-||++|.+..+++.. ++|+.+.++||.|. ||.+ ++++..+...
T Consensus 174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~---gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~ 250 (407)
T COG3844 174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAA---GADFAIGCSYKYLNGGPGAPAGLFVAPRHRERS 250 (407)
T ss_pred cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeeccc---CCCeeeeeeceeccCCCCCceeEEecccccccc
Confidence 777754 789999999999999999999999999987766655 69999999999995 4544 7777766410
Q ss_pred ------ch-----hhHHHhhc--ccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CC
Q 010008 323 ------LG-----VELESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG 385 (520)
Q Consensus 323 ------~~-----~~l~~~i~--~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G 385 (520)
.+ +.+.+... .....+.+|++.+..++++..+|+.....+..+.+++-+....++.+-++. .+
T Consensus 251 ~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~ 330 (407)
T COG3844 251 WPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYG 330 (407)
T ss_pred ccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCC
Confidence 00 11111111 111223478888888888888888766666677778888888887776665 26
Q ss_pred CEEecCC----CCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 386 YKLVSGG----SDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 386 ~~v~~~g----t~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
+.+.++- ..+|.. +... .+..+.+.|.++||..... .|+-||+|...+.. +-.|+=..+
T Consensus 331 l~l~tPr~~~~rGsqvS---~~hp--~~~~V~qaLi~rGVigD~R---------~P~vlRfgftPlY~---~~~DVw~AV 393 (407)
T COG3844 331 LTLVTPRAHEERGSQVS---LYHP--HGYQVMQALIDRGVIGDFR---------EPDVLRFGFTPLYV---SFVDVWDAV 393 (407)
T ss_pred cEEeccchhhhccceee---EecC--cHHHHHHHHHHcCcccccc---------CCCeeeecCcccee---chhHHHHHH
Confidence 7777752 123432 2222 5788999999999987542 47889998754442 357888888
Q ss_pred HHHHHHHHH
Q 010008 462 DFIHEGVEI 470 (520)
Q Consensus 462 ~~i~~~l~~ 470 (520)
+.+.+++..
T Consensus 394 ~~L~evL~t 402 (407)
T COG3844 394 DALEEVLDT 402 (407)
T ss_pred HHHHHHHHh
Confidence 888887764
No 269
>PLN02263 serine decarboxylase
Probab=99.71 E-value=2e-15 Score=158.62 Aligned_cols=289 Identities=14% Similarity=0.085 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-CCceeeecCChHHHHHHHHHhhCC--CCCEEEEcCCCCCccccccccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 213 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~-~~~~~V~~~sGs~A~~~~l~all~--pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~ 213 (520)
..++|..+.+|++++||.+++ .|+ +..++||++|+.++.+.-+ +...|++++-. |++. .|...+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~a---H~Sv-----~KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRES---HYSV-----FKAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCc---cHHH-----HHHHHhcCC
Confidence 568999999999999999863 454 3346667999988776522 33455555543 3222 245666776
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcC--CcEEEEcCCC--CCCCCCHHHHHHHHHHhCC-----EEEEechhhcccc
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGASA--YPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 284 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~--pklIi~~~s~--~p~~~d~~~i~~ia~~~g~-----~li~D~Ah~~gli 284 (520)
+.+.++++ +++.+|+++|++++.+.+ |-+|+++..+ .+...|+++|.++|+++|+ ||++|+|. .|.+
T Consensus 201 --~~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~-GG~~ 276 (470)
T PLN02263 201 --ECVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL-FGLM 276 (470)
T ss_pred --cceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc-hhhH
Confidence 45566666 578999999999887633 5555555333 3348899999999999997 99999984 4543
Q ss_pred ccc-ccCCCCC---cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcc------cCCCCCCCCChHHHHHHHHH
Q 010008 285 AAS-VVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN------AVFPGLQGGPHNHTIGGLAV 353 (520)
Q Consensus 285 ~~~-~~~~p~~---~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~------~~~p~~~g~p~~~~iaala~ 353 (520)
..- ....++. .+|-++.++|||+..|-+ |++++++. ..+.+.. ...+..+|+-+....+.++.
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 211 1111233 489999999999988887 99999873 2221111 01234456655555566777
Q ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCC
Q 010008 354 CLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKS 433 (520)
Q Consensus 354 al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~ 433 (520)
.|+.....+|.+..++..++++++.+.|++.|+.++... ... .+.++.. + +. ....|..++.
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p-~s~--~V~f~~p--~-~~----~~~~gW~L~~-------- 412 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNE-LSS--TVVFERP--K-DE----EFVRRWQLAC-------- 412 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCC-Cce--EEEEecC--c-hH----HhhcceEEcc--------
Confidence 888777778899999999999999999999898876532 222 2333321 1 11 1134555532
Q ss_pred CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 434 ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 434 ~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+..++|.+.. ..+.+.++++.+-+.+...
T Consensus 413 --~~~~~Hivvmp----hv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 413 --QGNIAHVVVMP----SVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred --CCCcEEEEEcC----CCCHHHHHHHHHHHHHHHh
Confidence 12347775432 1335667776666655543
No 270
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=6.2e-15 Score=153.85 Aligned_cols=314 Identities=17% Similarity=0.139 Sum_probs=185.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
..+|.|.+++...+.+.+. ....++ . +++....+++.+.++.+. .+...||++|+.+++... ..+
T Consensus 45 ~~~p~v~~a~~~~~~~~~~---~~~~~~--~----~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~ 110 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWH---VSNLFT--N----SLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHT 110 (377)
T ss_pred CCCHHHHHHHHHHHHhccc---cccccC--C----HHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhc
Confidence 3578888888887764321 111111 1 333334466666665432 244689999999988843 334
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC-C--CCCHHHHHHHhhhcCCcEEEEcCCCCCC--
Q 010008 183 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTAILFRPKLIIAGASAYPR-- 255 (520)
Q Consensus 183 G-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~-~--~iD~d~le~~i~~~~pklIi~~~s~~p~-- 255 (520)
| ++|+..+..+.|....+ +...+.. +..-..++.++. . ..|++++++.+.+ ++++|++....+++
T Consensus 111 g~~~vi~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~ 182 (377)
T PRK02936 111 GKSKIVTFEQSFHGRTFGT-------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGV 182 (377)
T ss_pred CCCeEEEECCCcCCCcHHh-------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCC
Confidence 5 67888877653321111 1111110 000000111110 0 1278999998876 78888887443322
Q ss_pred ----CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC-cccEEEeccCccc-CCCCceEEEeeCCCcchhhH
Q 010008 256 ----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVEL 327 (520)
Q Consensus 256 ----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~-~aDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~l 327 (520)
...+++|+++|+++|+++|+|++| .|+...+.... .+. ..|++ +++|++ .|+|+|++++++ ++
T Consensus 183 ~~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~ 253 (377)
T PRK02936 183 IPADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------EL 253 (377)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HH
Confidence 234899999999999999999997 46543332100 011 24665 578998 567889999987 67
Q ss_pred HHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecC-CCCCeeEEEEecC
Q 010008 328 ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNHLVLVDLRP 404 (520)
Q Consensus 328 ~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~-gt~~~~~~vd~~~ 404 (520)
.+.+.........+++... .++...+++.... .++.+++.++.+.+.+.|.+. ++..+.. .....++++++..
T Consensus 254 ~~~~~~~~~~~t~~~~~~~-~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 329 (377)
T PRK02936 254 GTAFGPGSHGSTFGGNPLA-MAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329 (377)
T ss_pred HhhccCCCCCCCCCCCHHH-HHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc
Confidence 7766543322333443343 4444446765532 244567777788888888762 3433221 0123566777653
Q ss_pred CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 405 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 405 ~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
+...+.+.|.+.||.+. |+ ..+.||++.+.. .++++++++++.|.+++
T Consensus 330 ---~~~~~~~~l~~~gv~v~----~~-----g~~~lRi~p~~~----~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 330 ---EVAPVIEQLREEGLLVL----SA-----GPNVIRLLPPLV----VTKEELDQAVYLLKKVL 377 (377)
T ss_pred ---hHHHHHHHHHHCCeEEe----cC-----CCCEEEEECCcc----cCHHHHHHHHHHHHHhC
Confidence 25667788899999983 32 246899986543 45899999999987753
No 271
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.70 E-value=3.2e-15 Score=149.05 Aligned_cols=281 Identities=18% Similarity=0.217 Sum_probs=183.6
Q ss_pred eeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccc-cccceEEEEEcccCCC-CCCCCHHHHHHHh
Q 010008 162 NVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTA 238 (520)
Q Consensus 162 ~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~-~~g~~~~~v~~~~d~~-~~~iD~d~le~~i 238 (520)
+|.++.|+ .||.++...|.+|||.-|++.|.|+|.-.+ +. ..| ++++++.++.. ++.|+.+++|++.
T Consensus 148 ~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrd--------l~~rTg--veivpv~c~Ss~~f~itv~alE~A~ 217 (471)
T KOG0256|consen 148 RVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRD--------LRWRTG--VEIVPVHCSSSNGFQITVEALEAAL 217 (471)
T ss_pred ceEEecccchhhHHHHHHhcCCCceeeecCCCCCccccc--------ceeccC--ceEEEEEeecCCCccccHHHHHHHH
Confidence 44456666 899999999999999999999988875221 22 234 47777777654 4799999998876
Q ss_pred hh-----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhccccccccc-CCCCC-------ccc--E
Q 010008 239 IL-----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-------YCD--V 298 (520)
Q Consensus 239 ~~-----~~pklIi~~~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~~-------~aD--i 298 (520)
.+ .+.|.|++..|+||- ..+ +..+..+|.++|+.||+|+. |+|-++.... .+.++ ..| -
T Consensus 218 ~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI-ya~sVF~~~~F~Sv~ev~~~~~~~~~rvH 296 (471)
T KOG0256|consen 218 NQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI-YAGSVFDKSEFRSVLEVRKDPHLDPDRVH 296 (471)
T ss_pred HHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehh-hcccccCccCceEHHHHhhccccCCCcEE
Confidence 53 256888888888884 444 55667778899999999998 6676665421 11111 122 4
Q ss_pred EEeccCccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 010008 299 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 376 (520)
Q Consensus 299 v~~S~hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~ 376 (520)
++.|++|-| +|.|-|.|+..++ ++.....+...-+...+..-+.++++- +=++..+....+..+++..+-++
T Consensus 297 ivyslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~ 370 (471)
T KOG0256|consen 297 IVYSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRY 370 (471)
T ss_pred EEEEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH
Confidence 678899964 7888899999886 665554443222222222222333221 11222221225666777788888
Q ss_pred HHHHHHHCCCEEecCCCCCeeEEEEecCC----CCCHH-H-HHHHHhhcCeEEcCCCCCCCC-CCCCCCEEEEccCCccc
Q 010008 377 LASRLVELGYKLVSGGSDNHLVLVDLRPM----GIDGA-R-VEKILDMASITLNKNSVPGDK-SALVPGGIRIGSPAMTT 449 (520)
Q Consensus 377 l~~~L~~~G~~v~~~gt~~~~~~vd~~~~----g~~~~-~-~~~~L~~~gI~v~~~~~Pg~~-~~~~~~giRig~~~~tt 449 (520)
+.+.|++.|+++...+ ...++|+|++.. ...++ + ..+.+++.++.+ -||.. -...+|++|++...
T Consensus 371 ~~~gLk~lgI~cl~s~-AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnl----SpG~s~~C~EpGWFRvcFAn--- 442 (471)
T KOG0256|consen 371 IVEGLKALGIPCLKSN-AGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNL----SPGSSCHCHEPGWFRVCFAN--- 442 (471)
T ss_pred HHhhHHhcCCceeecC-CeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhcccc----CCCCcceecCCCeEEEEecc---
Confidence 9999999999998753 346778998642 11222 1 345566668877 45654 34568999998764
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 010008 450 RGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 450 ~g~~~~d~~~la~~i~~~l~ 469 (520)
+.++.++-..+.|+..+.
T Consensus 443 --~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 443 --MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred --CCHHHHHHHHHHHHHHHH
Confidence 445666667777766665
No 272
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=1.3e-14 Score=152.37 Aligned_cols=310 Identities=16% Similarity=0.155 Sum_probs=180.6
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCC--
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 183 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pG-- 183 (520)
.|.|.+++...+... ... ...|. .+...+ ..+++++++|.+. .+...+|++|+.+++.++..++
T Consensus 57 ~p~v~~a~~~~~~~~-~~~--~~~~~--~~~~~~----la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKL-IHT--SNLYY--IEPQEE----LAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhc-ccc--ccccC--CHHHHH----HHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 478888888776532 111 11121 222233 3367778777642 2345677799999998765444
Q ss_pred -----CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCCC----CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 010008 184 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY 253 (520)
Q Consensus 184 -----D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~~----~iD~d~le~~i~~~~pklIi~~~s~~ 253 (520)
++|++.++.+.|.. .. .+...+.. +.....++. .+. ..|++++++++.+ ++++|++..+++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~-----~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRT-----LA--TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcCccc-----HH--HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEecccC
Confidence 67888887653321 10 11111110 000011111 111 2289999999976 899999976554
Q ss_pred CC---CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-cccEEEeccCccc-CCCCceEEEeeCCCc
Q 010008 254 PR---DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 322 (520)
Q Consensus 254 p~---~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~aDiv~~S~hK~l-~GprgG~I~~~~~~~ 322 (520)
++ .. .+++|+++|+++|++||+|++|. |+...+.. .++ . ..|+++ ++|.+ +|.|.|++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~-~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~--- 266 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKL-FAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE--- 266 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCce-eeehhcCCCCCEEE--EcchhhCCcccEEEEEcH---
Confidence 43 12 48899999999999999999965 55433321 111 1 246654 66998 567889999987
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEec--CCCCCeeE
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV 398 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~--~gt~~~~~ 398 (520)
++.+.+.........+++.. ..++...+++.... .++.+++.++.+.+.+.|.+. .+..+. .+ ...++
T Consensus 267 ---~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~ 338 (396)
T PRK02627 267 ---KVADVFTPGDHGSTFGGNPL-ACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMI 338 (396)
T ss_pred ---HHHhccCCCCCCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEE
Confidence 67666654322223344333 33333345665433 234566666667777766552 121111 12 23455
Q ss_pred EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 399 ~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.+. .+..++.+.|.+.||.+. |+ ....+|++.+.. .++++++++.+.|.++++
T Consensus 339 ~i~~~---~~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~----~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 339 GIELD---RPAAEIVKKALEKGLLIN----VT-----GDNVLRLLPPLI----ISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred EEEec---CcHHHHHHHHHHCCeEEe----ec-----CCCEEEEECCcc----cCHHHHHHHHHHHHHHHH
Confidence 66652 245667777777799994 32 236799986532 458999999999988775
No 273
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.70 E-value=7.5e-15 Score=147.66 Aligned_cols=298 Identities=22% Similarity=0.217 Sum_probs=199.3
Q ss_pred HHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hh-CCC----CCEEEEcCCCCCccccccccccccccccccceEE
Q 010008 145 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AI-LKP----HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 216 (520)
Q Consensus 145 ~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~---al-l~p----GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~ 216 (520)
++|+++..|.|. +.+||.+|+++-++-++ +. -.. -+.||+++-.||-+. .+++-.+++
T Consensus 115 q~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP----------ASAam~G~~ 180 (496)
T COG1003 115 QEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP----------ASAAMAGFK 180 (496)
T ss_pred HHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh----------hhHhhcCce
Confidence 489999999997 68999999976555444 43 222 368999987776443 233334468
Q ss_pred EEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC
Q 010008 217 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK 294 (520)
Q Consensus 217 ~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~ 294 (520)
+|.++.+ ++|.+|+|+|++++.+ ++.++.+.+|+.-+ ..++.+|++|.+++|..|..|+|..-+++.. ..|-.
T Consensus 181 VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~rPGd 255 (496)
T COG1003 181 VVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---ARPGD 255 (496)
T ss_pred EEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---ccccc
Confidence 8888887 6799999999999987 88889898888776 4589999999999999999999865444421 23333
Q ss_pred -cccEEEeccCcccCCCCc------eEEEeeCCCc---ch---h-hHHH-hhc--c----cCCCCCCCCChHHHHHHHHH
Q 010008 295 -YCDVVTTTTHKSLRGPRG------GMIFFKKDPV---LG---V-ELES-AIN--N----AVFPGLQGGPHNHTIGGLAV 353 (520)
Q Consensus 295 -~aDiv~~S~hK~l~Gprg------G~I~~~~~~~---~~---~-~l~~-~i~--~----~~~p~~~g~p~~~~iaala~ 353 (520)
++||+-..+||||+.|.| |-|.+++... .. + +..+ ..+ . .+....+|+..+..+ +.
T Consensus 256 ~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~---a~ 332 (496)
T COG1003 256 MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPI---AW 332 (496)
T ss_pred cccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHH---HH
Confidence 799999999999976654 4455544210 00 0 0000 000 0 000111333333222 22
Q ss_pred H-HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCC--CCeeEEEEec----CCCCCHHHHHHHHhhcCeEEcCC
Q 010008 354 C-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVLVDLR----PMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 354 a-l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt--~~~~~~vd~~----~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
+ +..+..++.+...+..+-|++++++.|+. .+++...+. ..|-+++|.+ ..|++..++.++|.++|+..-.-
T Consensus 333 ~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~ 411 (496)
T COG1003 333 AYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTM 411 (496)
T ss_pred HHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcc
Confidence 2 33444456777788889999999999976 566654333 4677888887 45788899999999999986544
Q ss_pred CCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHH
Q 010008 427 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLE 473 (520)
Q Consensus 427 ~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~ 473 (520)
++|- .+.+.+=|-. |..-+++++++.++++.++.+...+
T Consensus 412 ~FPl----iV~~tLMIEP----TEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 412 YFPL----IVAGTLMIEP----TESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred cCcc----ccccceeecC----CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4442 1344444421 2345689999999999888776643
No 274
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.69 E-value=6.4e-15 Score=155.83 Aligned_cols=298 Identities=20% Similarity=0.229 Sum_probs=192.4
Q ss_pred CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 180 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all 180 (520)
.+..+++.+.+++...+...- |.++ .|. ...++|+.+..++++++|++.+..+ +.+..||+||+.++.+.-
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl--~d~~--~~p---~a~~~E~~~v~~l~~l~~~~~~~~G--~~t~GgTean~lal~aar 140 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL--GDPD--ESP---AAAELEERVVNMLSDLLGAPEEASG--TFTSGGTEANLLALLAAR 140 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC--CCcc--cCh---hHHHHHHHHHHHHHHHhCCCCCCce--EEEcChHHHHHHHHHHHH
Confidence 334567777888877765432 3333 122 3568899999999999999744333 334556699997776541
Q ss_pred C-----C---CC------EEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCc-E
Q 010008 181 K-----P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK-L 245 (520)
Q Consensus 181 ~-----p---GD------~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pk-l 245 (520)
+ . +. +|+++.- +|++. .|...+.|...+.++ .++.+..+|++++++++.+.... +
T Consensus 141 ~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~-----~Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g~ 210 (460)
T COG0076 141 ERWRKRALAESGKPGGKPNIVCSET---AHFSF-----EKAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGGV 210 (460)
T ss_pred HHHHHHhhhcccccCCCCeEEecCc---chhHH-----HHHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCce
Confidence 1 1 11 5666553 34432 245667777555555 44446899999999999984444 1
Q ss_pred EEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEechhhccccc-ccccCC----CCCcccEEEeccCcccCCCCc-eEEEe
Q 010008 246 IIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVVAD----PFKYCDVVTTTTHKSLRGPRG-GMIFF 317 (520)
Q Consensus 246 Ii~~--~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~-~~~~~~----p~~~aDiv~~S~hK~l~Gprg-G~I~~ 317 (520)
|+.. .+..+...|+++|.+||+++++|+++|+|. .|.+. ...... -++++|.++.++||++..|.+ |++++
T Consensus 211 vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~-GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~ 289 (460)
T COG0076 211 VVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF-GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289 (460)
T ss_pred EEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc-cceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEE
Confidence 4443 333444789999999999999999999984 44442 221112 224799999999999888877 99999
Q ss_pred eCCCcchhhHHHhhccc--CCCC-------CCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC-CE
Q 010008 318 KKDPVLGVELESAINNA--VFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YK 387 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~--~~p~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G-~~ 387 (520)
+++. ++.+.+... ..++ ..|+......++....|+.+..++|.+..++..++++++++.|.+.| ++
T Consensus 290 rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e 365 (460)
T COG0076 290 RDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFE 365 (460)
T ss_pred ECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 9851 233222211 1111 12233333555566678877678899999999999999999999976 99
Q ss_pred EecCCCCCeeEEEEecCCC-CC-HHHHHHHHhhcCeEEcC
Q 010008 388 LVSGGSDNHLVLVDLRPMG-ID-GARVEKILDMASITLNK 425 (520)
Q Consensus 388 v~~~gt~~~~~~vd~~~~g-~~-~~~~~~~L~~~gI~v~~ 425 (520)
++..+ .+.++.++... .+ .......+++.|..+..
T Consensus 366 ~~~~p---~l~~V~fr~~~~~~~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 366 LVNEP---ELPIVAFRLKDDEDTLADLSERLDRRGWQVPA 402 (460)
T ss_pred eecCC---ccceEEEEcCCcccchhchHHHHHhcCceeec
Confidence 98754 33344444321 11 33455666678887765
No 275
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.4e-15 Score=148.64 Aligned_cols=166 Identities=22% Similarity=0.168 Sum_probs=125.4
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccc
Q 010008 124 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 203 (520)
Q Consensus 124 G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~ 203 (520)
||...|. .++..+.+| +|++.+-|--. -+.+.||..|+..++..++++||.|+..+--|||.++.-..
T Consensus 53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~- 120 (426)
T COG2873 53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSH- 120 (426)
T ss_pred Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHH-
Confidence 5544443 567788999 68888776543 35568999999999999999999999998889887532211
Q ss_pred cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhc
Q 010008 204 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 281 (520)
Q Consensus 204 ~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~ 281 (520)
.+...|. ++.+++ ..|++.++++|++ +||+|++..-.||. +.|+++|.+||+++|+++|+|.+-..
T Consensus 121 ---tl~~~Gi--~v~fvd------~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at 188 (426)
T COG2873 121 ---TLKRLGI--EVRFVD------PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT 188 (426)
T ss_pred ---HHHhcCc--EEEEeC------CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence 1122343 555633 2479999999999 99999999888887 78999999999999999999987332
Q ss_pred ccccccccCCCCC-cccEEEeccCcccCCCC---ceEEEee
Q 010008 282 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 318 (520)
Q Consensus 282 gli~~~~~~~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~ 318 (520)
...-.|++ ++|||+.|++||+.|-. ||+|+-.
T Consensus 189 -----pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 189 -----PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred -----ceecchhhcCCCEEEEeecccccCCccccceEEEeC
Confidence 23346777 89999999999997643 3555543
No 276
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.69 E-value=2.5e-15 Score=143.65 Aligned_cols=322 Identities=21% Similarity=0.232 Sum_probs=209.6
Q ss_pred ecCCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHH-HHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 99 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYID-ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 99 iasen~~----~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d-~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
.-..||. .|.|.+|-...+ ..|..|..+.||-.|++-+. .+| ..++++.+-+. .+...|+-.||.
T Consensus 72 FcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfdANa 141 (417)
T KOG1359|consen 72 FCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFDANA 141 (417)
T ss_pred ecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccccch
Confidence 3345553 588888877766 45677888889988877654 445 56778777765 344467889999
Q ss_pred HHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHh---hhcCCcEEEEc-
Q 010008 174 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA---ILFRPKLIIAG- 249 (520)
Q Consensus 174 ~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i---~~~~pklIi~~- 249 (520)
.++.++++|.|-|+.-.+.|.+.+ +|. .+.. .| ..+|.-.++... .+.|-|+|+..
T Consensus 142 g~feail~pedAvfSDeLNhASII-dGi-------rLck------ry------~h~dv~~l~~~l~~a~k~r~klv~TDg 201 (417)
T KOG1359|consen 142 GAFEAILTPEDAVFSDELNHASII-DGI-------RLCK------RY------RHVDVFDLEHCLISACKMRLKLVVTDG 201 (417)
T ss_pred HHHHHhcChhhhhhccccccchhh-hhh-------HHHh------hh------ccchhHHHHHHHHHhhhheEEEEEecc
Confidence 999999999999998887664432 221 1111 11 234444444322 22366777665
Q ss_pred -CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc---ccc--CCCCCcccEEEeccCcccCCCCceEEEeeCCCcc
Q 010008 250 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 323 (520)
Q Consensus 250 -~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~~--~~p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~ 323 (520)
.|.-+...|+++|.++++++|++|++|++|..|+... |.. .+....+|++..|+.|.+.|-.||++.+++
T Consensus 202 ~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~---- 277 (417)
T KOG1359|consen 202 VFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK---- 277 (417)
T ss_pred eeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh----
Confidence 3555558899999999999999999999999887633 111 122235789999999999999999999999
Q ss_pred hhhHHHhhcccCCCCCCCCC---hHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEE-
Q 010008 324 GVELESAINNAVFPGLQGGP---HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL- 399 (520)
Q Consensus 324 ~~~l~~~i~~~~~p~~~g~p---~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~- 399 (520)
.+.+.++..-.|++..+. ....+++.+ +..++.. .........|.+.+++.+...||.+... +|.+.
T Consensus 278 --~li~llrqr~RpylFSnslppavV~~a~ka--~dllm~s--~~~i~~~~a~~qrfr~~me~aGftIsg~---~hPI~p 348 (417)
T KOG1359|consen 278 --PLISLLRQRSRPYLFSNSLPPAVVGMAAKA--YDLLMVS--SKEIQSRQANTQRFREFMEAAGFTISGA---SHPICP 348 (417)
T ss_pred --hHHHHHHhcCCceeecCCCChhhhhhhHHH--HHHHHhh--HHHHHHHHHHHHHHHHHHHhcCceecCC---CCCccc
Confidence 577766655555554332 233344333 3333321 3345667778888888888899998542 34322
Q ss_pred EEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+-+.... -...+.+.|...||.|-.-+.|-- |.+...||+-..+. .+++|++++.+++.++.+.
T Consensus 349 v~lGda~-lA~~~ad~lLk~Gi~Vigfs~PvV--P~gkariRVqiSAa----Ht~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 349 VMLGDAR-LASKMADELLKRGIYVIGFSYPVV--PKGKARIRVQISAA----HTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred eecccHH-HHHHHHHHHHhcCceEEeecCCcC--CCCceEEEEEEehh----cCHHHHHHHHHHHHHHHHh
Confidence 2122111 123355666788999854333321 23445688866654 4599999999999887653
No 277
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.68 E-value=2.1e-14 Score=148.54 Aligned_cols=297 Identities=13% Similarity=0.152 Sum_probs=191.1
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC-CCCCEEEEcCCCCCccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 211 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all-~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~ 211 (520)
+.++.+.++ .+.+.++++|+.+.+ +.+.+...|||.++.+++..++ ++||+|++.. .++..+.. ......
T Consensus 34 s~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-----~FG~r~~~--eia~~~ 104 (374)
T TIGR01365 34 SKLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-----SFGKGWVT--DVTKQL 104 (374)
T ss_pred CHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-----HHHHHHHH--HHHHhc
Confidence 345555444 567899999998533 3355667888999999999999 5899999753 22222210 112224
Q ss_pred cce-EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--CCCCCCHHHHHHHHHHhCCEEEEechhhcccccccc
Q 010008 212 SIY-FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 288 (520)
Q Consensus 212 g~~-~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~--~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~ 288 (520)
|.. ...+..+ .+..+|+++++. +.. |++.++. .+...|++++...+ +++++++|+.-+.|..
T Consensus 105 g~~~v~~l~~~---~g~~~~~~~ve~-----~~~-v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~---- 169 (374)
T TIGR01365 105 KLPDVRVLEAE---YGKLPDLKKVDF-----KND-VVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQ---- 169 (374)
T ss_pred CCCCcEEEcCC---CCCCCCHHHcCC-----CCC-EEEecCCCchheecccccccccc--CCCcEEEEccchhcCC----
Confidence 441 3333322 345789999872 222 4444333 33366776555322 4899999987555543
Q ss_pred cCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcc---------------------cCC-CCCCCCChH
Q 010008 289 VADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---------------------AVF-PGLQGGPHN 345 (520)
Q Consensus 289 ~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~---------------------~~~-p~~~g~p~~ 345 (520)
+..+...|++++|.+|+|.+|.| ++++.+++ ..++++. ... ..+..+|+.
T Consensus 170 -~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v 242 (374)
T TIGR01365 170 -DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSM 242 (374)
T ss_pred -CCChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHH
Confidence 22233589999999999999999 88888874 2222110 000 122346677
Q ss_pred HHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHCC-CEEecC--CCCCe-eEEEEecCCCC-----C-----HH
Q 010008 346 HTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLVSG--GSDNH-LVLVDLRPMGI-----D-----GA 410 (520)
Q Consensus 346 ~~iaala~al~~~~~~-~~~~~~~~i~~na~~l~~~L~~~G-~~v~~~--gt~~~-~~~vd~~~~g~-----~-----~~ 410 (520)
+.+.++..+++.+.++ +.+...++..++++.+++++++.| +.++.. ...+. ...+.+...++ + ..
T Consensus 243 ~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~ 322 (374)
T TIGR01365 243 LCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAK 322 (374)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHH
Confidence 7777777778766654 689999999999999999999998 666652 11223 22334433333 2 57
Q ss_pred HHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 411 RVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 411 ~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++.+.|.+.||.+.. |-. ......+|||+... ++.+|++.+.++|+-+..
T Consensus 323 ~~~~~l~~~gi~i~~----G~~-~~~~~~fRIg~~G~----i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 323 ELISTLEKEGVAYDI----GSY-RDAPSGLRIWCGAT----VEKSDLECLCPWLDWAFA 372 (374)
T ss_pred HHHHHHHHCCEEEec----ccc-ccCCCceEEecCCc----CCHHHHHHHHHHHHHHHh
Confidence 788999999998843 321 22346899998543 558999999999986653
No 278
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.68 E-value=6.2e-14 Score=147.45 Aligned_cols=317 Identities=14% Similarity=0.108 Sum_probs=184.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
.+|.|.+++...+.. +..+.+ .++ .+...+ +.+.++++++.+. .+..+||++||..++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~~~--~~~--~~~~~~----~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLTSR--AFY--NDVLGL----AEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cccccc--ccc--CHHHHH----HHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 578899998887643 322221 122 222333 3466777777643 2456899999999888653
Q ss_pred ------CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 181 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 181 ------~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~---~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
..+++|+..+-.+.|.... .+...+.. +.....+..+. -...|++++++.++..++++|++..
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIG-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHH-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 1357888877544222110 11111110 00000000000 0124899999998633789999876
Q ss_pred CCCCC--CCC----HHHHHHHHHHhCCEEEEechhhccccccccc-CCCCC--cccEEEeccCcccCC--CCceEEEeeC
Q 010008 251 SAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRG--PRGGMIFFKK 319 (520)
Q Consensus 251 s~~p~--~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~~--~aDiv~~S~hK~l~G--prgG~I~~~~ 319 (520)
+.+++ ..+ +++|+++|++||+++|+|++|. |+...+.. ..... ..|++++| |++.| ++.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 65554 455 9999999999999999999974 44322211 11111 25777654 99854 4779999988
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC----CCE-EecCCCC
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYK-LVSGGSD 394 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~----G~~-v~~~gt~ 394 (520)
++.+.+.........+++.... ++...+++.+.++++ .+++.+..+.+.+.|.+. ++. .+.+ .
T Consensus 264 ------~~~~~~~~~~~~~t~~~~~~~~-~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~--~ 331 (400)
T PTZ00125 264 ------DVMLVIKPGEHGSTYGGNPLAC-AVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRG--K 331 (400)
T ss_pred ------HHHhhccCCCCCCCCCcCHHHH-HHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEec--c
Confidence 6766665432222334433333 333345666544333 344555566677777552 221 1222 2
Q ss_pred CeeEEEEecC-CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRP-MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 395 ~~~~~vd~~~-~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
..+.++.+.. .+.+...+.+.|.+.||.+. |+ ....|||+.+.. ++++|++++.+.|.++++.
T Consensus 332 g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~----~~-----~~~~lRi~~~~~----~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 332 GLLNAIVFDHSDGVNAWDLCLKLKENGLLAK----PT-----HDNIIRFAPPLV----ITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred cEEEEEEEccCcchHHHHHHHHHHHCCeEEe----ec-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHHHH
Confidence 3344555542 23345567777778999984 32 246899997633 4589999999999988764
No 279
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.67 E-value=1.3e-15 Score=139.30 Aligned_cols=163 Identities=26% Similarity=0.312 Sum_probs=116.1
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccC
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 223 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d 223 (520)
++++++++|+.+.+. +.+. ++|++|+..++.++.++|++|++.++.|.++.. . .....|. +++.++.+
T Consensus 5 ~~~~l~~~~~~~~~~--~~~~-~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~--~~~~v~~~ 72 (170)
T cd01494 5 LEEKLARLLQPGNDK--AVFV-PSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGA--KPVPVPVD 72 (170)
T ss_pred HHHHHHHHcCCCCCc--EEEe-CCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCC--EEEEeccC
Confidence 347889999644432 3343 477799999999999999999999998877652 1 1233444 56666655
Q ss_pred CCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEE
Q 010008 224 EST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 300 (520)
Q Consensus 224 ~~~-~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~ 300 (520)
..+ ...|.+.+++.....+|++++++.+++++ ..|+++|.++|+++|+++++|++|..+.........+..++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 322 22333356555544488999998777665 668899999999999999999998776654322112223799999
Q ss_pred eccCcccCCCCceEEEee
Q 010008 301 TTTHKSLRGPRGGMIFFK 318 (520)
Q Consensus 301 ~S~hK~l~GprgG~I~~~ 318 (520)
.|+||++.+|++|+++++
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999988888999874
No 280
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.67 E-value=8.9e-14 Score=146.42 Aligned_cols=310 Identities=13% Similarity=0.096 Sum_probs=183.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
..|.|.+|+...+.. +..+.+ .+ ..+...+++ +++++++|.+. .+..+||++||..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~~--~~--~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSSR--AF--YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccccc--cc--CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 478999998877643 322222 11 223334444 57788888642 3556899999999888641
Q ss_pred -----CCC-CEEEEcCCCCCccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhc--C
Q 010008 181 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILF--R 242 (520)
Q Consensus 181 -----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-----~-----~~v~~~~d~~~~~iD~d~le~~i~~~--~ 242 (520)
.+| +.|+.....|.|.... .+...+.. + ..+.++ ..|+++++++++.. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLG-------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHH-------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 233 5677666554332100 11111110 0 011111 23789999888643 3
Q ss_pred CcEEEEcCCCCC--CCCC----HHHHHHHHHHhCCEEEEechhhcccccccccC-C-CCC-cccEEEeccCcccCC--CC
Q 010008 243 PKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSLRG--PR 311 (520)
Q Consensus 243 pklIi~~~s~~p--~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~-~-p~~-~aDiv~~S~hK~l~G--pr 311 (520)
..+|++.....+ ...+ +++|+++|+++|+++|+|++| .|+...+... . ... ..|++++| |.+.| ++
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCC
Confidence 346666533322 2333 899999999999999999997 5654333211 0 011 35777654 99854 67
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEec-
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 390 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~- 390 (520)
.|++++++ ++.+.+.........+++... .++...+|+.+.+++ ..++...+.+++.+.|++.+..++.
T Consensus 264 ig~v~~~~------~i~~~~~~~~~~~t~~~~p~~-~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~~~~~~~ 333 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKPGEHGSTYGGNPLA-CAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLPKPIITE 333 (401)
T ss_pred cEEEEEcH------HHHhhccCCCCCCCCCCCHHH-HHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhccCCceeE
Confidence 78899887 676666543333334444333 333344677665433 3456666688888888886544432
Q ss_pred -CCCCCeeEEEEecCC--CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 391 -GGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 391 -~gt~~~~~~vd~~~~--g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.+ ...+..+.+... +.+..++.+.|.+.||.+. |. .+..+||+++. .++++|++++.+.|.++
T Consensus 334 ~~g-~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~----~~-----~~~~lRi~p~l----~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 334 VRG-RGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAK----PT-----HGNIIRLAPPL----VITEEQLDEGLEIIKKV 399 (401)
T ss_pred Eee-cCeeEEEEeccCcchhHHHHHHHHHHhCCEEEE----ec-----CCCEEEEeCCc----cCCHHHHHHHHHHHHHH
Confidence 12 223333334322 1245667788889999984 21 25689998763 25699999999999876
Q ss_pred H
Q 010008 468 V 468 (520)
Q Consensus 468 l 468 (520)
+
T Consensus 400 l 400 (401)
T TIGR01885 400 I 400 (401)
T ss_pred h
Confidence 5
No 281
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.66 E-value=7e-14 Score=147.30 Aligned_cols=308 Identities=15% Similarity=0.112 Sum_probs=183.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l 180 (520)
.-.|.|.+++...+.+....+. ....+...+++ ++++++++.+. ....+||++||.+++... .
T Consensus 56 h~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l~----~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~ 121 (403)
T PRK05093 56 HCHPALVKALKEQGEKLWHISN-----VFTNEPALRLA----KKLIDATFAER-----VFFANSGAEANEAAFKLARRYA 121 (403)
T ss_pred CCCHHHHHHHHHHHHhcCcccC-----ccCCHHHHHHH----HHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHH
Confidence 3578899988887754221111 11222223333 56777776542 244689999999888743 1
Q ss_pred -----CCCCEEEEcCCCC-Cccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCc
Q 010008 181 -----KPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPK 244 (520)
Q Consensus 181 -----~pGD~Vl~~~~~~-~ghls~g~~~~~~~v~~~g~~-----~-----~~v~~~~d~~~~~iD~d~le~~i~~~~pk 244 (520)
...++|+..+-.+ |.++ + .++..+.. + ..+.++ ..|++++++.+.+ +++
T Consensus 122 ~~~~~~~~~~ii~~~~~~HG~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~a 186 (403)
T PRK05093 122 CDRHGPEKTEIIAFHNSFHGRTL--F------TVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDD-HTC 186 (403)
T ss_pred hhcCCCCCCeEEEEcCCcCCchh--h------hHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcC-CeE
Confidence 1235677776543 3221 0 11111100 0 011111 2388999998876 789
Q ss_pred EEEEcCCCCCC--CC-----CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCccc-CCCCc
Q 010008 245 LIIAGASAYPR--DF-----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRG 312 (520)
Q Consensus 245 lIi~~~s~~p~--~~-----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l-~Gprg 312 (520)
+|++. |.++. .. .+++|+++|++||+++|+|++|. |+...+.. .+.. ..|+. |++|++ +|+|.
T Consensus 187 aiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~-~~~~~~~~~pdi~--s~sK~l~~G~ri 261 (403)
T PRK05093 187 AVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDL-FAYMHYGVTPDIL--TSAKALGGGFPI 261 (403)
T ss_pred EEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccc-hhhhhcCCCCCEE--EecccccCCcce
Confidence 99888 34332 22 28899999999999999999965 66444421 1111 24554 667998 67889
Q ss_pred eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCC--EEe-
Q 010008 313 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLV- 389 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~--~v~- 389 (520)
|++++++ ++.+.+.........+++...+.+++ .+|+.+..+ ++.+++.++.+.+.+.|++.+. .++
T Consensus 262 g~vv~~~------~i~~~l~~~~~~~t~~~~~~~~~aa~-a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 262 GAMLTTA------EIASHFKVGTHGSTYGGNPLACAVAE-AVFDIINTP---EVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred EEEEEcH------HHHhhcCCCCCCCCCCCCHHHHHHHH-HHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 9999988 67776654333333444444444433 456655332 3457777888889999887432 121
Q ss_pred -cCCCCCeeEEEEecCCC-CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 390 -SGGSDNHLVLVDLRPMG-IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 390 -~~gt~~~~~~vd~~~~g-~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..+ ...++++.+.+.. -+..++...|.+.||.+. |+ +.+.+|++.+.. ++++|++++.+.|.++
T Consensus 332 ~~~~-~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~----~~-----g~~~lRl~~~~~----~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 332 EIRG-MGLLIGAELKPQYKGRARDFLNAAAEEGVMVL----VA-----GPDVLRFAPSLV----IEEADIDEGLARFEKA 397 (403)
T ss_pred eEee-CceEEEEEecCcchhHHHHHHHHHHHCCeEEe----cC-----CCCEEEEeCCCC----CCHHHHHHHHHHHHHH
Confidence 111 1344555554321 124556677777899984 32 246899976543 4589999999999988
Q ss_pred HH
Q 010008 468 VE 469 (520)
Q Consensus 468 l~ 469 (520)
+.
T Consensus 398 l~ 399 (403)
T PRK05093 398 VA 399 (403)
T ss_pred HH
Confidence 75
No 282
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=9.9e-15 Score=137.52 Aligned_cols=279 Identities=17% Similarity=0.173 Sum_probs=183.1
Q ss_pred cCCCCCCCceeeecCChH-HHHHHHHHhhCCCC-CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCC
Q 010008 152 FNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 229 (520)
Q Consensus 152 fg~~~~~~~~~V~~~sGs-~A~~~~l~all~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~i 229 (520)
-++.++ |+++..|+ +.+.+++++.+.|| ++|+...|+|+.+ ... ....+ .+++.+++++ ++.+
T Consensus 82 kpLt~d----nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY------~v~--A~iNd--~eVvkvpl~p-dF~l 146 (375)
T KOG0633|consen 82 KPLTSD----NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMY------VVD--AAIND--AEVVKVPLNP-DFSL 146 (375)
T ss_pred CCCCcc----ceEEecCcHHHHHHHHhheecCCccceeecCCcceeE------EEE--eecCC--ceEEEecCCC-Cccc
Confidence 456665 67778899 88899999999999 9999998877532 111 12233 3777888875 7999
Q ss_pred CHHHHHHHhhhc-CCcEEEEcCCCCCC--CCCHHHHHHHHHHh-CCEEEEechhhcccccccc-cCCCCCccc-EEEecc
Q 010008 230 DYDMLEKTAILF-RPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPFKYCD-VVTTTT 303 (520)
Q Consensus 230 D~d~le~~i~~~-~pklIi~~~s~~p~--~~d~~~i~~ia~~~-g~~li~D~Ah~~gli~~~~-~~~p~~~aD-iv~~S~ 303 (520)
|.|++.+.++.. ++|++++++|+||+ .+-.+.|.+|..-- |.++++|+| |..+...+. .+..-.|.. ++.-|+
T Consensus 147 nvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEA-YidFsg~~S~~~lV~kYpNLivlqTl 225 (375)
T KOG0633|consen 147 NVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEA-YIDFSGVESRMKLVKKYPNLIVLQTL 225 (375)
T ss_pred cHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeee-eEeeccccccchHhHhCCceeehhhh
Confidence 999999988765 78999999999998 55555666665432 789999999 434332111 111112555 566899
Q ss_pred Cccc--CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 304 HKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 304 hK~l--~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
+|++ +|-|.|+-+++. .+++.+++...|+..+.+. ..+|++ |+..-.....+.+.+.+.+.+.+|.+.|
T Consensus 226 SKsfGLAGiRvG~~~~~~------~ia~iln~~KaPYNiS~~~--s~~AL~-Als~~n~kkme~~rdaiv~er~RL~keL 296 (375)
T KOG0633|consen 226 SKSFGLAGIRVGYGAFPL------SIAEILNRAKAPYNISVAG--SVAALA-ALSDSNGKKMEDVRDAIVRERERLFKEL 296 (375)
T ss_pred hhhcCcceeEeecccccH------HHHHHHHhccCCccccchh--HHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 9985 788999999988 6888888777776543321 233333 2221111223677888888899999999
Q ss_pred HH-CCCEEecCCCCCeeEEEEecCC--CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHH
Q 010008 382 VE-LGYKLVSGGSDNHLVLVDLRPM--GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 382 ~~-~G~~v~~~gt~~~~~~vd~~~~--g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
.+ .++.-+.+|.+.+++++.+... ++......+.+...|+.|+.. |.. +...|++||... ++|+-.
T Consensus 297 t~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfr---gse-~~c~G~lRitvG-------t~Eent 365 (375)
T KOG0633|consen 297 TEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFR---GSE-EGCKGYLRITVG-------TPEENT 365 (375)
T ss_pred hcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEc---CCc-cccceeEEEEcC-------Ccccch
Confidence 88 3444345667888888877532 222233445567799999742 221 235788998542 235555
Q ss_pred HHHHHHHH
Q 010008 459 AIADFIHE 466 (520)
Q Consensus 459 ~la~~i~~ 466 (520)
-+.+.+++
T Consensus 366 vL~k~~K~ 373 (375)
T KOG0633|consen 366 VLMKCLKQ 373 (375)
T ss_pred HHHHHHHh
Confidence 55555544
No 283
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.66 E-value=8.6e-14 Score=146.30 Aligned_cols=310 Identities=16% Similarity=0.122 Sum_probs=183.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
-.|.|.+|+...+.+.+..+ ..+ .++...+++ ++++++++.+. ....+||++||.+++....
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~la----~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIG---NGY--TNEPVLRLA----KKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 47889988888776432111 111 123233333 67777777542 2446899999999888651
Q ss_pred ---CC-CCEEEEcCCCC-Cccccccccccccccccccce-----E-----EEEEcccCCCCCCCCHHHHHHHhhhcCCcE
Q 010008 181 ---KP-HDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKL 245 (520)
Q Consensus 181 ---~p-GD~Vl~~~~~~-~ghls~g~~~~~~~v~~~g~~-----~-----~~v~~~~d~~~~~iD~d~le~~i~~~~pkl 245 (520)
.+ .++|+..+-.| |.+. + .+...+.. + .+..++ ..|++++++++.+ ++++
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~aa 182 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTL--F------TVSVGGQPKYSQGFAPLPGGIKHAP------YNDLAAAKALISD-KTCA 182 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccH--H------HHHhcCCcccccCCCCCCCceEEeC------CCCHHHHHHHhcc-CeEE
Confidence 12 35677776543 3221 0 11111110 0 011111 2388999999876 7888
Q ss_pred EEEcCCCCC-C-----CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC-cccEEEeccCccc-CCCCceEE
Q 010008 246 IIAGASAYP-R-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMI 315 (520)
Q Consensus 246 Ii~~~s~~p-~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~-~aDiv~~S~hK~l-~GprgG~I 315 (520)
|++...+.. + ...+++|+++|++||+++|+|++| .|+...|.... .+. ..|++ ++.|.+ .|.+.|++
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav 259 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAM 259 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEE
Confidence 988743322 2 234899999999999999999998 66633332110 111 35777 456998 66778999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC--CEEec--C
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS--G 391 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G--~~v~~--~ 391 (520)
++++ ++.+.+.......+.++.... .++..++++.+.. .+..+++.++.+++.+.|++.+ +.++. .
T Consensus 260 ~~~~------~i~~~~~~~~~~~t~~~~p~~-~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vr 329 (397)
T TIGR03246 260 LTTT------EIAAHLKVGTHGTTYGGNPLA-CAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIR 329 (397)
T ss_pred EEcH------HHHHhccCCCcCCCCCCCHHH-HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeee
Confidence 9987 676666543222233333333 3333345665533 3456777788888888887743 22222 1
Q ss_pred CCCCeeEEEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 392 gt~~~~~~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+ ...++.+.+.+. ......+.+.|.+.||.+.. + .++.+|+..+.. ++++|++++.+.+.+++..
T Consensus 330 g-~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~---~------g~~~lR~~p~~~----~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 330 G-KGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI---A------GPNVVRFAPSLV----ISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred c-CceEEEEEEcCchhhHHHHHHHHHHHCCeEEee---c------CCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Confidence 1 122333333221 11245677788889999842 1 236899975533 5699999999999888753
No 284
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.6e-14 Score=152.27 Aligned_cols=292 Identities=19% Similarity=0.246 Sum_probs=194.2
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 222 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~ 222 (520)
+++.+++.||+++..+ +++|| .||.+++++++.|||.||+...+|-++. || +-++|. .++++..
T Consensus 75 Aqe~aA~~fgAd~tyF-----vvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g-------lilaGa--~Pvyl~p 139 (557)
T COG1982 75 AQELAARVFGADHTYF-----VVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG-------LILAGA--TPVYLEP 139 (557)
T ss_pred HHHHHHHHhCCCceEE-----EECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH-------HHHcCC--ceEEecC
Confidence 4578899999998632 25777 8999999999999999999998886653 33 334555 5554322
Q ss_pred --CCC---CCCCCHHHHHHHhhhcC-C-cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCC-C
Q 010008 223 --DES---TGLVDYDMLEKTAILFR-P-KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-F 293 (520)
Q Consensus 223 --d~~---~~~iD~d~le~~i~~~~-p-klIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p-~ 293 (520)
|+. -+.|+.+.+++.+.+++ - |++++..++|-+ ..|.++|.+.++..++|+.+|.+|-+.....+..+.+ .
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 221 15789999988776632 3 678888887655 8899999999999999999999987665544444432 2
Q ss_pred -CcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH----H
Q 010008 294 -KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY----Q 367 (520)
Q Consensus 294 -~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~----~ 367 (520)
.++|+++-|+||.+++..- .+|..++... -..++++.+..-...++|+...+|++.+|-......+ ++. .
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~---~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G-~~l~~~~~ 295 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRA---VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAG-RELWQEVI 295 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCcc---CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhh-HHHHHHHH
Confidence 2789999999999977554 6777765200 1234455443334467889999999987544333222 333 4
Q ss_pred HHHHHHHHHHHHHHHH-CCCEEecCCC--------------------CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCC
Q 010008 368 NKVVSNCRALASRLVE-LGYKLVSGGS--------------------DNHLVLVDLRPMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~-~G~~v~~~gt--------------------~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
+...+.++.+.+...+ .+++++.++. |.-=+.+.....|+++..+.+.|++.||...+.
T Consensus 296 ~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~ 375 (557)
T COG1982 296 DEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEET 375 (557)
T ss_pred HHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHHHcCCeeeec
Confidence 5555666666666655 3566665431 111123334467999999999999999998653
Q ss_pred CCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 427 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 427 ~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
. +.+ --+=++ +.. |-...+++.+.++.+
T Consensus 376 ~---d~~----~lll~~-~~~---gk~~~lv~~L~~f~r 403 (557)
T COG1982 376 G---DYS----NLLLFS-PGI---GKWQTLVDRLLEFKR 403 (557)
T ss_pred C---Cce----eeEEee-ecc---chHHHHHHHHHHHHH
Confidence 1 110 011122 111 455678888888887
No 285
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.64 E-value=1.1e-13 Score=157.07 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=190.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcc--h-hHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN--E-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI 179 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~--~-~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al 179 (520)
++|+.|++++.+... .|+. |.+ |... + ..+.+. ..+..+++++|++.+ |+..+.++ .+..++++++
T Consensus 116 ~~P~~v~~~i~~~~~-~~Ta-ytP---YqaEisQG~lqal~-~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~ 185 (993)
T PLN02414 116 HVPPVILRNILENPG-WYTQ-YTP---YQAEIAQGRLESLL-NYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCN 185 (993)
T ss_pred cCCHHHHHHHHhChH-HHhh-cCC---CchHHHHHHHHHHH-HHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHH
Confidence 478888888876542 1221 211 2211 1 122233 356789999999985 44445554 6666676676
Q ss_pred -CCCC--CEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 010008 180 -LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 255 (520)
Q Consensus 180 -l~pG--D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~- 255 (520)
+++| |+|++.+..|++...... + .....|. +++.++++. .| ...+ ..-.+++.+|++.+
T Consensus 186 ~~~~g~~~~VlVs~~~hP~~~~v~~-t---~a~~~Gi--eV~~v~~~~----~~------~~~~-~v~~vlvq~P~~~G~ 248 (993)
T PLN02414 186 NILKGKKKKFLIASNCHPQTIDVCQ-T---RADGLGL--EVVVADEKD----FD------YSSG-DVCGVLVQYPATDGE 248 (993)
T ss_pred hcccCCCCEEEEcCccCHhHHHHHH-H---hhhhcCC--EEEEecchh----hc------cccC-ceEEEEEecCCCCeE
Confidence 5655 789999988876543211 0 1122343 555544431 11 0111 22234455665444
Q ss_pred CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCccc-----CCCCceEEEeeCCCcchhhHHH
Q 010008 256 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELES 329 (520)
Q Consensus 256 ~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l-----~GprgG~I~~~~~~~~~~~l~~ 329 (520)
..|+++|.++||++|+++++ +++..++.... .|-+ +|||++++.|||+ +||+.|+++++++ +.+
T Consensus 249 v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~---~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~------~~r 318 (993)
T PLN02414 249 VLDYAEFVKNAHANGVKVVM-ATDLLALTMLK---PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE------YKR 318 (993)
T ss_pred EcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC---CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH------HHh
Confidence 78999999999999999999 77766655321 2223 8999999999997 7788899999883 322
Q ss_pred hhcc---------cCCCC--------------CCCCChHHHHHHHHHHH-----HHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 330 AINN---------AVFPG--------------LQGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 330 ~i~~---------~~~p~--------------~~g~p~~~~iaala~al-----~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
.+-. .-.++ -.++.+.....++.+++ ..+...+.++..+++...+.++++.|
T Consensus 319 ~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L 398 (993)
T PLN02414 319 LMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGL 398 (993)
T ss_pred hCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 2210 00000 03444553322332222 23344567888899999999999999
Q ss_pred HHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 382 VELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 382 ~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
.+.|+++..+ .....+.+.+. +..++.+.|.+.||.++.. ..+.+|++....+| ++|++.++
T Consensus 399 ~~~G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~---------~~~~lrvs~~e~~T----~edId~L~ 460 (993)
T PLN02414 399 KKLGFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVV---------DANTVTVSFDETTT----LEDVDKLF 460 (993)
T ss_pred hhcCCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEe---------cCCeEEEEeeccCC----HHHHHHHH
Confidence 8889888654 22233444442 3577889999999987542 13469999998876 89999999
Q ss_pred HHHHH
Q 010008 462 DFIHE 466 (520)
Q Consensus 462 ~~i~~ 466 (520)
+.+..
T Consensus 461 ~~l~~ 465 (993)
T PLN02414 461 KVFAG 465 (993)
T ss_pred HHHcc
Confidence 99963
No 286
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.61 E-value=3.5e-13 Score=138.10 Aligned_cols=336 Identities=14% Similarity=0.089 Sum_probs=208.2
Q ss_pred hccceEecCCCCChHHHHHHHhhhhhccCCCCCC-CCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHH
Q 010008 93 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 171 (520)
Q Consensus 93 ~~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p-~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A 171 (520)
.+.+++.|++..+|+.|++++...+.+....|.- -...+.+.++.+.++ .+.+.++++|+++.+ +.+-+...+||.+
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~ 80 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDE-YGVVFLQGGSSLQ 80 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CeEEEEeccHHHH
Confidence 3567899999999999999999888765433321 011123455555555 577899999999533 3355556677799
Q ss_pred HHHHHHhhCCCCCEEE-EcCCCCCccccccccccccccccccceEEEEEcccC-CCCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 172 NFEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 172 ~~~~l~all~pGD~Vl-~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d-~~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
+.++.+.|+++||+++ ... .|+++..+.- .....| ..+.+...-. ..+..+++++++ +.+ +.+.|.++
T Consensus 81 ~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~-d~~~v~~t 150 (364)
T PRK12462 81 FSMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA-RAPFRHYV 150 (364)
T ss_pred HHHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC-CCcEEEEc
Confidence 9999999999999765 443 3444433211 111123 1232221000 012356666651 222 45777666
Q ss_pred CCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhh
Q 010008 250 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 326 (520)
Q Consensus 250 ~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~ 326 (520)
.....+ ..+ ++.+.+++++++|++-..+.. +.++..-|++.++.+|.|. |.| ++++.++ +
T Consensus 151 ~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~-----pid~~~~dvi~agsQKnlg-P~Gltvvivs~------~ 213 (364)
T PRK12462 151 SNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSR-----PFDVEAYGMVYAHAQKNLG-PAGVTVAIIRR------A 213 (364)
T ss_pred cCCCCceEecC-----cccccCCCeEEEEcCchhhCC-----CCChHHccEEEeeccccCC-CCceEEEEECH------H
Confidence 443332 333 233346999999996443322 2233334999999999995 888 8888887 3
Q ss_pred HHHhhcccCC-----------CCCCCCChHHHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHC-CCEEec--
Q 010008 327 LESAINNAVF-----------PGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKVVSNCRALASRLVEL-GYKLVS-- 390 (520)
Q Consensus 327 l~~~i~~~~~-----------p~~~g~p~~~~iaala~al~~~~~~--~~~~~~~~i~~na~~l~~~L~~~-G~~v~~-- 390 (520)
..++...... ....-+|....|.++..+|+.+.++ +.+...++..+.++.+++.+.+. |+....
T Consensus 214 al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~ 293 (364)
T PRK12462 214 LLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH 293 (364)
T ss_pred HHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 3333322110 0123488999999999999988766 77899999999999999999884 343322
Q ss_pred CCCCCeeE-EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 391 GGSDNHLV-LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 391 ~gt~~~~~-~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+...+.+. .+.+....+ .+++.+.+++.|+.- +-|+.+ -+|+|+|+-- .++.++++.+++++++.-+
T Consensus 294 ~~~RS~mnv~f~~~~~~l-~~~f~~~a~~~gl~~----lkGhr~---vgg~Ras~yn----a~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 294 RAARSTMNVAFRFRQPRL-DTLFKEQSTEAGFCG----LSGHRS---IGGIRASLYN----AVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred hhhcCcceEEEEcCCHHH-HHHHHHHHHHCCCcc----ccCCcc---cCceEEEcCC----CCCHHHHHHHHHHHHHHHH
Confidence 21122322 233332221 244556677899887 334432 5789998732 4668999999999987543
No 287
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.61 E-value=2.6e-13 Score=143.05 Aligned_cols=315 Identities=19% Similarity=0.146 Sum_probs=186.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
-.|.|.+|+...+.+-+.. +..|+ ++...+ ..++++++++.+. .+..+||++||.+++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~---~~~~~--~~~~~~----la~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHT---GNGYT--NEPVLR----LAKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhcccc---cCccC--CHHHHH----HHHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHh
Confidence 4788888888877542211 11111 222222 2367777776542 2456899999998887641
Q ss_pred ----CCCCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 010008 181 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA 252 (520)
Q Consensus 181 ----~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~---~~~iD~d~le~~i~~~~pklIi~~~s~ 252 (520)
....+|+..+..|.|... + .+.+.+.. +..-+-++.+. ....|++++++.+.+ ++++|++. |.
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv 192 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PI 192 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CC
Confidence 245788888876533311 1 11122210 00000000000 013588999999876 78888886 44
Q ss_pred CCC-------CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCccc-CCCCceEEEeeCC
Q 010008 253 YPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKD 320 (520)
Q Consensus 253 ~p~-------~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l-~GprgG~I~~~~~ 320 (520)
++. ...+++|+++|++||+++|+|++| .|+...+.. ..+. ..|++ |+.|.+ .|++.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~-~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGEL-YAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcch-hhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH-
Confidence 432 235889999999999999999997 565433321 1111 24664 667998 677889999987
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC--CEEec--CCCCCe
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS--GGSDNH 396 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G--~~v~~--~gt~~~ 396 (520)
++.+.+.........+++.....+ ...+|+.+..+ +..+++.++.+++.+.|.+.+ +.++. .+ ...
T Consensus 268 -----~~~~~~~~~~~~~t~~~~pl~~aa-a~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg-~Gl 337 (406)
T PRK12381 268 -----KCASVMTVGTHGTTYGGNPLASAV-AGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFSEIRG-LGL 337 (406)
T ss_pred -----HHHhhcCCCCCCCCCCCCHHHHHH-HHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEEEEec-CeE
Confidence 677766543333333443333333 33456655432 356777777888888887743 32222 11 123
Q ss_pred eEEEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 397 LVLVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 397 ~~~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
++++.+... .-....+.+.|.+.||.+.. . .+..||++.+.. ++++|++++.+.|.+++..
T Consensus 338 ~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~----~-----g~~~lRl~p~~~----~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 338 LIGCVLNAEYAGKAKQISQEAAKAGVMVLI----A-----GPNVVRFAPALN----ISEEEITTGLDRFARACER 399 (406)
T ss_pred EEEEEecCchhhHHHHHHHHHHHCCcEEee----C-----CCCEEEEeCCcc----CCHHHHHHHHHHHHHHHHH
Confidence 445555321 01235677888899999842 1 235899987643 4589999999999998864
No 288
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.60 E-value=2.3e-13 Score=135.22 Aligned_cols=247 Identities=18% Similarity=0.265 Sum_probs=140.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCC-CC---------Ccccccccccc
Q 010008 135 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PH---------GGHLSHGFMTP 204 (520)
Q Consensus 135 ~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~-~~---------~ghls~g~~~~ 204 (520)
.-.|.+| +-+++.||++.+ .|.-|..|||+|+..++.++++|||+++...- +| .++ ..|
T Consensus 54 ~GRd~le----~iyA~vfgaE~A--LVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~-~~G---- 122 (403)
T PF06838_consen 54 IGRDKLE----RIYADVFGAEDA--LVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGN-GPG---- 122 (403)
T ss_dssp HHHHHHH----HHHHHHCT-SEE--EEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSS-SSS----
T ss_pred ccHHHHH----HHHHHHhCchhh--hhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCC-CCC----
Confidence 4467777 568899999964 25667789999999999999999999997542 22 111 111
Q ss_pred ccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcC-CCCCC--CCC---HHHHHHHHHHh--CCEEEEe
Q 010008 205 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYPR--DFD---YPRMRQIADAV--GALLMMD 276 (520)
Q Consensus 205 ~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~-s~~p~--~~d---~~~i~~ia~~~--g~~li~D 276 (520)
.+.-.|..|+ .+++. +++.+|+|.+++.+++ ++|+|.+-- -.|.. .+. ++++.++.|+. ++++++|
T Consensus 123 --SL~e~Gi~Y~--~v~L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVD 196 (403)
T PF06838_consen 123 --SLKEFGIKYR--EVPLT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVD 196 (403)
T ss_dssp --STGGGT-EEE--E--B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred --ChHHhCceeE--EEeec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEe
Confidence 1222355444 44455 4689999999999997 899999873 34543 334 44555555554 7999999
Q ss_pred chhhcccccccccCCCCC-cccEEEeccCcccCC---CCceEEEeeCCCcchhhHHHhh-cccCCCCCC--CCChHHHHH
Q 010008 277 MAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAI-NNAVFPGLQ--GGPHNHTIG 349 (520)
Q Consensus 277 ~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~G---prgG~I~~~~~~~~~~~l~~~i-~~~~~p~~~--g~p~~~~ia 349 (520)
.++ -.++- ...|.. ++|++.+|+=|...| |-||+|++++ ++.++. .+..-||+. .|+.....-
T Consensus 197 NCY-GEFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~------~lVe~~a~RLTaPGiG~e~G~t~~~~R 266 (403)
T PF06838_consen 197 NCY-GEFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK------DLVERAAYRLTAPGIGKEVGATLGTNR 266 (403)
T ss_dssp -TT-TTTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH------HHHHHHHHHHS-TTTGGGSS--TTTHH
T ss_pred CCc-ceecc---ccCccccchhheeccceeCCCCCccCcCCEEechH------HHHHHHHhhhcCCccccccccCcchHH
Confidence 983 33331 224444 899999999999855 7889999998 777655 344556651 111111111
Q ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCC---eeEEEEecCCCCCHHHHHHHHh
Q 010008 350 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN---HLVLVDLRPMGIDGARVEKILD 417 (520)
Q Consensus 350 ala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~---~~~~vd~~~~g~~~~~~~~~L~ 417 (520)
.+...|=. . ...+.+.++-+...+..+++.|+++.+...+. -+..+.+. +.+.+..+|+
T Consensus 267 ~~~QGlFl--A---P~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~----~~e~l~~FC~ 328 (403)
T PF06838_consen 267 LMFQGLFL--A---PHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG----SPEKLIAFCQ 328 (403)
T ss_dssp HHHHHHHH--H---HHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S----SHHHHHHHHH
T ss_pred HHHhHHhh--c---hHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC----CHHHHHHHHH
Confidence 11111111 0 23455556666667777888999987643222 12344443 5677777775
No 289
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.59 E-value=3.6e-13 Score=139.89 Aligned_cols=244 Identities=20% Similarity=0.175 Sum_probs=156.1
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCC----ceeeecCChHHHHHHHHHhhCC--------C-----CCEEEEcCCCCCc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------P-----HDRIMGLDLPHGG 195 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~----~~~V~~~sGs~A~~~~l~all~--------p-----GD~Vl~~~~~~~g 195 (520)
..+...++|..+.+++++++|.+.+.. ...+..++||++|+.++.+.-+ . +..++..+. .+
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~--~a 150 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE--QA 150 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET--TS
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc--cc
Confidence 456788999999999999999983211 1345556677999877755411 1 233444332 23
Q ss_pred cccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc--C---CcEEEEc--CCCCCCCCCHHHHHHHHHH
Q 010008 196 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIAG--ASAYPRDFDYPRMRQIADA 268 (520)
Q Consensus 196 hls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~--~---pklIi~~--~s~~p~~~d~~~i~~ia~~ 268 (520)
|++- .+...+.|.. ++.+++| +++.+|+++|++++.+. + |-+|+++ .+..+...|+++|++||++
T Consensus 151 H~S~-----~Kaa~~lGlg--~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~ 222 (373)
T PF00282_consen 151 HYSI-----EKAARILGLG--VRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK 222 (373)
T ss_dssp -THH-----HHHHHHTTSE--EEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred ccHH-----HHhcceeeeE--EEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence 3322 2456777875 5566677 47899999999987653 2 3244444 3334448899999999999
Q ss_pred hCCEEEEechhhccccccc-ccC--CCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc-cc---------
Q 010008 269 VGALLMMDMAHISGLVAAS-VVA--DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN-NA--------- 334 (520)
Q Consensus 269 ~g~~li~D~Ah~~gli~~~-~~~--~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~-~~--------- 334 (520)
+|+|+++|+|+........ ..+ ..++.+|-++.++|||+..|-+ |++++++.. .+...+. ..
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~----~l~~~~~~~~~Yl~~~~~~ 298 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS----DLRDAFSINADYLGNDDRE 298 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG----GHHGGGEEEETCTT-S-SS
T ss_pred cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc----chHHHhccChhhhcccccc
Confidence 9999999998543222222 111 2234799999999999988877 899888851 1222110 00
Q ss_pred -------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecC
Q 010008 335 -------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 391 (520)
Q Consensus 335 -------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~ 391 (520)
...+++++-. .....+...++.....+|.++.++..+.++++.+.|.+. +++++.+
T Consensus 299 ~~~~~~~~~~tl~~SR~-~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~ 362 (373)
T PF00282_consen 299 SDESYDYGDYTLQGSRR-FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE 362 (373)
T ss_dssp S-GGGCEEEGSSSSSGH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST
T ss_pred ccccccccccccccccc-chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 0122355542 233455667777767789999999999999999999884 6888764
No 290
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.59 E-value=1.1e-15 Score=152.79 Aligned_cols=253 Identities=20% Similarity=0.229 Sum_probs=162.4
Q ss_pred cCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 010008 100 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 179 (520)
Q Consensus 100 asen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al 179 (520)
.|+| ..|+++++|.... .|.. -|++.++..++| ++++++||.+.. +.+.||+.||..+++++
T Consensus 3 ~SD~-~~~~m~~a~~~a~-----~gd~---~Yg~D~~~~~l~----~~i~~l~g~e~a-----~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAAN-----VGDD---AYGEDPTTARLE----ERIAELFGKEAA-----LFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHTT-----SB-C---CTTSSHHHHHHH----HHHHHHHTSSEE-----EEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHccc-----cCCc---ccCCChhHHHHH----HHHHHHcCCCEE-----EEeCCCChHHHHHHHHH
Confidence 3667 7799999995432 1222 277888888888 678899999863 45689999999999999
Q ss_pred CCCCCEEEEcCCCCCcccccccccccccc-ccccceEEEEEcccCCCCCCCCHHHHHHHhhh-----cCCcEEEEcCCCC
Q 010008 180 LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY 253 (520)
Q Consensus 180 l~pGD~Vl~~~~~~~ghls~g~~~~~~~v-~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~-----~~pklIi~~~s~~ 253 (520)
++|++.|++.+..| + +......+ .+.|. ++++++-+ +++.+|+++|++.+.. .+|++|.+..+++
T Consensus 65 ~~~~~~vi~~~~aH---i---~~~E~ga~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 65 LRPGESVICADTAH---I---HFDETGAIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp HHTTEEEEEETTEH---H---HHSSTTHHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred HhcCCceeccccce---e---eeeccchhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 99999999987633 2 11111122 34565 66665543 2389999999999987 3578999987776
Q ss_pred ---CCCC---CHHHHHHHHHHhCCEEEEechhhcccc-cccccCC-CCCcccEEEeccCcccCCCCceEEEeeCCCcchh
Q 010008 254 ---PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVAD-PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 325 (520)
Q Consensus 254 ---p~~~---d~~~i~~ia~~~g~~li~D~Ah~~gli-~~~~~~~-p~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~ 325 (520)
+++. ++++|+++|+++|+.|+.|+|-.+... ..+.... ...++|++++|++|.+..|-|+++++++
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~------ 209 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNK------ 209 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESH------
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEech------
Confidence 3455 466778889999999999998543322 1111111 1137999999999999889899999998
Q ss_pred hHHHh-hcc-cCCCC-C-CCCChHHHHHH----HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC
Q 010008 326 ELESA-INN-AVFPG-L-QGGPHNHTIGG----LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 391 (520)
Q Consensus 326 ~l~~~-i~~-~~~p~-~-~g~p~~~~iaa----la~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~ 391 (520)
++.++ ... ..+.+ + +.+ .+++ ...++... +.+.....+..++++.|++.|...|+.+..+
T Consensus 210 ~~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~~ 277 (290)
T PF01212_consen 210 EFIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPRP 277 (290)
T ss_dssp HHHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEETT
T ss_pred HHHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 53322 111 01110 0 111 2222 01222222 2235566777888999999998888776554
No 291
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.59 E-value=1.7e-12 Score=137.64 Aligned_cols=324 Identities=16% Similarity=0.097 Sum_probs=178.4
Q ss_pred ccceEecCC-----CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 010008 94 KSLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Liase-----n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG 168 (520)
..|++..+- ...+|.|.+|+...+.+.. .|+..++...+ .++++++.+... +. .+..+||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-------~~~~~~~~~~~----lae~l~~~~~~~-~~---v~~~~sG 113 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-------SYGAPTEAEIL----LAKEIISRVPSV-EM---VRFVNSG 113 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC-------cCCCCCHHHHH----HHHHHHHhCCcc-cE---EEEeCCH
Confidence 346665432 2568999999988876432 12212222222 335666766543 22 2346788
Q ss_pred HHHHHHHHHhh--CCCCCEEEEcCCCCCccccccccccccccccccce---------------EEEEEcccCCCCCCCCH
Q 010008 169 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDY 231 (520)
Q Consensus 169 s~A~~~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~---------------~~~v~~~~d~~~~~iD~ 231 (520)
++|+.+++... ....++|+..++.|.|+.. +. ......+.. ...+.++ ..|+
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~ 182 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHD-AL----LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDL 182 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChh-hh----hccccCcccccCCCCCCCCCcccccceEEeC------CCCH
Confidence 99999888753 2356899999887654310 00 000000000 0011111 1288
Q ss_pred HHHHHHhhh--cCCcEEEEc-CCCCCC-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc-CCCCC-cccEEEe
Q 010008 232 DMLEKTAIL--FRPKLIIAG-ASAYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTT 301 (520)
Q Consensus 232 d~le~~i~~--~~pklIi~~-~s~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~~-~aDiv~~ 301 (520)
++++++++. .++++|++. .+++++ ..+ +++|+++|+++|+++|+|++| .|+...... ...+. ..|++
T Consensus 183 ~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~-- 259 (423)
T TIGR00713 183 EALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT-- 259 (423)
T ss_pred HHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--
Confidence 999998874 256788875 455544 333 789999999999999999996 555321110 00011 24655
Q ss_pred ccCccc-CCCCceEEEeeCCCcchhhHHHhhccc--C-CCCCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHH
Q 010008 302 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRA 376 (520)
Q Consensus 302 S~hK~l-~GprgG~I~~~~~~~~~~~l~~~i~~~--~-~p~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~ 376 (520)
+++|.+ .|+|.|++++++ ++.+.+... . .....+++.....++++ +|+.+.+.++ +...+.....++.
T Consensus 260 t~sK~l~~G~pig~v~~~~------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a-~l~~~~~~~~~~~~~~~~~~~~~~ 332 (423)
T TIGR00713 260 TLGKIIGGGLPVGAFGGRR------EIMERLAPEGPVYQAGTLSGNPLAMAAGLA-TLKLLDEEGVYTELDELAKRLAEG 332 (423)
T ss_pred hhhhhhcCCCceeeeeEHH------HHHHhhCcCCCeeeccCCCCCHHHHHHHHH-HHHHHhcccHHHHHHHHHHHHHHH
Confidence 578998 568899999988 677766531 1 22233444444444443 5776554333 2333333333334
Q ss_pred HHHHHHHCCCEEecCCCCCeeEEEEecCCC---------CCH---HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEcc
Q 010008 377 LASRLVELGYKLVSGGSDNHLVLVDLRPMG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS 444 (520)
Q Consensus 377 l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g---------~~~---~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~ 444 (520)
|.+.+.+.++.....+. ..++.+.+.... .+. ..+.+.|.+.||.+... ..+.+|++.
T Consensus 333 l~~~~~~~~~~~~v~~~-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~~~l~~ 402 (423)
T TIGR00713 333 LSEVLEDTGIPHTVNRV-GSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPS---------QFEACFLSA 402 (423)
T ss_pred HHHHHHhcCCCeEEEee-ccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecC---------CccceeeEC
Confidence 44444555654422111 223333232111 122 24556677799998431 112478864
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHH
Q 010008 445 PAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 445 ~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+ ++++|++++.+.+.+++.
T Consensus 403 ~------~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 403 A------HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred C------CCHHHHHHHHHHHHHHHh
Confidence 3 458999999999988775
No 292
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=1.2e-12 Score=136.50 Aligned_cols=307 Identities=14% Similarity=0.115 Sum_probs=173.4
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 183 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG 183 (520)
.|.|++|+...+...+ +++. .++ ..++ +.+++.+...++. ..+...||++||..++... ...+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~~~------~~~~----~~la~~l~~~~~~--~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-LYL------NSLQ----EEVAQKLIGDKDY--LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-ccC------CHHH----HHHHHHHhcCcCC--EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 6778888887775322 2222 111 1223 2233333222221 1244688999999887765 3456
Q ss_pred CEEEEcCCCCCccccccccccccccccccce-----EEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 010008 184 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 256 (520)
Q Consensus 184 D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-----~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~ 256 (520)
++|+..+..+.|....+ ....+.. +.. .++........|++++++.+.+ ++.+|++...++++ .
T Consensus 111 ~~vv~~~~~yHg~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS-------MSATGQDKIKDGFGD-GVPHFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVL 181 (375)
T ss_pred CeEEEECCCcCcccHHH-------HhccCCcccCCCCCC-CCCCeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCc
Confidence 78888876643321111 1111110 000 0000000012488999988865 67788887544433 2
Q ss_pred C----CHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC-cccEEEeccCcccC-CCCceEEEeeCCCcchhhHH
Q 010008 257 F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 257 ~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~-~aDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~l~ 328 (520)
. .++++.++|+++|+++++|++|. |+...+.... -.. ..|++ |++|.|. |.+.|++++++ ++.
T Consensus 182 ~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~------~~~ 252 (375)
T PRK04260 182 PADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS------SLG 252 (375)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH------HHH
Confidence 2 28999999999999999999974 6543332111 011 24655 6789995 66889999987 666
Q ss_pred HhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CC-CEEecCCCCCeeEEEEec
Q 010008 329 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLR 403 (520)
Q Consensus 329 ~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G-~~v~~~gt~~~~~~vd~~ 403 (520)
+.+.........+++... .++....++....+ ++.+++.++.+.+.+.|.+ .+ +..+.+ ...++++++.
T Consensus 253 ~~~~~~~~~~t~~~~~~~-~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~~ 326 (375)
T PRK04260 253 GAFGYGSHGSTFGGNKLS-MAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGIETT 326 (375)
T ss_pred hhcCCCCCCCCCCcCHHH-HHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEEEec
Confidence 666543222233333333 33333456554332 3445555555555555544 32 222222 2345566653
Q ss_pred CCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 404 PMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 404 ~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
.+...+.+.|.+.||.+. |. ..+.+|++++.. ++++|++++.+.|+++
T Consensus 327 ---~~~~~~~~~l~~~Gi~v~----~~-----~~~~lR~~~~~~----~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 327 ---ADLSQLVEAARDKGLIVL----TA-----GTNVIRLLPPLT----LTKEEIEQGIAILSEV 374 (375)
T ss_pred ---CcHHHHHHHHHhCCCEEe----cC-----CCCEEEEcCCCc----cCHHHHHHHHHHHHHh
Confidence 245678888989999983 32 246899987643 5589999999998765
No 293
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.58 E-value=8.5e-13 Score=150.45 Aligned_cols=273 Identities=17% Similarity=0.124 Sum_probs=176.5
Q ss_pred HHHHHHHHcCCCCCCCceeeecCCh-HHHHHHHHHhh-CCCC--CEEEEcCCCCCccccccccccccccccccceEEEEE
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 219 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sG-s~A~~~~l~al-l~pG--D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~ 219 (520)
.+..++++.|++.+ |+..+.+ |.+..++++++ +++| |+|++.+..|+....... + .....| ++++.
T Consensus 126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~-t---~a~~~G--~ev~~ 195 (954)
T PRK05367 126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR-T---RAEPLG--IEVVV 195 (954)
T ss_pred HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH-H---HHHhCC--CEEEE
Confidence 56789999999975 4444444 45666677776 5564 999999988765532110 0 112234 46666
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc
Q 010008 220 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 297 (520)
Q Consensus 220 ~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD 297 (520)
++.+. |.+ .+ ++..+++..|++.+ ..|+++|+++||++|+++++|+.+.+..+. ..|-+ ++|
T Consensus 196 ~~~~~-----d~~------~~-~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~GaD 259 (954)
T PRK05367 196 GDAAK-----ALD------HD-DVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGAD 259 (954)
T ss_pred ecCcc-----CCC------cc-cEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCCC
Confidence 55432 111 11 34455565666554 779999999999999999999877444331 22333 899
Q ss_pred EEEeccCcc-----cCCCCceEEEeeCCCcchhhHHHhhcccC------------C-----------CCCCCCChHHH--
Q 010008 298 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNAV------------F-----------PGLQGGPHNHT-- 347 (520)
Q Consensus 298 iv~~S~hK~-----l~GprgG~I~~~~~~~~~~~l~~~i~~~~------------~-----------p~~~g~p~~~~-- 347 (520)
|+++++||| ++||..|++++++ ++.+++...+ + ..-.++.+...
T Consensus 260 i~vgs~qkfg~P~g~GGP~aGflavr~------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~q 333 (954)
T PRK05367 260 IAVGSAQRFGVPMGFGGPHAAYFAVRD------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQ 333 (954)
T ss_pred EEEeeCcccCCCCCCCCCCEEEEEECH------HHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHH
Confidence 999999999 6788779999987 3333321000 0 00123323221
Q ss_pred -HHHHHHH--HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEc
Q 010008 348 -IGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 424 (520)
Q Consensus 348 -iaala~a--l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~ 424 (520)
+.++.++ +..+...+.++..+++..++.++++.|.+.|+++..+.. ...+.+++ +.+..++.+.|.++||.+.
T Consensus 334 aL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~-f~~~~~~~---~~~~~~i~~~l~~~gi~~~ 409 (954)
T PRK05367 334 VLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSF-FDTLTVEV---GGDAAAVLARALAAGINLR 409 (954)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCC-CCeEEEeC---CCCHHHHHHHHHHCCceec
Confidence 2222212 233445567888899999999999999888998765421 12233443 2367889999999999984
Q ss_pred CCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 425 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 425 ~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
.. ..+.+|++....+| ++|++.+++.+.
T Consensus 410 ~~---------~~~~l~is~~e~~t----~~did~l~~~l~ 437 (954)
T PRK05367 410 RV---------DDDHVGISLDETTT----REDLAALLAVFG 437 (954)
T ss_pred cc---------cCCEEEEEecccCC----HHHHHHHHHHHc
Confidence 31 24579999988776 899999999997
No 294
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=5.4e-14 Score=142.93 Aligned_cols=214 Identities=20% Similarity=0.151 Sum_probs=147.4
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCCCCCcccccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 212 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g 212 (520)
|++..+.+| ..++++-|+.. .+...||..|+..++..|+++||+|+..+..|+|....-. +-....|
T Consensus 75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~----~~~~~~g 141 (409)
T KOG0053|consen 75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILR----KFLPKFG 141 (409)
T ss_pred CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHH----HHHHHhC
Confidence 577788888 57888999986 3556899999999999999999999999988888642111 0011122
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 290 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~ 290 (520)
. +..++++ -|++++++.+++ ++++|++.+|.||. ..|+++++++|+++|+++++|.+-..+ +..
T Consensus 142 i--e~~~vd~------~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~ 207 (409)
T KOG0053|consen 142 G--EGDFVDV------DDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQ 207 (409)
T ss_pred c--eeeeech------hhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----ccc
Confidence 2 3333222 256778888888 89999999999998 789999999999999999999973322 334
Q ss_pred CCCC-cccEEEeccCcccCCCC---ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHH
Q 010008 291 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 366 (520)
Q Consensus 291 ~p~~-~aDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~ 366 (520)
.|++ |||||+.|.+|++.|-. +|.++.+.+ ++.+++..... .+.+.++ .+.+. ..++.+. .+.-+
T Consensus 208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~~~~-~lg~~~~--p~~~~-ll~Rglk--tl~lR 276 (409)
T KOG0053|consen 208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKFLQE-DLGWCED--PFDLF-LLSRGLK--TLHLR 276 (409)
T ss_pred ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHHHHH-HhcCCCC--HHHHH-HHhcCcc--hhhhh
Confidence 5666 69999999999998854 388888743 67776654321 1111111 12111 1111111 12335
Q ss_pred HHHHHHHHHHHHHHHHHC
Q 010008 367 QNKVVSNCRALASRLVEL 384 (520)
Q Consensus 367 ~~~i~~na~~l~~~L~~~ 384 (520)
+++..+|+..+++.|.+.
T Consensus 277 i~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 277 INKHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHHHhhhC
Confidence 677778888889998773
No 295
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=4.3e-13 Score=133.83 Aligned_cols=324 Identities=18% Similarity=0.222 Sum_probs=201.8
Q ss_pred ccceEec-------CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCC-----CCCce
Q 010008 94 KSLELIA-------SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-----NKWGV 161 (520)
Q Consensus 94 ~~i~Lia-------sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~-----~~~~~ 161 (520)
+.|||.. +..++-+.|.+|-...+.+..+..| -+-+..+.+.+.+ .+-+||.++ +.+ +
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Y------l~i~G~~~f~~~~---~~llFG~d~~~l~~~Rv-~ 96 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNY------LPIEGLPEFLEAV---QKLLFGADSPALAEDRV-A 96 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccccccc------CCcCCcHHHHHHH---HHHhcCCCcHHHHhhhH-h
Confidence 5688864 2235668899988777665544333 3333334444322 234789653 233 5
Q ss_pred eeecCChHHHHHHHHH--hhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHHh
Q 010008 162 NVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTA 238 (520)
Q Consensus 162 ~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~-d~~~~~iD~d~le~~i 238 (520)
.||..+||.|+..+.. +-..|..+|-+++|+++.|.. .....| +++..|++ |.++..+|++.+.+.+
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aG--l~v~~Y~Yyd~~~~~~df~~mla~L 166 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAG--LEVETYPYYDAETKGLDFDGMLADL 166 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcC--CceeeeeccccccccccHHHHHHHH
Confidence 7999999988876543 335677889999999887732 223344 45555554 6567789999987777
Q ss_pred hhcCC-cEEEEc-CCCCCCC-----CCHHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-----cc-cEEEecc
Q 010008 239 ILFRP-KLIIAG-ASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-----YC-DVVTTTT 303 (520)
Q Consensus 239 ~~~~p-klIi~~-~s~~p~~-----~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-----~a-Div~~S~ 303 (520)
+.... .+|++. ..+|||- ..|++|.++.++.|.+-+.|.| |-|+-.+ ... ..+. +. =+|++|+
T Consensus 167 ~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~G-leeDa~~lR~~a~~~~~~lva~S~ 244 (396)
T COG1448 167 KTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFADG-LEEDAYALRLFAEVGPELLVASSF 244 (396)
T ss_pred HhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhccc-hHHHHHHHHHHHHhCCcEEEEehh
Confidence 65333 355554 4578872 3488999999999999999998 5554322 111 0111 12 3788999
Q ss_pred Cccc--CCCCceE-EEeeCCCcchhhHHHhhcc---cCCCCCCCCChHHHHHHHHHH-----HHHhcCchhHHHHHHHHH
Q 010008 304 HKSL--RGPRGGM-IFFKKDPVLGVELESAINN---AVFPGLQGGPHNHTIGGLAVC-----LKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 304 hK~l--~GprgG~-I~~~~~~~~~~~l~~~i~~---~~~p~~~g~p~~~~iaala~a-----l~~~~~~~~~~~~~~i~~ 372 (520)
+|.| .|-|.|. .+...+. +...++.. ......+++|..|..+-.+.- |+..-..+..++++++.+
T Consensus 245 SKnfgLYgERVGa~~vva~~~----~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 245 SKNFGLYGERVGALSVVAEDA----EEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred hhhhhhhhhccceeEEEeCCH----HHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9986 6788754 3443321 22222211 112234556665554433322 322222345778899999
Q ss_pred HHHHHHHHHHHCC----CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCcc
Q 010008 373 NCRALASRLVELG----YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMT 448 (520)
Q Consensus 373 na~~l~~~L~~~G----~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~t 448 (520)
.+..|.+.|++.| |..+.. .+.++. . .|++.+++.++.++.||.+-. +| ||++.
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFs--y--~Gls~~QV~rLree~~IY~v~------------sG-Ri~va--- 378 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIIS--QRGMFS--Y--TGLSPEQVDRLREEFGIYLVA------------SG-RINVA--- 378 (396)
T ss_pred HHHHHHHHHHhhCCCcccchHhh--cCceee--c--CCCCHHHHHHHHHhccEEEec------------CC-eeeec---
Confidence 9999999998833 444432 223322 2 377899999999999999832 22 88876
Q ss_pred ccCCCHHHHHHHHHHHHHH
Q 010008 449 TRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 449 t~g~~~~d~~~la~~i~~~ 467 (520)
|+++..++++++.|.++
T Consensus 379 --Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 379 --GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred --cCChhhHHHHHHHHHhh
Confidence 45579999999999875
No 296
>PLN02624 ornithine-delta-aminotransferase
Probab=99.53 E-value=1e-11 Score=133.30 Aligned_cols=317 Identities=17% Similarity=0.151 Sum_probs=175.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC---
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 181 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~--- 181 (520)
-.|.|.+|+...+.+ +..+.+ +++ ++...++ .++++++++.+. .+..+||++|+..++.....
T Consensus 92 ~~p~v~~ai~~ql~~-~~~~~~--~~~--~~~~~~l----a~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~ 157 (474)
T PLN02624 92 CHPKIIKALTEQAEK-LTLSSR--AFY--NDKFPEF----AEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGY 157 (474)
T ss_pred CCHHHHHHHHHHHHh-cCCccc--ccC--CHHHHHH----HHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHH
Confidence 379999999888764 332221 222 2222222 356778887643 24468999999988863221
Q ss_pred -----C-CC-EEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCCC---CCCCHHHHHHHhhhc--CCcEEEE
Q 010008 182 -----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIA 248 (520)
Q Consensus 182 -----p-GD-~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~-~~d~~~---~~iD~d~le~~i~~~--~pklIi~ 248 (520)
+ +. +|+...-.| ||.... .+++.+.......+ +..+.. ...|++.+++.++.. +..+|++
T Consensus 158 ~~~g~~~~~~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 158 EKKGIPKNEAIIVSCCGCF-----HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hhcCCCCCCcEEEEECCCc-----CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 33 455554322 332111 11111110000000 000000 012788899888642 4567888
Q ss_pred cCCCCCC--CCC----HHHHHHHHHHhCCEEEEechhhcccccccc-cCCC-CC-cccEEEeccCcccCC--CCceEEEe
Q 010008 249 GASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-FK-YCDVVTTTTHKSLRG--PRGGMIFF 317 (520)
Q Consensus 249 ~~s~~p~--~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p-~~-~aDiv~~S~hK~l~G--prgG~I~~ 317 (520)
....+++ ..+ +++|+++|++||+++|+|++|. |+...|. .... .. ..|++++ .|.+.| ++.|+++.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeee
Confidence 7655543 444 9999999999999999999985 5432221 1000 01 3577776 499854 57788888
Q ss_pred eCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC--CE----EecC
Q 010008 318 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK----LVSG 391 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G--~~----v~~~ 391 (520)
++ ++...+.........+++.....+++ ++|+.+.+.+ ..++..+..+.+.+.|.+.. ++ .+.+
T Consensus 308 ~~------~i~~~~~~~~~~~T~~g~pl~~aaa~-aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg 377 (474)
T PLN02624 308 DK------DVMLCIKPGEHGSTFGGNPLASAVAM-AALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEVRG 377 (474)
T ss_pred cH------HHHhHhccCCcCCCCCCCHHHHHHHH-HHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 77 56555543322223344444444443 4566654433 23444455566666665521 21 1222
Q ss_pred CCCCeeEEEEecCCC---CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMG---IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 392 gt~~~~~~vd~~~~g---~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
...++.+.+.... ....++.+.|.+.||.+. |+ ....|||+.+.. ++++|++++.+.|++++
T Consensus 378 --~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~----p~-----~~~~lR~~p~l~----~t~e~id~~l~~L~~~l 442 (474)
T PLN02624 378 --RGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAK----PT-----HDTIIRLAPPLS----ISEDELQECSKALSDVL 442 (474)
T ss_pred --eEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEe----cC-----CCCEEEEECCcc----CCHHHHHHHHHHHHHHH
Confidence 1223333343211 123456777889999983 32 246799986533 56899999999999887
Q ss_pred HH
Q 010008 469 EI 470 (520)
Q Consensus 469 ~~ 470 (520)
..
T Consensus 443 ~~ 444 (474)
T PLN02624 443 EH 444 (474)
T ss_pred HH
Confidence 54
No 297
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=1e-11 Score=126.05 Aligned_cols=330 Identities=19% Similarity=0.209 Sum_probs=195.0
Q ss_pred ccceEecCC---C--CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 010008 94 KSLELIASE---N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Liase---n--~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG 168 (520)
..|++.++- | --.|.+.+|+...+..-+. .+.-||. +..++++ +++.++.+ ..+. .+..+||
T Consensus 43 ~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~~-----~~~~~la-~~L~~~s~-~~d~---vff~NSG 109 (404)
T COG4992 43 EYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFYN-----EPQAELA-EKLVELSP-FADR---VFFCNSG 109 (404)
T ss_pred EeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---cccccCC-----hHHHHHH-HHHHhhCc-cccE---EEEcCCc
Confidence 457776533 2 2479999998876654331 1111222 2233333 56777776 3332 3456899
Q ss_pred HHHHHHHHHhh---CC-CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhh
Q 010008 169 SPANFEVYTAI---LK-PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAI 239 (520)
Q Consensus 169 s~A~~~~l~al---l~-pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~---~~iD~d~le~~i~ 239 (520)
++||.+++... .. |+ -+|+...-.+.|+ |.+ .+++.+.. |.--+.|+-+.- -.-|+++++++++
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGR-T~g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~ 182 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGR-TLG------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID 182 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCc-cce------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc
Confidence 99999988653 22 22 3788777665443 111 23344432 111111222211 1348899999999
Q ss_pred hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccEEEeccCcccCC-
Q 010008 240 LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG- 309 (520)
Q Consensus 240 ~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDiv~~S~hK~l~G- 309 (520)
+ ++-+||+..- .-++ ..-+++++++|++||+++|.|+.|. |+--.|. +. .-.. ..||++.. |.|.|
T Consensus 183 ~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~tla--K~LgGG 258 (404)
T COG4992 183 E-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILTLA--KALGGG 258 (404)
T ss_pred c-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEEee--ccccCC
Confidence 9 8999988632 1222 2237899999999999999999874 4322221 00 0001 25888877 99954
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCE
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK 387 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~ 387 (520)
-..|.++.++ ++.+.+....-..+.||......++ .++|+.+.++++ .+++.+..++|.+.|++. .++
T Consensus 259 ~PigA~la~~------~~~~~~~~G~HgSTfGGNpLacAv~-~a~l~~l~~e~l---l~~v~~~g~~~~~~L~~l~~~~~ 328 (404)
T COG4992 259 FPIGAMLATE------EIASAFTPGDHGSTFGGNPLACAVA-LAVLEVLLEEGL---LENVREKGEYLLQRLRELKRRYP 328 (404)
T ss_pred ccceeeEEch------hhhhcCCCCcccCCCCcCHHHHHHH-HHHHHHHcchhH---HHHHHHHHHHHHHHHHHHhhcCC
Confidence 4456666665 5555554443333455533333333 346777766554 566666678888888773 444
Q ss_pred EecCCCCCe-eEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 388 LVSGGSDNH-LVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 388 v~~~gt~~~-~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
++..-.... ++=+.+... .....+.+.|.+.|+.+... .+..||+..| ++ ++++|+++..+.+.+
T Consensus 329 ~v~~vRG~GLmiGiel~~~-~~a~~~~~~~~~~gvL~~~a---------~~~ViR~~Pp-L~---i~~eei~~~~~~l~~ 394 (404)
T COG4992 329 LVKEVRGRGLMIGIELKEP-YRARDIVRALREEGVLVLPA---------GPNVIRFLPP-LV---ITEEEIDEALDALER 394 (404)
T ss_pred ceeeeecceeEEEEEecCc-ccHHHHHHHHHHCCeEEecC---------CCCeEEecCC-cc---CCHHHHHHHHHHHHH
Confidence 444311122 333445432 13577888999999999532 3458999655 44 679999999999999
Q ss_pred HHHHH
Q 010008 467 GVEIT 471 (520)
Q Consensus 467 ~l~~~ 471 (520)
++...
T Consensus 395 ~l~~~ 399 (404)
T COG4992 395 ALAAA 399 (404)
T ss_pred HHHHh
Confidence 98754
No 298
>PLN00144 acetylornithine transaminase
Probab=99.51 E-value=3.5e-11 Score=125.79 Aligned_cols=316 Identities=17% Similarity=0.144 Sum_probs=175.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l 180 (520)
.-.|.|.+|+...+.... +.+..|+ ++. .+ ++ .+++.+..+.+. .....|||+|+.+++... .
T Consensus 31 h~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~-~l-a~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~ 96 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLA---HVSNVYH--TIP--QV-EL-AKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQ 96 (382)
T ss_pred CCCHHHHHHHHHHHHhcC---Ccccccc--CHH--HH-HH-HHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHH
Confidence 346888888887775421 1111111 221 11 22 355666655432 244589999999887643 1
Q ss_pred C------C------CCEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhhcCCc
Q 010008 181 K------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPK 244 (520)
Q Consensus 181 ~------p------GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~---~~iD~d~le~~i~~~~pk 244 (520)
. + ..+|+...-.|.|. ... .....+.. +.....+..+.. ...|++.+++.+...+++
T Consensus 97 ~~~~~~~~~~~~~~r~~ii~~~~~yHG~-----t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 97 RVRAPDKKDPAASSATEFVSFSNSFHGR-----TLG--ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred hccCCCCccccccccceEEEECCCcccc-----cHH--HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 1 24688877654332 110 01111110 000000110000 013789999888655788
Q ss_pred EEEEcCCCCCC----CCC--HHHHHHHHHHhCCEEEEechhhccccccccc-CC-CCC-cccEEEeccCccc-CCCCceE
Q 010008 245 LIIAGASAYPR----DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGM 314 (520)
Q Consensus 245 lIi~~~s~~p~----~~d--~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~-p~~-~aDiv~~S~hK~l-~GprgG~ 314 (520)
+|++....+++ ... +++|+++|++||+++|.|++|. |+-..+.. +. ... ..|+++ ++|.| +|-+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi~t--~sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDIMT--LAKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCEEE--ecccccCCcceEE
Confidence 88887544443 223 8899999999999999999964 54333321 11 011 357555 45998 4677899
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEec--
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVS-- 390 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~-- 390 (520)
+++++ ++.+.+.........+++.... ++..+.|+.+.+.++. +++.+..+.+.+.|.+ ...+.+.
T Consensus 247 v~~~~------~~~~~~~~~~~~~T~~~~pl~~-aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~v 316 (382)
T PLN00144 247 VLVTE------KVASAINPGDHGSTFAGGPLVC-NAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEV 316 (382)
T ss_pred EEEcH------HHHhccCCCCCCCCCCCCHHHH-HHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceee
Confidence 99987 6776665433333344434433 3333456766554443 3444444555554443 1221111
Q ss_pred CCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 391 GGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 391 ~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
.+ ...+.++.+. .+...+.+.+.+.||.+. |+. ....||++.+.. ++++|+++..+.|.+++.
T Consensus 317 rg-~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~----~~~----~~~~lrl~p~~~----~~~~~i~~~~~~l~~~l~ 379 (382)
T PLN00144 317 RG-VGLLVGIQLD---VPAGPLVDACRDSGLLVL----TAG----KGDVVRLVPPLV----ISEAELEQAVEILADCLP 379 (382)
T ss_pred ec-CceEEEEEec---CccHHHHHHHHHCCeEEe----ecC----CCCEEEEeCCCc----cCHHHHHHHHHHHHHHHH
Confidence 12 2355666662 234667788889999984 321 136899987642 348999999999998885
No 299
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.5e-12 Score=131.65 Aligned_cols=322 Identities=19% Similarity=0.178 Sum_probs=196.8
Q ss_pred CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 179 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~-~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al 179 (520)
+..+..+.+.+++.. |....-+.|...|+ +...++| +..++++|.+.+ +...-|-..|...+.+|
T Consensus 152 ~~g~ca~~~~~~~~k-----ygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l 217 (519)
T KOG1357|consen 152 SVGPCAEASLKSFDK-----YGLSRCSSRHEAGTTEEHKELE----ELVARFLGVEDA-----IVFSMGFATNSMNIPSL 217 (519)
T ss_pred cCCcCChHHHHHHHH-----hcccccccchhcccHHHHHHHH----HHHHHhcCCcce-----EEEeccccccccCccee
Confidence 334556777777753 33333333333333 3345666 667889999874 33456777888888999
Q ss_pred CCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhh---------cCC--cEEEE
Q 010008 180 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIA 248 (520)
Q Consensus 180 l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~---------~~p--klIi~ 248 (520)
+.||.-|+.-.+.|.+... .+..+|+..++.. .+ |+.+||+.+++ ++| |++++
T Consensus 218 ~~~gsLIiSDelNHaSi~~--------GaRLSgAtiRVfk--HN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~ii 281 (519)
T KOG1357|consen 218 LGKGSLIISDELNHASLIT--------GARLSGATTRVFR--HN------DMQGLERLLRDAIVYGQPKTHRPWKKILIC 281 (519)
T ss_pred ecCCcceeeccccchheec--------cccccCceEEEEe--cC------CHHHHHHHHHHHHhcCCCCcCCcchheeee
Confidence 9999999998888765432 2356676444333 22 44555555443 123 45555
Q ss_pred c---CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc-c--c--cCCC-CCcccEEEeccCcccCCCCceEEEeeC
Q 010008 249 G---ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--V--VADP-FKYCDVVTTTTHKSLRGPRGGMIFFKK 319 (520)
Q Consensus 249 ~---~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~-~--~--~~~p-~~~aDiv~~S~hK~l~GprgG~I~~~~ 319 (520)
. ++.-+...++.++.++++++.++|+.|+||+.|.... | + +..+ ...+||+.+++.|++ |--||+|.+++
T Consensus 282 vegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk 360 (519)
T KOG1357|consen 282 VEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK 360 (519)
T ss_pred eccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH
Confidence 4 3455568899999999999999999999999988732 2 1 1111 125789999999997 45689999998
Q ss_pred CCcchhhHHHhhcccCCCCCCCCChHHHHHHH-HHHHHHhcC----chhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCC
Q 010008 320 DPVLGVELESAINNAVFPGLQGGPHNHTIGGL-AVCLKHAQS----PEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 394 (520)
Q Consensus 320 ~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaal-a~al~~~~~----~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~ 394 (520)
++.+.+...--....++....-++.. -.+++.+.. ...++..+++.+|+.++...|+..||-+... .|
T Consensus 361 ------~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~-~d 433 (519)
T KOG1357|consen 361 ------ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGN-ND 433 (519)
T ss_pred ------HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecC-CC
Confidence 66665543221112222221122221 224554442 2247788999999999999999888887654 34
Q ss_pred CeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 395 ~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
+..+.+-+-....- ..+.+.|.+.+|.+-....|- .|...+..|++..+-. +.++++++.+.+.++
T Consensus 434 SpVvplll~~~~k~-~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~h----t~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 434 SPVVPLLLYGPAKI-VAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSASH----TKEDLDRALEVIDRV 499 (519)
T ss_pred CCcceeeecCcccc-cHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhcccc----cHHHHHHHHHHHhhh
Confidence 43322211111111 344555656666554333342 2455677898776543 478888888777664
No 300
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=3.1e-11 Score=126.73 Aligned_cols=313 Identities=16% Similarity=0.135 Sum_probs=171.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
-.|.|.+++...+.+ ...+++ .++ .+.+....+++.+..+.+. .+..+||++||.+++....
T Consensus 53 ~~p~v~~a~~~q~~~-~~~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~ 118 (395)
T PRK03715 53 CNPGMVEALAAQAEK-LINPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGR 118 (395)
T ss_pred CCHHHHHHHHHHHHh-cccccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 368888888776643 222221 122 1223223355555544332 3456899999999887653
Q ss_pred --CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 010008 181 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA- 252 (520)
Q Consensus 181 --~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~---~~~iD~d~le~~i~~~~pklIi~~~s~- 252 (520)
++| ++|+..+..|. |.... .++..+.. +.....+..+. ....|++++++.+.+ ++.+|++....
T Consensus 119 ~~~~~r~~ii~~~~~yH-----G~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 119 KHKNGAYEIITFDHSFH-----GRTLA--TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred ccCCCCcEEEEECCCcC-----CChHH--HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 234 57887775442 22110 12222211 01001111100 013578999988875 67888887332
Q ss_pred CCC-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCC-CCceEEEeeCCCcc
Q 010008 253 YPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL 323 (520)
Q Consensus 253 ~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~~~~ 323 (520)
..+ ..+ +++++++|+++|+++|+|++|. |+-..|.. . .-+. ..|+++++ |.|.| -..|.+++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~---- 263 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKA---- 263 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeeeh--hhhhCCcceEEEEEcc----
Confidence 222 334 8999999999999999999976 54222210 0 0011 36887665 99965 3356777777
Q ss_pred hhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC----CCEEecCCCCCeeEE
Q 010008 324 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVL 399 (520)
Q Consensus 324 ~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~----G~~v~~~gt~~~~~~ 399 (520)
++.. +.......+.++... ..++...+|+.+.++ +..+++.++.++|.+.|++. ++.-+. | ...+.-
T Consensus 264 --~i~~-~~~~~~~~T~~g~pl-~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G-~Glm~~ 334 (395)
T PRK03715 264 --EVAV-FEAGDQGGTYNGNPL-MTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGER-G-EGLLRA 334 (395)
T ss_pred --cccc-ccCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-c-ceeEEE
Confidence 3431 111111222333333 333333356666443 34566777777888877652 433222 2 234444
Q ss_pred EEecCCCCCHHHHHHHHhhc---CeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 400 VDLRPMGIDGARVEKILDMA---SITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 400 vd~~~~g~~~~~~~~~L~~~---gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.+... ....+.+.+.+. ||.+... .+..||+..+.. ++++|++++.+.|+++++.
T Consensus 335 i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~---------~~~~lR~~p~l~----~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 335 LLLGKD--IGPQIVEKARDMQPDGLLLNAP---------RPNLLRFMPALN----VTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred EEecCc--hHHHHHHHHHhccCCCEEEeec---------CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHHh
Confidence 555321 234454545455 9998531 135799976643 5699999999999988863
No 301
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.45 E-value=2.9e-11 Score=122.00 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=174.2
Q ss_pred CCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHH
Q 010008 156 ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 234 (520)
Q Consensus 156 ~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~l 234 (520)
...| +|..|+|. .+++.+++.++++||.|++-..++.+-++ .+...|. .+++++.| ...+|+|.|
T Consensus 122 ~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~~a~gv--~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SMEALGV--KIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hccccCc--eEEecccc--CCCCCHHHH
Confidence 3456 57778998 99999999999999999998876654432 3344553 77777665 457999999
Q ss_pred HHHhhhc--------CCcEEEEc-CCCCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccc--------------
Q 010008 235 EKTAILF--------RPKLIIAG-ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAA-------------- 286 (520)
Q Consensus 235 e~~i~~~--------~pklIi~~-~s~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~-------------- 286 (520)
++....- +|+++..- .-.||+ ... -++|.+||++|+.++|.|.-++.-....
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~ 267 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSS 267 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccH
Confidence 9987531 36777654 345665 333 4589999999999999998755322210
Q ss_pred -----cccCCCCC----cccEEEeccCccc-CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHH
Q 010008 287 -----SVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 356 (520)
Q Consensus 287 -----~~~~~p~~----~aDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~ 356 (520)
.+.++.+. |--|-.-||+|-+ +|.|-|||.+++ -+.+++-...--.+++ |+.....-+..-|+
T Consensus 268 ~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~------~~l~ril~~ae~~t~~-pSg~sq~iv~a~l~ 340 (472)
T KOG0634|consen 268 SMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS------LFLKRILDLAEVATSG-PSGFSQGIVYAMLK 340 (472)
T ss_pred HHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH------HHHHHHhhhcceeecC-cccccHHHHHHHHH
Confidence 00111111 1114567999987 788999999998 4555543322112222 32221111222344
Q ss_pred HhcCchh----HHHHHHHHHHHHHHHHHHHH---CC-CEEecCCCCCeeEEEEec------CCCCC-H-HHHHHHHhhcC
Q 010008 357 HAQSPEF----KVYQNKVVSNCRALASRLVE---LG-YKLVSGGSDNHLVLVDLR------PMGID-G-ARVEKILDMAS 420 (520)
Q Consensus 357 ~~~~~~~----~~~~~~i~~na~~l~~~L~~---~G-~~v~~~gt~~~~~~vd~~------~~g~~-~-~~~~~~L~~~g 420 (520)
...+++| .+.+..+..++.++..+|.+ .+ +.+..+ ....+.|+.+. +.+++ . +.+...+.+.|
T Consensus 341 ~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P-~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~g 419 (472)
T KOG0634|consen 341 RWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPP-KAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNG 419 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecC-CcceEEEEEecccccccccchHHHHHHHHHHHHHCC
Confidence 4444443 33344445556666777766 24 455444 44567787763 12333 1 23555667899
Q ss_pred eEEcCCCCCCCC------CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 421 ITLNKNSVPGDK------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 421 I~v~~~~~Pg~~------~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
|.+ ++|.. ....+-.+|++.... ..+++++-.+.+..+++..
T Consensus 420 V~~----v~G~~F~v~p~~s~~kiffRls~a~a-----~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 420 VKL----VCGSWFMVDPESSWSKIFFRLSIAFA-----EPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred eEE----ecCceeEEcCccCCCcceEEEEeecC-----CHHHHHHHHHHHHHHHHHH
Confidence 988 44432 111223799986543 3678888888888877753
No 302
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.44 E-value=1.8e-10 Score=122.28 Aligned_cols=330 Identities=15% Similarity=0.044 Sum_probs=171.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 182 (520)
-+|.|.+++...+.+. ...+.. .+ +++ ..+ +++ +++.+..+.+... -.+..+||++|+..++... ...
T Consensus 58 ~~~~i~~a~~~~~~~~-~~~~~~--~~-~~~--~~~-~la-~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKKL-SHTCFQ--VL-AYE--PYL-ELC-EKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhhC-CCcccc--cc-CCH--HHH-HHH-HHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 4788888888777542 111110 01 111 122 233 5666766643311 2356789999888766543 223
Q ss_pred CCEEEEcCCCCCccccccccccccc-c-cccc-----ceEEEEEcccCCCCCCC--CHHHHHHHhh----hcCCcEEEEc
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRR-V-SGTS-----IYFESMPYRLDESTGLV--DYDMLEKTAI----LFRPKLIIAG 249 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~-v-~~~g-----~~~~~v~~~~d~~~~~i--D~d~le~~i~----~~~pklIi~~ 249 (520)
..+|+..++.|.|... +....... . ...+ ..+..++++.+..+... +++++++++. ..+..+|++.
T Consensus 128 r~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~E 206 (425)
T PRK08088 128 RSGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIE 206 (425)
T ss_pred CCeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 3566766776544321 10000000 0 0000 00111223322111111 1456787775 2245677775
Q ss_pred C-CCCCC-CC----CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--cccEEEeccCccc-CCCCceEEEeeCC
Q 010008 250 A-SAYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKKD 320 (520)
Q Consensus 250 ~-s~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--~aDiv~~S~hK~l-~GprgG~I~~~~~ 320 (520)
. .++++ .. -+++|.++|+++|+++|+|++|. |+...+.. ..+. +.+.-+.|++|++ +|.|.|++++++
T Consensus 207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~- 283 (425)
T PRK08088 207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRA- 283 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecH-
Confidence 3 23333 22 38899999999999999999965 54322211 1111 1222246778998 567889999987
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CCC-EEecCCCCC
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY-KLVSGGSDN 395 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G~-~v~~~gt~~ 395 (520)
++.+.+.........+++.. ..++....|+...... ..+++.+..+.+.+.|.+ .+. ..+.+ . .
T Consensus 284 -----~~~~~~~~~~~~~t~~~~~~-~~~a~~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g-~-G 352 (425)
T PRK08088 284 -----EVMDAIAPGGLGGTYAGNPI-ACAAALAVLKVFEQEN---LLQKANALGEKLKDGLLAIAEKHPEIGDVRG-L-G 352 (425)
T ss_pred -----HHHhhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEec-c-c
Confidence 67776655443333444333 3333334566543333 333333344444444432 222 12222 2 3
Q ss_pred eeEEEEecCC-------CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPM-------GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 396 ~~~~vd~~~~-------g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.++|+.+... ......+.+.|.+.||.+. |+.. .+..||++.+.. .+++|+++..+.+.+++
T Consensus 353 ~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~----~~~~---~~~~iRl~~~~~----~t~~ei~~~i~~l~~~l 421 (425)
T PRK08088 353 AMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILL----SCGP---YYNVLRILVPLT----IEDAQIRQGLEIIAQCF 421 (425)
T ss_pred eEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEe----cCCC---CCCEEEEECCCC----cCHHHHHHHHHHHHHHH
Confidence 4566666311 1124556777778998873 3221 136899987643 34899999999999888
Q ss_pred HH
Q 010008 469 EI 470 (520)
Q Consensus 469 ~~ 470 (520)
..
T Consensus 422 ~~ 423 (425)
T PRK08088 422 DE 423 (425)
T ss_pred Hh
Confidence 63
No 303
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.43 E-value=9.3e-11 Score=124.73 Aligned_cols=329 Identities=15% Similarity=0.075 Sum_probs=173.1
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.. +..+..+. + .++...+ ..+++++++.-..+ ..+..+||++||.+++... ..
T Consensus 59 h~~p~v~~a~~~q~~~-~~~~~~~~-~--~~~~~~~----la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~t 127 (433)
T PRK08117 59 HRHPKVVQAIKEQADK-LMHGPSGV-I--YYESILK----LAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVT 127 (433)
T ss_pred CCCHHHHHHHHHHHHh-ccCccccc-c--CCHHHHH----HHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhc
Confidence 3578888888877753 32222221 1 1222222 33677777732222 1244589999999888742 22
Q ss_pred CCCEEEEcCCCC-Cccccccccc-----cccc--cccccceEEEEEcccC---CCCC------CCCHHHHHHHhhh----
Q 010008 182 PHDRIMGLDLPH-GGHLSHGFMT-----PKRR--VSGTSIYFESMPYRLD---ESTG------LVDYDMLEKTAIL---- 240 (520)
Q Consensus 182 pGD~Vl~~~~~~-~ghls~g~~~-----~~~~--v~~~g~~~~~v~~~~d---~~~~------~iD~d~le~~i~~---- 240 (520)
...+|+..+-.| |.+......+ .... ....+ +..++++-. +... .-|++++++.++.
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 205 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGS--VYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTP 205 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCC--cEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCC
Confidence 235677776443 2221000000 0000 00001 112222210 0000 0256667776642
Q ss_pred cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCccc-CCC
Q 010008 241 FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGP 310 (520)
Q Consensus 241 ~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l-~Gp 310 (520)
.++.+||+.. ++.+...+ +++++++|++||+++|+|++|. |+...|.. . ..+. -.|+ .|+.|.+ .|.
T Consensus 206 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~ 282 (433)
T PRK08117 206 EEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGL 282 (433)
T ss_pred CcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCC
Confidence 2455666652 22223445 8999999999999999999976 65333321 0 0111 2466 4667998 456
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC--CEE
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKL 388 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G--~~v 388 (520)
+.|++++++ ++.+.+......+..+++.. .+++...+|+.+..++ ..+++..+.+++.+.|.+.. +.+
T Consensus 283 pigav~~~~------~i~~~~~~~~~~~T~~~np~-~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 352 (433)
T PRK08117 283 PLSAVVASK------ELMEQWPLGSHGTTFGGNPV-ACAAALATLEVIKEEK---LLDNANEMGAYALERLEVLKEKHPV 352 (433)
T ss_pred cceeEEEcH------HHHhhccCCCCCCCCCcCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 778888887 66665543333333344333 3444444677654333 34556666677777776531 222
Q ss_pred ec--CCCCCeeEEEEecCCC-----CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 389 VS--GGSDNHLVLVDLRPMG-----IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 389 ~~--~gt~~~~~~vd~~~~g-----~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
+. .+. ..++.+.+.... .....+.+.|.+.||.+... |. ....+|+..+.. ++++|++++.
T Consensus 353 ~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~----~~~~lRl~p~~~----~t~~~i~~~~ 420 (433)
T PRK08117 353 IGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GN----AGNVLRMIPPLT----VTKEEIDEGL 420 (433)
T ss_pred eeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CC----CCCEEEEeCCcc----CCHHHHHHHH
Confidence 21 111 123344443211 11244667778899988421 11 246899986643 4589999999
Q ss_pred HHHHHHHHH
Q 010008 462 DFIHEGVEI 470 (520)
Q Consensus 462 ~~i~~~l~~ 470 (520)
+.|.++++.
T Consensus 421 ~~l~~~l~~ 429 (433)
T PRK08117 421 DILDEALTE 429 (433)
T ss_pred HHHHHHHHH
Confidence 999998864
No 304
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.41 E-value=2.3e-10 Score=120.51 Aligned_cols=322 Identities=15% Similarity=0.133 Sum_probs=173.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+.. . .+..++ ++. .+ ...+++.+++... +. ....+|||+|+.+++....
T Consensus 56 h~~p~v~~ai~~q~~~~~-~--~~~~~~--~~~--~~--~la~~L~~~~~~~-~~---v~f~~sGseA~e~AlklAr~~~ 122 (408)
T PRK04612 56 HNDPDLVAALTEQAGKLW-H--TSNVFY--SAP--PL--KLAEELVTASRFA-EK---VFLCNSGTEANEAAIKLVRKWA 122 (408)
T ss_pred CCCHHHHHHHHHHHHhcc-c--cccccC--CHH--HH--HHHHHHHhhCCCC-CE---EEEcCchHHHHHHHHHHHHHHH
Confidence 347888888887765321 1 111111 111 11 1235566655322 21 2446899999998876431
Q ss_pred ---C--CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 010008 181 ---K--PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 250 (520)
Q Consensus 181 ---~--pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~---~~~iD~d~le~~i~~~~pklIi~~~ 250 (520)
. ++ .+|+...-.|.|. ... .++..+.. +..-..++.+. -...|.+.+++.+...++.+|++..
T Consensus 123 ~~~g~~~~r~~ii~~~~~yHG~-----t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP 195 (408)
T PRK04612 123 SSQGRPADKRVIVTFRGSFHGR-----TLA--AVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP 195 (408)
T ss_pred HhhCCCCCCcEEEEECCCcCCc-----cHH--HHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC
Confidence 1 22 3688777554332 110 11111110 00000001000 0123788998888653455666653
Q ss_pred CC-CCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCccc-CCCCceEEEeeCCCc
Q 010008 251 SA-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 322 (520)
Q Consensus 251 s~-~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l-~GprgG~I~~~~~~~ 322 (520)
.. .++ .. -+++|+++|+++|+++|+|++|. |+-..+....-.. +...-+.++.|.+ .|.+.|++++++
T Consensus 196 ~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~--- 271 (408)
T PRK04612 196 IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP--- 271 (408)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH---
Confidence 22 112 22 28899999999999999999974 5433331100000 2222334556998 456778888887
Q ss_pred chhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEec--CCCCCeeE
Q 010008 323 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLV 398 (520)
Q Consensus 323 ~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~--~gt~~~~~ 398 (520)
++.+.+.........+++.. ..++...+|+.+.++ +..+++.+..+++.+.|++. .+.++. .|. ..+.
T Consensus 272 ---~~~~~~~~~~~~~t~~~~p~-~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~ 343 (408)
T PRK04612 272 ---KVAETMQFGAHGTTFGGNPL-AAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLML 343 (408)
T ss_pred ---HHHhhhcCCCcCCCCCCCHH-HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEE
Confidence 56665554333333444333 333333456666543 34566666777777777662 222222 121 2233
Q ss_pred EEEecCC-CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 399 LVDLRPM-GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 399 ~vd~~~~-g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
-+.+.+. .-....+.+.|.+.||.+. |. ++..||+..+. .++++|++++.+.|++++..
T Consensus 344 ~i~~~~~~~~~a~~i~~~l~~~Gvlv~----~~-----g~~~lRl~Ppl----~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 344 GAVLAPAHAGQAGAILDLAAEHGLLLL----QA-----GPDVLRFVPAL----NLTDAELADGLARLRLALAD 403 (408)
T ss_pred EEEecCchhhHHHHHHHHHHHCCeEEe----eC-----CCCEEEEcCCc----cCCHHHHHHHHHHHHHHHHH
Confidence 3444321 1123557778889999983 21 24689997653 36699999999999998864
No 305
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=1.2e-10 Score=112.37 Aligned_cols=341 Identities=17% Similarity=0.164 Sum_probs=182.4
Q ss_pred cceEecCCCCChHHHHHHHhhhhhccCCCCC-CC--CCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-H
Q 010008 95 SLELIASENFTSRAVMEAVGSCLTNKYSEGL-PG--KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 170 (520)
Q Consensus 95 ~i~Liasen~~~~~V~ea~~s~l~~~y~~G~-p~--~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~ 170 (520)
.|.|..+..-.-|++.+.....+..-.++|- .. .+ |+|.+..+.+-+...+.+.+.+|.+-.. -|+..|+|| .
T Consensus 32 ~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cn-Y~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQs 108 (417)
T COG3977 32 AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCN-YDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQS 108 (417)
T ss_pred ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhc-CCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCccc
Confidence 3555544433446666665544443333331 11 12 4444444444444456788889987432 388899999 6
Q ss_pred HHHHHHHhh---CCCCC--EEEE-cCCCCCccccccccccccccccccceEEEE--EcccCCC---CCCCCHHHHHHHhh
Q 010008 171 ANFEVYTAI---LKPHD--RIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESM--PYRLDES---TGLVDYDMLEKTAI 239 (520)
Q Consensus 171 A~~~~l~al---l~pGD--~Vl~-~~~~~~ghls~g~~~~~~~v~~~g~~~~~v--~~~~d~~---~~~iD~d~le~~i~ 239 (520)
|.+.++.-+ ..-|+ +|+. +.|+|-|+-. +-..+-.|... .++++++ .+.+|++++. +.
T Consensus 109 ~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d---------~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~ 177 (417)
T COG3977 109 AFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYAD---------AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG 177 (417)
T ss_pred hHHHHHHHhcCccCCCcceeEeeccChhhccccc---------cccCccceeeccCCcccccccceeeccCHHHcc--cc
Confidence 777666554 23454 3433 4566644311 11111111111 1112222 2478888875 33
Q ss_pred hcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHhCCEEEEechhhc---ccccccccCCCCCccc-EEEeccCcc-cCC
Q 010008 240 LFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHIS---GLVAASVVADPFKYCD-VVTTTTHKS-LRG 309 (520)
Q Consensus 240 ~~~pklIi~~~s~~p~--~---~d~~~i~~ia~~~g~~li~D~Ah~~---gli~~~~~~~p~~~aD-iv~~S~hK~-l~G 309 (520)
+ ++.+|+++-|.||+ + ..+.++..+|++||+.|+.|.|+.. ++++.+..+ +=+-. +.++|++|- |+|
T Consensus 178 e-~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~--~w~~NiilC~SLSK~GLPG 254 (417)
T COG3977 178 E-STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATP--LWNENIILCMSLSKLGLPG 254 (417)
T ss_pred c-ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccc--cCCCCEEEEeehhhcCCCC
Confidence 4 78899999999987 3 2477888899999999999998532 223333221 11222 778999994 789
Q ss_pred CCceEEEeeCCCcchhhHHHhhccc-----CCCCCCCCChHHHHHHHHH---HHHHhcCchh-HHHHHHHHHHHHHHHHH
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAV---CLKHAQSPEF-KVYQNKVVSNCRALASR 380 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~---al~~~~~~~~-~~~~~~i~~na~~l~~~ 380 (520)
-|.|+++.++ ++.+.+... .-|+..|. +|++-.. .|..+.+.-. .-|.+++..-...|..+
T Consensus 255 ~R~GIiIane------~viqaitnmn~iisLap~~~G~----Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 255 SRCGIIIANE------KVIQAITNMNGIISLAPGRMGP----AIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred cceeEEEccH------HHHHHHHhccceeeecCCCccH----HHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 9999999998 666655331 22333332 2322111 1111110000 11222222223334444
Q ss_pred HHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCC--CCCCC--CCCCCCEEEEccCCccccCCCHHH
Q 010008 381 LVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNS--VPGDK--SALVPGGIRIGSPAMTTRGFSEKE 456 (520)
Q Consensus 381 L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~--~Pg~~--~~~~~~giRig~~~~tt~g~~~~d 456 (520)
|-+.-+.+..+ ...-+.|+.+....++..++++.|.+.|+.+-.+. .||-. -|-..-++|++.. -.++.
T Consensus 325 lp~~~~~iHkp-EGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~------~~~~~ 397 (417)
T COG3977 325 LPEYRCLIHKP-EGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV------PEPEK 397 (417)
T ss_pred cCccceeeecC-CcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC------CCHHH
Confidence 44334444443 23445565666667889999999999999983321 23322 1223347999753 12455
Q ss_pred HHHHHHHHHHHHH
Q 010008 457 FVAIADFIHEGVE 469 (520)
Q Consensus 457 ~~~la~~i~~~l~ 469 (520)
++.=..+|.+.++
T Consensus 398 ie~Gva~lae~ve 410 (417)
T COG3977 398 IEKGVAILAEEVE 410 (417)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555544443
No 306
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.40 E-value=2e-11 Score=123.76 Aligned_cols=228 Identities=17% Similarity=0.157 Sum_probs=142.7
Q ss_pred CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh
Q 010008 101 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 179 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g-~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al 179 (520)
+.+..++.+++++...+... .+ ..|+-+ ..+...+.. ..+.++.++|++.. +.+++-+.|+++++.++
T Consensus 35 G~s~~~~e~iea~~~~~~~~-v~----Le~~l~~g~~~~R~~~-~~~~~~~~~~aea~-----~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAP-VE----LETDLKTGKRGARLTE-LAELLCGLTGAEAA-----AIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhccc-ce----eeeecccchhhHHHHH-HHHHHhcccchhhe-----eeECCcHHHHHHHHhhh
Confidence 55678999999988776532 21 112221 122223322 22344445555442 22345558888888888
Q ss_pred CCCCCEEEEcCCCC-CccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCCC--
Q 010008 180 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR-- 255 (520)
Q Consensus 180 l~pGD~Vl~~~~~~-~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~-~s~~p~-- 255 (520)
..++..|+..-+.- |||+.- ...+...|. ..+.++ .++.-...+++.+|.+ ++++++=. .++|+.
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v-----~d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRV-----PDIIRLAGA--KLVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred ccCCeEEEEccccccCCCCCh-----hHHHHHcCC--EEEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 87656665443322 344321 124456676 555544 2456778888999998 88877543 566654
Q ss_pred CCCHHHHHHHHHHhCCEEEEechhhcccccccccCC--C-C-CcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhh
Q 010008 256 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--P-F-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 331 (520)
Q Consensus 256 ~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p-~-~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i 331 (520)
..+.+++.+||+++|+++++|.+ +|..... .+. + + .|+|+|++|++|.|.||++|+|++++ ++..++
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~-e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------elI~~l 243 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDK-EPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------ELIEKL 243 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--Ccccccc-ccchhHHHhcCCCEEEEecchhcCCCccceEechH------HHHHHH
Confidence 66888999999999999999986 4432111 111 1 1 27999999999999999999999999 788777
Q ss_pred cccCC--CCCCCCChHHHHHHHHHHHHHhcCch
Q 010008 332 NNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPE 362 (520)
Q Consensus 332 ~~~~~--p~~~g~p~~~~iaala~al~~~~~~~ 362 (520)
.+.-. ..-.+. ..++++..||+....++
T Consensus 244 q~~~l~Ralrv~K---~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 244 QSHPLKRALRVDK---ETLAALEAALELYLQPE 273 (395)
T ss_pred HhhhhhhhhhcCc---HhHHHHHHHHHHHcCch
Confidence 54321 111222 36778888888776654
No 307
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.40 E-value=1.9e-10 Score=121.99 Aligned_cols=325 Identities=15% Similarity=0.109 Sum_probs=176.7
Q ss_pred ccceEecCC-----CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 010008 94 KSLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Liase-----n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG 168 (520)
..|++..+. ...+|.|.+++...+.+.. . ++...+.. . ...+++.+++. ..+. + ....||
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~~~---~-~la~~L~~~~~-~~~~--v-~~~~sG 115 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTELE---V-ELAELVIELVP-SIEM--V-RMVNSG 115 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCHHH---H-HHHHHHHHhCC-CCCE--E-EEecCH
Confidence 446665442 1467899999888876522 1 11112211 1 23356666653 1222 2 346789
Q ss_pred HHHHHHHHHhhCC--CCCEEEEcCCCCCcccccccccc--cccc----ccccceE-----EEEEcccCCCCCCCCHHHHH
Q 010008 169 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYF-----ESMPYRLDESTGLVDYDMLE 235 (520)
Q Consensus 169 s~A~~~~l~all~--pGD~Vl~~~~~~~ghls~g~~~~--~~~v----~~~g~~~-----~~v~~~~d~~~~~iD~d~le 235 (520)
++|+..++..... .+++|+..+..|.|+- .+.... .... ...+... ..+.++ ..|+++++
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~ 188 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP------YNDLEAVE 188 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCcccccceEEcC------CCCHHHHH
Confidence 9999998886532 3688999888765541 000000 0000 0000000 001111 13788998
Q ss_pred HHhhh--cCCcEEEEc-CCCC-CCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-CCCCC-cccEEEeccCc
Q 010008 236 KTAIL--FRPKLIIAG-ASAY-PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHK 305 (520)
Q Consensus 236 ~~i~~--~~pklIi~~-~s~~-p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~~-~aDiv~~S~hK 305 (520)
+.+.. .++.+||+. ..++ +...+ +++|+++|++||+++|+|++|. |+...+.. ...+. ..|++ +++|
T Consensus 189 ~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi~--~~gK 265 (426)
T PRK00062 189 ELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDLT--TLGK 265 (426)
T ss_pred HHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcchH--hhhh
Confidence 88754 245677776 2333 33445 8999999999999999999975 65221111 01111 24654 5679
Q ss_pred cc-CCCCceEEEeeCCCcchhhHHHhhcc--cCCC-CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 306 SL-RGPRGGMIFFKKDPVLGVELESAINN--AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 306 ~l-~GprgG~I~~~~~~~~~~~l~~~i~~--~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
.+ .|++.|++++++ ++.+.++. ..+. ...+++... .++...+|+.+... +..+++.++.+++.+.|
T Consensus 266 ~l~~G~p~ga~~~~~------~i~~~~~~~~~~~~~~T~~~~p~~-~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l 335 (426)
T PRK00062 266 IIGGGLPVGAFGGRR------EIMEQLAPLGPVYQAGTLSGNPLA-MAAGLATLKLLKEP---GFYEELEALTKRLAEGL 335 (426)
T ss_pred HhhCCCcceeeeEHH------HHHHhhccCCCceecccCcCCHHH-HHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHH
Confidence 98 456788888887 67776642 1111 223443333 33333467766443 34556666666676666
Q ss_pred HH----CCCEEecCCCCCeeEEEEecCCCC---------C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccC
Q 010008 382 VE----LGYKLVSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 445 (520)
Q Consensus 382 ~~----~G~~v~~~gt~~~~~~vd~~~~g~---------~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~ 445 (520)
++ .++.....+ ...++-+.+..... + ...+.+.|.++||.+... ....+|+.
T Consensus 336 ~~~~~~~~~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~---------~~~~~~~~-- 403 (426)
T PRK00062 336 KEAAKKAGIPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPS---------QFEAGFVS-- 403 (426)
T ss_pred HHHHHHcCCceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecC---------CcCceeee--
Confidence 53 354432111 12233333322110 1 135777788899998431 11235553
Q ss_pred CccccCCCHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+ -++++|++++.+.+++++.
T Consensus 404 -~---~~t~~ei~~~~~~l~~~l~ 423 (426)
T PRK00062 404 -A---AHTDEDIEKTLEAARKAFA 423 (426)
T ss_pred -c---cCCHHHHHHHHHHHHHHHH
Confidence 1 2578999999999998875
No 308
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=1.7e-10 Score=122.31 Aligned_cols=325 Identities=18% Similarity=0.131 Sum_probs=173.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
-.|.|.+|+.+.+... ...... .|. ++ ...+ ..+++.+++.-..+. ....+||++|+.+++....
T Consensus 59 ~~p~v~~ai~~q~~~~-~~~~~~-~~~--~~---~~~~-la~~l~~~~p~~~~~---v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDRL-DHVIFA-GFT--HE---PAER-LAQRLVALTPGGLDH---VFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhhC-CCcccc-ccC--CH---HHHH-HHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHHH
Confidence 4688888887776532 110000 011 11 1122 335677776422221 2346899999998876431
Q ss_pred ---CCC-CEEEEcCCCCCccccccccccc-ccc---ccccc--eEEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 010008 181 ---KPH-DRIMGLDLPHGGHLSHGFMTPK-RRV---SGTSI--YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 248 (520)
Q Consensus 181 ---~pG-D~Vl~~~~~~~ghls~g~~~~~-~~v---~~~g~--~~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~ 248 (520)
++| .+|+...-.|.|.. .+..... ... .+.+. ....++++.+ +....+++++++.+.+. +..+||+
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t-~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~ 205 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDT-IGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV 205 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCcc-HHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 133 57888776553321 1100000 000 00000 0122222211 00112377888888642 3446666
Q ss_pred cC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCCC--CceEEE
Q 010008 249 GA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIF 316 (520)
Q Consensus 249 ~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~Gp--rgG~I~ 316 (520)
.. ...++ ...+++|+++|++||+++|+|++| .|+...|.. . .... ..|+++++ |+|.|. +.|+++
T Consensus 206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~~--K~l~gG~~p~~av~ 282 (423)
T PRK05964 206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCLS--KGLTGGYLPLAATL 282 (423)
T ss_pred ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeeee--hhhhcCcccceEEE
Confidence 53 22222 224889999999999999999998 454322211 0 0011 35777654 999553 568888
Q ss_pred eeCCCcchhhHHHhhccc------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEe
Q 010008 317 FKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 389 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~ 389 (520)
+++ ++.+.+... ...+..++ +...+++...+++.+..++ ..+++.++.+.+.+.|++. +++.+
T Consensus 283 ~~~------~i~~~~~~~~~~~~~~~~~T~~~-np~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i 352 (423)
T PRK05964 283 CTA------EIFEAFYSDDRAKAFMHSPSYTA-NPLACAAANASLDLFEDEP---VLERVAALSAGLAEGLEPFRDLPGV 352 (423)
T ss_pred EcH------HHHHhhhcCCcccccccCCCCCc-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhccCCCe
Confidence 877 666665321 11122223 3334444444677654433 4566666777788877663 33322
Q ss_pred cCC-CCCeeEEEEecCCCC--CHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 390 SGG-SDNHLVLVDLRPMGI--DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 390 ~~g-t~~~~~~vd~~~~g~--~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
... ....++.+.+..... ....+.+.|.+.||.+... ...||++.+.. ++++|++++.+.+++
T Consensus 353 ~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~----------~~~lR~~p~l~----~t~edId~~v~~l~~ 418 (423)
T PRK05964 353 ADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL----------GNTIYLMPPYI----ITAEELDRITDAIVE 418 (423)
T ss_pred EEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec----------CCEEEEeCCcc----cCHHHHHHHHHHHHH
Confidence 210 122344455532210 1456778888999998421 24799987644 458999999999998
Q ss_pred HHH
Q 010008 467 GVE 469 (520)
Q Consensus 467 ~l~ 469 (520)
+++
T Consensus 419 al~ 421 (423)
T PRK05964 419 VAD 421 (423)
T ss_pred HHh
Confidence 875
No 309
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.39 E-value=4e-10 Score=116.71 Aligned_cols=302 Identities=15% Similarity=0.118 Sum_probs=168.8
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
.-.|.|.+|+...+.+... .+..|. ++...+++ ++++++++.+. -+..+|||+|+.+++... ..+
T Consensus 40 h~~p~v~~ai~~ql~~~~~---~~~~~~--~~~~~~la----~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~ 105 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLVV---AGPMFE--HEEKEEML----EELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYT 105 (364)
T ss_pred CCCHHHHHHHHHHHHhcCC---ccCCcC--CHHHHHHH----HHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHh
Confidence 3468888888887765321 111222 22222222 56777777653 245689999999888754 345
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccc-----eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCC
Q 010008 183 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPR 255 (520)
Q Consensus 183 G-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-----~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~-~p~ 255 (520)
| ++|+..+..|.|... + .+...+. .+.+...++... -..|.+.+++.+.+ ++.+|++.... ..+
T Consensus 106 gr~~Ii~~~~syHG~t~-~------~ls~~~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~i~~-~~aAvivEpi~g~gG 176 (364)
T PRK04013 106 GRKEIIAMTNAFHGRTM-G------ALSATWKPKYREDFEPLVPGFKHI-PFNDVEAAKEAITK-ETAAVIFEPIQGEGG 176 (364)
T ss_pred CCCEEEEECCccccCch-h------hccCCCCcccccCCCCCCCCcEEe-cCCCHHHHHHHhcC-CcEEEEEcCCcCCCC
Confidence 6 899998876544311 1 1111110 011110011100 12377889988876 78888886322 222
Q ss_pred --CCC---HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCC-CCceEEEeeCCCcchhh
Q 010008 256 --DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE 326 (520)
Q Consensus 256 --~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~~~~~~~ 326 (520)
..| +++++++|+++|+++|.|+++. |+ -.|.. . .-+. ..|+++++ |.+.| -..|.++.++ +
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~------~ 246 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNF------D 246 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEec--ccccCCceeEEEEecc------c
Confidence 445 8999999999999999999975 54 33321 0 1111 46888885 99854 3346666665 3
Q ss_pred HHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC--CCCCeeEEEEecC
Q 010008 327 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG--GSDNHLVLVDLRP 404 (520)
Q Consensus 327 l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~--gt~~~~~~vd~~~ 404 (520)
+ .......+.++......++++ .|+.+.++++.+.+++ ..+.|.. +.+.. |. .-+.-+.+..
T Consensus 247 ~----~~~~~~~T~~gnp~~~aaa~a-~l~~i~~~~l~~~~~~-------~l~~l~~---~~v~~vRG~-Gl~~gve~~~ 310 (364)
T PRK04013 247 V----ERGKHGSTFGGNPLACKAVAV-TLRILRRERLVEKAGE-------KFIEIKG---ERVVTTRGR-GLMIGIVLKK 310 (364)
T ss_pred c----cCCCcCCCCCcCHHHHHHHHH-HHHHHHhccHHHHHHH-------HHHHhcc---CcceeeeeC-cEEEEEEeCC
Confidence 3 111222334443444444443 5776655444222222 1123322 11211 11 2233345532
Q ss_pred CCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 405 MGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 405 ~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
....+.+.+.+.|+.+... +...+|+.. .++ ++++|++++.+.|++++..
T Consensus 311 ---~~~~i~~~~~~~Gll~~~~---------g~~vlr~~P-pl~---it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 311 ---PVGKYVEELQNRGYLVHTA---------GQRVIRLLP-PLI---ISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred ---cHHHHHHHHHhCCcEEeeC---------CCCEEEEeC-Ccc---cCHHHHHHHHHHHHHHHHH
Confidence 2355777788899998421 235799964 455 6799999999999999864
No 310
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.38 E-value=1.7e-10 Score=125.62 Aligned_cols=280 Identities=18% Similarity=0.143 Sum_probs=167.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCC--
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~-- 181 (520)
+++++++-.+...+.|.... .+...+....+|..+.+++++++|.+. .|+. .+++||.||+.++.+.-+
T Consensus 94 ~~~paila~~~a~~~N~n~~------~~e~SP~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k 164 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNV------AYESSPATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIK 164 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCC------ccccCchHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhh
Confidence 34566654443333343211 122334567899999999999999986 4654 346677999876654311
Q ss_pred --C-----C------------------C-------------------------------EEEEcCCCCCccccccccccc
Q 010008 182 --P-----H------------------D-------------------------------RIMGLDLPHGGHLSHGFMTPK 205 (520)
Q Consensus 182 --p-----G------------------D-------------------------------~Vl~~~~~~~ghls~g~~~~~ 205 (520)
| + | +|+++. .+|+|. .
T Consensus 165 ~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~-----~ 236 (608)
T TIGR03811 165 SLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSW-----L 236 (608)
T ss_pred hccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECC---CccHHH-----H
Confidence 0 0 0 233222 223322 1
Q ss_pred cccccccceE-EEEEcccCCCCCCCCHHHHHHHhhhc----CC-cEEEEc--CCCCCCCCCHHHHHHHH---HHhCC--E
Q 010008 206 RRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF----RP-KLIIAG--ASAYPRDFDYPRMRQIA---DAVGA--L 272 (520)
Q Consensus 206 ~~v~~~g~~~-~~v~~~~d~~~~~iD~d~le~~i~~~----~p-klIi~~--~s~~p~~~d~~~i~~ia---~~~g~--~ 272 (520)
|...+.|.+. .++.+++| +++.+|+++|++.+.+. .| -+|+.. .+..+...|+++|.++| +++|+ |
T Consensus 237 KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~ 315 (608)
T TIGR03811 237 KAADIIGIGLDQVIPVPVD-SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFY 315 (608)
T ss_pred HHHHHcCCCcccEEEeecC-CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCcee
Confidence 3455566542 35567777 57899999999888642 23 234433 34444588999999998 66888 6
Q ss_pred EEEechhhcccc---cccc-------------------c--------C------CCCCcccEEEeccCcccCCCCc-eEE
Q 010008 273 LMMDMAHISGLV---AASV-------------------V--------A------DPFKYCDVVTTTTHKSLRGPRG-GMI 315 (520)
Q Consensus 273 li~D~Ah~~gli---~~~~-------------------~--------~------~p~~~aDiv~~S~hK~l~Gprg-G~I 315 (520)
+++|+|+. |.. ..+. + + ..++.+|-++..+||++.-|-+ |++
T Consensus 316 lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~l 394 (608)
T TIGR03811 316 LHVDAAYG-GYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGI 394 (608)
T ss_pred Eeeecccc-chhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEE
Confidence 99999854 421 1110 0 0 0134799999999999877877 888
Q ss_pred EeeCCCcchhhHHHhhcc---------cCCC------CCCCCChHHHHHHHHHHHHHh--cCchhHHHHHHHHHHHHHHH
Q 010008 316 FFKKDPVLGVELESAINN---------AVFP------GLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCRALA 378 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~---------~~~p------~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~i~~na~~l~ 378 (520)
++++. .+.+.+.. ...| +..|+..-...+++..+++.+ ...+|.++.++..++++++.
T Consensus 395 l~Rd~-----~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~ 469 (608)
T TIGR03811 395 VIQDI-----RMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFY 469 (608)
T ss_pred EEeCH-----HHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 88875 33222211 0011 112332223345566677765 45678999999999999999
Q ss_pred HHHHHCC-------CEE--ecCCCCCeeEEEEecCCCCC
Q 010008 379 SRLVELG-------YKL--VSGGSDNHLVLVDLRPMGID 408 (520)
Q Consensus 379 ~~L~~~G-------~~v--~~~gt~~~~~~vd~~~~g~~ 408 (520)
+.|.+.+ +++ +.+ .+-+++.+.+.+.+.+
T Consensus 470 ~~L~~~~~~~~~~~~el~~~~~-pdlniV~Fr~~~~g~~ 507 (608)
T TIGR03811 470 DFLNNLEFKVGDKEIEVHPLTK-PDFNMVDYVFNEKGND 507 (608)
T ss_pred HHHHhcccccCCCCeeEEecCC-CCcceEEEEEecCCCc
Confidence 9998743 444 333 2344455555555543
No 311
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.38 E-value=1.1e-09 Score=115.99 Aligned_cols=328 Identities=14% Similarity=0.109 Sum_probs=173.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs~A~~~~l~al-l~ 181 (520)
.-.|.|.+|+...+.. +. +....++. ++ ..+ +++ +++.+++... .+. .+..+|||+|+.+++... .-
T Consensus 56 h~~p~v~~ai~~ql~~-~~--~~~~~~~~-~~--~~~-~la-~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQ-FT--HTAYQIVP-YE--SYV-TLA-EKINALAPVSGQAK---TAFFTTGAEAVENAVKIARAH 124 (421)
T ss_pred CCCHHHHHHHHHHHHh-cc--CcccCccC-CH--HHH-HHH-HHHHHhCCCCCCce---EEEeCChHHHHHHHHHHHHHh
Confidence 3478888888777653 21 11100111 11 112 223 4566665421 121 244579999999877643 22
Q ss_pred CC-CEEEEcCCCCCccccccccc-------cccccccccceEEEEEcccCCCCCC---CCHHHHHHHhhh----cCCcEE
Q 010008 182 PH-DRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLI 246 (520)
Q Consensus 182 pG-D~Vl~~~~~~~ghls~g~~~-------~~~~v~~~g~~~~~v~~~~d~~~~~---iD~d~le~~i~~----~~pklI 246 (520)
.| .+|+...-.|.|.- .+... ......-....+..++++.+. .+. -|++.+++.+.. .++.+|
T Consensus 125 tgr~~ii~~~~~yHG~t-~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaav 202 (421)
T PRK09792 125 TGRPGVIAFSGGFHGRT-YMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAI 202 (421)
T ss_pred cCCCeEEEECCCcCCcc-HHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEE
Confidence 33 57888776543331 01000 000000000011233443321 111 134778887752 256788
Q ss_pred EEcCCCCCC---CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCccc-CCCCceEE
Q 010008 247 IAGASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMI 315 (520)
Q Consensus 247 i~~~s~~p~---~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l-~GprgG~I 315 (520)
++....+++ ..+ +++|+++|+++|+++|+|+.+. |+...+.. ..+. ..|+++ +.|+| +|.+.|++
T Consensus 203 i~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~-~a~~~~~~~pDi~t--~gK~l~~G~pigav 278 (421)
T PRK09792 203 IFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKL-FAMDHYADKPDLMT--MAKSLAGGMPLSGV 278 (421)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCch-hHHHhcCCCCcEEE--eehhhcCCCceEEE
Confidence 887544432 335 8899999999999999999854 44333321 1111 357654 46998 45778999
Q ss_pred EeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecCCC
Q 010008 316 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGS 393 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~gt 393 (520)
++++ ++.+.+.........+++.....++++ .++.+.+.+ ..+++.+..+.+.+.|++. .+..+...+
T Consensus 279 ~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa~a-~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~p~v~~vr 348 (421)
T PRK09792 279 VGNA------NIMDAPAPGGLGGTYAGNPLAVAAAHA-VLNIIDKES---LCERANQLGQRLKNTLIDAKESVPAIAAVR 348 (421)
T ss_pred EEcH------HHHhccCCCCcCCCCCCCHHHHHHHHH-HHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhCCCcceec
Confidence 9987 676665443333334444444444444 455554332 3444445555555555431 122222111
Q ss_pred -CCeeEEEEecCCC------CCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 394 -DNHLVLVDLRPMG------IDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 394 -~~~~~~vd~~~~g------~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
...++++.+.... .....+.+.+.+.||.+. +.. . ....||+..+. + ++++|+++..+++.+
T Consensus 349 G~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~g--~-~~~~irl~P~l-~---i~~~ei~~~~~~l~~ 417 (421)
T PRK09792 349 GLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLL----TCG--A-YGNVIRFLYPL-T---IPDAQFDAAMKILQD 417 (421)
T ss_pred ccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEe----ecC--C-CCCEEEEeCCC-c---CCHHHHHHHHHHHHH
Confidence 1345566664221 123456677778999983 111 1 24689997554 2 458999999999988
Q ss_pred HHH
Q 010008 467 GVE 469 (520)
Q Consensus 467 ~l~ 469 (520)
++.
T Consensus 418 ~l~ 420 (421)
T PRK09792 418 ALS 420 (421)
T ss_pred HHh
Confidence 874
No 312
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.36 E-value=1e-09 Score=112.83 Aligned_cols=316 Identities=18% Similarity=0.137 Sum_probs=176.7
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCCC
Q 010008 106 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 183 (520)
Q Consensus 106 ~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~pG 183 (520)
+|.|.+|+...+.+..+.|.|. ++|-...+.+.+++..-. .| . .++|||+|++.+++.. .---
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e-~v--r-fvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIE-KV--R-FVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCccc-EE--E-EecchhHHHHHHHHHHHHhhCC
Confidence 6889999999998887777665 334445578888887732 22 2 2589999999887643 2235
Q ss_pred CEEEEcCCCCCccccccccccccc------cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC-
Q 010008 184 DRIMGLDLPHGGHLSHGFMTPKRR------VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA- 250 (520)
Q Consensus 184 D~Vl~~~~~~~ghls~g~~~~~~~------v~~~g~~~----~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~- 250 (520)
|+|+..+-+|.||......-.... ....|..- ..+.++ .-|++.++++++.. +...||+..
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 889988877766632211100000 00111100 111111 24889999999875 345677652
Q ss_pred -CCCCC----CCCHHHHHHHHHHhCCEEEEechhhcccc-cccccCCCCC-cccEEEeccCcccC-CCCceEEEeeCCCc
Q 010008 251 -SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 322 (520)
Q Consensus 251 -s~~p~----~~d~~~i~~ia~~~g~~li~D~Ah~~gli-~~~~~~~p~~-~aDiv~~S~hK~l~-GprgG~I~~~~~~~ 322 (520)
.|.+. .--++.|+++|+++|++||.|+.+. |+- ..+-...-+. ..|+.+.+ |.+. |...|.+-+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT-GFR~~~gGaq~~~gi~PDlttlG--KiIGGGlP~ga~gGr~--- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT-GFRVALGGAQGYYGVEPDLTTLG--KIIGGGLPIGAFGGRA--- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh-hcccCCcccccccCcCcchhhhh--hhhcCCcceeeeccHH---
Confidence 23232 2237899999999999999999853 322 1111111111 35777665 9884 45668888888
Q ss_pred chhhHHHhhcccC--C-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH----HCCCEEecCCCCC
Q 010008 323 LGVELESAINNAV--F-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV----ELGYKLVSGGSDN 395 (520)
Q Consensus 323 ~~~~l~~~i~~~~--~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~----~~G~~v~~~gt~~ 395 (520)
++.+.+...- + .++..+ +..+++|-.++++++.+.+ ...+++.+..+.|.+.|+ +.|+++......+
T Consensus 284 ---eiM~~~~p~g~vyqaGT~sg-nplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gs 357 (432)
T COG0001 284 ---EIMEQLAPLGPVYQAGTLSG-NPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGS 357 (432)
T ss_pred ---HHHhhhCCCCCccccCCCCC-cHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecc
Confidence 6777665432 1 111122 2234444445787776521 122444444555655554 4677765432222
Q ss_pred eeEEEEecCC---CC------CH---HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHH
Q 010008 396 HLVLVDLRPM---GI------DG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 396 ~~~~vd~~~~---g~------~~---~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~ 463 (520)
.+.+ -+... +. +. ..+...|.+.||.+. |+. +. ..=+| .-++++|+++..++
T Consensus 358 m~~i-~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~----ps~---~e--a~flS------~ahte~di~~~~~a 421 (432)
T COG0001 358 MFGI-FFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLA----PSQ---FE--AGFLS------TAHTEEDIDRTLEA 421 (432)
T ss_pred eEEE-EecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccC----Ccc---cc--ceeee------cccCHHHHHHHHHH
Confidence 2222 22221 10 11 123346678899883 321 11 11122 33679999999999
Q ss_pred HHHHHHH
Q 010008 464 IHEGVEI 470 (520)
Q Consensus 464 i~~~l~~ 470 (520)
++++++.
T Consensus 422 ~~~~~~~ 428 (432)
T COG0001 422 ADEAFKE 428 (432)
T ss_pred HHHHHHH
Confidence 9987764
No 313
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.35 E-value=2.1e-09 Score=115.95 Aligned_cols=324 Identities=14% Similarity=0.099 Sum_probs=170.7
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcC-CCCCCCceeeecCChHHHHHHHHHhhC--
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL-- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg-~~~~~~~~~V~~~sGs~A~~~~l~all-- 180 (520)
.-.|.|.+|+...+.. +...... +...++...++ .+++.+++. .+.+. ....+||++||.+++....
T Consensus 105 h~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~l----ae~L~~~~~~~~~~~---v~f~~SGsEA~e~AlKlAr~~ 174 (504)
T PLN02760 105 GSEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLDL----AKELLEMFTARKMGK---VFFTNSGSEANDTQVKLVWYY 174 (504)
T ss_pred CCCHHHHHHHHHHHhh-ccceecc--cccCcHHHHHH----HHHHHhhcCCCCCCE---EEEeCChHHHHHHHHHHHHHH
Confidence 3479999999888753 2211110 01112222222 256666653 22221 2346899999998887652
Q ss_pred -----CCC-CEEEEcCCCCCccccccccccccccccccce------------EEEEEcccC-----CCCC-----CCCHH
Q 010008 181 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD-----ESTG-----LVDYD 232 (520)
Q Consensus 181 -----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~------------~~~v~~~~d-----~~~~-----~iD~d 232 (520)
++| .+|+..+-.|.|.. .+ .+++.|.. +..+++|.. +... ...++
T Consensus 175 ~~~~g~~~r~~iI~~~~~yHG~t-~~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 247 (504)
T PLN02760 175 NNALGRPNKKKFIARSKSYHGST-LI------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAD 247 (504)
T ss_pred HHhcCCCCCcEEEEECCCccCCh-Hh------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHH
Confidence 233 57887775543321 11 11112210 111111100 0000 01124
Q ss_pred HHHHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechh-hcccccccccCCCCC-cccEEEe
Q 010008 233 MLEKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTT 301 (520)
Q Consensus 233 ~le~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah-~~gli~~~~~~~p~~-~aDiv~~ 301 (520)
++++++.. .++.+||+.. .+.+...+ +++|+++|+++|+++|+|++| ..|-........-+. -.|++++
T Consensus 248 ~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl 327 (504)
T PLN02760 248 NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL 327 (504)
T ss_pred HHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe
Confidence 56766642 1345666652 22222444 999999999999999999997 344332110000011 2688776
Q ss_pred ccCcccCCC--CceEEEeeCCCcchhhHHHhhccc-------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 010008 302 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 302 S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 372 (520)
+ |.++|. ..|.+++++ ++.+.+... ...++.++......++++ +|+.+.++ +..+++.+
T Consensus 328 g--K~lggG~~PigAv~~~~------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala-~Le~i~~~---~l~~~~~~ 395 (504)
T PLN02760 328 A--KALSSAYMPIGAVLVSP------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALE-ALKIYKER---NIPEHVNK 395 (504)
T ss_pred c--ccccCCccccceEeecH------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHH-HHHHHHhC---CHHHHHHH
Confidence 5 999652 355577776 566655321 122344554444444443 57766543 34666777
Q ss_pred HHHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCC-----C--C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCE
Q 010008 373 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----I--D---GARVEKILDMASITLNKNSVPGDKSALVPGG 439 (520)
Q Consensus 373 na~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g-----~--~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~g 439 (520)
+.++|.+.|++. ...++.. |. .-+.-+.+.... . + ...+.+.|.+.||.+... ...
T Consensus 396 ~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------g~~ 464 (504)
T PLN02760 396 IAPRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA----------GDN 464 (504)
T ss_pred HHHHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----------CCE
Confidence 777787777652 1222221 11 122333442211 0 0 234667778899998421 246
Q ss_pred EEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 440 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 440 iRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+|++.| ++ ++++|++++.+++++++...
T Consensus 465 lrl~Pp-l~---it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 465 IMMSPP-LI---ITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 899765 33 56999999999999988643
No 314
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.35 E-value=5.5e-09 Score=110.69 Aligned_cols=329 Identities=17% Similarity=0.124 Sum_probs=174.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.+.. . ....++ .++ ...+ ..+++.+++.-...+ -.+..+|||+|+.+++... ..
T Consensus 56 h~~p~v~~ai~~ql~~l~-~--~~~~~~-~~~---~~~~-la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~t 125 (425)
T PRK07495 56 HRHPRVIAAVKAQLDRFT-H--TCHQVV-PYE---NYVR-LAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAAT 125 (425)
T ss_pred CCCHHHHHHHHHHHhhcc-C--cccCcc-CCH---HHHH-HHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhh
Confidence 356888888877765421 1 100001 111 1122 335677776432111 1245689999999887643 22
Q ss_pred CCCEEEEcCCCCCccccccccc-------cccccccccceEEEEEcccCCCCCCCC----HHHHHHHhhh----cCCcEE
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMT-------PKRRVSGTSIYFESMPYRLDESTGLVD----YDMLEKTAIL----FRPKLI 246 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~-------~~~~v~~~g~~~~~v~~~~d~~~~~iD----~d~le~~i~~----~~pklI 246 (520)
...+|+...-.|.|.- .+... ......-.-..+..++++.+. . ..+ ++++++.+.. .+..+|
T Consensus 126 gr~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-g~~~~~~~~~l~~~~~~~~~~~~iaav 202 (425)
T PRK07495 126 GRSAVIAFGGGFHGRT-FMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-H-GVSVEQSLAALDKLFKADVDPQRVAAI 202 (425)
T ss_pred CCCeEEEECCCcCCcc-HHHhhhcCCCcccccCCCCCCCCeEEecCCccc-c-cccHHHHHHHHHHHHHhccCCCceEEE
Confidence 3457887775543321 01000 000000000011233333221 1 122 4455666542 246777
Q ss_pred EEcCC-CCCC-C----CCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCccc-CCCCceEEE
Q 010008 247 IAGAS-AYPR-D----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL-RGPRGGMIF 316 (520)
Q Consensus 247 i~~~s-~~p~-~----~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l-~GprgG~I~ 316 (520)
|+... .+.+ . .-+++|+++|+++|+++|+|++|. |+-..+.. ...+. -.|++++ .|.+ .|.+.|+++
T Consensus 203 i~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~tl--sK~l~~G~pigav~ 279 (425)
T PRK07495 203 IIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLTTM--AKGLAGGFPLAAVT 279 (425)
T ss_pred EECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEEee--hhhhcCCccceEEE
Confidence 77622 2222 1 237899999999999999999964 65333321 01111 2466555 5998 456779999
Q ss_pred eeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecC--C
Q 010008 317 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--G 392 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~--g 392 (520)
+++ ++.+.+.........+++.....+++ ++++.+.+.+ +.+++.+..++|.+.|++. .+..+.. |
T Consensus 280 ~~~------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG 349 (425)
T PRK07495 280 GRA------EIMDAPGPGGLGGTYGGNPLGIAAAH-AVLDVIEEED---LCERANQLGNRLKQRLASLRETVPEIADIRG 349 (425)
T ss_pred EcH------HHHhccCCCCcCCCCCCCHHHHHHHH-HHHHHHHhch---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 987 66666554333333444444444444 3566665433 4455555666676666552 2222211 2
Q ss_pred CCCeeEEEEecCCC---CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHH
Q 010008 393 SDNHLVLVDLRPMG---ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 393 t~~~~~~vd~~~~g---~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~ 466 (520)
. ..+.++.+.... -+ ...+.+.+.+.|+.+... | + ....||+..| ++ ++++|++++.+.+++
T Consensus 350 ~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g---~-~~~~~r~~Pp-l~---it~~~id~~~~~l~~ 417 (425)
T PRK07495 350 P-GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G---V-HGNVIRFLAP-IT---IQDDVFAEALDILEA 417 (425)
T ss_pred C-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C---C-CCCEEEEeCC-Cc---cCHHHHHHHHHHHHH
Confidence 2 345566664321 01 234666677899998431 1 1 1357999644 55 679999999999999
Q ss_pred HHHH
Q 010008 467 GVEI 470 (520)
Q Consensus 467 ~l~~ 470 (520)
+++.
T Consensus 418 ~l~~ 421 (425)
T PRK07495 418 SILE 421 (425)
T ss_pred HHHH
Confidence 9864
No 315
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.35 E-value=2.2e-10 Score=113.08 Aligned_cols=308 Identities=18% Similarity=0.197 Sum_probs=191.1
Q ss_pred HHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCC--CCCccccccccccccccccccceEEEEEcccC
Q 010008 146 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL--PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 223 (520)
Q Consensus 146 ~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~--~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d 223 (520)
+.+++.||.++ .+-.+-|-.|-...+..++++|+.+...-. ....|+.... ..+...|. .++.+.++
T Consensus 86 ~avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr----~h~~~ng~--~~~n~~~~ 154 (471)
T COG3033 86 DAVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTR----GHIQINGA--TPRNVYVD 154 (471)
T ss_pred HHHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecchh----HHHHhcCC--cccccccc
Confidence 45667899875 344566777877778888888777655211 1223332221 12223333 22222222
Q ss_pred C---------CCCCCCHHHHHHHhhhcCC---cEEEEcCCCCC---C---CCCHHHHHHHHHHhCCEEEEechhhccccc
Q 010008 224 E---------STGLVDYDMLEKTAILFRP---KLIIAGASAYP---R---DFDYPRMRQIADAVGALLMMDMAHISGLVA 285 (520)
Q Consensus 224 ~---------~~~~iD~d~le~~i~~~~p---klIi~~~s~~p---~---~~d~~~i~~ia~~~g~~li~D~Ah~~gli~ 285 (520)
. -.|.+|++.|+++|.+..+ -.|++..++|+ . ..+++++.+||+++++.++.|++..+.-.+
T Consensus 155 ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaY 234 (471)
T COG3033 155 EAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAY 234 (471)
T ss_pred ccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhh
Confidence 1 1368999999999987543 35555444443 2 457899999999999999999876543221
Q ss_pred c------cccCCC--------CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhh-----cccCCCCCCCCChHH
Q 010008 286 A------SVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI-----NNAVFPGLQGGPHNH 346 (520)
Q Consensus 286 ~------~~~~~p--------~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i-----~~~~~p~~~g~p~~~ 346 (520)
. +..... +.|||-++.|.-|--..+-||++..+++. .+++.... -.--||. .|+..--
T Consensus 235 FIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~--~fDvy~~~~~~~V~~eG~~t-YGgl~Gr 311 (471)
T COG3033 235 FIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDS--FFDVYEECRTLVVVQEGFPT-YGGLAGR 311 (471)
T ss_pred hhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCcc--HHHHHHHHHhheEeeccccc-cCcccch
Confidence 1 111222 23899999999996556788999999851 01122221 1122333 3554555
Q ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCC-------CCCHHH-HHHHHhh
Q 010008 347 TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM-------GIDGAR-VEKILDM 418 (520)
Q Consensus 347 ~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~-------g~~~~~-~~~~L~~ 418 (520)
.+.++|+.|.+..... |.++.++..++|++.|.+.|++++.+ ...|-+++|.... ...++. +.++..+
T Consensus 312 dmealAvGL~e~~~~~---yl~~Rv~Qv~YL~~~l~~~GVpi~~p-aGGHavfvda~~~lphip~eqFpaqala~ely~e 387 (471)
T COG3033 312 DMEALAVGLREGVNFD---YLAHRVAQVQYLADGLEEAGVPIVQP-AGGHAVFVDAGKFLPHIPAEQFPAQALACELYKE 387 (471)
T ss_pred hHHHHHHHHHHhcCcH---HHHHHHHHHHHHHHHHHhcCCeeEec-CCCceEEeehhhhcCCCChhhCcHHHHHHHHHHH
Confidence 7889999999877644 45666677899999999999998765 2368788875321 122333 4455578
Q ss_pred cCeEEcC-CC--CCCCC-C----CCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH
Q 010008 419 ASITLNK-NS--VPGDK-S----ALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA 474 (520)
Q Consensus 419 ~gI~v~~-~~--~Pg~~-~----~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~ 474 (520)
.||.+.- +. .+-|. . +....-+|+..|- +-.+.+.|+.+++.++++.++..++
T Consensus 388 ~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR---rtYt~~HmD~V~~a~~~l~e~~~~i 448 (471)
T COG3033 388 AGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR---RTYTQTHMDFVIEAFKALKENAEDI 448 (471)
T ss_pred hCeeeeeeeceecccCCCccccCCCchheeeEeccc---cccchhHHHHHHHHHHHHHhccccC
Confidence 9997642 21 12222 1 1122469997664 4478999999999999998876444
No 316
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.35 E-value=1e-09 Score=117.21 Aligned_cols=323 Identities=14% Similarity=0.087 Sum_probs=173.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l 180 (520)
.-.|.|.+|+...+.... . .. +++. ++.. . ...+++.+++.-..+. .....|||+|+.+++... .
T Consensus 98 H~~p~v~~Ai~~ql~~l~-~--~~-~~~~-~~~~---~-~lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t 165 (459)
T PRK11522 98 HRNPVVVSAVQNQLAKQP-L--HS-QELL-DPLR---A-MLAKTLAALTPGKLKY---SFFCNSGTESVEAALKLAKAYQ 165 (459)
T ss_pred CCCHHHHHHHHHHHhhCc-c--cc-cccC-CHHH---H-HHHHHHHHhCCCCCCE---EEEeCCchHHHHHHHHHHHHHh
Confidence 347899999988775321 1 11 1221 2211 2 2235666666432221 234579999999887643 2
Q ss_pred -CCC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 010008 181 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 249 (520)
Q Consensus 181 -~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~---~~iD~d~le~~i~~-----~~pklIi~~ 249 (520)
+.| .+|+...-.|. |.... .+...+.. +..-+.+..+.. ...|.+++++.+.. .+..+||+.
T Consensus 166 ~~~gr~~ii~~~~~yH-----G~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 166 SPRGKFTFIATSGAFH-----GKSLG--ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred ccCCCcEEEEecCCCC-----CCcHH--HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 123 35777665443 32110 11122210 000000111110 12377888887753 133456665
Q ss_pred C--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCCC--CceEEEee
Q 010008 250 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK 318 (520)
Q Consensus 250 ~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~Gp--rgG~I~~~ 318 (520)
. ++.+...+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|++++ .|.|.|. ..|.++++
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILCL--AKALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEEe--chhhhCCCccceeEEEc
Confidence 2 22222344 8999999999999999999984 54212210 0 0011 3688855 5999652 34555555
Q ss_pred CCCcchhhHHHhhccc--CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCE-EecC--
Q 010008 319 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVSG-- 391 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~-v~~~-- 391 (520)
+ ++.+.+... .+..+.+++.....+++ ++|+.+.+++ ..+++.++.++|.+.|++. .+. ++..
T Consensus 316 ~------~i~~~~~~~~~~~~~T~~gnp~~~Aaal-a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~Vr 385 (459)
T PRK11522 316 E------EVFSVLFDNPFLHTTTFGGNPLACAAAL-ATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLVQEAR 385 (459)
T ss_pred H------HHHHHhccCCcccCCCCCCCHHHHHHHH-HHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEE
Confidence 5 455544221 22233444343333343 3677765543 4567777788888888763 233 2221
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
| ...+.-+.+.... ....+.+.|.+.||.+... . .....+|+..+.. ++++|++++.+.+.+++...
T Consensus 386 G-~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~-~------~~~~~lr~~Ppl~----~t~~~id~~l~~l~~~l~~~ 452 (459)
T PRK11522 386 G-KGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGT-L------NNAKTIRIEPPLT----LTIEQCEQVLKAARKALAAM 452 (459)
T ss_pred e-ceeEEEEEecCch-HHHHHHHHHHHCCeEEEec-C------CCCCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 2 1234445554321 2355777788899998532 1 1246799976533 56999999999999998754
No 317
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.33 E-value=1.9e-09 Score=114.36 Aligned_cols=320 Identities=17% Similarity=0.139 Sum_probs=169.9
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l 180 (520)
.-.|.|.+|+...+.+.. +.. +|+. ++.. . ...+++++++.-..+ .....+|||+||.+++... .
T Consensus 91 h~hp~v~~Av~~ql~~l~---~~~-~~~~-~~~~---~-~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQP---LHS-QELL-DPLR---A-LLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCCHHHHHHHHHHHHhCC---Ccc-cccC-CHHH---H-HHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 457899999888775432 111 2221 2211 2 233567777643322 1244689999999887632 2
Q ss_pred C-CC-CEEEEcCCCCCccccccccccccccccccce-EEEEEcccCCCC---CCCCHHHHHHHhhh-----cCCcEEEEc
Q 010008 181 K-PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 249 (520)
Q Consensus 181 ~-pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-~~~v~~~~d~~~---~~iD~d~le~~i~~-----~~pklIi~~ 249 (520)
. .| .+|+...-.|.|.- .+ .+..++.. +.....++.+.- -..|.+.+++.+.. .+..+||+.
T Consensus 159 ~~~gr~~ii~~~~~yHG~t-~~------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGKS-LG------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hhcCCcEEEEECCCccCCC-HH------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 1 23 57887776543321 01 11111110 000000111000 02366777766642 234566665
Q ss_pred C--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCCC--CceEEEee
Q 010008 250 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFK 318 (520)
Q Consensus 250 ~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~Gp--rgG~I~~~ 318 (520)
. +..+...+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|+++ +.|.|.|. ..|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEec
Confidence 2 22222444 8999999999999999999983 43212211 0 0011 368887 45999642 45666677
Q ss_pred CCCcchhhHHHhhccc--CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCE-Eec--C
Q 010008 319 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK-LVS--G 391 (520)
Q Consensus 319 ~~~~~~~~l~~~i~~~--~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~-v~~--~ 391 (520)
+ ++.+.+... .+..+.++......+++ ++|+.+.+++ ..+++.+..++|.+.|++. .++ .+. .
T Consensus 309 ~------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~-a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vR 378 (442)
T TIGR03372 309 E------AVFSVLFDNPFLHTTTFGGNPLACAAAL-ATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEAR 378 (442)
T ss_pred H------HHHHhhhccCccccCCCCCCHHHHHHHH-HHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 6 565555221 22233444333333333 3577665433 3455555666777777652 122 111 1
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
| ...++-+.+... .....+.+.|.+.||.+... .| .+..+||..| ++ ++++|++++.+++++++
T Consensus 379 G-~Gl~~giel~~~-~~~~~i~~~l~~~Gvl~~~~-~~------~~~~lr~~Pp-l~---~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 379 G-KGLLMAIEFRDN-EIGYAFAKELFQQNILVAGT-LN------NAKSIRIEPP-LT---ITIEQCALVIKAAKDAL 442 (442)
T ss_pred c-ceEEEEEEeCCh-HHHHHHHHHHHHCCcEEeec-CC------CCCEEEEECC-cc---cCHHHHHHHHHHHHHhC
Confidence 2 233444555322 12355777788899998532 11 1357999755 33 67999999999998753
No 318
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=6.4e-09 Score=110.75 Aligned_cols=330 Identities=15% Similarity=0.050 Sum_probs=174.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.+... ....++ .++. .+| ..+++.+++....+. ....+|||+|+.+++... ..
T Consensus 57 h~~p~v~~Ai~~ql~~~~~---~~~~~~-~~~~--~~~--la~~L~~~~p~~~~~---v~f~~sGsEAve~AlklAr~~t 125 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLIH---YTPIYG-FPVE--PLL--LAEKLIEIAPGDNPK---VSFGLSGSDANDGAIKFARAYT 125 (443)
T ss_pred CCCHHHHHHHHHHHHhccC---cccccc-CcHH--HHH--HHHHHHHhCCCCCCE---EEEcCCHHHHHHHHHHHHHHhc
Confidence 4578888888887764311 111111 1221 122 235677776543222 244689999999887643 22
Q ss_pred CCCEEEEcCCCCCcc-ccccccccccccc--ccc--ceEEEEEcccCCC-CCC--------CCHHHHHHHhhh----cCC
Q 010008 182 PHDRIMGLDLPHGGH-LSHGFMTPKRRVS--GTS--IYFESMPYRLDES-TGL--------VDYDMLEKTAIL----FRP 243 (520)
Q Consensus 182 pGD~Vl~~~~~~~gh-ls~g~~~~~~~v~--~~g--~~~~~v~~~~d~~-~~~--------iD~d~le~~i~~----~~p 243 (520)
...+|+...-.|.|. ......+...... ..+ ..+..++++-... .+. -+.+.+++++.. .++
T Consensus 126 gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 126 KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 235677665443222 1000000000000 000 0012223321000 000 123455666642 357
Q ss_pred cEEEEcCCCCCC--CC----CHHHHHHHHHHhCCEEEEechhhcccccccccCC--CCC-cccEEEeccCccc-CCCCce
Q 010008 244 KLIIAGASAYPR--DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGG 313 (520)
Q Consensus 244 klIi~~~s~~p~--~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~--p~~-~aDiv~~S~hK~l-~GprgG 313 (520)
++|++....+++ .. -+++++++|+++|+++|+|++|. |+...+.... .+. ..|++++ +|.+ .|++.|
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiitl--sK~l~~G~pig 282 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIITL--GKPLGGGLPIS 282 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEEe--cccccCCceeE
Confidence 888887433332 22 28899999999999999999965 5433332110 111 3577754 7998 567889
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecC
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG 391 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~ 391 (520)
++++++ ++.+.+.........+++.....+++ .+++.+.+++ ..+++.++.++|.+.|++. .+.++..
T Consensus 283 av~~~~------~i~~~~~~~~~~~T~~~~p~~~aaa~-a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~ 352 (443)
T PRK08360 283 ATIGRA------EIMDSLPPLAHAFTLSGNPVASAAAL-AVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGD 352 (443)
T ss_pred EEEEcH------HHHhhhcCCCCCCCCCcCHHHHHHHH-HHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 999987 67666654323333444444444333 3576665433 3556666667777776552 2333221
Q ss_pred --CCCCeeEEEEecCCC----CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 392 --GSDNHLVLVDLRPMG----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 392 --gt~~~~~~vd~~~~g----~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
| ..-++-+++.... .+ ...+...|.+.||.+... ....+|+..+.. ++++|++++.+
T Consensus 353 vrg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lr~~P~l~----~t~~~id~~~~ 418 (443)
T PRK08360 353 VRG-IGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------SGNVLRIQPPLT----IEKEVLDEGLD 418 (443)
T ss_pred eec-cceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHH
Confidence 2 1223333442110 01 234667788899998421 135799975533 56999999999
Q ss_pred HHHHHHHHH
Q 010008 463 FIHEGVEIT 471 (520)
Q Consensus 463 ~i~~~l~~~ 471 (520)
.+.+++...
T Consensus 419 ~l~~~l~~~ 427 (443)
T PRK08360 419 ILEEAIEDV 427 (443)
T ss_pred HHHHHHHHH
Confidence 999998753
No 319
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.31 E-value=4.5e-09 Score=109.81 Aligned_cols=328 Identities=18% Similarity=0.111 Sum_probs=176.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-C-C
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-L-K 181 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs~A~~~~l~al-l-~ 181 (520)
-+|.|.+|+...+..-. + ...+|......++. .+++.+++-.+ .+ .....+||++||.+++... . .
T Consensus 73 ~hP~Vv~Av~~q~~~~~-h--~~~~~~~~e~~v~~-----ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~T 141 (447)
T COG0160 73 NHPRVVEAVKRQLAKLN-H--THTRDLYYEPYVEL-----AEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYT 141 (447)
T ss_pred CCHHHHHHHHHHHHHhh-c--ccCCcccchhHHHH-----HHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHh
Confidence 57999999887665321 1 11122221222222 24566666543 22 2455789999999888643 2 2
Q ss_pred CCCEEEEcCCCCCcccccccc--ccccccc---c--ccceEEEEEcccCCCC-CCC--------CHHHHHHHhhh-----
Q 010008 182 PHDRIMGLDLPHGGHLSHGFM--TPKRRVS---G--TSIYFESMPYRLDEST-GLV--------DYDMLEKTAIL----- 240 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~--~~~~~v~---~--~g~~~~~v~~~~d~~~-~~i--------D~d~le~~i~~----- 240 (520)
-...|+...-.|.|. |++.. +..+... + ....+..++||..... +.. ..+.++..+..
T Consensus 142 gr~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~ 220 (447)
T COG0160 142 GRPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGP 220 (447)
T ss_pred CCCcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCC
Confidence 245677776654332 11111 0000000 0 0011233444421110 111 22334443322
Q ss_pred cCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCcccCC-
Q 010008 241 FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLRG- 309 (520)
Q Consensus 241 ~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l~G- 309 (520)
.++-++|+..- ..++ .--+++++++|++||+++|+|+.|. |+--.|. -..++ ..||+|++ |.+.|
T Consensus 221 ~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~-~fa~E~~gv~PDivt~a--K~ig~G 296 (447)
T COG0160 221 EEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGK-MFAFEHFGVEPDIVTLA--KSLGGG 296 (447)
T ss_pred CceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccc-chhhhhcCCCCCEEEec--ccccCC
Confidence 24567777522 1222 1237899999999999999999974 4332231 11122 36899887 99854
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCE
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYK 387 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~ 387 (520)
...|.+++++ ++.+ .......++.+|......+|++ .|+.+.++ ...++..+.-++|.+.|.+ ..++
T Consensus 297 ~Pl~avv~r~------ei~~-~~~g~~~~Tf~GNpva~Aaa~A-vL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~ 365 (447)
T COG0160 297 LPLSAVVGRA------EIMD-WPPGGHGGTFGGNPVACAAALA-VLDVIEEE---NLLERAAELGEYLRDRLEELQEKHP 365 (447)
T ss_pred CceeEEeccH------Hhcc-cCCcccCCCCCcCHHHHHHHHH-HHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4458888887 4544 3333344445665555555554 46655443 4456666667777777765 2455
Q ss_pred EecCCCC-CeeEEEEecCC----CCCH---HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 388 LVSGGSD-NHLVLVDLRPM----GIDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 388 v~~~gt~-~~~~~vd~~~~----g~~~---~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
++.+-.. ..+.-+++... .-+. ..+.+.+.+.|+.+... | ...+.|||-.| +| ++++++++
T Consensus 366 ~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~---G----~~~nviRi~PP-L~---is~e~~d~ 434 (447)
T COG0160 366 LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC---G----PHGNVLRILPP-LT---ISDEELDE 434 (447)
T ss_pred ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc---C----CCCcEEEEeCC-cc---cCHHHHHH
Confidence 5543111 22333444311 1222 44667778899877432 1 12467999655 55 67999999
Q ss_pred HHHHHHHHHHH
Q 010008 460 IADFIHEGVEI 470 (520)
Q Consensus 460 la~~i~~~l~~ 470 (520)
..++|.++++.
T Consensus 435 ~l~il~~al~~ 445 (447)
T COG0160 435 GLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 320
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=4.8e-09 Score=111.11 Aligned_cols=321 Identities=14% Similarity=0.079 Sum_probs=173.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC-CCCCceeeecCChHHHHHHHHHhh-C-
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI-L- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs~A~~~~l~al-l- 180 (520)
.-.|.|.+|+...+.+. .. ....++. ++ ..++ ++ +++.+++... .+. .+..+|||+|+.+++... .
T Consensus 56 h~~p~v~~ai~~ql~~~-~~--~~~~~~~-~~--~~~~-la-~~l~~~~p~~~~~~---~~f~~sGseA~e~AlklAr~~ 124 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQF-TH--TAYQIVP-YA--SYVT-LA-ERINALAPIDGPAK---TAFFTTGAEAVENAVKIARAY 124 (421)
T ss_pred CCCHHHHHHHHHHHhhc-cc--ccccccC-Ch--HHHH-HH-HHHHHhCCCCCCce---EEEeCCcHHHHHHHHHHHHHh
Confidence 34678888888777542 11 1100011 11 1222 33 5666766431 221 244579999999887633 2
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCC--CCCCCHHHHHHHhhh----c
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVDYDMLEKTAIL----F 241 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-------------~~~~v~~~~d~~--~~~iD~d~le~~i~~----~ 241 (520)
....+|+...-.|.|.- .+. +++.+. .+..++++-... ....|++.+++.+.. .
T Consensus 125 tgr~~ii~~~~~yHG~t-~~~------~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~ 197 (421)
T PRK06777 125 TGRPGVIAFGGAFHGRT-LLT------MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPD 197 (421)
T ss_pred hCCCeEEEEcCCcCCcc-HHH------HhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCC
Confidence 22356887775543331 111 111110 001112221000 011246667777752 2
Q ss_pred CCcEEEEcCC-CCCC--CCC---HHHHHHHHHHhCCEEEEechhhcccccccccCCCC---C-cccEEEeccCccc-CCC
Q 010008 242 RPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGP 310 (520)
Q Consensus 242 ~pklIi~~~s-~~p~--~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~---~-~aDiv~~S~hK~l-~Gp 310 (520)
+..+||+... +..+ ..+ +++|+++|+++|+++|+|++|. |+...+.. ..+ . ..|+++ ++|.+ +|+
T Consensus 198 ~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~-~~~~~~~~~pDiv~--~sK~l~~G~ 273 (421)
T PRK06777 198 QVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKL-FAMEYYDVKPDLIT--MAKSLGGGM 273 (421)
T ss_pred ceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCch-hhhhhcCCCCCEEe--eehhhcCCC
Confidence 3556776532 1122 333 8999999999999999999965 65433321 111 1 367764 67988 567
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC----CC
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GY 386 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~----G~ 386 (520)
+.|++++++ ++.+.+.......+.+++.....+++ .+|+.+.+ ++..+++.++.++|.+.|++. ++
T Consensus 274 pigav~~~~------~i~~~~~~~~~~~T~~~~p~~~aaa~-a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~ 343 (421)
T PRK06777 274 PISAVVGRA------EVMDAPAPGGLGGTYAGNPLAVAAAL-AVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPA 343 (421)
T ss_pred ceEEEEEcH------HHHhccCCCCCCCCCCcCHHHHHHHH-HHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 889999987 67666654333334455444444443 46765543 345667777788888887662 21
Q ss_pred -EEecCCCCCeeEEEEecC--CCCCH----HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 387 -KLVSGGSDNHLVLVDLRP--MGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 387 -~v~~~gt~~~~~~vd~~~--~g~~~----~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
..+. +. .-++.+.+.. .+.+. ..+.+.|.+.||.+. |+.. + .+.+||..| ++ .+++++++
T Consensus 344 i~~vr-g~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~----~~~~--~-g~~lr~~pp-l~---i~~~~i~~ 410 (421)
T PRK06777 344 IVDIR-AR-GSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLL----SCGV--H-GNVIRFLYP-LT---IPDAQFSK 410 (421)
T ss_pred eEEec-Cc-eEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEe----ecCC--C-CCEEEEeCC-CC---CCHHHHHH
Confidence 1122 22 2233333321 11111 234444677999983 4321 1 258999855 43 56899999
Q ss_pred HHHHHHHHHH
Q 010008 460 IADFIHEGVE 469 (520)
Q Consensus 460 la~~i~~~l~ 469 (520)
+.+.|.+++.
T Consensus 411 ~~~~l~~~l~ 420 (421)
T PRK06777 411 ALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHh
Confidence 9999988763
No 321
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.31 E-value=1e-09 Score=123.71 Aligned_cols=274 Identities=13% Similarity=0.069 Sum_probs=170.2
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-C--CCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 219 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al-l--~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~ 219 (520)
.+..++++.|.+.. |.....++ .+-.+++++. . +++++|++++..|+...... . -...+.+++++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~---~---t~a~~~g~~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVL---H---TRAKPFGIEVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHH---H---HHHHhcCcEEEE
Confidence 45788999999863 33334443 3333455553 2 34589999887764332100 0 011222335544
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc
Q 010008 220 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 297 (520)
Q Consensus 220 ~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD 297 (520)
+ |++++++.+ ++..+++.+|++-+ ..|+++|.+++|++|++++++.-..+ ......|-+ |+|
T Consensus 184 ~---------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~a----l~ll~~Pge~GaD 247 (939)
T TIGR00461 184 V---------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMA----LTLLTPPGHYGAD 247 (939)
T ss_pred E---------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHH----hCCcCCHHHcCCc
Confidence 2 445565554 35677777887665 66999999999999999999753332 223334444 799
Q ss_pred EEEeccCccc-----CCCCceEEEeeCCCcchhhHHHhhccc------------CCCC-C----------CCCCh---HH
Q 010008 298 VVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNA------------VFPG-L----------QGGPH---NH 346 (520)
Q Consensus 298 iv~~S~hK~l-----~GprgG~I~~~~~~~~~~~l~~~i~~~------------~~p~-~----------~g~p~---~~ 346 (520)
|++++.+++. +||..|++.+++. +.+++.-. .|.. + -++.+ ..
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~------l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE------YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh------hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 9988777753 5888899999874 32221100 0000 0 11211 22
Q ss_pred HHHHHHHH--HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEc
Q 010008 347 TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLN 424 (520)
Q Consensus 347 ~iaala~a--l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~ 424 (520)
.+.|+.++ +..+...++++..+++..++.+|++.|.+.|++++.+. --.-+.+++. +.+.+++.+.|.+.||.++
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~-fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~ 398 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINKT-WFDTLTVKVG--NGISSELLKAAEEFNINLR 398 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-ccceEEEEeC--CCCHHHHHHHHHHCCCeee
Confidence 23333333 34444456788899999999999999999999987641 1112334442 1356788889999999986
Q ss_pred CCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 425 KNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 425 ~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
.. ..+.+++++...+| ++|++.+++.+.
T Consensus 399 ~~---------~~~~i~~s~~E~~t----~~di~~l~~~~~ 426 (939)
T TIGR00461 399 AV---------DTTTVGIALDETTT----KADVENLLKVFD 426 (939)
T ss_pred ec---------CCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence 41 23579999887776 799999999995
No 322
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=2.7e-09 Score=113.74 Aligned_cols=327 Identities=14% Similarity=0.105 Sum_probs=170.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AIL 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~---all 180 (520)
.-.|.|.+|+...+.+ +.. +.. ....++ ...+ ..+++.+++...... -.+..+||++|+.+++. ...
T Consensus 72 h~~p~v~~ai~~q~~~-~~~-~~~--~~~~~~---~~~~-la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t 141 (443)
T PRK06058 72 NSAPRVVEAVREQVAR-FTH-TCF--MVTPYE---GYVA-VAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYT 141 (443)
T ss_pred CCCHHHHHHHHHHHHh-ccC-ccc--cccCCH---HHHH-HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhh
Confidence 4578899888887754 211 000 001111 2222 335677776432111 12456899999998887 333
Q ss_pred CCCCEEEEcCCCCCccccccccc-------ccccc--ccccceEEEEEc--ccCC-CCCCCC--------HHHHHHHhhh
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMT-------PKRRV--SGTSIYFESMPY--RLDE-STGLVD--------YDMLEKTAIL 240 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~-------~~~~v--~~~g~~~~~v~~--~~d~-~~~~iD--------~d~le~~i~~ 240 (520)
..++|+..+..|.|.- .+... ..... ...+ ...+++ +.+. .....+ .+.+++.+..
T Consensus 142 -gr~~ii~~~~~yHG~t-~~al~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (443)
T PRK06058 142 -GRQAVVVFDHAYHGRT-NLTMALTAKSMPYKSGFGPFAPE--VYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGA 217 (443)
T ss_pred -CCCeEEEECCCcCcCh-HHHHhhcCCCcccccccCCCCCC--ceEcCCCcccccccccccchHHHHHHHHHHHHHhhCC
Confidence 3478988877653331 01000 00000 0001 011111 1110 000111 2233343332
Q ss_pred cCCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCccc-CCC
Q 010008 241 FRPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RGP 310 (520)
Q Consensus 241 ~~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l-~Gp 310 (520)
.+..+||+... ..++ .. -+++|+++|+++|+++|+|+.+. |+...|.. . .-+. ..|+++++ |.+ .|.
T Consensus 218 ~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~ 294 (443)
T PRK06058 218 DNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAGGL 294 (443)
T ss_pred CceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccCCC
Confidence 35677777532 1222 22 28999999999999999999864 54322211 0 0011 35888875 998 456
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEE
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL 388 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v 388 (520)
+.|++++++ ++.+.+......++.++......+|+ ++|+.+.+++ ..+++.+..++|.+.|++. .+.+
T Consensus 295 Pi~av~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 364 (443)
T PRK06058 295 PLSAVTGRA------EIMDAPHPGGLGGTYGGNPVACAAAL-AAIETIEEDD---LVARARQIEALMTDRLRALAAEDDR 364 (443)
T ss_pred ccEEEEEcH------HHHhhccCCCCCCCCCCCHHHHHHHH-HHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 678888887 66666654333333444444434443 3566654433 3455666677777777652 1233
Q ss_pred ec--CCCCCeeEEEEecCC--CC-C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 389 VS--GGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 389 ~~--~gt~~~~~~vd~~~~--g~-~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
+. .|. ..++.+.+... .. + ...+.+.|.+.||.+.. +. ++ ...||+..| ++ ++++|++++
T Consensus 365 i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~----~~--~~-~~~lr~~Pp-l~---~t~~~i~~~ 432 (443)
T PRK06058 365 IGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLT----CG--TY-GNVIRLLPP-LV---IGDELLREG 432 (443)
T ss_pred EEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEec----cC--CC-CCEEEEECC-Cc---cCHHHHHHH
Confidence 21 122 23333444221 11 1 23355566789999843 21 11 257999655 33 579999999
Q ss_pred HHHHHHHHH
Q 010008 461 ADFIHEGVE 469 (520)
Q Consensus 461 a~~i~~~l~ 469 (520)
++.++++++
T Consensus 433 ~~~l~~~l~ 441 (443)
T PRK06058 433 LDVLEAALA 441 (443)
T ss_pred HHHHHHHHH
Confidence 999998875
No 323
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.30 E-value=2.5e-10 Score=116.44 Aligned_cols=269 Identities=15% Similarity=0.236 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---CCC--C---CEEEEcCCCCCcccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRRV 208 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l~p--G---D~Vl~~~~~~~ghls~g~~~~~~~v 208 (520)
..++|..|...++.+|+.+.+..+. .++.||++..++.... .+. | -.++++...|.+ + .+..
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~--~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a-----~---eK~a 187 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGC--GTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA-----F---EKAA 187 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCc--cccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH-----H---HHHH
Confidence 4588999999999999999765432 2234457755444332 111 1 122322221111 1 1111
Q ss_pred ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHH-hCCEEEEechhhccccc
Q 010008 209 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVA 285 (520)
Q Consensus 209 ~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~-~g~~li~D~Ah~~gli~ 285 (520)
...+. +...+++++.++.+|+.++.+.+.+ ++.+++...++.|. ..|+++|.+++-+ .++.+++|++ .-|++.
T Consensus 188 ~yf~v--~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~-~GgFi~ 263 (491)
T KOG1383|consen 188 RYFEV--ELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDAC-LGGFIN 263 (491)
T ss_pred hhEEE--EEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeeccc-Cccccc
Confidence 22233 4455667777899999999999998 89999988888776 6789999999998 9999999987 445554
Q ss_pred c-cccC-CCCC----cccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhh--cccCCCC------CCCCChHHHHHH
Q 010008 286 A-SVVA-DPFK----YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI--NNAVFPG------LQGGPHNHTIGG 350 (520)
Q Consensus 286 ~-~~~~-~p~~----~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i--~~~~~p~------~~g~p~~~~iaa 350 (520)
. +... .+++ +.--++.++||.-..|.| |+++++... .+...+ ......| +.|+-..+++++
T Consensus 264 p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~----~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~ 339 (491)
T KOG1383|consen 264 PAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKE----LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAA 339 (491)
T ss_pred cccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccc----cccceEEEeccccCccccCcccccCCcccHHHH
Confidence 2 3222 2332 556788899998656777 888887742 111111 1111222 233334456777
Q ss_pred HHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCC
Q 010008 351 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 351 la~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
..++|-.+..++|.+..+++.++++.|.+.+++ .++.++... -..++-+.....+-.++...|.+.|..+|.-
T Consensus 340 ~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp---~vs~~~~~s~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 340 QWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP---LVSFILFGSNDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC---cEEEEEccCCccchhhhhHHHHhcCcCcccc
Confidence 777777676788999999999999999999988 688887652 2223333444566678999999999988653
No 324
>PRK12403 putative aminotransferase; Provisional
Probab=99.30 E-value=3.5e-09 Score=113.26 Aligned_cols=323 Identities=16% Similarity=0.113 Sum_probs=162.8
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC--
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~-g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all-- 180 (520)
.-.|.|.+|+...+.. +..+. .++. .++...++ .++++++++-..+. .+..+||++||.+++....
T Consensus 70 h~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~l----ae~L~~~~p~~~~~---v~f~~SGseA~e~AiklAr~~ 138 (460)
T PRK12403 70 YGRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIEL----SELLFSLLPGHYSH---AIYTNSGSEANEVLIRTVRRY 138 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCee---cccccCCHHHHHH----HHHHHHhCCCCcCE---EEEeCCcHHHHHHHHHHHHHH
Confidence 3468888888877753 32221 1222 22322233 36777787633221 3456899999998887652
Q ss_pred -----CCCCEEE-EcCCCCCccccccccccccccccccce-----------EEEEEcccC-CCCCC--------CCHHHH
Q 010008 181 -----KPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-ESTGL--------VDYDML 234 (520)
Q Consensus 181 -----~pGD~Vl-~~~~~~~ghls~g~~~~~~~v~~~g~~-----------~~~v~~~~d-~~~~~--------iD~d~l 234 (520)
++++.++ ...-.| ||.... .++.++.. +..++++.- ..... .+.+++
T Consensus 139 ~~~~g~~~r~~ii~~~~~y-----HG~t~~--~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 139 WQVLGKPQKKIMIGRWNGY-----HGSTLA--ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HHhhCCCCCcEEEEECCCc-----CcccHh--hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 3444443 333332 222110 11111110 111221110 00000 113556
Q ss_pred HHHhhh---cCCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEec
Q 010008 235 EKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 302 (520)
Q Consensus 235 e~~i~~---~~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S 302 (520)
++.+.. .+..+||+.. ++.+...+ +++++++|+++|+++|+|++| .|+--.|.. . .-+. ..|+++
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~-- 288 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI-GGFGRTGEWFAHEHFGFEPDTLS-- 288 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhhhhhcCCCCCeEE--
Confidence 555532 1344566652 22222344 899999999999999999998 343211210 0 0111 258887
Q ss_pred cCcccCCC--CceEEEeeCCCcchhhHHHhhcc--cC--CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHH-HHHH
Q 010008 303 THKSLRGP--RGGMIFFKKDPVLGVELESAINN--AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCR 375 (520)
Q Consensus 303 ~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~--~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~-~na~ 375 (520)
+.|.|+|. ..|.+++++ ++.+.+.. .. ..++.+++.. ..++..++|+.+.+++ ..+++. ++.+
T Consensus 289 ~gK~lggG~~Piga~v~~~------~i~~~~~~~~~~~~~~~T~~gnPl-~~Aaala~L~~i~~~~---l~~~~~~~~g~ 358 (460)
T PRK12403 289 IAKGLTSGYVPMGGLVLSK------RIAEALVEQGGVFAHGLTYSGHPV-AAAVAIANLKALRDEG---VVTRVKDDTGP 358 (460)
T ss_pred EcccccccccceEEEEECH------HHHHHHhcCCCccccCCCCCCCHH-HHHHHHHHHHHHHhcc---HHHHHHHHHHH
Confidence 45999643 345555665 55555432 11 2233344333 3333334677665433 345554 5666
Q ss_pred HHHHHHHH--CCCEEecCCC-CCeeEEEEecCCC-----CC-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEE
Q 010008 376 ALASRLVE--LGYKLVSGGS-DNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRI 442 (520)
Q Consensus 376 ~l~~~L~~--~G~~v~~~gt-~~~~~~vd~~~~g-----~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRi 442 (520)
+|.+.|++ ..+.++..-+ ...+.-+.+.... .. ...+...+.+.||.+... .+.+|+
T Consensus 359 ~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~~~l 428 (460)
T PRK12403 359 YLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----------LGRMIM 428 (460)
T ss_pred HHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----------CCEEEE
Confidence 77777654 1233222101 1223334442111 01 122344557899998421 135888
Q ss_pred ccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 443 GSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 443 g~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
..| ++ ++++|++++.+.+++++...
T Consensus 429 ~Pp-l~---it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 429 APA-LV---AGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred ECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 644 54 56999999999999998653
No 325
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.30 E-value=2.8e-09 Score=113.02 Aligned_cols=322 Identities=15% Similarity=0.079 Sum_probs=166.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC-CCCCCceeeecCChHHHHHHHHHhh--C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPANFEVYTAI--L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~-~~~~~~~~V~~~sGs~A~~~~l~al--l 180 (520)
.-.|.|.+|+...+......++. ++ .++ .. .+++ +++.+++.- ..+. .+..+|||+|+.+++.-. .
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~~~---~~-~~~--~~-~~la-~~l~~~~p~~~~~~---v~f~~sGseA~e~AlklAr~~ 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTCFM---VT-PYE--GY-VALA-EKLNRIAPGSGPKK---SVFFNSGAEAVENAVKIARSY 117 (420)
T ss_pred CCCHHHHHHHHHHHHhccCcccc---cc-CCh--HH-HHHH-HHHHHhCCCCCCCE---EEEeCCcHHHHHHHHHHHHHh
Confidence 45788888888777542111111 01 111 12 2233 456666632 1121 244689999999877632 2
Q ss_pred CCCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC----CCC----CHHHHHHHhh
Q 010008 181 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST----GLV----DYDMLEKTAI 239 (520)
Q Consensus 181 ~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-------------~~~~v~~~~d~~~----~~i----D~d~le~~i~ 239 (520)
....+|+...-.|.|.- .+. +++.+. .+..++++..... ... +++.+++.+.
T Consensus 118 tgr~~ii~~~~~yHG~t-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (420)
T TIGR00700 118 TGRPGVVAFDHGFHGRT-NMT------MALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFV 190 (420)
T ss_pred cCCCcEEEECCCcCCCc-HHH------HHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHH
Confidence 22356777765543321 010 111110 0111222210000 011 2456666653
Q ss_pred ----hcCCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-cccEEEeccCcc
Q 010008 240 ----LFRPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 306 (520)
Q Consensus 240 ----~~~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-~aDiv~~S~hK~ 306 (520)
..+..+||+..- ..++ .. .+++|+++|++||+++|+|+.+ .|+...+... ..+. ..|+++ ++|.
T Consensus 191 ~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~ 267 (420)
T TIGR00700 191 IDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKS 267 (420)
T ss_pred hhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eecc
Confidence 124456776521 1112 22 3899999999999999999984 4554333110 1111 367766 6799
Q ss_pred c-CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--
Q 010008 307 L-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-- 383 (520)
Q Consensus 307 l-~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-- 383 (520)
+ +|++.|++++++ ++.+.+.........++......++++ +++.+.+.++.+ ++.+..+.+.+.|++
T Consensus 268 l~~G~pig~v~~~~------~i~~~~~~~~~~~T~~~~pl~~aaa~a-~l~~l~~~~~~~---~~~~~g~~l~~~L~~l~ 337 (420)
T TIGR00700 268 LADGLPLSGVTGRA------EIMDAPAPGGLGGTYAGNPLACAAALA-VLAIIESEGLIE---RARQIGRLVTDRLTTLK 337 (420)
T ss_pred ccCCcceEEEEecH------HHHhhcCCCCcCCCCCcCHHHHHHHHH-HHHHHHhccHHH---HHHHHHHHHHHHHHHHH
Confidence 8 578889999987 676666543333334444444444443 566554444433 333334445555543
Q ss_pred --CC-CEEecCCCCCeeEEEEecCC--CC-C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCH
Q 010008 384 --LG-YKLVSGGSDNHLVLVDLRPM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 454 (520)
Q Consensus 384 --~G-~~v~~~gt~~~~~~vd~~~~--g~-~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~ 454 (520)
.+ +..+.+ . ..++++.+... .. + ...+.+.+.+.||.+ .|+.. + ...|||+.+.. +++
T Consensus 338 ~~~~~~~~vrg-~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i----~p~~~--f-~~~lRl~p~l~----~~~ 404 (420)
T TIGR00700 338 AVDPRIGDVRG-L-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLL----LTCGM--F-GNIIRFLPPLT----IGD 404 (420)
T ss_pred hhCCCEEEeec-c-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEE----eccCC--C-CCEEEEECCCC----cCH
Confidence 22 222222 2 23445544221 11 1 233455567899998 44321 1 36899986532 458
Q ss_pred HHHHHHHHHHHHHHH
Q 010008 455 KEFVAIADFIHEGVE 469 (520)
Q Consensus 455 ~d~~~la~~i~~~l~ 469 (520)
+++++.++.|.+++.
T Consensus 405 ~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 405 ELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 326
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.29 E-value=9.2e-09 Score=109.07 Aligned_cols=320 Identities=13% Similarity=0.113 Sum_probs=167.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
.-.|.|.+|+...+.+....++ .++ ..+| + .+++.++++...+. ....+||++|+.+++... .-.
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~~-------~~~--~~~~-l-a~~L~~~~~~~~~~---v~f~~SGsEA~e~AiklAr~~t 134 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTSYGL-------TSE--QEIL-F-AEELFSYLGLEDHK---IRFVSSGTEATMTAVRLARGIT 134 (433)
T ss_pred CCCHHHHHHHHHHHHhCCCCCC-------CCH--HHHH-H-HHHHHHhCCCCcCE---EEEeCchHHHHHHHHHHHHHhh
Confidence 3578888888887764321111 112 1222 3 35677777543221 244589999999887643 223
Q ss_pred C-CEEEEcCCCCCccccccccccccccccccceEEE--EEc---ccCCCC---CCCCHHHHHHHhhhc--CCcEEEEcC-
Q 010008 183 H-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES--MPY---RLDEST---GLVDYDMLEKTAILF--RPKLIIAGA- 250 (520)
Q Consensus 183 G-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~--v~~---~~d~~~---~~iD~d~le~~i~~~--~pklIi~~~- 250 (520)
| .+|+...-.|.|+-.. . .. .++..+..... ..+ +..+.. ..-|++++++.+..+ +..+||+..
T Consensus 135 gr~~ii~~~~~yHG~td~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 135 GRSIIIKFLGCYHGHADT-L-LQ--GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred CCCEEEEEcCccCCCCcc-c-Cc--ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 4 5677766544332100 0 00 11111110000 000 000000 113788888888643 345666652
Q ss_pred -CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccC-CCCceEEEeeCCC
Q 010008 251 -SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 321 (520)
Q Consensus 251 -s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~-GprgG~I~~~~~~ 321 (520)
++.+...+ +++|+++|++||+++|+|++| .|+ -.|.. ..-+. ..|+++ +.|.++ |..+|++++++
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~-- 284 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK-- 284 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH--
Confidence 22222333 569999999999999999998 465 22210 00011 368876 569996 44578899988
Q ss_pred cchhhHHHhhcc--cCCC-CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CCCEEecCCCC
Q 010008 322 VLGVELESAINN--AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSD 394 (520)
Q Consensus 322 ~~~~~l~~~i~~--~~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G~~v~~~gt~ 394 (520)
++.+.+.. ..+. ++.+++.. .+++...+|+.+.+++ ..+++.++.++|.+.|++ .|+++...+ .
T Consensus 285 ----~i~~~~~~~~~~~~~~T~~g~p~-~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~ 355 (433)
T PRK00615 285 ----SIMDHLAPEGTIFQAGTLSGNPL-AMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-Y 355 (433)
T ss_pred ----HHHhhhcCCCCcccCCCCcccHH-HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-e
Confidence 66666532 1121 22233333 3444334677665433 355566666666555543 466543221 1
Q ss_pred CeeEEEEecCCCC---------C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 395 NHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 395 ~~~~~vd~~~~g~---------~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
.-++.+.+..... + ...+.+.|.+.||.+.....| ...+ +..++++|++++++
T Consensus 356 G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-------~~~l--------s~~ht~~did~~~~ 420 (433)
T PRK00615 356 GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE-------ASFL--------SSAHSMENLDYAQN 420 (433)
T ss_pred ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc-------ccce--------ecCCCHHHHHHHHH
Confidence 2233334422110 1 124667777899998432111 1112 22367999999999
Q ss_pred HHHHHHHHH
Q 010008 463 FIHEGVEIT 471 (520)
Q Consensus 463 ~i~~~l~~~ 471 (520)
++++++...
T Consensus 421 a~~~~~~~~ 429 (433)
T PRK00615 421 VLIDSLEKV 429 (433)
T ss_pred HHHHHHHHH
Confidence 999998753
No 327
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.28 E-value=6e-09 Score=110.08 Aligned_cols=323 Identities=14% Similarity=0.109 Sum_probs=166.2
Q ss_pred CChHHHHHHHhhhhhcc-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCC-CCceeeecCChHHHHHHHHHhh--
Q 010008 104 FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAI-- 179 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~-y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~-~~~~~V~~~sGs~A~~~~l~al-- 179 (520)
.-.|.|.+|+...+.+. +..+. .+ .++ ...++ .+++.++...... ...+.+..+||++|+..++...
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~~~---~~--~~~---~~~~l-ae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~ 121 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIHSL---DM--ATE---AKREF-LETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARK 121 (412)
T ss_pred CCCHHHHHHHHHHHhhccceecc---cc--CcH---HHHHH-HHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhh
Confidence 45788888888777532 21111 11 111 11222 2455555321110 0002222479999999887643
Q ss_pred CCCCCEEEEcCCCCCccccccccccccccccccce----------EEEEEcccCC-CC-CCCCHHHHHHHhhhc-----C
Q 010008 180 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDE-ST-GLVDYDMLEKTAILF-----R 242 (520)
Q Consensus 180 l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~----------~~~v~~~~d~-~~-~~iD~d~le~~i~~~-----~ 242 (520)
.....+|+...-.|.|.- .+ .++.++.. ...+.+|... .. ..-|++.+++.+.++ +
T Consensus 122 ~tgr~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 194 (412)
T TIGR02407 122 VTGRSNVVSFTNAFHGMT-LG------SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDL 194 (412)
T ss_pred hcCCCeEEEECCCcCCch-HH------HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCc
Confidence 223367888776543321 11 01111100 0112222110 00 012466788777532 3
Q ss_pred CcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccC--CCC
Q 010008 243 PKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPR 311 (520)
Q Consensus 243 pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~--Gpr 311 (520)
+.+||+..- +..+ ..-+++|+++|+++|+++|.|+.+. |+--.|.. . .... ..|++++| |++. |.+
T Consensus 195 ~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~p 271 (412)
T TIGR02407 195 PAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLP 271 (412)
T ss_pred eEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEec--hhccCCccc
Confidence 466776522 1122 2248899999999999999999964 43111110 0 0011 36888755 9984 556
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHH----CC-
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASRLVE----LG- 385 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~i~~na~~l~~~L~~----~G- 385 (520)
.|++++++ ++ ..+.........++... ..++..++++. +.+. ++.+++.+..+++.+.|+. .+
T Consensus 272 igav~~~~------~~-~~~~~~~~~~T~~gnpl-~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~ 340 (412)
T TIGR02407 272 LALTLIKP------EL-DVWKPGEHNGTFRGNNL-AFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEYPE 340 (412)
T ss_pred eeEEEEch------hh-hccCCCccCCCCCccHH-HHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 79999987 44 33332222222333223 33332334664 4333 3345555556666666654 22
Q ss_pred CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHH
Q 010008 386 YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 386 ~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
+.....+ ...+.++.+... .....+.+.|.+.||.+... . .....||+..+.. ++++|++++.+.++
T Consensus 341 ~~~~vrg-~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~----~---~~~~~lr~~p~l~----~t~~~i~~~~~~l~ 407 (412)
T TIGR02407 341 LIKQVRG-RGLMQGIECGDG-DLAGKIAKAAFENGLIIETS----G---PNDEVIKLLPPLT----IDEETLQQGLDILE 407 (412)
T ss_pred ceEeeec-ceeEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEECCCC----CCHHHHHHHHHHHH
Confidence 2111111 234456666431 12356777888899998531 1 1245799976643 56999999999999
Q ss_pred HHHH
Q 010008 466 EGVE 469 (520)
Q Consensus 466 ~~l~ 469 (520)
+++.
T Consensus 408 ~~l~ 411 (412)
T TIGR02407 408 QAVE 411 (412)
T ss_pred HHHh
Confidence 8874
No 328
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=3.1e-09 Score=113.24 Aligned_cols=323 Identities=15% Similarity=0.081 Sum_probs=167.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 183 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 183 (520)
-.|.|.+|+...+.... . ....++ .++... ...+++++++.-...+ -....+||++|+.+++... .-.|
T Consensus 59 ~~p~v~~Ai~~ql~~~~-~--~~~~~~-~~~~~~----~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tg 128 (445)
T PRK08593 59 APPRVVEAIKAQADKFI-H--YTPAYM-YHEPLV----RLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTG 128 (445)
T ss_pred CCHHHHHHHHHHHHhcc-C--cccccc-CCHHHH----HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 46888888877765321 1 110111 122222 2335677776432111 1234589999999888642 1123
Q ss_pred -CEEEEcCCCCCcccccccccccccccccc-------------ceEEEEEcccCCC--CCCCC-------HHHHHHHhhh
Q 010008 184 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES--TGLVD-------YDMLEKTAIL 240 (520)
Q Consensus 184 -D~Vl~~~~~~~ghls~g~~~~~~~v~~~g-------------~~~~~v~~~~d~~--~~~iD-------~d~le~~i~~ 240 (520)
.+|+..+-.|.|.. .+. +++.+ ..+..++++-... ....+ ++++++.+..
T Consensus 129 r~~ii~~~~~YHG~t-~~a------ls~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK08593 129 RPYIISFTNAYHGST-YGS------LSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK 201 (445)
T ss_pred CCeEEEECCCcCCCc-HHH------HhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 46777765543321 110 11111 0012223221000 00111 2344444432
Q ss_pred ----cCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-cccEEEeccCccc
Q 010008 241 ----FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 307 (520)
Q Consensus 241 ----~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-~aDiv~~S~hK~l 307 (520)
.+..+||+... ...+ ..+ +++++++|+++|+++|+|++|. |+-..|... .-+. ..|++++ .|.+
T Consensus 202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t~--gK~l 278 (445)
T PRK08593 202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMSF--GKSL 278 (445)
T ss_pred hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEeee--cccc
Confidence 24567777632 2222 233 8999999999999999999963 332122110 0011 2577754 5998
Q ss_pred C-CCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--
Q 010008 308 R-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-- 384 (520)
Q Consensus 308 ~-GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-- 384 (520)
+ |.++|++++++ ++.+.+.......+.+++... .++..++|+.+.++ +..+++.+..++|.+.|++.
T Consensus 279 ~~G~p~gav~~~~------~i~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 348 (445)
T PRK08593 279 AGGMPMSAIVGRK------EIMESLEAPAHLFTTGANPVS-CAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVS 348 (445)
T ss_pred cCCcccEEEEEcH------HHHhhhccCCCCCCCCCCHHH-HHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHh
Confidence 5 56689999987 676666432222233443333 33333456666443 34566666677777777652
Q ss_pred CCEEecC--CCCCeeEEEEecCC---CC-C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHH
Q 010008 385 GYKLVSG--GSDNHLVLVDLRPM---GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 455 (520)
Q Consensus 385 G~~v~~~--gt~~~~~~vd~~~~---g~-~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~ 455 (520)
.+.++.. |. ..+.-+.+... .. + ...+...|.+.||.+... ....+|+..+.. ++++
T Consensus 349 ~~~~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------~~~~lr~~p~l~----~t~~ 414 (445)
T PRK08593 349 KYNFVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------AGNVLRFQPPLV----ITYE 414 (445)
T ss_pred cCCcEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------CCCEEEEECCCc----cCHH
Confidence 2333221 11 12222333211 11 1 234667777899998421 135799976633 5699
Q ss_pred HHHHHHHHHHHHHHHH
Q 010008 456 EFVAIADFIHEGVEIT 471 (520)
Q Consensus 456 d~~~la~~i~~~l~~~ 471 (520)
|++++.+.+++++...
T Consensus 415 ~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 415 QLDTALNTIEQAFTAL 430 (445)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998753
No 329
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.27 E-value=7.4e-12 Score=126.01 Aligned_cols=245 Identities=18% Similarity=0.231 Sum_probs=54.3
Q ss_pred CCCCChHHHHHHHhhhhhcc----C--CCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 010008 101 SENFTSRAVMEAVGSCLTNK----Y--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 174 (520)
Q Consensus 101 sen~~~~~V~ea~~s~l~~~----y--~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~ 174 (520)
+-.++++.+.+++.....+. | ..|-.|.|| +.++ +.+++++|++.. +.+++.+.|++.
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~L 77 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVLL 77 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccc-------cccc----cccccccccccc-----cccccccccccc
Confidence 33467788888876554322 1 114444443 2333 567889999864 223666688888
Q ss_pred HHHhhCCCCCEEEEcCC---CCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEc-C
Q 010008 175 VYTAILKPHDRIMGLDL---PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-A 250 (520)
Q Consensus 175 ~l~all~pGD~Vl~~~~---~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~-~ 250 (520)
++.++. +|.+|++..- +.||.+. . ...+..+|. ..+.++.. ..-.+++++++|++ +|.+|+-- .
T Consensus 78 ~l~~la-~~~EvIvsRGelVeiGgsFR--i---p~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~ 145 (367)
T PF03841_consen 78 ALNTLA-KGKEVIVSRGELVEIGGSFR--I---PDVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVHT 145 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc-cccccccccccccccccccc--c---ccccccccc--cccccccc---cccccccccccccc-cccccccccc
Confidence 888775 4667776532 2343321 0 012344554 55565532 34456777889988 88877544 3
Q ss_pred CCCC-----CCCCHHHHHHHHHHhCCEEEEechhhccccc----cccc--CC---CCC-cccEEEeccCcccCCCCceEE
Q 010008 251 SAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVA----ASVV--AD---PFK-YCDVVTTTTHKSLRGPRGGMI 315 (520)
Q Consensus 251 s~~p-----~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~----~~~~--~~---p~~-~aDiv~~S~hK~l~GprgG~I 315 (520)
|||- ...+++++.++|++||+++++|.+ +|... .+.. ++ .+. ++|+|+||..|-|.||+.|+|
T Consensus 146 Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI 223 (367)
T PF03841_consen 146 SNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGII 223 (367)
T ss_dssp ---------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEE
T ss_pred cccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEE
Confidence 5552 267899999999999999999985 44331 1211 11 122 899999999999999999999
Q ss_pred EeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCch-----------hHHHHHHHHHHHHHHHHHHHH
Q 010008 316 FFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 316 ~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~i~~na~~l~~~L~~ 383 (520)
++++ ++.+++++.- ...+- ..-..++++..+|+....++ +..-.+.+.++++.|...|..
T Consensus 224 ~Gkk------~lI~~lk~~pl~Ralr--vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 224 VGKK------ELIEKLKKHPLGRALR--VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp EEEH------HHHHHHHHHHHTTT-B----HHHHHHHHHHHHH-------------------------------------
T ss_pred EeCH------HHHHHHhhCCCcceEe--eCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 9999 7888775431 11111 12346777877777554311 122345556667777776655
No 330
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.26 E-value=9.1e-09 Score=109.20 Aligned_cols=331 Identities=15% Similarity=0.123 Sum_probs=167.4
Q ss_pred CChHHHHHHHhhhhhc-cCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCC--CCCCceeeecCChHHHHHHHHHhh-
Q 010008 104 FTSRAVMEAVGSCLTN-KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI- 179 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~-~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~--~~~~~~~V~~~sGs~A~~~~l~al- 179 (520)
.-.|.|.+|+...+.. .+..+. . +. ++ ...+++ +++.+++..+ .+.. +.+..+||++|+..++...
T Consensus 55 h~~p~v~~ai~~ql~~~~~~~~~---~-~~-~~---~~~~la-e~l~~~~~~~~~~~~~-~~f~~~sGseA~e~AlklAr 124 (425)
T PRK09264 55 HNNPVLKQALIDYLQRDGITHGL---D-MH-TT---AKREFL-ETFEETILKPRGLDYK-VQFTGPTGTNAVEAALKLAR 124 (425)
T ss_pred CCCHHHHHHHHHHHHhccccccc---c-cC-cH---HHHHHH-HHHHHhhcCCcCCCce-EEEeCCCHHHHHHHHHHHHH
Confidence 3468888888777653 222111 1 11 11 112222 4555554222 1101 2222369999999887643
Q ss_pred -CCCCCEEEEcCCCCCccccccccc------cccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc-----CCcEEE
Q 010008 180 -LKPHDRIMGLDLPHGGHLSHGFMT------PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLII 247 (520)
Q Consensus 180 -l~pGD~Vl~~~~~~~ghls~g~~~------~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~-----~pklIi 247 (520)
.....+|+...-.|.|.- .+... .+.........+..++++.......-|++++++.+... +..+||
T Consensus 125 ~~tgr~~ii~~~~~yHG~t-~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi 203 (425)
T PRK09264 125 KVTGRTNIVAFTNGFHGMT-LGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVI 203 (425)
T ss_pred HhcCCCeEEEECCccCCcc-HHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEE
Confidence 222357887765543321 11000 00000000001122232210000012677888887642 245666
Q ss_pred EcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccC--CCCceEEE
Q 010008 248 AGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIF 316 (520)
Q Consensus 248 ~~~-s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~--GprgG~I~ 316 (520)
+.. ....+ ...+++|+++|++||+++|+|++|. |+.-.|.. . ..+. ..|++++| |.|. |-+.|+++
T Consensus 204 ~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~~--K~l~~~G~pigav~ 280 (425)
T PRK09264 204 VETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTLS--KSISGYGLPMALVL 280 (425)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEec--cccCCCccceEEEE
Confidence 652 11222 2258999999999999999999975 43211110 0 0011 35887664 9984 44568898
Q ss_pred eeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEE-ec--C
Q 010008 317 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL-VS--G 391 (520)
Q Consensus 317 ~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v-~~--~ 391 (520)
+++ ++ ..+.........++......+++ .++++.... .+..+++.++.++|.+.|++. .+.. .. .
T Consensus 281 ~~~------~i-~~~~~~~~~~T~~gnp~~~aaa~-a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vr 350 (425)
T PRK09264 281 IKP------EL-DVWKPGEHNGTFRGNNLAFVTAT-AALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKYPGLGAEVR 350 (425)
T ss_pred Ech------hh-hccCCCccCCCCCCCHHHHHHHH-HHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhCCCceecce
Confidence 887 44 23322222222333223333332 345322211 234566666777777776552 2221 11 1
Q ss_pred CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 392 GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 392 gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+ ...+.++.+... .....+.+.|.+.||.+... . .....||++.+.. ++++|++++.+.+.+++...
T Consensus 351 g-~Gl~~~i~l~~~-~~~~~l~~~~~~~Gv~~~~~----~---~~~~~lr~~p~l~----~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 351 G-RGMMQGIDFGDG-ELAGKIAAEAFENGLIIETS----G---PEDEVVKLLPPLT----IDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred e-cccEEEEEecCh-HHHHHHHHHHHHCCCEEecc----C---CCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 2 223445555421 12345777788899998431 1 1236799976533 45899999999999998753
No 331
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.26 E-value=1.1e-09 Score=114.75 Aligned_cols=292 Identities=23% Similarity=0.267 Sum_probs=180.3
Q ss_pred HHHHHHcCCCCCCCceeeecCChHHH---HHHHHHhhCC---CCCE--EEEcCCCCCccccccccccccccccccceEEE
Q 010008 146 KRALAAFNLDENKWGVNVQPLSGSPA---NFEVYTAILK---PHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 217 (520)
Q Consensus 146 ~~~~~lfg~~~~~~~~~V~~~sGs~A---~~~~l~all~---pGD~--Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~ 217 (520)
+++++..|.|. +.+||.||+++ -..++++.+. .|.+ .|++--.||-... ...+.| .++
T Consensus 589 ~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Mag--mkv 654 (1001)
T KOG2040|consen 589 KDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAG--MKV 654 (1001)
T ss_pred HHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcC--CEE
Confidence 78999999986 58999999854 4456666642 3333 4444434443321 223455 477
Q ss_pred EEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCC
Q 010008 218 MPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 293 (520)
Q Consensus 218 v~~~~d~~~~~iD~d~le~~i~~~~p--klIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~ 293 (520)
++++.+ .+|.||+.+|++.+.+++- .++.+.+|+.-+ ..+++.++++.++||--|..|+|.--..+ |+ -.|-
T Consensus 655 vpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV--Gl-c~pG 730 (1001)
T KOG2040|consen 655 VPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV--GL-CRPG 730 (1001)
T ss_pred EEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcccee--cc-cCCc
Confidence 787777 5799999999999887644 356666666444 55799999999999999999987432222 11 1222
Q ss_pred C-cccEEEeccCcccC------CCCceEEEeeCCCcchhhHHHhhcc--cCCC----------CCCCCC-hHHHHHHHHH
Q 010008 294 K-YCDVVTTTTHKSLR------GPRGGMIFFKKDPVLGVELESAINN--AVFP----------GLQGGP-HNHTIGGLAV 353 (520)
Q Consensus 294 ~-~aDiv~~S~hK~l~------GprgG~I~~~~~~~~~~~l~~~i~~--~~~p----------~~~g~p-~~~~iaala~ 353 (520)
. |+|+.--.+||||+ ||..|-|-+++. ++..+-. .+.+ .....| ....|..+..
T Consensus 731 d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H------LapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISw 804 (1001)
T KOG2040|consen 731 DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISW 804 (1001)
T ss_pred cccccceeecccceeeecCCCCCCCCCccchhhh------ccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHH
Confidence 2 78999999999984 343355655552 2221110 0000 000011 0112333333
Q ss_pred H-HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecC---CCCCeeEEEEecCC----CCCHHHHHHHHhhcCeEEcC
Q 010008 354 C-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG---GSDNHLVLVDLRPM----GIDGARVEKILDMASITLNK 425 (520)
Q Consensus 354 a-l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~---gt~~~~~~vd~~~~----g~~~~~~~~~L~~~gI~v~~ 425 (520)
| ++.+...++++-.+-..-|+.+++++|+.. ++++.. +...|-+++|++++ |+...++.++|.++|...-.
T Consensus 805 aYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPT 883 (1001)
T KOG2040|consen 805 AYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPT 883 (1001)
T ss_pred HHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCc
Confidence 3 455555566666677788999999999874 555432 34567778898764 57778899999999987543
Q ss_pred CCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHH
Q 010008 426 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITL 472 (520)
Q Consensus 426 ~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~ 472 (520)
-+.| .++.+-|-. |..-+.+|++++++++-.+-+...
T Consensus 884 mswP------V~gtLMIEP----TESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 884 MSWP------VAGTLMIEP----TESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred cccc------cCCceEecc----CccccHHHHHHHHHHHHHHHHHHH
Confidence 3333 455555532 223456777777777655544333
No 332
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.26 E-value=7.7e-09 Score=110.11 Aligned_cols=322 Identities=17% Similarity=0.124 Sum_probs=167.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+ ...+.. +...++. .. ...+++.+++.-..+. ....+|||+|+.+++....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~~---~~-~la~~l~~~~p~~~~~---v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHPK---AF-ELANRIAEIAPGGLNH---VFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCHH---HH-HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 4578888888777653 211111 1111221 12 2335677776322221 2446899999998876321
Q ss_pred ----CC-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CCC--------CHHH
Q 010008 181 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GLV--------DYDM 233 (520)
Q Consensus 181 ----~p-GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~~--~~i--------D~d~ 233 (520)
++ ..+|+...-.|.|. +.+ .+++.|. .+..++++.+... +.. +.++
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~-t~g------als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGV-GFG------GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCc-cHh------hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 12 25788887655332 111 0111110 0112222211000 100 2457
Q ss_pred HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhh-cccccccccCCCCC-cccEEEec
Q 010008 234 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT 302 (520)
Q Consensus 234 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~-~gli~~~~~~~p~~-~aDiv~~S 302 (520)
+++++... +..+||+.. +..+...+ +++|+++|+++|+++|+|++|. .|-........-+. ..|++++
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeee-
Confidence 77777532 344566652 22222445 8999999999999999999983 33221111000011 3688755
Q ss_pred cCcccCC--CCceEEEeeCCCcchhhHHHhhccc------C-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 303 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 303 ~hK~l~G--prgG~I~~~~~~~~~~~l~~~i~~~------~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
.|.|.| -..|.+++++ ++.+.+... . ..++.+++.. .+++...+|+.+.+++ ..+++.++
T Consensus 283 -gK~l~gG~~P~gav~~~~------~i~~~~~~~~~~~~~~~~~~T~~g~pl-~~aaa~a~L~~l~~~~---l~~~~~~~ 351 (442)
T PRK13360 283 -AKGLTNGAIPMGAVFVSS------EIHDAFMQGPEAGIEFFHGYTYSGHPL-ACAAALATLDLYEREG---LLTRAARL 351 (442)
T ss_pred -eeccccCccceEEEEEcH------HHHHHhhcCCccccccccCCCCCCCHH-HHHHHHHHHHHHHhCC---HHHHHHHH
Confidence 599964 2345566666 555544321 1 1223344333 3444444677665443 45666667
Q ss_pred HHHHHHHHHHCC-CEEecC--CCCCeeEEEEecCC--CC--CHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCC
Q 010008 374 CRALASRLVELG-YKLVSG--GSDNHLVLVDLRPM--GI--DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 446 (520)
Q Consensus 374 a~~l~~~L~~~G-~~v~~~--gt~~~~~~vd~~~~--g~--~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~ 446 (520)
.++|.+.|++.+ +..+.. |. ..+.-+.+.+. +. ....+.+.|.+.||.+... ...+|+..+.
T Consensus 352 g~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------~~~lr~~Ppl 420 (442)
T PRK13360 352 APYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----------GDILALSPPL 420 (442)
T ss_pred HHHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------CCEEEEeCCC
Confidence 777878776532 322221 11 11222233221 11 1245666778899998431 2469997553
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+ ++++|++++.+.+.++++.
T Consensus 421 -~---~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 421 -I---IEEAQIDELFDILAQALKE 440 (442)
T ss_pred -c---cCHHHHHHHHHHHHHHHHH
Confidence 3 5699999999999998853
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.26 E-value=3.6e-09 Score=112.06 Aligned_cols=320 Identities=15% Similarity=0.101 Sum_probs=172.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+.. ....+ . + .++ ...++ .+++.+++....+. .....|||+|+.+++....
T Consensus 59 h~~p~i~~Ai~~q~~~~~-~~~~~-~-~-~~~---~~~~l-a~~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~~ 127 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMS-HVMFG-G-I-THP---PAIEL-CRKLVAMTPQPLEC---VFLADSGSVAVEVAMKMALQYW 127 (428)
T ss_pred CCCHHHHHHHHHHHhhcC-Ccccc-c-c-CCH---HHHHH-HHHHHhhCCCCcCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 346888888877765321 11110 0 0 112 12222 35666666432221 2446899999998876432
Q ss_pred ----CCCCEEEEcCCCCCccccccccccccccccccc------e-------EEEEEcccCCCC--C-CCCHHHHHHHhhh
Q 010008 181 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------Y-------FESMPYRLDEST--G-LVDYDMLEKTAIL 240 (520)
Q Consensus 181 ----~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------~-------~~~v~~~~d~~~--~-~iD~d~le~~i~~ 240 (520)
....+|+...-.|.|. +.+ .++..+. . +..++++..... . .-|++++++.++.
T Consensus 128 ~~~g~~r~kii~~~~~yHG~-t~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 200 (428)
T PRK07986 128 QAKGEPRQRFLTLRHGYHGD-TFG------AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA 200 (428)
T ss_pred HhcCCCCcEEEEECCCcCCC-cHh------hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence 2236788887655332 111 0111110 0 011121110000 0 1256778877764
Q ss_pred c--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccC
Q 010008 241 F--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR 308 (520)
Q Consensus 241 ~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~ 308 (520)
. +..+||+.. ...++ ...+++|+++|+++|+++|+|++| .|+-..|.. . .-+. ..|+++ +.|.+.
T Consensus 201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~ 277 (428)
T PRK07986 201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALT 277 (428)
T ss_pred CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhh
Confidence 2 334566643 23333 123899999999999999999998 664222211 0 0011 358886 569985
Q ss_pred CC--CceEEEeeCCCcchhhHHHhhcccC-----CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Q 010008 309 GP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 381 (520)
Q Consensus 309 Gp--rgG~I~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L 381 (520)
|. ..|.+++++ ++.+.+.... ...+.+++ ....++...+|+.+.+.+ ..+++.++.++|.+.|
T Consensus 278 gG~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~g~-p~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l 347 (428)
T PRK07986 278 GGTMTLSATLTTR------EVAETISNGEAGCFMHGPTFMGN-PLACAVANASLSLLESGD---WQQQVAAIEAQLREEL 347 (428)
T ss_pred CCcccCcchhchH------HHHHHhhcCCCCccccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHH
Confidence 32 345666776 5666554311 12233443 333333334577665433 4666777777888887
Q ss_pred HHC-CCEEecC--CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHH
Q 010008 382 VEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 382 ~~~-G~~v~~~--gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
++. .+..+.. | ...+..+.+... .....+.+.|.+.||.+... ...||+..| ++ ++++|++
T Consensus 348 ~~l~~~~~i~~vRg-~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~~~----------g~~i~~~Pp-l~---it~~ei~ 411 (428)
T PRK07986 348 APLRDAPMVADVRV-LGAIGVVETTRP-VNMAALQRFFVEQGVWIRPF----------GKLIYLMPP-YI---ILPEQLQ 411 (428)
T ss_pred HHHhcCCCEEeEec-cceEEEEEeCCc-ccHHHHHHHHHHCCcEEEec----------CCEEEEeCC-CC---CCHHHHH
Confidence 763 2332321 1 123444445322 23456778888999998421 147999644 44 5699999
Q ss_pred HHHHHHHHHHHH
Q 010008 459 AIADFIHEGVEI 470 (520)
Q Consensus 459 ~la~~i~~~l~~ 470 (520)
++.+.+.+++..
T Consensus 412 ~~~~~l~~~l~~ 423 (428)
T PRK07986 412 RLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHhh
Confidence 999999998863
No 334
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=8.7e-09 Score=109.95 Aligned_cols=325 Identities=13% Similarity=0.079 Sum_probs=171.6
Q ss_pred ccceEecCCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCCh
Q 010008 94 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 168 (520)
Q Consensus 94 ~~i~Liasen-----~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sG 168 (520)
..|+++.+-. .-.|.|.+|+...+......+++ ++ .+....+++.++++.+. + ...+||
T Consensus 76 ~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~-------~~----~~~~lAe~l~~~~~~~~----v-~F~nSG 139 (453)
T PRK07046 76 RYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLP-------SE----DAAWVGEELARRFGLPY----W-QVATTA 139 (453)
T ss_pred EEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCC-------CH----HHHHHHHHHHHHhCCCE----E-EEECCH
Confidence 3466654321 34689999998887654322222 12 22224467777776442 2 346899
Q ss_pred HHHHHHHHHhh--CCCCCEEEEcCCCCCccccccccc--cccc---cccccceE----EEEEcccCCCCCCCCHHHHHHH
Q 010008 169 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMT--PKRR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKT 237 (520)
Q Consensus 169 s~A~~~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~--~~~~---v~~~g~~~----~~v~~~~d~~~~~iD~d~le~~ 237 (520)
|+|+..++... ....++|+...-.|.|+....... .... ....|... ..+.++ .-|++.+++.
T Consensus 140 tEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~ 213 (453)
T PRK07046 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAA 213 (453)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHH
Confidence 99999887643 223467887775543331000000 0000 00111100 011111 1378999988
Q ss_pred hhhcCCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcccC-C
Q 010008 238 AILFRPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-G 309 (520)
Q Consensus 238 i~~~~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~l~-G 309 (520)
+...+..+||+..- .+.+ .. -+++++++|+++|+++|.|+.+..+.-..+. ..-+. ..|++++ .|.+. |
T Consensus 214 l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t~--gK~lggG 290 (453)
T PRK07046 214 LADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAHGLEPDFLVV--GKPIAGG 290 (453)
T ss_pred hCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHhCCCccceee--hhhhcCC
Confidence 85435667777622 2222 22 2799999999999999999997522111121 11011 3688875 59985 4
Q ss_pred CCceEEEeeCCCcchhhHHHhhccc---------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNA---------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~---------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~ 380 (520)
...|.+++++ ++.+.+... ...++.++.... +++..+.|+.+.+++ ..+++.+..+.|.+.
T Consensus 291 ~Pi~av~g~~------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~-~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~ 360 (453)
T PRK07046 291 VPCAVYGFSA------ELAERAQAAKASAPPGHSGIGTTLSANALA-MAAMRATLAEVMTEA---AYAHMLALAARLAAG 360 (453)
T ss_pred CcceeeeehH------HHHHHHhhccccCCCCCceeCCCCcccHHH-HHHHHHHHHHHhccc---HHHHHHHHHHHHHHH
Confidence 4468888887 566655421 011222333333 333333566665443 345555556667666
Q ss_pred HHH----CCCEEecCCCCCeeEEEEecCCC----------CCH---HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEc
Q 010008 381 LVE----LGYKLVSGGSDNHLVLVDLRPMG----------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIG 443 (520)
Q Consensus 381 L~~----~G~~v~~~gt~~~~~~vd~~~~g----------~~~---~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig 443 (520)
|++ .++.....+... ++.+.+.... .+. ..+...|.+.||.+. |. ...++++
T Consensus 361 L~~l~~~~~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~----~~------~~~~~~~ 429 (453)
T PRK07046 361 LRAVIARHGLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLIT----PF------HNMMLVC 429 (453)
T ss_pred HHHHHHhCCCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEe----cc------cCcEEEe
Confidence 654 354322111111 2222221110 011 234455667899984 21 1346776
Q ss_pred cCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 444 SPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 444 ~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.+ ++++|++++.+++++++..
T Consensus 430 p~------~t~~did~~~~~~~~~l~~ 450 (453)
T PRK07046 430 PA------TTAADVDRLVAAFDACLGE 450 (453)
T ss_pred CC------CCHHHHHHHHHHHHHHHHH
Confidence 43 5689999999999998864
No 335
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.25 E-value=7.1e-09 Score=110.86 Aligned_cols=325 Identities=16% Similarity=0.140 Sum_probs=168.1
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.+....+.. .+. ++ . +....+++.+++.....+ -....+|||+|+.+++... ..
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~~~--~~~--~~---~-~~~la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~t 139 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTGFN--VMM--YE---P-YIELAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYT 139 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcccc--ccc--cH---H-HHHHHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHh
Confidence 35788999988877643211111 111 11 1 222335677777532211 1245689999999887643 22
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCC--CCCCCC-------HHHHHHHhh
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVD-------YDMLEKTAI 239 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-------------~~~~v~~~~d~--~~~~iD-------~d~le~~i~ 239 (520)
-..+|+...-.|.|.-. + .+++.+. .+..++++... ..+..+ .+.+++.+.
T Consensus 140 gr~~ii~~~~~yHG~t~-~------~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (451)
T PRK06918 140 KRQGIISFSRGFHGRTL-M------TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFI 212 (451)
T ss_pred CCCcEEEECCCcCccch-h------hhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHH
Confidence 23567777655433210 1 0111110 01112222100 001100 123343331
Q ss_pred ----hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCc
Q 010008 240 ----LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHK 305 (520)
Q Consensus 240 ----~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK 305 (520)
..+.-+||+... ..++ ...+++|+++|+++|+++|+|+.+ .|+...+.. .++. ..|++ |++|
T Consensus 213 ~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK 288 (451)
T PRK06918 213 SEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSK 288 (451)
T ss_pred hhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeeh
Confidence 123456666521 1112 223889999999999999999984 455433321 1121 25755 5679
Q ss_pred cc-CCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC
Q 010008 306 SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 384 (520)
Q Consensus 306 ~l-~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~ 384 (520)
.+ +|.|.|++++++ ++.+.+.........+++.....++++ +++.+.+.++.+ ++.+..+.+.+.|++.
T Consensus 289 ~l~~G~pig~v~~~~------~i~~~~~~~~~~~T~~g~~l~~aaa~a-~l~~i~~~~~~~---~~~~~g~~l~~~l~~l 358 (451)
T PRK06918 289 SLGAGVPISGVIGRK------EIMDESAPGELGGTYAGSPLGCAAALA-VLDIIEKENLND---RAIELGKVVMNRFEEM 358 (451)
T ss_pred hhcCCCccEEEEEcH------HHHhccCCCCcCcCCCcCHHHHHHHHH-HHHHHHHCCHHH---HHHHHHHHHHHHHHHH
Confidence 98 578889999987 676666543333344554444444444 456554444433 3334445555655441
Q ss_pred --CCEEec--CCCCCeeEEEEec-CC--CC-C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 385 --GYKLVS--GGSDNHLVLVDLR-PM--GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 385 --G~~v~~--~gt~~~~~~vd~~-~~--g~-~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
++.++. .+. ..++.+.+. +. .. + ...+.+.|.+.||.+. |+. .+ .+.+|++.+.. ++
T Consensus 359 ~~~~~~~~~vrg~-G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~----~~~--~~-~~~lrl~p~l~----~t 426 (451)
T PRK06918 359 KNKYNCIGDVRGL-GAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLL----SAG--TY-GNVIRVLMPLV----IT 426 (451)
T ss_pred HhhCCCceeeccc-eeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEe----ecC--CC-CCEEEEECCCc----cC
Confidence 222211 122 223333331 10 11 1 2345566678999984 332 11 36799986632 45
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 454 ~~d~~~la~~i~~~l~~~ 471 (520)
+++++++.+.|.++++..
T Consensus 427 ~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 427 DEQLEEGLTIIEESLQAC 444 (451)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999988643
No 336
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.25 E-value=6.7e-09 Score=110.10 Aligned_cols=320 Identities=13% Similarity=0.055 Sum_probs=173.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+. ...... . +. ++ ...+ ..+++.+++....+. ....+||++|+.+++....
T Consensus 60 h~~p~v~~ai~~q~~~~-~~~~~~-~-~~-~~---~~~~-lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~ 128 (429)
T PRK06173 60 YNHPRLNAAATNQLAKM-SHIMFG-G-FT-HE---PAVE-LAQKLLEILPPSLNK---IFFADSGSVAVEVAMKMALQYQ 128 (429)
T ss_pred CCCHHHHHHHHHHHHhc-CCcccc-c-cC-CH---HHHH-HHHHHHhhCCCCcCE---EEEeCCchHHHHHHHHHHHHHH
Confidence 34688888887766532 110000 0 11 11 1122 235666666422221 2446899999998776432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc-------------eEEEEEcccCCCC---CCCCHHHHHHHhh
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI 239 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-------------~~~~v~~~~d~~~---~~iD~d~le~~i~ 239 (520)
++| .+|+...-.|.|. +.+. +++.+. ....++++..... ..-+++.+++.+.
T Consensus 129 ~~~g~~~r~~ii~~~~~yHG~-t~~a------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~ 201 (429)
T PRK06173 129 QAKGEVQRTKFATIRSGYHGD-TWHA------MSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE 201 (429)
T ss_pred HHhCCCCCcEEEEECCCcCCc-chhh------hccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence 133 5688777655332 1111 111110 0111222211000 0114566777775
Q ss_pred hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCccc
Q 010008 240 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 307 (520)
Q Consensus 240 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l 307 (520)
.+ +..+||+.. -..++ ..-+++++++|+++|+++|+|++| .|+-..|.. ..-+. ..|+++ +.|.|
T Consensus 202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l 278 (429)
T PRK06173 202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKAL 278 (429)
T ss_pred hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence 32 455677764 22222 223789999999999999999998 675222211 01111 368887 56998
Q ss_pred CCC--CceEEEeeCCCcchhhHHHhhccc-----CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 010008 308 RGP--RGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 308 ~Gp--rgG~I~~~~~~~~~~~l~~~i~~~-----~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~ 380 (520)
.|. ..+.++.++ ++.+.+... ....+.+++ ...+++...+|+.+.+.+ ..+++.++.+.|.+.
T Consensus 279 ~gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~g~-p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~ 348 (429)
T PRK06173 279 TGGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFMAN-PLACAIAAESIRLLLESP---WQQNIQRIEAQLKQE 348 (429)
T ss_pred hCCccccceEEecH------HHHHHHhcCCCCccccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHH
Confidence 542 356666666 555554321 111223343 333443334677665433 356777778888888
Q ss_pred HHHC-CCEEecC--CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHH
Q 010008 381 LVEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEF 457 (520)
Q Consensus 381 L~~~-G~~v~~~--gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~ 457 (520)
|++. +++.+.. + ...+.-+.+... .+...+.+.|.+.||.+... ...||+.. .++ ++++|+
T Consensus 349 L~~~~~~~~v~~vRg-~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~----------g~~l~~~P-pl~---it~~ei 412 (429)
T PRK06173 349 LAPAAEFDSVAEVRV-LGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF----------GKLVYIMP-PFI---ISPDEL 412 (429)
T ss_pred HHHhhcCCCeeeeec-cceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEeC-Ccc---CCHHHH
Confidence 8753 4443321 2 234444555432 23466788888999998421 14799964 455 679999
Q ss_pred HHHHHHHHHHHHH
Q 010008 458 VAIADFIHEGVEI 470 (520)
Q Consensus 458 ~~la~~i~~~l~~ 470 (520)
+++.+.+++++..
T Consensus 413 ~~~~~~l~~~l~~ 425 (429)
T PRK06173 413 SQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 337
>PRK06105 aminotransferase; Provisional
Probab=99.25 E-value=1.1e-08 Score=109.55 Aligned_cols=323 Identities=14% Similarity=0.097 Sum_probs=171.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-+|.|.+|+.+.+.+. .......+|. ++ ... ...+++.+++..+.+. .....||++|+.+++....
T Consensus 64 h~~p~i~~Ai~~q~~~~-~~~~~~~~~~--~~---~~~-~lae~L~~~~p~~~~~---v~f~~SGseAve~AlKlar~~~ 133 (460)
T PRK06105 64 FSEQRLVEAAARQMKKL-PFYHTFSHKS--HG---PVI-DLAEKLVAMAPVPMSK---VFFTNSGSEANDTVVKLVWYYN 133 (460)
T ss_pred CCCHHHHHHHHHHHHhC-CCeecccccC--CH---HHH-HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 45788999998887542 1111111111 11 112 2336677777543321 2345899999998887531
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC---CC-------CCCHHH
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYDM 233 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~---~~-------~iD~d~ 233 (520)
.+| .+|+...-.|.|.- .+ .+++.+. .+..+++|.... .+ ...+++
T Consensus 134 ~~~g~t~r~~il~~~~~yHG~t-~~------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06105 134 NALGRPEKKKIISRQRGYHGVT-IA------SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANE 206 (460)
T ss_pred HhcCCCCCcEEEEecCccCCcc-hh------heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHH
Confidence 133 57777765543321 11 1111111 011122211000 00 012356
Q ss_pred HHHHhhh---cCCcEEEEcCC-CC-CCCCC----HHHHHHHHHHhCCEEEEechhh-cccccccccCCCCC-cccEEEec
Q 010008 234 LEKTAIL---FRPKLIIAGAS-AY-PRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVADPFK-YCDVVTTT 302 (520)
Q Consensus 234 le~~i~~---~~pklIi~~~s-~~-p~~~d----~~~i~~ia~~~g~~li~D~Ah~-~gli~~~~~~~p~~-~aDiv~~S 302 (520)
+++++.. .++.+||+..- .. +...+ +++++++|+++|+++|+|++|. .|-........-+. -.|+++++
T Consensus 207 le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~g 286 (460)
T PRK06105 207 LEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMS 286 (460)
T ss_pred HHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeee
Confidence 7777642 24567777532 22 22333 8999999999999999999973 33321100000011 36888765
Q ss_pred cCcccCCC--CceEEEeeCCCcchhhHHHhhccc-----C--CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 303 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 303 ~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~-----~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
|.|.|. ..|.+++++ ++.+.+... . ..++.++......++++ .|+.+.++ +..+++.+.
T Consensus 287 --K~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a-~L~~i~~~---~l~~~v~~~ 354 (460)
T PRK06105 287 --KQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALE-NLAIIEER---DLVGNAAER 354 (460)
T ss_pred --cccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHH-HHHHHHhc---cHHHHHHHH
Confidence 999653 467888877 565555321 1 12233443443444443 57766543 345677777
Q ss_pred HHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCC-----CC-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEE
Q 010008 374 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGI 440 (520)
Q Consensus 374 a~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g-----~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~gi 440 (520)
.++|.+.|++. .+.++.. |. ..+.-+.+.... .+ ...+.+.|.+.||.+.. . ...+
T Consensus 355 g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~----~------g~~i 423 (460)
T PRK06105 355 GARLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRA----M------GDTL 423 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEe----c------CCEE
Confidence 78888877663 2222221 11 122223432110 01 13466677789999842 1 2368
Q ss_pred EEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 441 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 441 Rig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|+..| ++ ++++|++++.+.+.++++.
T Consensus 424 ~l~Pp-l~---it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 424 AFCPP-LI---ITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred EEECC-Cc---cCHHHHHHHHHHHHHHHHH
Confidence 99755 43 5699999999999999875
No 338
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.24 E-value=1.1e-08 Score=109.16 Aligned_cols=320 Identities=17% Similarity=0.144 Sum_probs=169.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+++...+.+- ..+.. +...++ ...++ .+++.+++....+. ....+||++|+.+++....
T Consensus 65 h~~p~v~~ai~~ql~~l-~~~~~---~~~~~~---~~~~l-a~~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~~ 133 (445)
T PRK09221 65 HGRPEIVEAVARQAATL-DYAPA---FQMGHP---LAFEL-AERLAELAPGGLDH---VFFTNSGSESVDTALKIALAYH 133 (445)
T ss_pred CCCHHHHHHHHHHHHhc-cCccc---cccCCH---HHHHH-HHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 35788888888777542 11111 111122 12223 35677776432222 2346899999998876421
Q ss_pred ---C-C-CCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCCC--CC--------CCHHH
Q 010008 181 ---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GL--------VDYDM 233 (520)
Q Consensus 181 ---~-p-GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~~--~~--------iD~d~ 233 (520)
. + ..+|+...-.|.|.- .+ .++..|. .+..++++.+... +. -..++
T Consensus 134 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
T PRK09221 134 RARGQGTRTRLIGRERGYHGVG-FG------GISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD 206 (445)
T ss_pred HhcCCCCCcEEEEECCCcCccc-hh------hhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence 1 2 257887776543321 11 0111110 0112222210000 00 01356
Q ss_pred HHHHhhhc---CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEe
Q 010008 234 LEKTAILF---RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTT 301 (520)
Q Consensus 234 le~~i~~~---~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~ 301 (520)
+++.+... +..+||+.. +..+...+ +++++++|+++|+++|+|++|. |+--.|.. ..-+. ..|++++
T Consensus 207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~~ 285 (445)
T PRK09221 207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIITF 285 (445)
T ss_pred HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEEe
Confidence 77777542 345666652 22222445 8999999999999999999974 43211110 00011 2588766
Q ss_pred ccCcccCC--CCceEEEeeCCCcchhhHHHhhccc------C-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 010008 302 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 302 S~hK~l~G--prgG~I~~~~~~~~~~~l~~~i~~~------~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 372 (520)
+ |.+.| ...|.+++++ ++.+.+... . ...+.+++.....+++ .+|+.+.++ ...+++.+
T Consensus 286 g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~-a~L~~i~~~---~l~~~~~~ 353 (445)
T PRK09221 286 A--KGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGL-ATLDIYREE---DLFERAAE 353 (445)
T ss_pred c--cccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCcCHHHHHHHH-HHHHHHHhc---cHHHHHHH
Confidence 5 99854 3467777776 555544321 1 1223344444433444 467766543 34567777
Q ss_pred HHHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCC----CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccC
Q 010008 373 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPM----GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSP 445 (520)
Q Consensus 373 na~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~----g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~ 445 (520)
..++|.+.|++. ++..+.. |. .-+.-+.+... ......+.+.|.+.||.+.. ....+|+..+
T Consensus 354 ~g~~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----------~~~~lr~~Pp 422 (445)
T PRK09221 354 LAPYFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRY----------TGDTIALSPP 422 (445)
T ss_pred HHHHHHHHHHhhccCCCEEEEecC-ceEEEEEEecccccccchHHHHHHHHHHCCeEEee----------cCCEEEEECC
Confidence 778888887763 3332221 11 12222333321 11134567778889999842 1247999755
Q ss_pred CccccCCCHHHHHHHHHHHHHHHH
Q 010008 446 AMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 446 ~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
++ ++++|++++.+.+++++.
T Consensus 423 -l~---~t~~eid~~~~~l~~~l~ 442 (445)
T PRK09221 423 -LI---IEKAQIDELVDALGDALR 442 (445)
T ss_pred -cc---CCHHHHHHHHHHHHHHHH
Confidence 43 569999999999999885
No 339
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.24 E-value=1.8e-08 Score=107.34 Aligned_cols=200 Identities=20% Similarity=0.198 Sum_probs=116.5
Q ss_pred CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-cccEEEeccCcccC-CCC
Q 010008 242 RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 311 (520)
Q Consensus 242 ~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-~aDiv~~S~hK~l~-Gpr 311 (520)
+..+||+.. ++.+...+ +++++++|+++|+++|+|++|. |+...|... ..+. ..|++++ .|.+. |.+
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~--~K~l~~G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITL--AKAIAGGLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEE--cccccCCcc
Confidence 456666652 22223455 9999999999999999999976 543223110 0111 2588865 59884 556
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCC--CEEe
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLV 389 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G--~~v~ 389 (520)
.|++++++ ++.+.+... ...+.++......+++ .+|+.+.+ +..+++.+..++|.+.|++.. +.++
T Consensus 298 ~gav~~~~------~i~~~~~~~-~~~T~~g~p~~~aaa~-a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~ 365 (441)
T PRK05769 298 LGAVIGRA------ELMFLPPGS-HANTFGGNPVAAAAAL-ATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFI 365 (441)
T ss_pred cEEEEEeh------hhhhcCCCC-CCCCCCcCHHHHHHHH-HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 78888887 454333222 2223344333333343 35666542 445667777788888886632 3332
Q ss_pred cC--CCCCeeEEEEecCCC--CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHH
Q 010008 390 SG--GSDNHLVLVDLRPMG--ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIAD 462 (520)
Q Consensus 390 ~~--gt~~~~~~vd~~~~g--~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~ 462 (520)
.. |. ..+.-+.+.... -+ ...+.+.|.+.||.+.. .....+|+..+. + ++++|++++.+
T Consensus 366 ~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~---------~~~~~lr~~p~l-~---~t~~~id~~~~ 431 (441)
T PRK05769 366 GDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG---------AGKSAIRIIPPL-I---ITEEEADIGLE 431 (441)
T ss_pred eeeecc-eEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec---------CCCCEEEEeCCC-C---CCHHHHHHHHH
Confidence 21 11 123333442210 01 23456667789999832 123579997653 2 56999999999
Q ss_pred HHHHHHHH
Q 010008 463 FIHEGVEI 470 (520)
Q Consensus 463 ~i~~~l~~ 470 (520)
.+++++..
T Consensus 432 ~l~~~l~~ 439 (441)
T PRK05769 432 ILEEAIKE 439 (441)
T ss_pred HHHHHHHH
Confidence 99998863
No 340
>PRK06541 hypothetical protein; Provisional
Probab=99.23 E-value=1.3e-08 Score=108.84 Aligned_cols=215 Identities=17% Similarity=0.168 Sum_probs=121.9
Q ss_pred HHHHHHhhhc---CCcEEEEcC-CCCCC-CCC----HHHHHHHHHHhCCEEEEechh-hcccccccccCCCCC-cccEEE
Q 010008 232 DMLEKTAILF---RPKLIIAGA-SAYPR-DFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVT 300 (520)
Q Consensus 232 d~le~~i~~~---~pklIi~~~-s~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah-~~gli~~~~~~~p~~-~aDiv~ 300 (520)
+.+++.+... +..+||+.. .+..+ ..+ +++|+++|+++|+++|+|++| ..|-........-+. ..|+++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt 287 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT 287 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE
Confidence 6677777532 334555543 12222 344 899999999999999999997 333221110000011 358876
Q ss_pred eccCcccC-CC-CceEEEeeCCCcchhhHHHhhccc--CC--CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 010008 301 TTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNA--VF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 374 (520)
Q Consensus 301 ~S~hK~l~-Gp-rgG~I~~~~~~~~~~~l~~~i~~~--~~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na 374 (520)
+.|.+. |+ +.|.+++++ ++.+.+... .+ .+..+++.....+++ ..++.+..+ ...+++.++.
T Consensus 288 --~gK~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~gnp~~~aaal-a~l~~l~~~---~~~~~~~~~g 355 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGGHPVSAAVAL-ANLDIFERE---GLLDHVRDNE 355 (460)
T ss_pred --ecccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCCCHHHHHHHH-HHHHHHHhc---cHHHHHHHHH
Confidence 569986 43 567777776 555554322 11 123333333333333 346655433 3457777888
Q ss_pred HHHHHHHHHC-CCEEec--CCCCCeeEEEEecCC-----CCCH--------HHHHHHHhhcCeEEcCCCCCCCCCCCCCC
Q 010008 375 RALASRLVEL-GYKLVS--GGSDNHLVLVDLRPM-----GIDG--------ARVEKILDMASITLNKNSVPGDKSALVPG 438 (520)
Q Consensus 375 ~~l~~~L~~~-G~~v~~--~gt~~~~~~vd~~~~-----g~~~--------~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~ 438 (520)
++|.+.|.+. .+.++. .| ...+.-+.+... ..+. ..+.+.|.+.||.+... | .+..
T Consensus 356 ~~l~~~L~~l~~~~~v~~vrg-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~-----~g~~ 427 (460)
T PRK06541 356 PAFRATLEKLLDLPIVGDVRG-DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--D-----RGDP 427 (460)
T ss_pred HHHHHHHHHhhcCCCeEEEEe-cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--C-----CCCC
Confidence 8888888763 233221 11 223334444211 0000 23556777899998531 1 1235
Q ss_pred EEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 439 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 439 giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.||++.+ ++ ++++|++++.+.+++++..
T Consensus 428 ~lrl~Pp-l~---~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 428 VVQLAPP-LI---SGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEECC-CC---CCHHHHHHHHHHHHHHHHH
Confidence 7999766 33 5699999999999999864
No 341
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.23 E-value=5.4e-09 Score=110.85 Aligned_cols=320 Identities=13% Similarity=0.075 Sum_probs=175.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-+|.|.+++...+.. +...... .++ .. ..++ ..+++.++++-..+. ....+||++|+..++....
T Consensus 61 h~~p~v~~ai~~~~~~-~~~~~~~-~~~-~~---~~~~--la~~l~~~~~~~~~~---v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-MSHVMFG-GFT-HK---PAIE--LCQKLVKMTPNALDC---VFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc-ccC-CH---HHHH--HHHHHHhhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 4568888888777643 2211111 111 11 1222 235666776533222 2446799999998876432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc-----------e--EEEEEcccCCCC---CCCCHHHHHHHhh
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------Y--FESMPYRLDEST---GLVDYDMLEKTAI 239 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-----------~--~~~v~~~~d~~~---~~iD~d~le~~i~ 239 (520)
.+| .+|+..+-.|.|+.. + ...+.+. . ...++++...-. ..-|++++++.+.
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTF-G------AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccH-h------hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 133 678888766544311 0 0111110 0 011111111000 0125677777776
Q ss_pred hc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCccc
Q 010008 240 LF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 307 (520)
Q Consensus 240 ~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l 307 (520)
.. +..+||+.. ...++ ..++++|+++|+++|+++|+|++| .|+...|.. ..-+. ..|+++ +.|.|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 42 345666653 33332 346889999999999999999998 565332211 10111 368887 57998
Q ss_pred CCC--CceEEEeeCCCcchhhHHHhhcccC-----CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 010008 308 RGP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 308 ~Gp--rgG~I~~~~~~~~~~~l~~~i~~~~-----~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~ 380 (520)
.|. ..+.+++++ ++.+.++... +....+++ ...+++...+|+.+.+.+ ..+++.++.++|.+.
T Consensus 280 ~gG~~p~~a~~~~~------~~~~~~~~~~~~~~~~~~T~~g~-p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~ 349 (427)
T TIGR00508 280 TGGYMTLSATVTTD------KVAQTISSGEAGCFMHGPTFMGN-PLACAVAEASLAILLEGE---WQKQVSAIENQLKRE 349 (427)
T ss_pred hcCcccceEEEEcH------HHHHHHhcCCCCccccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHH
Confidence 442 346667766 5666554321 11222333 333333334677654433 357777788888888
Q ss_pred HHHCCC-EEecCCC-CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHH
Q 010008 381 LVELGY-KLVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFV 458 (520)
Q Consensus 381 L~~~G~-~v~~~gt-~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~ 458 (520)
|++.+. ..+...+ ...+..+.+... .+...+.+.|.+.||.+... ...+|+..+.. ++++|++
T Consensus 350 L~~l~~~~~i~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~Gv~~~~~----------~~~l~~~ppl~----~t~~~id 414 (427)
T TIGR00508 350 LSPLRKNPVVKDVRVLGAIGVVEMYKP-VNVEELQKKFVEQGVWIRPF----------GKLIYVMPPYI----ITTEQLQ 414 (427)
T ss_pred HHHhhcCCCEEeEeccccEEEEEECCc-cCHHHHHHHHHHCCeEEEec----------CCEEEEECCCC----CCHHHHH
Confidence 877432 1121100 123444555322 23567788888999998421 13689976643 5689999
Q ss_pred HHHHHHHHHHH
Q 010008 459 AIADFIHEGVE 469 (520)
Q Consensus 459 ~la~~i~~~l~ 469 (520)
++.+.+++++.
T Consensus 415 ~~~~~l~~~l~ 425 (427)
T TIGR00508 415 KLTAALIEALH 425 (427)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 342
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.23 E-value=2.3e-09 Score=111.47 Aligned_cols=278 Identities=18% Similarity=0.160 Sum_probs=139.7
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH----HHHHHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS----PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 219 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs----~A~~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~ 219 (520)
-+..++++.|.+. +|.....|+ +|..+++..--+..++|+++.-.|+.+.. ... -...+..++++.
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~-v~~-----t~a~~~g~~iv~ 184 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRA-VLR-----TYAAPLGIEIVE 184 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHH-HHH-----HHCCHCCEEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHH-HHH-----HhhhhCCeEEEE
Confidence 3478999999985 344444443 34333333333445799999876654432 000 112334467888
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-ccc
Q 010008 220 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 297 (520)
Q Consensus 220 ~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aD 297 (520)
++.+ +.+..| .+ ++..|++.+||+-+ ..|+++|.+++|++|+++++ .+ ...+.+....|-+ |+|
T Consensus 185 ~~~~-~~~~~d--------~~-~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~a---d~~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 185 VPLD-EDGTTD--------DD-DTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GA---DPNALGGLKSPGEYGAD 250 (429)
T ss_dssp E-BB-TTCSB---------ST-TEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CG---GCCGCCTC--GGGGT-S
T ss_pred eccc-ccCCcc--------cc-CeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ec---CHHHHhCcCChhhcCcc
Confidence 7776 345556 33 78889999998766 66899999999999999987 54 3344444455655 899
Q ss_pred EEEeccCccc------CCCCceEEEeeCCCc----------------------chhhHHHhhcccCCCCCCCCChHHHHH
Q 010008 298 VVTTTTHKSL------RGPRGGMIFFKKDPV----------------------LGVELESAINNAVFPGLQGGPHNHTIG 349 (520)
Q Consensus 298 iv~~S~hK~l------~GprgG~I~~~~~~~----------------------~~~~l~~~i~~~~~p~~~g~p~~~~ia 349 (520)
|+++. ||+| +||..|++.+++... .+..-.+.|++-.-....++ +..+.
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIct--nqaL~ 327 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICT--NQALL 327 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---S--S-HHH
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhh--hHHHH
Confidence 99766 8876 566669999988410 00011112221110111122 11222
Q ss_pred HHHH--HHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCC
Q 010008 350 GLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN 426 (520)
Q Consensus 350 ala~--al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~ 426 (520)
|+.+ -+..+...++++..+++..++.++++.|.+. ++.+ .+..-... +++.. ......++.+.+...|+...
T Consensus 328 A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e~-v~~~~-~~~~~~~l~~~~~~~gl~~~-- 402 (429)
T PF02347_consen 328 ALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFEF-VVVFS-KDKEVEELLKRGIEGGLNLR-- 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSSE-EEEES-S-HHHHHHHHTT----EEEG--
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCceee-eeecC-CcHHHHHHHHHHHhcCCCcc--
Confidence 2221 2334445678999999999999999999885 2222 22111112 22222 11111123333334553332
Q ss_pred CCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 427 SVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 427 ~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
.| ..+.+-++....++ ++|++.+++++
T Consensus 403 -~~------~~~~~li~~TE~~t----~edid~lv~~f 429 (429)
T PF02347_consen 403 -YP------DDGALLICVTETRT----KEDIDRLVEAF 429 (429)
T ss_dssp -GG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred -cc------CCCeEEEEccCCCC----HHHHHHHHhcC
Confidence 22 23467777666554 89999998764
No 343
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.21 E-value=4.3e-09 Score=105.00 Aligned_cols=306 Identities=16% Similarity=0.177 Sum_probs=179.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh-CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI-LKP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al-l~p 182 (520)
.|..+++.....|..- .|..| -|.....+.-+++.+.+.+.++=| .+.+|. +|..|+|+ .|+..++.-+ ..+
T Consensus 87 fp~Dai~RA~~~L~~~--gGs~G--aYS~SqGv~~vR~~VA~~I~rRDG-~p~~p~-dI~LT~GAS~ai~~il~l~~~~~ 160 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDC--GGSLG--AYSDSQGVPGVRKHVAEFIERRDG-IPADPE-DIFLTTGASPAIRSILSLLIAGK 160 (475)
T ss_pred CCHHHHHHHHHHHHhc--CCccc--ccccccCChhHHHHHHHHHHhccC-CCCCHH-HeeecCCCcHHHHHHHHHHhcCC
Confidence 4555555555555432 23333 244444455666666678888888 544553 67778887 7888777766 458
Q ss_pred CCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCC-CCCCHHHHHHHhhh----cCCcEEEEcCCCCCC--
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAIL----FRPKLIIAGASAYPR-- 255 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~-~~iD~d~le~~i~~----~~pklIi~~~s~~p~-- 255 (520)
.|-||++-|.|. .+...++..|. ..++|-+|+++ |.+|.++|++.+.+ .+|+++++-.|.||+
T Consensus 161 ~~GvliPiPQYP--------LYsAti~l~~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGq 230 (475)
T KOG0258|consen 161 KTGVLIPIPQYP--------LYSATISLLGG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQ 230 (475)
T ss_pred CCceEeecCCCc--------hhHHHHHHhCC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccch
Confidence 899999988653 22234445554 56777788664 78999999876654 478888777888887
Q ss_pred ---CCCHHHHHHHHHHhCCEEEEechhhcccccccc--cCC------CC--Cccc----EEEeccCccc---CCCCceEE
Q 010008 256 ---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VAD------PF--KYCD----VVTTTTHKSL---RGPRGGMI 315 (520)
Q Consensus 256 ---~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~--~~~------p~--~~aD----iv~~S~hK~l---~GprgG~I 315 (520)
.-.+++|..+|.+.|++|+.|+. |-.-++.+. +.+ .+ ++.| +...|+||.+ +|.|||+.
T Consensus 231 vls~e~ie~i~~fa~~~~l~llaDEV-YQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYm 309 (475)
T KOG0258|consen 231 VLSEENIEGIICFAAEEGLVLLADEV-YQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYM 309 (475)
T ss_pred hhcHHHHHHHHHHHHHcCeEEechHH-HHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCee
Confidence 34789999999999999999987 333333321 110 00 1332 3345777876 78999986
Q ss_pred Ee-eCCCcchhhHHHhh--------------cccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Q 010008 316 FF-KKDPVLGVELESAI--------------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 380 (520)
Q Consensus 316 ~~-~~~~~~~~~l~~~i--------------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~ 380 (520)
=. +-.......+.+.+ +..+.|..-|.++.+...+ +-+........+++.+.+.
T Consensus 310 Ev~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~~~~ 378 (475)
T KOG0258|consen 310 ESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLTEDA 378 (475)
T ss_pred ecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHHHHH
Confidence 33 22110000111111 1122233334444433321 1123445566678888888
Q ss_pred HHH-CCCEEecCCCCCeeEE--EEecC--------CCCCHHH--HHHHHhhcCeEEcCCCCCCCCCCC--CCCEEEEc
Q 010008 381 LVE-LGYKLVSGGSDNHLVL--VDLRP--------MGIDGAR--VEKILDMASITLNKNSVPGDKSAL--VPGGIRIG 443 (520)
Q Consensus 381 L~~-~G~~v~~~gt~~~~~~--vd~~~--------~g~~~~~--~~~~L~~~gI~v~~~~~Pg~~~~~--~~~giRig 443 (520)
+++ .|+.+.... ...+.+ +++.. .++..+. +.++|++.||.+ +||..... ++-++|..
T Consensus 379 ~ns~~gi~cn~~q-GAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcv----VPGSGFGQ~~GtyH~R~T 451 (475)
T KOG0258|consen 379 FNSLEGISCNPVQ-GAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICV----VPGSGFGQKEGTYHFRTT 451 (475)
T ss_pred HhhcCceeeccCc-cceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEE----ecCCCCCCCCceeEEEEe
Confidence 888 587775431 122222 23322 1333333 568899999999 78765222 23457764
No 344
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.19 E-value=5e-08 Score=104.47 Aligned_cols=314 Identities=16% Similarity=0.114 Sum_probs=162.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 182 (520)
-.|.|.+++...+......+. .++ .++| ..+++.+.+.. .+. + ...+||++|+.+++... ...
T Consensus 116 ~~p~v~~av~~ql~~~~~~~~-------~~~--~~~~--lAe~l~~~~p~-~~~--v-~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 116 ADDEVLAALAETMKKGTSFGA-------PCL--LENV--LAEMVIDAVPS-VEM--V-RFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CCHHHHHHHHHHHhhCCCCCC-------CCH--HHHH--HHHHHHHhCCC-CCE--E-EEeCChHHHHHHHHHHHHHhcC
Confidence 469999999888764321111 111 2222 33567776642 222 2 33589999999887643 222
Q ss_pred CCEEEEcCCCCCccc-ccccccccc--c---cccccceE----EEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 010008 183 HDRIMGLDLPHGGHL-SHGFMTPKR--R---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 250 (520)
Q Consensus 183 GD~Vl~~~~~~~ghl-s~g~~~~~~--~---v~~~g~~~----~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~ 250 (520)
.++|+...-.|.|+. +.+...... . ....|... ..+.++ .-|++++++.+..+ +..+||+..
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECC
Confidence 367887765443321 000000000 0 00000000 011111 12788999888653 345666652
Q ss_pred C-CCCC-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccCC-CCceEEEeeCC
Q 010008 251 S-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 320 (520)
Q Consensus 251 s-~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~ 320 (520)
. .+.+ ..+ +++++++|+++|+++|+|++| .|+ -.+.. ..-+. ..|++++ .|.+.| ...|.+.+++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGf-R~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~- 329 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGF-RIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR- 329 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCe-ecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH-
Confidence 1 2222 222 678999999999999999998 565 22210 00011 3688655 599954 3346667777
Q ss_pred CcchhhHHHhhccc--CC-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CCCEEecCCC
Q 010008 321 PVLGVELESAINNA--VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGS 393 (520)
Q Consensus 321 ~~~~~~l~~~i~~~--~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G~~v~~~gt 393 (520)
++.+.+... .+ .++.++... .+++...+|+.+.+++ ..+++.++.++|.+.|.+ .|++++..+-
T Consensus 330 -----ei~~~~~~~~~~~~~~T~~gnpl-~~aAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v 400 (474)
T PLN02482 330 -----EIMEMVAPAGPMYQAGTLSGNPL-AMTAGIHTLKRLQQPG---TYEYLDKITKKLIQGILEAGKKAGHEMCGGYI 400 (474)
T ss_pred -----HHHHhhccCCCcccccCcchhHH-HHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc
Confidence 666665421 11 122223222 3333333577665433 456666677777777765 3455442111
Q ss_pred CCeeEEEEecCCC---------CCH---HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 394 DNHLVLVDLRPMG---------IDG---ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 394 ~~~~~~vd~~~~g---------~~~---~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
..++-+.+.... -+. ..+.+.|.+.||.+.....| . +++. .-++++|++++.
T Consensus 401 -~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~--------~----~~ps---l~ht~~dId~~l 464 (474)
T PLN02482 401 -SGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFE--------A----GFTS---LAHTEEDIDFTI 464 (474)
T ss_pred -ceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCC--------C----CcCC---CCCCHHHHHHHH
Confidence 112222221100 011 24566677899998532110 0 1122 236799999999
Q ss_pred HHHHHHHH
Q 010008 462 DFIHEGVE 469 (520)
Q Consensus 462 ~~i~~~l~ 469 (520)
+.+++++.
T Consensus 465 ~al~~~l~ 472 (474)
T PLN02482 465 AAAERVLA 472 (474)
T ss_pred HHHHHHHH
Confidence 99998875
No 345
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.19 E-value=1.4e-08 Score=102.15 Aligned_cols=342 Identities=18% Similarity=0.161 Sum_probs=165.3
Q ss_pred hccceEecCCCCChHHHHHHHhhhhh---cc-C-CCCCCCCCCC-CcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecC
Q 010008 93 FKSLELIASENFTSRAVMEAVGSCLT---NK-Y-SEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 166 (520)
Q Consensus 93 ~~~i~Liasen~~~~~V~ea~~s~l~---~~-y-~~G~p~~ryy-~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~ 166 (520)
...++|.-+-.-++++-++--...|. .. + +.| ...|-| |+...+.++ ++.+++++|+++++ |.+.
T Consensus 22 a~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG-~D~RNY~G~l~Gipe~----r~l~a~llgv~~~~----viv~ 92 (425)
T PF12897_consen 22 AKGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADG-TDCRNYPGGLDGIPEA----RELFAELLGVPPEN----VIVG 92 (425)
T ss_dssp HTT--EES---S--HHHHHGGGGGGGSSTTCCBECTT-EBTTSS-S-SS--HHH----HHHHHHHHTS-GGG----EEE-
T ss_pred HcCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCC-ccccCCCCccCChHHH----HHHHHHHhCCCHHH----EEEe
Confidence 36788887777777776665333333 11 1 222 234667 777666654 47789999999874 3333
Q ss_pred ChH--HHHHHH-HHhh----CC--------CCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCH
Q 010008 167 SGS--PANFEV-YTAI----LK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 231 (520)
Q Consensus 167 sGs--~A~~~~-l~al----l~--------pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~ 231 (520)
..| .-++-+ ..++ .. +.=+.|++.|.|--|++ .....|. +.+++|.++ ..+|+
T Consensus 93 gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Gi--emi~VpM~~--dGPDm 160 (425)
T PF12897_consen 93 GNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGI--EMIPVPMTE--DGPDM 160 (425)
T ss_dssp SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT---EEEEEEEET--TEE-H
T ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCc--EEEecCCCC--CCCCH
Confidence 333 333222 2232 11 12357888887766653 2233454 777777763 46999
Q ss_pred HHHHHHhhh-cCCcEEEEc-CCCCCC--CCCHHHHHHHH----HHhCCEEEEechhhccccccccc-C---CCCC-----
Q 010008 232 DMLEKTAIL-FRPKLIIAG-ASAYPR--DFDYPRMRQIA----DAVGALLMMDMAHISGLVAASVV-A---DPFK----- 294 (520)
Q Consensus 232 d~le~~i~~-~~pklIi~~-~s~~p~--~~d~~~i~~ia----~~~g~~li~D~Ah~~gli~~~~~-~---~p~~----- 294 (520)
|.+|+++.+ -..|.|+|. .-+||+ ...-+.++++| ...+..++.|.|++......+.. . +.+.
T Consensus 161 D~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A 240 (425)
T PF12897_consen 161 DMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA 240 (425)
T ss_dssp HHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT
T ss_pred HHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc
Confidence 999999854 245888886 234555 44555555565 35699999999977665533211 1 1111
Q ss_pred -ccc--EEEeccCc-ccCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHH
Q 010008 295 -YCD--VVTTTTHK-SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 370 (520)
Q Consensus 295 -~aD--iv~~S~hK-~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 370 (520)
+.| ++..||+| ||+|-..+++..++. -.+.+.+.......|.--++++.-.. =|+... .+.++.+++.
T Consensus 241 Gnpdrv~~F~STSKITf~GaGva~~aaS~~------Nl~~~~~~~~~~tIgpdKvNQLRHvr-ff~d~~-gGv~aHM~kH 312 (425)
T PF12897_consen 241 GNPDRVYVFASTSKITFPGAGVAFFAASEA------NLAWIKKHLSVQTIGPDKVNQLRHVR-FFKDAE-GGVRAHMRKH 312 (425)
T ss_dssp T-TTSEEEEEESTTTS-TTSS-EEEEE-HH------HHHHHHHHHHHH-S---HHHHHHHHH-HHHSHH-THHHHHHHHH
T ss_pred CCCCeEEEEecccccccCCcceeeeecCHH------HHHHHHHHhcCceeCccHHHHHHHHH-HhcChh-hHHHHHHHHH
Confidence 234 67789999 678877788888873 33333222111112322333332110 111110 0222222221
Q ss_pred --------HHHHHHHHHHHH-HCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCC--CCCCCCCCCCCCE
Q 010008 371 --------VSNCRALASRLV-ELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKN--SVPGDKSALVPGG 439 (520)
Q Consensus 371 --------~~na~~l~~~L~-~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~--~~Pg~~~~~~~~g 439 (520)
..-.+.|.++|. ..|+--.+.....+++.+|+.+ | +...+.+++.++||.+... ++|....| ..+.
T Consensus 313 a~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtfPyg~DP-~D~n 389 (425)
T PF12897_consen 313 AAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATFPYGKDP-RDSN 389 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTSGGG--T-TS-E
T ss_pred HHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCCCCCCCC-CCCc
Confidence 122334455555 4455444433445777888753 3 5788999999999998642 24432212 3578
Q ss_pred EEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 440 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 440 iRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
|||.. .+.+ .+|++...+.+.-+++.+
T Consensus 390 IRiAP-S~P~----leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 390 IRIAP-SYPS----LEELETAMDVFATCVKLA 416 (425)
T ss_dssp EEE---SSS-----HHHHHHHHHHHHHHHHHH
T ss_pred EEecC-CCCC----HHHHHHHHHHHHHHHHHH
Confidence 99963 3433 689999999988887765
No 346
>PRK06062 hypothetical protein; Provisional
Probab=99.18 E-value=5.9e-08 Score=103.65 Aligned_cols=320 Identities=13% Similarity=0.064 Sum_probs=163.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 182 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~p 182 (520)
.-.|.|.+|+...+.. .....+ .| . .+ ...+ ..+++.+++.-..+. ....+|||+|+.+++... .-.
T Consensus 69 h~~p~v~~Ai~~q~~~-~~~~~~--~~-~-~~---~~~~-lae~L~~~~p~~~~~---v~f~~SGsEAve~AlklAr~~t 136 (451)
T PRK06062 69 HQHPKVVAAIQEQAAR-LCTVAP--AH-A-ND---ARSE-AARLIAERAPGDLSK---VFFTNGGADANEHAVRMARLHT 136 (451)
T ss_pred CCCHHHHHHHHHHHHh-cCCcCC--cc-C-CH---HHHH-HHHHHHHhCCCCCCE---EEEcCChHHHHHHHHHHHHHhh
Confidence 3468888888877653 211111 11 1 12 1122 235666766432222 244689999999887643 223
Q ss_pred -CCEEEEcCCCCCccccccccccccccccccc-----------eEEEEEcccCC-CCC--CCC-------HHHHHHHhhh
Q 010008 183 -HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDE-STG--LVD-------YDMLEKTAIL 240 (520)
Q Consensus 183 -GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~-----------~~~~v~~~~d~-~~~--~iD-------~d~le~~i~~ 240 (520)
..+|+...-.|.|.- .+ .++..+. .+..++++... ..+ .-| ++.+++++..
T Consensus 137 gr~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 209 (451)
T PRK06062 137 GRPKVLSAYRSYHGGT-GS------AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL 209 (451)
T ss_pred CCceEEEEeCCCCCCC-HH------HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh
Confidence 367887765443321 01 0111110 00111111100 000 012 5777877753
Q ss_pred c---CCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccC
Q 010008 241 F---RPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 308 (520)
Q Consensus 241 ~---~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~ 308 (520)
. +..+||+..- ...+ ..+ +++++++|+++|+++|+|++|. |+--.|.. ..-+. ..|+++++ |.|.
T Consensus 210 ~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~g--K~lg 286 (451)
T PRK06062 210 EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITFA--KGVN 286 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeeec--hhhh
Confidence 2 3456776521 2222 444 8999999999999999999975 43111110 00011 36888664 9997
Q ss_pred CC--CceEEEeeCCCcchhhHHHhhcccC--CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH-HHHHHHHHH
Q 010008 309 GP--RGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC-RALASRLVE 383 (520)
Q Consensus 309 Gp--rgG~I~~~~~~~~~~~l~~~i~~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na-~~l~~~L~~ 383 (520)
|. ..|.+++++ ++.+.+.... ...+.++... .+++..++|+.+.++++ .+++.+.. +.|.+.|++
T Consensus 287 gG~~Pigav~~~~------~i~~~~~~~~~~~~~T~~gnpl-~~Aaa~a~L~~l~~~~l---~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 287 SGYVPLGGVAISE------AIAATFADRPYPGGLTYSGHPL-ACAAAVATINAMEEEGI---VENAARIGAEVLGPGLRE 356 (451)
T ss_pred cCCcCcEEEEEcH------HHHHHhccCCCCCCCCCCCCHH-HHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHH
Confidence 52 355666666 5665554322 1223444333 33333336776654433 34444443 355555554
Q ss_pred C--CCEEec--CCCCCeeEEEEecCC-----CCC--------HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCC
Q 010008 384 L--GYKLVS--GGSDNHLVLVDLRPM-----GID--------GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 446 (520)
Q Consensus 384 ~--G~~v~~--~gt~~~~~~vd~~~~-----g~~--------~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~ 446 (520)
. .++++. .|. ..+.-+.+... ..+ ...+.+.|.+.||.+.. + ...+|+..|.
T Consensus 357 l~~~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~-------~~~lrl~ppl 425 (451)
T PRK06062 357 LAERHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---N-------GNRIHVVPPC 425 (451)
T ss_pred HHhcCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---c-------CCEEEEECCc
Confidence 1 222221 111 12233333210 001 23566778889998732 1 2468997653
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
. ++++|++++.+.++++++.
T Consensus 426 ~----~t~~eid~~~~~l~~~l~~ 445 (451)
T PRK06062 426 T----VTEDEVREGLAILDAALAV 445 (451)
T ss_pred c----CCHHHHHHHHHHHHHHHHH
Confidence 3 5699999999999998864
No 347
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.15 E-value=1.6e-07 Score=100.14 Aligned_cols=204 Identities=14% Similarity=0.130 Sum_probs=116.5
Q ss_pred CCcEEEEc-CCCCCC--CC---CHHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-cccEEEeccCccc-CCCC
Q 010008 242 RPKLIIAG-ASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPR 311 (520)
Q Consensus 242 ~pklIi~~-~s~~p~--~~---d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-~aDiv~~S~hK~l-~Gpr 311 (520)
+..+||+. ..++++ .. -+++++++|+++|+++|+|+.+ .|+-..+... .-+. -.|++++ .|.+ .|.+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~~G~P 282 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVVM--SKAVGGGLP 282 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEEE--cccccCCcc
Confidence 44566665 333433 12 3889999999999999999985 3543223110 0011 3688885 5998 4566
Q ss_pred ceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEe
Q 010008 312 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 389 (520)
Q Consensus 312 gG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~ 389 (520)
.|++++++ ++ +.+.......+.++......+|+ ++|+.+.+++ ..+++.++.++|.+.|++. .+.++
T Consensus 283 igav~~~~------~~-~~~~~~~~~~T~~gnpla~aaa~-a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v 351 (442)
T TIGR00709 283 LAVLLIAP------EF-DAWQPAGHTGTFRGNQLAMVTGT-EALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCI 351 (442)
T ss_pred cEEEEEch------HH-hccCCCcCCCCCCcCHHHHHHHH-HHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 78888877 43 33322222233444344444444 3566655444 3456666677777777652 23332
Q ss_pred cCCC-CCeeEEEEecCCC----------CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHH
Q 010008 390 SGGS-DNHLVLVDLRPMG----------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEK 455 (520)
Q Consensus 390 ~~gt-~~~~~~vd~~~~g----------~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~ 455 (520)
..-+ ..-+.-+.+.... .+ ...+...|.+.||.+... + .....||+..| ++ ++++
T Consensus 352 ~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~----~~~~~l~~~Pp-l~---it~~ 420 (442)
T TIGR00709 352 GNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETG---G----REGEVFRLLCP-IT---IDQE 420 (442)
T ss_pred eeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeec---C----CCCCEEEEECC-CC---CCHH
Confidence 2101 1223334442110 01 234566677899998431 1 12357899654 44 6799
Q ss_pred HHHHHHHHHHHHHHH
Q 010008 456 EFVAIADFIHEGVEI 470 (520)
Q Consensus 456 d~~~la~~i~~~l~~ 470 (520)
|++++.+.+++++..
T Consensus 421 ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 421 ECEEGISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999864
No 348
>PRK07678 aminotransferase; Validated
Probab=99.14 E-value=9.2e-08 Score=102.20 Aligned_cols=326 Identities=18% Similarity=0.145 Sum_probs=166.5
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l 180 (520)
.-.|.|.+|+...+..-. +.... + .++. .+| ..+++.++++... . ....+||++|+.+++... .
T Consensus 63 h~~p~v~~ai~~q~~~~~---~~~~~-~-~~~~--~~~--lae~l~~~~~~~~-~---v~f~~sGseA~e~AlklAr~~t 129 (451)
T PRK07678 63 YGRKELAEAAYEQLKTLS---YFPLT-Q-SHEP--AIK--LAEKLNEWLGGEY-V---IFFSNSGSEANETAFKIARQYH 129 (451)
T ss_pred CCCHHHHHHHHHHHHhcC---ccccc-c-CCHH--HHH--HHHHHHHhCCCCC-E---EEEeCCcHHHHHHHHHHHHHHH
Confidence 346888888877765321 11101 1 1221 222 3356777775432 1 234589999999877643 1
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC-CC-----CCCH---HHH
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-----LVDY---DML 234 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~-~~-----~iD~---d~l 234 (520)
+|| .+|+...-.|.|.- .+ .++..+. .+..++++.... .+ ..|. +.+
T Consensus 130 ~~~g~~~r~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 202 (451)
T PRK07678 130 AQKGEPHRYKFISRYRAYHGNS-MG------ALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEI 202 (451)
T ss_pred HhcCCCCCcEEEEECCCcCCcc-HH------HhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHH
Confidence 133 57887775543321 01 0111110 011122110000 00 0112 235
Q ss_pred HHHhhh---cCCcEEEEcCC-CCCC-CC----CHHHHHHHHHHhCCEEEEechhh-ccccccc-ccCCCCC-cccEEEec
Q 010008 235 EKTAIL---FRPKLIIAGAS-AYPR-DF----DYPRMRQIADAVGALLMMDMAHI-SGLVAAS-VVADPFK-YCDVVTTT 302 (520)
Q Consensus 235 e~~i~~---~~pklIi~~~s-~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~-~gli~~~-~~~~p~~-~aDiv~~S 302 (520)
++.+.. .+.-+||+..- ...+ .. -+++++++|+++|+++|+|+.+. .|-...- -... +. ..|+++++
T Consensus 203 ~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~-~gv~PDivt~g 281 (451)
T PRK07678 203 DRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMN-YGVKPDIITMA 281 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHh-cCCCCCEEEee
Confidence 555642 24556777532 1222 22 28899999999999999999863 3322100 0010 11 36999775
Q ss_pred cCcccCCC--CceEEEeeCCCcchhhHHHhhccc------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 010008 303 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 374 (520)
Q Consensus 303 ~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na 374 (520)
|.|.|. ..|.+++++ ++.+.+... ...++.+++.....++++ +|+.+.+++ ..+++.+..
T Consensus 282 --K~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a-~l~~l~~~~---~~~~~~~~g 349 (451)
T PRK07678 282 --KGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALK-NLEIMENEN---LIERSAQLG 349 (451)
T ss_pred --cccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCCcCHHHHHHHHH-HHHHHHhCC---HHHHHHHHH
Confidence 999652 467777877 566555421 112234443443344443 577665433 345566666
Q ss_pred HHHHHHHHH--CCCEEec--CCCCCeeEEEEecCCC-----CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEE
Q 010008 375 RALASRLVE--LGYKLVS--GGSDNHLVLVDLRPMG-----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRI 442 (520)
Q Consensus 375 ~~l~~~L~~--~G~~v~~--~gt~~~~~~vd~~~~g-----~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRi 442 (520)
++|.+.|++ ....++. .|. ..+.-+.+.... .+ ...+...|.+.||.+... +...+.....||+
T Consensus 350 ~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~---g~~v~~~~~~lrl 425 (451)
T PRK07678 350 ELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKN---GDTVAGYNNVLTL 425 (451)
T ss_pred HHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeec---CccccCCCCEEEE
Confidence 777777754 1222221 111 223334442110 01 234667778899998532 1000112357999
Q ss_pred ccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 443 GSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 443 g~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+.+.. ++++|++++++.+.+++..
T Consensus 426 ~Ppl~----it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 426 SPPLV----ISSEEIAFIVGTLKTALER 449 (451)
T ss_pred ECCCc----CCHHHHHHHHHHHHHHHHh
Confidence 86643 4689999999999998863
No 349
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.12 E-value=1.4e-07 Score=100.28 Aligned_cols=306 Identities=14% Similarity=0.121 Sum_probs=161.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~p 182 (520)
-.|.|.+|+...+......++ .++. .+ ...+++.+++. ..+. ....+|||+|+.+++... ...
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~-------~~~~--~~--~la~~l~~~~p-~~~~---v~f~~sGseA~e~AlklAr~~tg 134 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYGT-------PTEL--EI--EFAKMLKEAIP-SLEK---VRFVNSGTEAVMTTIRVARAYTG 134 (428)
T ss_pred CCHHHHHHHHHHHHhCCccCC-------CCHH--HH--HHHHHHHHhCC-CCcE---EEEeCCHHHHHHHHHHHHHHhhC
Confidence 468888888877754211111 1121 22 23356666664 1222 234689999999887643 222
Q ss_pred CCEEEEcCCCCCccccccccccccccccccce-----------E------EEEEcccCCCCCCCCHHHHHHHhhhc--CC
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------F------ESMPYRLDESTGLVDYDMLEKTAILF--RP 243 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~-----------~------~~v~~~~d~~~~~iD~d~le~~i~~~--~p 243 (520)
..+|+...-.|.|.-. + .++..+.. + ....++ ..|++.+++.+..+ +.
T Consensus 135 r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 135 RTKIIKFAGCYHGHSD-L------VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEV 201 (428)
T ss_pred CCEEEEECCCcCCChH-H------HHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcE
Confidence 3678877655433210 0 01111100 0 011111 23788998888643 34
Q ss_pred cEEEEcC-CCC-CCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccCC-CCce
Q 010008 244 KLIIAGA-SAY-PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG-PRGG 313 (520)
Q Consensus 244 klIi~~~-s~~-p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~G-prgG 313 (520)
.+||+.. ... +...+ +++|+++|+++|+++|+|++|. |+ -.+.. ..-+. ..|++++ .|.+.| ...|
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~-Rt~~~~a~~~~gv~PDivt~--gK~lggG~Pi~ 277 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AF-RFMYGGAQDLLGVEPDLTAL--GKIIGGGLPIG 277 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-cc-ccCcchhhHHhCCCCCeeee--chhhcCCCcee
Confidence 5666652 122 22344 8999999999999999999975 33 11100 00011 3688755 599854 3346
Q ss_pred EEEeeCCCcchhhHHHhhcc--cCC-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CCC
Q 010008 314 MIFFKKDPVLGVELESAINN--AVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY 386 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~--~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G~ 386 (520)
.+++++ ++.+.+.. ..+ .++.++......+++ +.|+.+.+++ ..+++.+..++|.+.|++ .++
T Consensus 278 av~~~~------~i~~~~~~~~~~~~~~T~~gnpl~~Aaal-a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 347 (428)
T PRK12389 278 AYGGRK------DIMEQVAPLGPAYQAGTMAGNPASMAAGI-ACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKHGI 347 (428)
T ss_pred EEeEHH------HHHhhhccCCCcccccCCccCHHHHHHHH-HHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 667777 66666542 111 223344333333333 3577665433 456666777777777765 343
Q ss_pred EE-ecCCCCCeeEEEEecCCCC---------C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 387 KL-VSGGSDNHLVLVDLRPMGI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 387 ~v-~~~gt~~~~~~vd~~~~g~---------~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
.. +..+. . ++-+.+..... + ...+.+.|.+.||.+... + ...+.+ .+ -++
T Consensus 348 ~~~v~r~~-g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~------~~~~~~---~l---~~t 410 (428)
T PRK12389 348 TITINRLK-G-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPS---K------YEAWFL---TT---AHT 410 (428)
T ss_pred CEEEEecC-c-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecC---C------CCCeee---cC---CCC
Confidence 22 11221 1 22233321111 1 234667777899998532 1 111222 22 267
Q ss_pred HHHHHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHEGVE 469 (520)
Q Consensus 454 ~~d~~~la~~i~~~l~ 469 (520)
++|++++.+.++++++
T Consensus 411 ~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 411 EEDIEETLEAVDRAFA 426 (428)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998875
No 350
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.11 E-value=1.7e-07 Score=100.26 Aligned_cols=322 Identities=17% Similarity=0.145 Sum_probs=168.4
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.. +..+ ..+|. ++...+ ..++++++++-..+. ....+||++|+.+++.-. ..
T Consensus 87 h~~p~v~~Ai~~ql~~-~~~~--~~~~~--~~~~~~----lae~L~~~~p~~~~~---v~f~~sGseAve~AlklAr~~t 154 (459)
T PRK06082 87 YGHPHVIEKVKEQMAK-LPFS--PRRFT--NETAIE----CAEKLTEIAGGELNR---VLFAPGGTSAIGMALKLARHIT 154 (459)
T ss_pred CCCHHHHHHHHHHHHh-CCCc--cCccC--CHHHHH----HHHHHHHhCCCCCCE---EEECCCcHHHHHHHHHHHHHhc
Confidence 3578899998887753 3221 11221 222222 336777777533222 245688999999877633 22
Q ss_pred CCCEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC-CC-CCC------HHHHHHHhhhc
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LVD------YDMLEKTAILF 241 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~-~~-~iD------~d~le~~i~~~ 241 (520)
...+|+...-.|.|.- .+ .+.+.+. .+..++.+.... .+ ..| ++.+++.+...
T Consensus 155 gr~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 155 GNFKVVSLWDSFHGAS-LD------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred CCCEEEEEeCCCcCcc-HH------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 2367887765443321 11 0111110 011122111000 00 011 35577776531
Q ss_pred -CCcEEEEcCCC-CCC-CCC---HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCCC--
Q 010008 242 -RPKLIIAGASA-YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP-- 310 (520)
Q Consensus 242 -~pklIi~~~s~-~p~-~~d---~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~Gp-- 310 (520)
+..+||+.... .+. ..+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|++++ .|.++|.
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~~--gKgl~gG~~ 304 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILCI--GKGLGGGLV 304 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEEe--cccccCCCC
Confidence 34566665221 112 233 8999999999999999999975 43212210 0 0011 3688874 5999652
Q ss_pred CceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEE
Q 010008 311 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKL 388 (520)
Q Consensus 311 rgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v 388 (520)
..|.+++++ ++..........++.+++.....++++ .|+.+.+++ ..+++.++.++|.+.|++. .+.+
T Consensus 305 P~~av~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa~a-~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~ 374 (459)
T PRK06082 305 PIAAMITKD------KYNTAAQISLGHYTHEKSPLGCAAALA-TIEVIEQEG---LLEKVKADSQFMRERLLEMKAKYPL 374 (459)
T ss_pred cceEEEEcH------HHHhhccCCCCCCCCCcCHHHHHHHHH-HHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 457777776 444333221111234443443333333 566654433 4566667777777777652 2322
Q ss_pred ecC--CCCCeeEEEEecCC----CCC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHH
Q 010008 389 VSG--GSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVA 459 (520)
Q Consensus 389 ~~~--gt~~~~~~vd~~~~----g~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~ 459 (520)
+.. |. .-+.-+.+... ..+ ...+...+.+.||.+... ....||+..| ++ ++++|+++
T Consensus 375 i~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------~~~~i~~~Pp-l~---it~~eid~ 440 (459)
T PRK06082 375 IGDVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS---------QGNVIQLSPP-LI---ITREELTQ 440 (459)
T ss_pred eeeeeec-cceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec---------CCCEEEEeCC-Cc---cCHHHHHH
Confidence 221 21 22333444211 011 234556667899988421 1357999755 43 56999999
Q ss_pred HHHHHHHHHHHH
Q 010008 460 IADFIHEGVEIT 471 (520)
Q Consensus 460 la~~i~~~l~~~ 471 (520)
+.+.+++++...
T Consensus 441 ~~~~l~~~l~~~ 452 (459)
T PRK06082 441 ALAILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999998653
No 351
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.11 E-value=8.2e-09 Score=99.77 Aligned_cols=225 Identities=23% Similarity=0.298 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhCCCCCEEEEcCC-CCC------ccccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PHG------GHLSHGFMTPKRRVS 209 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all~pGD~Vl~~~~-~~~------ghls~g~~~~~~~v~ 209 (520)
.|.|| .-+++.||++..- |.+|..||+.|+..++.++++|||+.|...- +|. |.-..+. ..+.
T Consensus 67 RdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~----gSL~ 136 (416)
T COG4100 67 RDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ----GSLK 136 (416)
T ss_pred hhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc----ccHH
Confidence 45666 5678999999753 6788899999999999999999999986531 110 0000000 0111
Q ss_pred cccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCC-CCC---C--CCCHHHHHHHHHHh--CCEEEEechhhc
Q 010008 210 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYP---R--DFDYPRMRQIADAV--GALLMMDMAHIS 281 (520)
Q Consensus 210 ~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s-~~p---~--~~d~~~i~~ia~~~--g~~li~D~Ah~~ 281 (520)
-.|..|+.++ +. .++.+|++.+.+.+++ ++|+|.+--| .|. . ..+++++.++.++. ++++.+|.++ -
T Consensus 137 dfgi~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY-G 211 (416)
T COG4100 137 DFGIKYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY-G 211 (416)
T ss_pred HhCcceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc-h
Confidence 2233344433 43 3689999999999998 9999987532 333 2 34677777777775 7999999983 3
Q ss_pred ccccccccCCCCC-cccEEEeccCcccCCC---CceEEEeeCCCcchhhHHHhhc-ccCCCCCCCCChHHHHHHHHHHHH
Q 010008 282 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN-NAVFPGLQGGPHNHTIGGLAVCLK 356 (520)
Q Consensus 282 gli~~~~~~~p~~-~aDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~l~~~i~-~~~~p~~~g~p~~~~iaala~al~ 356 (520)
.++- ...|.. ++|++.+|+-|.-.|. -||+|.+++ ++.+.-. +...||+ |...-..+. ++.
T Consensus 212 EFvE---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~------~~ve~~~yRlTaPGI-G~e~Gat~~----~l~ 277 (416)
T COG4100 212 EFVE---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA------ELVEAAAYRLTAPGI-GREGGATLY----SLR 277 (416)
T ss_pred hhhh---ccCccccchhhhccceeeCCCCceeeccceeechH------HHHHhhceeeecCCc-cccccccHH----HHH
Confidence 3331 124444 8999999999986542 468999988 5655432 3344554 211111111 233
Q ss_pred HhcCchh--HHHHHHHHHHHHHHHHHHHHCCCEEec
Q 010008 357 HAQSPEF--KVYQNKVVSNCRALASRLVELGYKLVS 390 (520)
Q Consensus 357 ~~~~~~~--~~~~~~i~~na~~l~~~L~~~G~~v~~ 390 (520)
++-+.-| .....+..+-+...+..|.+.|+++.+
T Consensus 278 ~myqGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 278 EMYQGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred HHHhhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 3322112 345666666677777778888998754
No 352
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.10 E-value=8.3e-08 Score=101.63 Aligned_cols=209 Identities=13% Similarity=0.053 Sum_probs=123.8
Q ss_pred HHHHHHhhhcCCcEEEEcCC--CCC-----CCCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEe
Q 010008 232 DMLEKTAILFRPKLIIAGAS--AYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 301 (520)
Q Consensus 232 d~le~~i~~~~pklIi~~~s--~~p-----~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~ 301 (520)
+.+++++.. +.-+||+..- ..+ ....+++++++|+++|+++|+|++| .|+--.|.. . .-.. ..|++++
T Consensus 191 ~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~t~ 268 (422)
T PRK05630 191 RSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIMCV 268 (422)
T ss_pred HHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCeeee
Confidence 344555544 6777777641 222 2335889999999999999999997 554222210 0 0011 3588855
Q ss_pred ccCcccCC--CCceEEEeeCCCcchhhHHHhhccc------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 302 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 302 S~hK~l~G--prgG~I~~~~~~~~~~~l~~~i~~~------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
.|.+.| +.+|++++++ ++.+.+... ....+.++ +...+++...+|+.+.+.++ .+++.++
T Consensus 269 --gK~l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g-~Pla~aaa~aaL~~l~~~~~---~~~~~~~ 336 (422)
T PRK05630 269 --GKALTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMA-NPLACAVAHASLEIIETGMW---RKQVKRI 336 (422)
T ss_pred --echhhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcC-CHHHHHHHHHHHHHHHhCcH---HHHHHHH
Confidence 599955 5788888887 565554321 11122333 33344444446777654333 4566666
Q ss_pred HHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCcccc
Q 010008 374 CRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 450 (520)
Q Consensus 374 a~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~ 450 (520)
.++|.+.|++. ....+.. | ...+.-+.+... .+...+.+.|.+.||.+... ...+|+. |.++
T Consensus 337 g~~l~~~L~~l~~~~~v~~vRg-~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~~----------g~~l~~~-PpL~-- 401 (422)
T PRK05630 337 EAELIAGLSPLAHLPGVADVRV-LGAIGVVEMEQP-VDMEEATQAAVDHGVWLRPF----------GRLVYVM-PPYI-- 401 (422)
T ss_pred HHHHHHHHHHhhcCCCeeeeec-cccEEEEEECCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEE-CCcc--
Confidence 77777766642 1222221 1 123444555321 23456777888999998421 1468995 4455
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 010008 451 GFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 451 g~~~~d~~~la~~i~~~l~~ 470 (520)
++++|++++.+.+++++..
T Consensus 402 -it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 -TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred -CCHHHHHHHHHHHHHHHhc
Confidence 5799999999999999864
No 353
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.09 E-value=8.6e-08 Score=101.89 Aligned_cols=309 Identities=16% Similarity=0.130 Sum_probs=159.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-CCCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 183 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l~pG 183 (520)
-.|.|.+|+...+..... +.. +...++| ..+++.+++... +. ....+||++|+.+++... .-.|
T Consensus 65 ~~p~v~~Ai~~q~~~~~~-------~~~--~~~~~~~--la~~l~~~~p~~-~~---v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 65 AYPPVVEAVREALQDGCN-------FTR--PSAIELD--AAESFLELIDGA-DM---VKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CCHHHHHHHHHHHHhCcC-------CCC--CCHHHHH--HHHHHHHhCCcc-ce---EEEecCHHHHHHHHHHHHHHHhC
Confidence 468888888877764321 111 1111222 335677776321 11 244689999999888743 2234
Q ss_pred -CEEEEcC--CCCCcc-ccccccccccccccccce----EEEEEcccCCCCCCCCHHHHHHHhhhc--CCcEEEEcC--C
Q 010008 184 -DRIMGLD--LPHGGH-LSHGFMTPKRRVSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA--S 251 (520)
Q Consensus 184 -D~Vl~~~--~~~~gh-ls~g~~~~~~~v~~~g~~----~~~v~~~~d~~~~~iD~d~le~~i~~~--~pklIi~~~--s 251 (520)
.+|+... .-|+.+ ..||.. .. ..+.. ..+..++ .-|++++++++... +..+||+.. +
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~~----~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Epv~g 198 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGTT----PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEPATA 198 (431)
T ss_pred CCeEEEeccCccccccccccccC----CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEccccC
Confidence 3555441 111101 012210 00 00100 0111111 23789999888642 345666642 1
Q ss_pred CCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccc-cCCCCC-cccEEEeccCcccCC-CCceEEEeeCCCcchhhHH
Q 010008 252 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELE 328 (520)
Q Consensus 252 ~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~~~~~~~l~ 328 (520)
..|....+++|+++|+++|+++|+|++| .|+...+. ...-+. ..|++++ .|.++| ..+|.+++++ ++.
T Consensus 199 ~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t~--gK~lggG~p~~av~~~~------~i~ 269 (431)
T PRK06209 199 DEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSCF--GKALGNGFAVSALAGKR------EYM 269 (431)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceeee--hhhhcCCcccEEEEEHH------HHH
Confidence 2223345899999999999999999998 66532110 000011 2577555 599964 4568888877 555
Q ss_pred Hh--hc----ccCC-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH----CCCEEe-c-CCCCC
Q 010008 329 SA--IN----NAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLV-S-GGSDN 395 (520)
Q Consensus 329 ~~--i~----~~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~----~G~~v~-~-~gt~~ 395 (520)
+. +. ...| .+..-+++...+++..++|+.+.+++ ..+++.++.++|.+.|++ .++... . .|...
T Consensus 270 ~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~ 346 (431)
T PRK06209 270 ELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPC 346 (431)
T ss_pred hhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceE
Confidence 54 21 1111 11122234444555555677776543 355666666777776654 344321 1 12211
Q ss_pred eeEEEEecCCCCCH----HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPMGIDG----ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 396 ~~~~vd~~~~g~~~----~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+.++...+.+... ..+.+.|.+.||.+ | + ++|+. .++++|++++.+.+++++...
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-----p----~-----l~is~------~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 347 CLTYSTLDGNGQPSQAFRTLFLQETIRRGVLM-----P----S-----LVVSY------AHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred EEEEecCCcccCCcHHHHHHHHHHHHHCCccc-----c----c-----ccccc------cCCHHHHHHHHHHHHHHHHHH
Confidence 22222111111111 23556677889875 1 1 34442 256899999999999998764
No 354
>PRK05965 hypothetical protein; Provisional
Probab=99.09 E-value=2.1e-07 Score=99.57 Aligned_cols=327 Identities=15% Similarity=0.089 Sum_probs=167.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 180 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all---- 180 (520)
-.|.|.+|+.+.+.+- ....+ .+...++ ...+ ..+++.+++..+.+. ....+|||+|+.+++....
T Consensus 63 ~~p~i~~Ai~~q~~~~-~~~~~--~~~~~~~---~~~~-lae~L~~~~p~~~~~---v~f~~sGSEAve~AlKlAr~~~~ 132 (459)
T PRK05965 63 GQESIVEAAAEQMREL-PYATG--YFHFGSE---PAIR-LAAKLAERAPGSLNH---VYFTLGGSDAVDSAVRFIRHYWN 132 (459)
T ss_pred CCHHHHHHHHHHHHhc-CCccc--ccccCCH---HHHH-HHHHHHhhCCCCcCE---EEEeCChhHHHHHHHHHHHHHHH
Confidence 4688889888877642 11000 0001112 1122 335666766432221 2345789999998876421
Q ss_pred ---CCC-CEEEEcCCCCCccccc-----ccccccccc--ccccceEEEEEcccCC-CCCCCC--------HHHHHHHhhh
Q 010008 181 ---KPH-DRIMGLDLPHGGHLSH-----GFMTPKRRV--SGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAIL 240 (520)
Q Consensus 181 ---~pG-D~Vl~~~~~~~ghls~-----g~~~~~~~v--~~~g~~~~~v~~~~d~-~~~~iD--------~d~le~~i~~ 240 (520)
++| .+|+..+-.|.|.-.. +........ ...+ ...++++... ....-| ++++++.+..
T Consensus 133 ~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 210 (459)
T PRK05965 133 ATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPW--QHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAE 210 (459)
T ss_pred hcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCC--CEEcCCCcccccccCCChHHHHHHHHHHHHHHHHh
Confidence 133 5788887655332100 000000000 0001 1122222100 001113 2567777753
Q ss_pred c---CCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcccC
Q 010008 241 F---RPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 308 (520)
Q Consensus 241 ~---~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~l~ 308 (520)
. +.-+||+..- ...+ ..-+++++++|++||+++|+|+.+. |+--.|.. ..-+. ..|+++++ |.|+
T Consensus 211 ~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~ 287 (459)
T PRK05965 211 LGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA--KGLT 287 (459)
T ss_pred cCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeEEec--hhhc
Confidence 2 3456676522 1222 2237899999999999999999853 43111110 00011 36999887 9986
Q ss_pred CC--CceEEEeeCCCcchhhHHHhhccc-------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Q 010008 309 GP--RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 379 (520)
Q Consensus 309 Gp--rgG~I~~~~~~~~~~~l~~~i~~~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~ 379 (520)
|. ..|.+++++ ++.+.+... ...++.++......++++ .|+.+.+++ ..+++.+..++|.+
T Consensus 288 gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a-~L~~l~~~~---l~~~~~~~g~~l~~ 357 (459)
T PRK05965 288 SGYVPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLE-VLRLYHEGG---LLANGQKAGPRFAA 357 (459)
T ss_pred cCCcceeEEEEcH------HHHHHHhccccccccccccCCCCCCHHHHHHHHH-HHHHHHhcc---HHHHHHHHHHHHHH
Confidence 53 467777877 565555321 112233443333334443 466665433 34556666777777
Q ss_pred HHHHC-CCEEecC--CCCCeeEEEEecCC-----CCC-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCC
Q 010008 380 RLVEL-GYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPA 446 (520)
Q Consensus 380 ~L~~~-G~~v~~~--gt~~~~~~vd~~~~-----g~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~ 446 (520)
.|++. .+.++.. |. ..+.-+.+... ..+ ...+.+.+.+.||.+.. .+...||+..|
T Consensus 358 ~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~---------~g~~~i~~~Pp- 426 (459)
T PRK05965 358 GLDALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA---------FGDGVLGFAPA- 426 (459)
T ss_pred HHHhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe---------cCCcEEEEECC-
Confidence 77662 2222221 11 12233444211 001 23466677889999842 12356899654
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
++ ++++|++++.+.+.++++.
T Consensus 427 L~---it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 427 LC---CTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred Cc---CCHHHHHHHHHHHHHHHHH
Confidence 44 5799999999999999974
No 355
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.08 E-value=1.4e-07 Score=95.97 Aligned_cols=285 Identities=17% Similarity=0.107 Sum_probs=167.1
Q ss_pred HHHHHHHHcCCCCCCCceeeecCChH-HHHHHHHHhh---CCCCCEEEEcCCCCCccccccccccccccccccceEEEEE
Q 010008 144 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 219 (520)
Q Consensus 144 a~~~~~~lfg~~~~~~~~~V~~~sGs-~A~~~~l~al---l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~ 219 (520)
-+..+++|.|.+-. |-...-++ .+-.++.++. -++..+++++.-.|.-++.-- .-...+.+++++.
T Consensus 125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEE
Confidence 34667888898752 33233343 3334455554 233689998887665443211 1123344456666
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cc
Q 010008 220 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 296 (520)
Q Consensus 220 ~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~a 296 (520)
++.+ |.+++++. ....+-.+++.+|+.-+ ..|+++|.+++|++|+++++= +..++.++...|-+ |+
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCC
Confidence 5443 77888877 44367788898888654 557999999999999988873 33444455556666 89
Q ss_pred cEEEeccCc-----ccCCCCceEEEeeCCC-----c------------c-----hhhHHHhhcccCCCCCCCCChHHHHH
Q 010008 297 DVVTTTTHK-----SLRGPRGGMIFFKKDP-----V------------L-----GVELESAINNAVFPGLQGGPHNHTIG 349 (520)
Q Consensus 297 Div~~S~hK-----~l~GprgG~I~~~~~~-----~------------~-----~~~l~~~i~~~~~p~~~g~p~~~~ia 349 (520)
||++++++- +|+||..|+..++++. + . +..-++.|++..-....+ .+..+.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC--TnQaLl 341 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC--TNQALL 341 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh--HHHHHH
Confidence 999999996 3688999999998741 0 0 011122232211111111 122333
Q ss_pred HHHHHH--HHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcC
Q 010008 350 GLAVCL--KHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNK 425 (520)
Q Consensus 350 ala~al--~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~ 425 (520)
|+++++ -.+...+.++..+++.+.+.+++++|++ .|++++.. .++--+-++-.......+.+.....||-+..
T Consensus 342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~ 418 (450)
T COG0403 342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPEEVAEALLAAAIAGGINLRR 418 (450)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecchhHHHHHHHHHHhcCCceee
Confidence 333332 2334456799999999999999999995 56888753 2322222321110122333444456666643
Q ss_pred CCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 426 NSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 426 ~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
- .+..+=++....+ +++|++.+++.+...
T Consensus 419 ~---------~~~~~~ia~tEt~----t~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 V---------DADTVLIALTETT----TKEDIDALVAAFGGV 447 (450)
T ss_pred e---------cCCceEEEeeccc----CHHHHHHHHHHHhhh
Confidence 1 1234555555444 479999998887643
No 356
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=1e-07 Score=101.80 Aligned_cols=329 Identities=16% Similarity=0.140 Sum_probs=168.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh--CC
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 181 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al--l~ 181 (520)
.-.|.|.+|+...+.+.. +....++. ++ ...++ .+++.+++....+. ....+|||+|+.+++... ..
T Consensus 69 h~~p~i~~Ai~~ql~~~~---~~~~~~~~-~~---~~~~l-ae~L~~~~p~~~~~---v~f~~SGsEA~e~AlklAr~~t 137 (457)
T PRK05639 69 YSHPKLVKAVQEQVALIQ---HSMIGYTH-SE---RAIRV-AEKLAEISPIENPK---VLFGLSGSDAVDMAIKVSKFST 137 (457)
T ss_pred CCCHHHHHHHHHHHHhcc---ccccCccC-CH---HHHHH-HHHHHhhCCCCcCE---EEEeCchHHHHHHHHHHHHHhc
Confidence 357888888887775421 11111111 11 11222 35666776543222 234689999999887643 22
Q ss_pred CCCEEEEcCCCCCccccccccc-------cccccc-cccceEEEEEcccCCC-----CCCCCHH--------HHHHHhh-
Q 010008 182 PHDRIMGLDLPHGGHLSHGFMT-------PKRRVS-GTSIYFESMPYRLDES-----TGLVDYD--------MLEKTAI- 239 (520)
Q Consensus 182 pGD~Vl~~~~~~~ghls~g~~~-------~~~~v~-~~g~~~~~v~~~~d~~-----~~~iD~d--------~le~~i~- 239 (520)
...+|+...-.|.|.- .+... ...... ... .+..++++.... +..-|.+ .+++.+.
T Consensus 138 gr~~ii~~~~~yHG~t-~~a~s~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~ 215 (457)
T PRK05639 138 RRPWILAFIGAYHGQT-LGATSVAAFQSSQKRGFSPLMP-NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFS 215 (457)
T ss_pred CCCeEEEECCCcCCcc-HHHHHHcCCCcccccCCCCCCC-CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 3357877765543321 00000 000000 000 112233321000 0001222 3444432
Q ss_pred ----hcCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEEEeccCcc
Q 010008 240 ----LFRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKS 306 (520)
Q Consensus 240 ----~~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv~~S~hK~ 306 (520)
..+..+||+..- ..++ .--+++++++|+++|+++|+|++|. |+--.|.. ..-+. ..|++++ .|.
T Consensus 216 ~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~~--gK~ 292 (457)
T PRK05639 216 HVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLIIF--GKG 292 (457)
T ss_pred hhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEEe--chh
Confidence 124566777521 1112 2238899999999999999999986 54222210 00111 3688885 599
Q ss_pred cC-CCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--
Q 010008 307 LR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-- 383 (520)
Q Consensus 307 l~-GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-- 383 (520)
++ |...|.+++++ ++.+......+ ++.+++.....++++ +|+.+.+.+ ..++..+..++|.+.|++
T Consensus 293 l~gG~pi~av~~~~------~i~~~~~~~~~-~T~~g~p~~~aaa~a-~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~ 361 (457)
T PRK05639 293 VASGMGLSGVIGRK------ELMDLTSGSAL-LTPAANPVISAAAEA-TLEIIEEEN---LLKNALKVGEFIKKRLLEMK 361 (457)
T ss_pred hcCCCcceeEEehH------HHHhhcCCCcc-cCCCcCHHHHHHHHH-HHHHHHHcc---HHHHHHHHHHHHHHHHHHHH
Confidence 96 44448888887 55552221111 233443333333333 576665433 456666667778877766
Q ss_pred CCCEEecC--CCCCeeEEEEecCC-CC-C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHH
Q 010008 384 LGYKLVSG--GSDNHLVLVDLRPM-GI-D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKE 456 (520)
Q Consensus 384 ~G~~v~~~--gt~~~~~~vd~~~~-g~-~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d 456 (520)
.++.++.. |. .-+.-+.+... .. + ...+.+.|.+.||.+... ......||+..|. + ++++|
T Consensus 362 ~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-------g~~~~~lr~~Ppl-~---it~~~ 429 (457)
T PRK05639 362 ESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY-------GMFGNVIRITPPL-V---ITKEI 429 (457)
T ss_pred HhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec-------CCCCCEEEEeCCC-c---cCHHH
Confidence 23443321 21 12233333211 10 1 234666777899998431 1124679997653 3 56999
Q ss_pred HHHHHHHHHHHHHHH
Q 010008 457 FVAIADFIHEGVEIT 471 (520)
Q Consensus 457 ~~~la~~i~~~l~~~ 471 (520)
++++.+.++++++..
T Consensus 430 id~~~~~l~~~l~~~ 444 (457)
T PRK05639 430 AEKGLEIMERAIKDA 444 (457)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 357
>PRK07481 hypothetical protein; Provisional
Probab=99.07 E-value=1.9e-07 Score=99.70 Aligned_cols=184 Identities=17% Similarity=0.259 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhCCEEEEechhhcccccccc-c-CCCCC-cccEEEeccCcccCCC--CceEEEeeCCCcchhhHHHhhcc
Q 010008 259 YPRMRQIADAVGALLMMDMAHISGLVAASV-V-ADPFK-YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN 333 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~-~~p~~-~aDiv~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~ 333 (520)
+++++++|+++|+++|.|+.+. |+--.+. . ..-+. ..|+++.+ |.++|. ..|.+++++ ++.+.+..
T Consensus 236 l~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~------~i~~~~~~ 306 (449)
T PRK07481 236 WPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVPLGATMVNA------RIADAFEA 306 (449)
T ss_pred HHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcCceEEEEcH------HHHHHHhc
Confidence 8899999999999999999864 4321111 0 00011 36898886 999652 467777777 56655542
Q ss_pred c-------CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEecC--CCCCeeEEEEe
Q 010008 334 A-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG--GSDNHLVLVDL 402 (520)
Q Consensus 334 ~-------~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~~--gt~~~~~~vd~ 402 (520)
. ...++.++......+++ ..|+.+.+++ ..+++.+..+.|.+.|++. .+.++.. |. ..+.-+++
T Consensus 307 ~~~~~~~~~h~~T~~gnpl~~aaa~-a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l 381 (449)
T PRK07481 307 NADFGGAIMHGYTYSGHPVACAAAL-ATLDIVVRED---LPANAAKRGAYLLEGLQPLKERFELVGDVRGK-GLMLALDL 381 (449)
T ss_pred cCccccccccCCCCCCCHHHHHHHH-HHHHHHHhhh---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEeec-ceEEEEEe
Confidence 1 11223334333333333 3566655433 3455666667777777652 2333221 21 22333444
Q ss_pred cCCC-----CC-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 403 RPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 403 ~~~g-----~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.... .+ ...+.+.|.+.||.+... ...+||..| ++ ++++|++++.+.++++++.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----------g~~i~l~Pp-l~---it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 382 VADKATREPIDPSKGYANAVADVARENGVLVRPS----------GTKIILSPP-LV---IQREDVDRIVDALDAGLSA 445 (449)
T ss_pred cccccccCCCCchhHHHHHHHHHHHhCCeEEEec----------CCEEEEECC-CC---CCHHHHHHHHHHHHHHHHh
Confidence 2110 01 234666777899998421 135898654 43 5699999999999998864
No 358
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=2.9e-07 Score=98.58 Aligned_cols=321 Identities=17% Similarity=0.118 Sum_probs=168.9
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+- ..+.. +...++. .+ ...+++++++....+. ....+|||+|+.+++....
T Consensus 72 h~~p~v~~Ai~~ql~~l-~~~~~---~~~~~~~--~~--~lae~L~~~~p~~~~~---v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNKI-AHSTL---LGLANVP--SI--LLAEKLIEVVPEGLKK---VFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHhC-CCccc---cccCCHH--HH--HHHHHHHHhCCCCCCE---EEEeCCcHHHHHHHHHHHHHHH
Confidence 45788888888877642 11111 1111221 12 2335677776533221 3456899999998876432
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEccc--C-CCCC------CCCHHHH
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRL--D-ESTG------LVDYDML 234 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~--d-~~~~------~iD~d~l 234 (520)
.+| .+|+...-.|.|.- .+ .+++.+. ....++++. . +... .-|++.+
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t-~~------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDT-IG------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcCCccc-HH------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 243 67888876543321 01 1111110 011122221 0 0000 1235666
Q ss_pred HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEec
Q 010008 235 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTT 302 (520)
Q Consensus 235 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S 302 (520)
++.+... +.-+||+.. ...++ ..-+++++++|+++|+++|+|+.+ .|+--.|.. . .-+. ..|+++++
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~~g 292 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMTAG 292 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeeeee
Confidence 7777532 445667654 12222 123789999999999999999986 443212210 0 0011 36888765
Q ss_pred cCcccCCC--CceEEEeeCCCcchhhHHHhhcc------cCC-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 303 THKSLRGP--RGGMIFFKKDPVLGVELESAINN------AVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 303 ~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~------~~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
|.|.|. ..|.+++++ ++.+.+.. ..+ .++.++......+++ +.|+.+.+++ +.+++.+.
T Consensus 293 --K~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~-a~l~~l~~~~---l~~~~~~~ 360 (460)
T PRK06916 293 --KGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVAL-ANLELYEKTN---LIEQVARK 360 (460)
T ss_pred --hhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCCCHHHHHHHH-HHHHHHHhcc---HHHHHHHH
Confidence 998543 457777776 55554421 112 223444333333333 3566655433 45666667
Q ss_pred HHHHHHHHHHC-CCEEec--CCCCCeeEEEEecCCC-------CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEE
Q 010008 374 CRALASRLVEL-GYKLVS--GGSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGI 440 (520)
Q Consensus 374 a~~l~~~L~~~-G~~v~~--~gt~~~~~~vd~~~~g-------~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~gi 440 (520)
.++|.+.|++. ...++. .|. .-+.-+.+.... .+ +..+...|.+.||.+.. . ...+
T Consensus 361 g~~l~~~l~~l~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~------g~~l 429 (460)
T PRK06916 361 TEYVATQLEDLFALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRP----L------GNTI 429 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEe----c------CCEE
Confidence 77777777652 122221 111 122223332110 01 23466777889999842 1 2478
Q ss_pred EEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 441 RIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 441 Rig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
|+..| ++ ++++|++++.+.+++++..
T Consensus 430 ~~~Pp-l~---it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 430 VFMPP-LA---STIDELDEMLRILYKAISD 455 (460)
T ss_pred EEeCC-cc---cCHHHHHHHHHHHHHHHHh
Confidence 88533 44 6799999999999999864
No 359
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=7.7e-07 Score=95.11 Aligned_cols=321 Identities=12% Similarity=0.086 Sum_probs=169.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+.+ +...... .+ .++ ..++ ..+++.++++...+. ....+|||+|+.+++....
T Consensus 70 h~~p~v~~Ai~~ql~~-~~~~~~~-~~--~~~--~~~~--lAe~L~~~~p~~~~~---v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 70 HANPRINAALKDQLDT-LEHAMLA-GC--THE--PAIE--LAERLAALTGGTLGH---AFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc-cc--CCH--HHHH--HHHHHHHhCCCCCCE---EEEeCCCHHHHHHHHHHHHHHH
Confidence 4578888888877753 2111110 01 111 1222 335677776543221 2346799999998876531
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCCC--CC-------CCCHHHH
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES--TG-------LVDYDML 234 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~~--~~-------~iD~d~l 234 (520)
.+| .+|+...-.|.|.- -+ .+++.|. .+..++++.... .. .-|++++
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t-~g------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGET-IG------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCc-HH------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 223 67888876543321 00 0111110 011222221000 00 0134677
Q ss_pred HHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccEEEec
Q 010008 235 EKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTT 302 (520)
Q Consensus 235 e~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDiv~~S 302 (520)
++.+..+ +..+||+.. ...++ ..-+++++++|++||+++|.|+.+ .|+--.|. .. .-+. ..|+++++
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG~GRtG~~fa~~~~gv~PDivt~g 290 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIA-VGCGRTGTFFACEQAGVWPDFLCLS 290 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCCCcchhHHHhCCCCCCeEeee
Confidence 7777532 455677654 12222 223789999999999999999985 34311121 00 0011 36999886
Q ss_pred cCcccCCC--CceEEEeeCCCcchhhHHHhhccc-----C-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 010008 303 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 374 (520)
Q Consensus 303 ~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~-----~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na 374 (520)
|.+.|. ..|.+++++ ++.+.+... . ..++.++......+++ ..|+.+.+++ ..+++.+..
T Consensus 291 --Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~i~~~~---l~~~~~~~G 358 (453)
T PRK06943 291 --KGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAAL-ATLDLFAEDD---VLARNARKS 358 (453)
T ss_pred --hhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHHHHHHH
Confidence 998543 467777877 565555321 1 1223333333333333 3566665443 345555666
Q ss_pred HHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCC-CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCc
Q 010008 375 RALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAM 447 (520)
Q Consensus 375 ~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g-~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~ 447 (520)
++|.+.|++. ....+.. |. ..+.-+.+.... .. ...+.+.+.+.||.+... ...+|+..| +
T Consensus 359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------g~~l~~~Pp-l 426 (453)
T PRK06943 359 ARLRAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----------GTTVYLMPP-Y 426 (453)
T ss_pred HHHHHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----------CCEEEEeCC-C
Confidence 7777777652 1222211 11 223334453111 11 234666778899998421 135899744 4
Q ss_pred cccCCCHHHHHHHHHHHHHHHHH
Q 010008 448 TTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 448 tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+ ++++|++++.+.+++++..
T Consensus 427 ~---it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 427 V---LDDDEIAWLAERTRATLDA 446 (453)
T ss_pred c---CCHHHHHHHHHHHHHHHHH
Confidence 4 5699999999999999874
No 360
>PRK06149 hypothetical protein; Provisional
Probab=99.03 E-value=5.2e-07 Score=105.03 Aligned_cols=327 Identities=14% Similarity=0.078 Sum_probs=166.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHH---hhCC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK 181 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~---all~ 181 (520)
-.|.|.+|+...+.... . ..+|+ ++...+ + .+++++++.-..+ .....+||++||.+++. ++..
T Consensus 600 ~hp~v~~Ai~~q~~~l~-~---~~~~~--~~~~~e---l-ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLLN-T---NSRFH--YAAVAE---F-SERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhcc-c---ccccc--CHHHHH---H-HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 47899999887775321 1 11332 222222 2 2567777732112 12446899999998887 3332
Q ss_pred CCCEEEEcCCCCCc-cccc----ccccccccc--ccccceEEEEEcccC-CCCC-CCC-----HHHHHHHhhh-----cC
Q 010008 182 PHDRIMGLDLPHGG-HLSH----GFMTPKRRV--SGTSIYFESMPYRLD-ESTG-LVD-----YDMLEKTAIL-----FR 242 (520)
Q Consensus 182 pGD~Vl~~~~~~~g-hls~----g~~~~~~~v--~~~g~~~~~v~~~~d-~~~~-~iD-----~d~le~~i~~-----~~ 242 (520)
..+|+..+-.|.| ++.. +........ ...+ ++..++++-. ...+ ..| .+++++.++. .+
T Consensus 667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~-~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 744 (972)
T PRK06149 667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPD-WVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG 744 (972)
T ss_pred -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCC-CeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence 3567776654422 2100 000000000 0000 1122221100 0001 011 2344433321 13
Q ss_pred CcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhh-cccccccccC-CCCC-cccEEEeccCcccCC-CCc
Q 010008 243 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTTTTHKSLRG-PRG 312 (520)
Q Consensus 243 pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~-~gli~~~~~~-~p~~-~aDiv~~S~hK~l~G-prg 312 (520)
+.+||+.. ++.+...+ +++++++|+++|+++|+|++|. .|-....... .-+. ..|++++ .|.++| -..
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~Pl 822 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHPL 822 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEe--cccccCCeee
Confidence 45666652 22222444 8999999999999999999972 3322110000 0011 3688865 599954 345
Q ss_pred eEEEeeCCCcchhhHHHhhcc-cCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEe
Q 010008 313 GMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 389 (520)
Q Consensus 313 G~I~~~~~~~~~~~l~~~i~~-~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~ 389 (520)
|++++++ ++.+.+.. ..+....++......++++ .|+.+.+++ ..+++.+.-++|.+.|++. ...++
T Consensus 823 ~av~~~~------~i~~~~~~~~~~~sT~~gnP~~~aaala-~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i 892 (972)
T PRK06149 823 GAVITRR------EIAEALEAEGYFFSSTGGSPVSCRIGMA-VLDVLREEK---LQENARRVGDHLKARLEALADRHPLI 892 (972)
T ss_pred EEEEEcH------HHHhhhccCCcccCCCCCCHHHHHHHHH-HHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 8888887 56666543 2222234454444444444 577665433 3455555566777777652 12222
Q ss_pred c--CCCCCeeEEEEecCC----CCC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHH
Q 010008 390 S--GGSDNHLVLVDLRPM----GID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAI 460 (520)
Q Consensus 390 ~--~gt~~~~~~vd~~~~----g~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~l 460 (520)
. .|. ..+.-+.+... .-+ ...+.+.|.+.||.+... | .....|||..| ++ ++++|++++
T Consensus 893 ~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g----~~~~vl~~~Pp-l~---it~~~id~~ 960 (972)
T PRK06149 893 GAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT---G----DHLNILKIKPP-LC---LDRESADFF 960 (972)
T ss_pred EEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEECC-Cc---CCHHHHHHH
Confidence 2 121 12333344211 011 234667778899998531 1 11357999644 44 569999999
Q ss_pred HHHHHHHHHH
Q 010008 461 ADFIHEGVEI 470 (520)
Q Consensus 461 a~~i~~~l~~ 470 (520)
.+.+++++..
T Consensus 961 ~~~l~~~l~~ 970 (972)
T PRK06149 961 VDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHh
Confidence 9999998863
No 361
>PRK07482 hypothetical protein; Provisional
Probab=99.01 E-value=1.1e-06 Score=94.13 Aligned_cols=215 Identities=15% Similarity=0.137 Sum_probs=119.8
Q ss_pred CHHHHHHHhhh---cCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-ccc
Q 010008 230 DYDMLEKTAIL---FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCD 297 (520)
Q Consensus 230 D~d~le~~i~~---~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aD 297 (520)
+++.+++.+.. .+.-+||+..- ...+ .--+++|+++|++||+++|+|+.+. |+--.|. .. .-+. ..|
T Consensus 205 ~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 205 CADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCC
Confidence 45777877742 13456776522 2222 1237899999999999999999853 4311110 00 0011 369
Q ss_pred EEEeccCcccCCC--CceEEEeeCCCcchhhHHHhhcc------cC-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHH
Q 010008 298 VVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN------AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 368 (520)
Q Consensus 298 iv~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~------~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 368 (520)
+++++ |.+.|. ..|.+++++ ++.+.+.. .. ..++.++.... .|+..+.|+.+.+++ ..+
T Consensus 284 iv~~g--Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~-~Aaa~a~L~~~~~~~---l~~ 351 (461)
T PRK07482 284 LITVA--KGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTYSGHPIC-AAAALANLDILEREN---LVG 351 (461)
T ss_pred EEEEc--cccccCccccceeeecH------HHHHHHhcccccCCccccCCCCCcCHHH-HHHHHHHHHHHHhCC---HHH
Confidence 99976 999652 456666666 45554432 11 11233443333 333333577665544 345
Q ss_pred HHHHHHHHHHHHHHHC--CCEEec--CCCCCeeEEEEecCCC-----CC-----HHHHHHHHhhcCeEEcCCCCCCCCCC
Q 010008 369 KVVSNCRALASRLVEL--GYKLVS--GGSDNHLVLVDLRPMG-----ID-----GARVEKILDMASITLNKNSVPGDKSA 434 (520)
Q Consensus 369 ~i~~na~~l~~~L~~~--G~~v~~--~gt~~~~~~vd~~~~g-----~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~ 434 (520)
++.+..++|.+.|++. ...++. .|. ..+.-+.+.... .+ ...+...|.+.||.+.. .|
T Consensus 352 ~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~--~~----- 423 (461)
T PRK07482 352 NAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARA--MP----- 423 (461)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEec--CC-----
Confidence 5566677777777641 222222 111 123334442110 11 23466777889999842 11
Q ss_pred CCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 435 LVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 435 ~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
....+|+..| ++ ++++|++++.+.+++++..
T Consensus 424 -~~~~i~~~Pp-l~---it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 424 -HGDILGFAPP-LV---LTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred -CCCEEEEeCC-CC---CCHHHHHHHHHHHHHHHHH
Confidence 1346898644 44 5799999999999999864
No 362
>PRK07480 putative aminotransferase; Validated
Probab=99.00 E-value=9.5e-07 Score=94.48 Aligned_cols=212 Identities=15% Similarity=0.134 Sum_probs=115.6
Q ss_pred HHHHHHhhh---cCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEE
Q 010008 232 DMLEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 299 (520)
Q Consensus 232 d~le~~i~~---~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv 299 (520)
+.+++.+.. .+..+||+..- ...+ ..+ +++++++|++||+++|+|+.+. |+--.|.. . .-+. ..|++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 284 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-GFGRTGEWFGSQHFGIKPDLM 284 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhhhhhcCCCCCee
Confidence 556555532 13456776522 2222 222 8999999999999999999863 33111210 0 0011 36888
Q ss_pred EeccCcccCCC--CceEEEeeCCCcchhhHHHhhc--ccC--CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHH-HH
Q 010008 300 TTTTHKSLRGP--RGGMIFFKKDPVLGVELESAIN--NAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-VS 372 (520)
Q Consensus 300 ~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~--~~~--~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i-~~ 372 (520)
+++ |.+.|. ..|.+++++ ++.+.+. ... ..++.++... ..++...+|+.+.++++ .+++ .+
T Consensus 285 ~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~gnpl-~~Aaa~a~L~~l~~~~l---~~~~~~~ 352 (456)
T PRK07480 285 TIA--KGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYSGHPV-AAAVALANLRILRDEGI---VERVRDD 352 (456)
T ss_pred eee--hhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCCcCHH-HHHHHHHHHHHHHhCCH---HHHHHHH
Confidence 775 999652 356666666 5655552 121 2233444333 33333345776654443 4444 34
Q ss_pred HHHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCC-----C-C----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCE
Q 010008 373 NCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-----I-D----GARVEKILDMASITLNKNSVPGDKSALVPGG 439 (520)
Q Consensus 373 na~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g-----~-~----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~g 439 (520)
..+.|.+.|++. ...++.. |. ..+.-+.+.... . + ...+.+.|.+.||.+... ...
T Consensus 353 ~g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------~~~ 421 (456)
T PRK07480 353 TGPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV----------GDR 421 (456)
T ss_pred HHHHHHHHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec----------CCE
Confidence 556666666552 1222211 11 123333442110 0 1 234556677899998421 246
Q ss_pred EEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 440 IRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 440 iRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+|+..| ++ ++++|++++.+.+++++...
T Consensus 422 l~~~Pp-l~---it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 422 MIISPP-LV---ITHAEIDELVEKARKALDAT 449 (456)
T ss_pred EEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 899744 44 56999999999999998753
No 363
>PRK07483 hypothetical protein; Provisional
Probab=99.00 E-value=3.6e-07 Score=97.38 Aligned_cols=219 Identities=18% Similarity=0.205 Sum_probs=121.0
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--CCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccE
Q 010008 232 DMLEKTAIL---FRPKLIIAGASA--YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 298 (520)
Q Consensus 232 d~le~~i~~---~~pklIi~~~s~--~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDi 298 (520)
+++++++.. .+..+||+..-. .++ ..-+++++++|++||+++|+|+.+. |+--.|. .. .-+. ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 566665542 134567765321 222 1238899999999999999999864 4321121 00 0011 3689
Q ss_pred EEeccCcccCCC--CceEEEeeCCCcchhhHHHhhccc--CC--CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHH
Q 010008 299 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA--VF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 372 (520)
Q Consensus 299 v~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~--~~--p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~ 372 (520)
++++ |.+.|. ..|.+++++ ++.+.+... .+ ..+.++......+++ +.++.+.+++ ..+++.+
T Consensus 265 v~~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~-a~l~~i~~~~---l~~~~~~ 332 (443)
T PRK07483 265 VTIA--KGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYLGHATACAAAL-AVQRVIAEDG---LLANVRA 332 (443)
T ss_pred eeeh--hhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHHHHH
Confidence 8886 999543 467777877 565555422 11 123344333333333 3566665443 4555666
Q ss_pred HHHHHHHHHHH--CCCEEecC--CCCCeeEEEEecCC-----CCC-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCCC
Q 010008 373 NCRALASRLVE--LGYKLVSG--GSDNHLVLVDLRPM-----GID-----GARVEKILDMASITLNKNSVPGDKSALVPG 438 (520)
Q Consensus 373 na~~l~~~L~~--~G~~v~~~--gt~~~~~~vd~~~~-----g~~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~ 438 (520)
..++|.+.|++ ..+.++.. |. ..+.-+++... ..+ ...+.+.+.+.||.+.... +........
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~~~~~~~~ 409 (443)
T PRK07483 333 RGEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG--GTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC--ccccCCCCC
Confidence 67777777764 22332221 11 12233343211 001 2346677788999984310 000001135
Q ss_pred EEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 439 GIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 439 giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
.||+..| ++ ++++|++++.+++++++..
T Consensus 410 ~l~~~Pp-L~---it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 410 HVLLAPP-FI---ITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEECC-CC---CCHHHHHHHHHHHHHHHHH
Confidence 7999654 54 5799999999999999874
No 364
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=5.4e-08 Score=97.37 Aligned_cols=330 Identities=18% Similarity=0.187 Sum_probs=185.9
Q ss_pred cCCCCC----hHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHH
Q 010008 100 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 174 (520)
Q Consensus 100 asen~~----~~~V~ea~~s~l~~~y~~G~p~~r-yy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~ 174 (520)
+|.||. .+.+.+.....+ .+|.-|.-|-| |||.-..--.+| +++++.+|++.. |...-|-.++..
T Consensus 100 aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF~ti~S 169 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGFSTIES 169 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccccchhhh
Confidence 466764 577888776665 45644443333 777554444566 789999999863 334456588888
Q ss_pred HHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhc------CCc----
Q 010008 175 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPK---- 244 (520)
Q Consensus 175 ~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~------~pk---- 244 (520)
++.|+.+.||.|.+..-.+-+.. +.+.++-- .+..+. ..|+++++....+. +||
T Consensus 170 ~ipafsKrGDIi~~de~~nfaIq--------~GlqlSRS--~i~~Fk------hndm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 170 AIPAFSKRGDIIFVDEAVNFAIQ--------KGLQLSRS--TISYFK------HNDMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred cchhhhccCcEEEEehhhhHHHH--------HHHhhhhh--eeEEec------CCCHHHHHHhccCcchhhhhccccccc
Confidence 99999999999987653221110 11111110 122222 34667776554331 122
Q ss_pred --EEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccc---cc--cC-CCCCcccEEEeccCcccCCCCceE
Q 010008 245 --LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VA-DPFKYCDVVTTTTHKSLRGPRGGM 314 (520)
Q Consensus 245 --lIi~~--~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~---~~--~~-~p~~~aDiv~~S~hK~l~GprgG~ 314 (520)
.|++. +-|++...|+.+|.++..++...++.|++..+|.... |+ +. .+....|++++|+.-.++ -.||+
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s~GgF 312 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-SGGGF 312 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc-ccCce
Confidence 34443 5677779999999999999999999999988887643 22 22 233467899999877764 35677
Q ss_pred EEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCC
Q 010008 315 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGS 393 (520)
Q Consensus 315 I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt 393 (520)
..++.-. -..+++...-+-+....|...+-||.- ++..... + .+..+.++.....+-+.|.. .++.+.+. .
T Consensus 313 c~G~~~i----~~hQrLSg~~Y~fSAslPp~la~aa~~-ai~i~~~-~-p~~~~~L~~k~~~~H~~l~~~s~~~v~~~-~ 384 (467)
T KOG1358|consen 313 CAGKSFI----ADHQRLSGSGYCFSASLPPYLAGAAIK-AILIEEW-N-PEIVQPLRAKVAKFHAALSSNSGFIVSGS-P 384 (467)
T ss_pred eecceee----EeeeeccccceeeeccCchhhhhhHHH-HHHHHhh-C-cchhhhhhccccccchhhhcCCceEEecC-c
Confidence 7774310 012233222111112223333333322 2322211 1 22445555555566667766 35666543 3
Q ss_pred CCeeEEEEecCCCCCHHH--------HHHHHhhcCeEEcCCC-CCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 394 DNHLVLVDLRPMGIDGAR--------VEKILDMASITLNKNS-VPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 394 ~~~~~~vd~~~~g~~~~~--------~~~~L~~~gI~v~~~~-~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
.+.+..+.+.....+.++ +.+.+.+ |+.+.... +-+......+-.|||+.. .+++++|++++++.|
T Consensus 385 ~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~----a~~seeel~ra~~~i 459 (467)
T KOG1358|consen 385 ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVS----AGMSEEELERAAELI 459 (467)
T ss_pred CCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEe----CCCCHHHHHHHHHHH
Confidence 444444445443223222 2222233 66654322 212211223457999754 579999999999999
Q ss_pred HHHHH
Q 010008 465 HEGVE 469 (520)
Q Consensus 465 ~~~l~ 469 (520)
++...
T Consensus 460 k~~~~ 464 (467)
T KOG1358|consen 460 KEVAS 464 (467)
T ss_pred HHHHH
Confidence 88654
No 365
>PRK06148 hypothetical protein; Provisional
Probab=98.98 E-value=6.4e-07 Score=104.42 Aligned_cols=322 Identities=17% Similarity=0.183 Sum_probs=169.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-C-CC
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-KP 182 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al-l-~p 182 (520)
-.|.|.+|+...+..... ..+|. ++ ... ...+++++++.-..+ .....+|||+||.+++... . ..
T Consensus 639 ~hp~v~~Ai~~q~~~l~~----~~~~~--~~---~~~-~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARLNT----NTRYL--HD---AIV-AYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CCHHHHHHHHHHHhhcCC----cCCcC--CH---HHH-HHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 468999998887754211 11221 12 112 233567776643222 1244689999999887643 2 22
Q ss_pred CCEEEEcCCCCCcccccccccccccccccc------------ceEEEEEcccC-CCCCC-CC-------HHHHHHHhhh-
Q 010008 183 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLD-ESTGL-VD-------YDMLEKTAIL- 240 (520)
Q Consensus 183 GD~Vl~~~~~~~ghls~g~~~~~~~v~~~g------------~~~~~v~~~~d-~~~~~-iD-------~d~le~~i~~- 240 (520)
..+|+..+-.|.|.- .+ .+..++ ..+..++++.. ...+. .| .+.+++.+..
T Consensus 706 r~~ii~~~~~YHG~t-~~------a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 706 QRDAIVLDHAYHGTT-TE------LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred CCeEEEEcCCccCCC-cc------hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 357887775543321 11 011111 00111111100 00011 11 1345555531
Q ss_pred ----cCCcEEEEcC-CCCCC-CC----CHHHHHHHHHHhCCEEEEechhh-cccccccccC-CCCC-cccEEEeccCccc
Q 010008 241 ----FRPKLIIAGA-SAYPR-DF----DYPRMRQIADAVGALLMMDMAHI-SGLVAASVVA-DPFK-YCDVVTTTTHKSL 307 (520)
Q Consensus 241 ----~~pklIi~~~-s~~p~-~~----d~~~i~~ia~~~g~~li~D~Ah~-~gli~~~~~~-~p~~-~aDiv~~S~hK~l 307 (520)
.++.+||+.. ...++ .. -+++++++|+++|+++|+|+.+. .|-....... .-+. ..|+++.+ |.+
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~g--K~l 856 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMG--KPI 856 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeec--ccc
Confidence 2355677652 12222 22 28899999999999999999863 2222110000 0011 36898875 998
Q ss_pred C-CCCceEEEeeCCCcchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-
Q 010008 308 R-GPRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 384 (520)
Q Consensus 308 ~-GprgG~I~~~~~~~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~- 384 (520)
+ |...|.+++++ ++.+.+.... +.++.++......++++ .|+.+.+++ ..+++.+..++|.+.|++.
T Consensus 857 ggG~Plgav~~~~------ei~~~~~~g~~~~~Tf~gnpla~aaa~a-~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~ 926 (1013)
T PRK06148 857 GNGHPMGAVVTTR------EIADSFDNGMEYFNTFGGNPVSCAIGLA-VLDIIEDED---LQRNALEIGNYLLAGLRELQ 926 (1013)
T ss_pred cCCcceEEEEEcH------HHHhhccCCCccccCCCCCHHHHHHHHH-HHHHHhhcc---HHHHHHHHHHHHHHHHHHHH
Confidence 5 44457788877 6766665432 33445554444444444 477665433 4555666677777777652
Q ss_pred -CCEEec--CCCCCeeEEEEecCCC----CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCH
Q 010008 385 -GYKLVS--GGSDNHLVLVDLRPMG----ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSE 454 (520)
Q Consensus 385 -G~~v~~--~gt~~~~~~vd~~~~g----~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~ 454 (520)
.+.++. .|. ..+.-+.+.... -+ ...+.+.|.+.||.+... | + ....|||..| ++ +++
T Consensus 927 ~~~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g---~-~~~vlr~~Pp-l~---it~ 994 (1013)
T PRK06148 927 DRFDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---G---P-HDNVLKIRPP-LI---FSR 994 (1013)
T ss_pred HhCCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---C---C-CCCEEEEeCC-cc---CCH
Confidence 222221 111 123334442110 11 234666777899998531 1 1 1367999755 44 569
Q ss_pred HHHHHHHHHHHHHHHH
Q 010008 455 KEFVAIADFIHEGVEI 470 (520)
Q Consensus 455 ~d~~~la~~i~~~l~~ 470 (520)
+|++++.+.+++++..
T Consensus 995 ~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 995 ADADHLLEVLDDVLAA 1010 (1013)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 366
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.98 E-value=8.5e-08 Score=95.91 Aligned_cols=333 Identities=14% Similarity=0.148 Sum_probs=186.8
Q ss_pred cceEecCCCCChHHHHHHHhhhhhccCCCCCCC-CCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 95 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 95 ~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~-~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
..++.+++.-+|+.|++.....+.+-..-|+.- .+-+.+.++...++ .+++.++++++++.+ +.+.+...+++.+..
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~-~a~~~lreLl~iPd~-Y~VlflqGGat~qf~ 83 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLE-EAEKDLRELLNIPDD-YKVLFLQGGATGQFA 83 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCccHHHHH
Confidence 356667777789999998887776554333320 11122334444444 567899999999865 334454555567888
Q ss_pred HHHHhhCCCCCE--EEEcCCCCCccccccccccccccccccceEEEEEccc-CC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 010008 174 EVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DE-STGLVDYDMLEKTAILFRPKLIIAG 249 (520)
Q Consensus 174 ~~l~all~pGD~--Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~-d~-~~~~iD~d~le~~i~~~~pklIi~~ 249 (520)
++.+.|+..+.. |....... .+.. -+...+....+..... .. -...+|++... +.+ +...|.++
T Consensus 84 ~~p~nLl~~~~~~yv~~g~Ws~---~a~~------eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~ 151 (365)
T COG1932 84 MAPMNLLGKRGTDYVDTGAWSE---FAIK------EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFC 151 (365)
T ss_pred HHHHhhhcccCceeEeeeehhH---hHHH------HHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEe
Confidence 888999866543 54332211 1001 0111111001100000 00 11244555432 212 22224444
Q ss_pred CCCC--CCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCcccCCCCc-eEEEeeCCCcchhh
Q 010008 250 ASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 326 (520)
Q Consensus 250 ~s~~--p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~ 326 (520)
.... +..++ ..-.+.. +.++++|++ ++.... +.++..-|++.++.+|.+ ||-| ++++.++ +
T Consensus 152 ~NeTi~Gv~v~--~~p~~~~--~~~~v~D~S--S~ilsr---~iDvsk~dviyagaQKnl-GpaGltvvIvr~------~ 215 (365)
T COG1932 152 WNETISGVEVP--ELPDIGS--DGLLVADAS--SAILSR---PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------D 215 (365)
T ss_pred cCCcccceEcc--CCCCCCC--CceEEEecc--cHHhcC---CCChhHcceEEEehhhcc-CccceEEEEEcH------H
Confidence 3222 22222 1111111 289999986 333221 223335789999999998 5666 8888888 5
Q ss_pred HHHhhcccCCC------------CCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHCCCEE--ecC
Q 010008 327 LESAINNAVFP------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKL--VSG 391 (520)
Q Consensus 327 l~~~i~~~~~p------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~~G~~v--~~~ 391 (520)
+..++.....| .+..+|.+..+.-+...|+.+...+ .+...++-.++++.|.+.+.+.+|-. +.+
T Consensus 216 ~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~ 295 (365)
T COG1932 216 LLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK 295 (365)
T ss_pred HHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 66655443122 1246777777777777788776544 58888999999999999998876532 222
Q ss_pred CCCCee-EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 392 GSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 392 gt~~~~-~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
...+.+ +.+++....++ +.+...++++|....++ +. ..+|+|++.- + .+..++++.++++++...+
T Consensus 296 ~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkG----hr---~vgGmRasiy--n--A~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 296 ANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKG----HR---SVGGLRASIY--N--AVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred hhccceeEEEEcCcHHHH-HHHHHHHHHcCCceecc----cc---CCCceeeeee--c--CCCHHHHHHHHHHHHHHHH
Confidence 222222 23444433333 33445566777776443 22 3578999863 2 2668999999999988764
No 367
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.94 E-value=1.2e-06 Score=93.89 Aligned_cols=331 Identities=14% Similarity=0.155 Sum_probs=165.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCC--CCceeeecCChHHHHHHHHHhh-C
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN--KWGVNVQPLSGSPANFEVYTAI-L 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~--~~~~~V~~~sGs~A~~~~l~al-l 180 (520)
.-.|.|.+|+...+.+....... . +. ++.. .+++ +++.+++.-+.. .. +.....|||+|+.+++... .
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~~~--~-~~-~~~~---~~la-~~L~~~~p~~~~~~~~-v~f~~~SGSEAve~AlklAr~ 149 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLHTL--D-LT-TPVK---DQFV-QDLFASLPEAFAREAK-IQFCGPTGTDAVEAALKLVKT 149 (464)
T ss_pred CCCHHHHHHHHHHHHhhhccccc--c-cC-CHHH---HHHH-HHHHHhCcccccccce-EEEeCCCcHHHHHHHHHHHHH
Confidence 45789999998887643211110 1 11 2211 1222 445555432110 01 2222369999999887643 2
Q ss_pred CCC-CEEEEcCCCCCcccccccccccccc----ccccc--eEEEEEcccCCC-C--------CCCCHHHHHHHhhhc---
Q 010008 181 KPH-DRIMGLDLPHGGHLSHGFMTPKRRV----SGTSI--YFESMPYRLDES-T--------GLVDYDMLEKTAILF--- 241 (520)
Q Consensus 181 ~pG-D~Vl~~~~~~~ghls~g~~~~~~~v----~~~g~--~~~~v~~~~d~~-~--------~~iD~d~le~~i~~~--- 241 (520)
-+| .+|+...-.|.|.- .+........ .+.+. .+..++++.... . ...+.+.+++.+...
T Consensus 150 ~tgr~~ii~~~~~yHG~t-~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 228 (464)
T PRK06938 150 ATGRSTVLSFQGGYHGMS-QGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESG 228 (464)
T ss_pred hhCCCeEEEECCccCCcc-HHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccC
Confidence 233 67887765543321 1100000000 00000 112233321100 0 012356777777542
Q ss_pred --CCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccEEEeccCcccCC-
Q 010008 242 --RPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG- 309 (520)
Q Consensus 242 --~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDiv~~S~hK~l~G- 309 (520)
+.-+||+..- ..++ .--+++++++|+++|+++|+|+.+. |+--.|. .. .-+. -.|+++++ |.+.|
T Consensus 229 ~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~~g--KglggG 305 (464)
T PRK06938 229 VVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGIIPDVVVLS--KAIGGS 305 (464)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCCCCCEEEee--ccccCC
Confidence 3456676521 1222 2238899999999999999999853 4311111 00 0011 36999886 99854
Q ss_pred CCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCE
Q 010008 310 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYK 387 (520)
Q Consensus 310 prgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~ 387 (520)
-..|.+++++ ++ +.+......++.++......++++ .|+.+.++ +..+++.+..++|.+.|++. .+.
T Consensus 306 ~PlsAv~~~~------~~-~~~~~~~~~~T~~gnpla~Aaa~a-~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~ 374 (464)
T PRK06938 306 LPLAVVVYRE------WL-DTWQPGAHAGTFRGNQMAMAAGSA-TLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYP 374 (464)
T ss_pred CceEEEeehh------Hh-hccCCCCCCCCCCcCHHHHHHHHH-HHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347777776 43 333322222334443443344443 46655443 34455666666677766552 222
Q ss_pred EecC--CCCCeeEEEEecCC-CC---------C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 388 LVSG--GSDNHLVLVDLRPM-GI---------D---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 388 v~~~--gt~~~~~~vd~~~~-g~---------~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
++.. |. ..+.-+.+... +. + ...+...|.+.||.+... . . ....||+..| ++ +
T Consensus 375 ~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----g--~-~~~~l~~~Pp-l~---i 442 (464)
T PRK06938 375 QLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG----G--R-HGSVVRFLPP-LI---I 442 (464)
T ss_pred Ceeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec----C--C-CCCEEEEECC-Cc---c
Confidence 2221 21 22333444211 10 1 133556677899998431 1 0 1256899644 44 6
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l~~ 470 (520)
+++|++++.+.+++++..
T Consensus 443 t~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 443 TAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 799999999999999874
No 368
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.94 E-value=5.6e-06 Score=88.70 Aligned_cols=187 Identities=18% Similarity=0.263 Sum_probs=103.5
Q ss_pred HHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccEEEeccCcccCC-CCceEEEeeCCCcchhhHHHhhccc
Q 010008 259 YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELESAINNA 334 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDiv~~S~hK~l~G-prgG~I~~~~~~~~~~~l~~~i~~~ 334 (520)
+++++++|+++|+++|.|+.+. |+--.|. .. .-+. ..|+++++ |.++| -..|.++.++ ++ +.+...
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~------~~-~~~~~~ 317 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK------EF-DAWQPG 317 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH------HH-hhccCC
Confidence 8899999999999999999853 4321111 00 0011 36898886 99854 3346666665 43 333322
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC--CCEEec--CCCCCeeEEEEecCC-C---
Q 010008 335 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS--GGSDNHLVLVDLRPM-G--- 406 (520)
Q Consensus 335 ~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~--G~~v~~--~gt~~~~~~vd~~~~-g--- 406 (520)
...++.++......+|++ .|+.+.++++ .+++.+..++|.+.|++. .+.++. .|. ..+.-+.+... .
T Consensus 318 ~~~~T~~gnpla~aaala-~L~~l~~~~l---~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm~giel~~~~~~~~ 392 (459)
T PRK06931 318 GHTGTFRGNQLAMATGLT-TLKILKEENL---AQNAAERGEWLKAQLAELQKRYPCIGNVRGR-GLMIGIEIVDERQPAD 392 (459)
T ss_pred CCCCCCCCCHHHHHHHHH-HHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceEEEEEEccCccccc
Confidence 222333443333333333 5666554443 445555566666666542 122222 121 12233344211 0
Q ss_pred ------CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 407 ------ID---GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 407 ------~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+ ...+.+.|.+.||.+... . .....+|+..| ++ ++++|++++.+.+++++...
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~----~---~~~~~l~~~Pp-l~---it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 393 AMGSYPADGELAAAIQKACFENGLLLERG----G---RNGNVVRLLPP-LL---ITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred ccccCCccHHHHHHHHHHHHHCCcEEeec----C---CCCCEEEEECC-CC---cCHHHHHHHHHHHHHHHHHH
Confidence 01 134556677899998431 1 12356998655 43 57999999999999998753
No 369
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=2.1e-06 Score=92.15 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=120.9
Q ss_pred HHHHHHHhhhc--CCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccE
Q 010008 231 YDMLEKTAILF--RPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 298 (520)
Q Consensus 231 ~d~le~~i~~~--~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDi 298 (520)
++.+++.+..+ +..+||+.. -..++ ..-+++++++|+++|+++|+|+.+. |+--.|. .. ..+. ..|+
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDi 279 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDF 279 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCE
Confidence 45667777532 345666654 12222 1238899999999999999999853 3311111 00 0111 3699
Q ss_pred EEeccCcccCCC--CceEEEeeCCCcchhhHHHhhcc------c-CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHH
Q 010008 299 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN------A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 369 (520)
Q Consensus 299 v~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~------~-~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 369 (520)
++++ |.|.|. ..|.+++++ ++.+.+.. . ...++.++......+++ +.|+.+.+++ ..++
T Consensus 280 v~~g--Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~-a~L~~i~~~~---l~~~ 347 (466)
T PRK07030 280 LCLS--KALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAAL-ATLDIFEQDN---VIEN 347 (466)
T ss_pred Eeee--hhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCCCCHHHHHHHH-HHHHHHHhcC---HHHH
Confidence 9886 998653 467788877 56555432 1 11223344333333333 3577665443 3455
Q ss_pred HHHHHHHHHHHHHHC-CCEEecC--CCCCeeEEEEecCCC-------CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCC
Q 010008 370 VVSNCRALASRLVEL-GYKLVSG--GSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALV 436 (520)
Q Consensus 370 i~~na~~l~~~L~~~-G~~v~~~--gt~~~~~~vd~~~~g-------~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~ 436 (520)
..+..++|.+.|++. ....+.. |. ..+.-+.+.... .+ ...+.+.+.+.||.+...
T Consensus 348 ~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------- 416 (466)
T PRK07030 348 NRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---------- 416 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec----------
Confidence 556666777777552 2222221 11 123334442211 01 134666777899998421
Q ss_pred CCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 437 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 437 ~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
...+|+..| ++ ++++|++++.+.++++++..
T Consensus 417 g~~i~~~Pp-l~---it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 GSVVYFLPP-YV---ITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCEEEEECC-cc---CCHHHHHHHHHHHHHHHHHH
Confidence 246898544 44 67999999999999999764
No 370
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.92 E-value=1.9e-06 Score=92.38 Aligned_cols=213 Identities=15% Similarity=0.105 Sum_probs=114.6
Q ss_pred HHHHHHHhhh--cCCcEEEEcC--CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhcccccccc-cC-CCCC-cccE
Q 010008 231 YDMLEKTAIL--FRPKLIIAGA--SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDV 298 (520)
Q Consensus 231 ~d~le~~i~~--~~pklIi~~~--s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~~-~p~~-~aDi 298 (520)
++.+++.+.. .+.-+||+.. -..++ .--+++++++|+++|+++|.|+.+. |+--.|. .. .-+. ..|+
T Consensus 223 ~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 223 ADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCCE
Confidence 5667777653 2455666654 12222 2238899999999999999999854 3321121 00 0011 3699
Q ss_pred EEeccCcccCCC--CceEEEeeCCCcchhhHHHhhccc-----CC-CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHH
Q 010008 299 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 370 (520)
Q Consensus 299 v~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~-----~~-p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i 370 (520)
++++ |.|.|. ..|.+++++ ++.+.+... .. ..+.++.... .++....|+.+.++++ .++.
T Consensus 302 v~~g--Kgl~gG~~Plaav~~~~------ei~~~~~~~~~~~~~~h~~T~~gnpl~-~Aaa~a~L~~i~~~~l---~~~~ 369 (472)
T PRK08742 302 LCLS--KGLTGGFLPLSAVLATQ------QLYDAFLDDSRERAFLHSHSYTGNPLA-CAAALATLDIFADDDV---IARN 369 (472)
T ss_pred EEEc--ccccCCCCCcceeeccH------HHHHHhhccCccCccCcCCCCCccHHH-HHHHHHHHHHHHHCCH---HHHH
Confidence 9886 999543 456777776 555544321 11 1223333333 3333335666655443 3333
Q ss_pred HHHHHHHHHHHHH-CCCEEecC--CCCCeeEEEEecCCCC-----C-----HHHHHHHHhhcCeEEcCCCCCCCCCCCCC
Q 010008 371 VSNCRALASRLVE-LGYKLVSG--GSDNHLVLVDLRPMGI-----D-----GARVEKILDMASITLNKNSVPGDKSALVP 437 (520)
Q Consensus 371 ~~na~~l~~~L~~-~G~~v~~~--gt~~~~~~vd~~~~g~-----~-----~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~ 437 (520)
.+..++|.+.++. ..+.++.. |. ..+.-+.+....- + ...+.+.+.+.||.+... .
T Consensus 370 ~~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------g 438 (472)
T PRK08742 370 QPTAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL----------G 438 (472)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec----------C
Confidence 3334444433322 11222221 11 1233334421100 1 134556677899998421 2
Q ss_pred CEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 438 GGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 438 ~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+.||+..| ++ ++++|++++.+.++++++..
T Consensus 439 ~vi~~~Pp-L~---it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 439 DVLYWMPP-YC---VDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred CEEEEECC-CC---CCHHHHHHHHHHHHHHHHHH
Confidence 47999644 55 57999999999999998753
No 371
>PRK06917 hypothetical protein; Provisional
Probab=98.92 E-value=2e-06 Score=91.90 Aligned_cols=330 Identities=15% Similarity=0.127 Sum_probs=170.4
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
.-.|.|.+|+...+... ...++. .| . ++ ... ...+++.+++.-..+ + ....+|||+|+.+++....
T Consensus 47 h~hp~v~~Ai~~ql~~~-~~~~~~-~~-~-~~---~~~-~lae~L~~~~p~~~~-~--v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 47 HGVKEIADAIKEQAEEV-SFVYRS-QF-T-SE---PAE-KLAKKLSDLSPGDLN-W--SFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCCHHHHHHHHHHHhhC-cCcccc-cc-C-CH---HHH-HHHHHHHHhCCCCCC-E--EEEeCChHHHHHHHHHHHHHHH
Confidence 45788888888777642 111111 11 1 12 112 233567777643222 2 2446899999998887441
Q ss_pred ----CCC-CEEEEcCCCCCccccccccccccccccccc------------eEEEEEcccCC-----CC-C---CCCHHHH
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-----ST-G---LVDYDML 234 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~------------~~~~v~~~~d~-----~~-~---~iD~d~l 234 (520)
.+| .+|+...-.|.|.- .+ .+...+. .+..++++... ++ . .-|.+.+
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t-~~------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGIT-MG------ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCcc-HH------HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 133 67888775543321 01 0111110 00111111100 00 0 0134567
Q ss_pred HHHhhhc---CCcEEEEcCC-C-CCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEe
Q 010008 235 EKTAILF---RPKLIIAGAS-A-YPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 301 (520)
Q Consensus 235 e~~i~~~---~pklIi~~~s-~-~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~ 301 (520)
++.+..+ +.-+||+..- . .++ ..-+++++++|+++|+++|+|+.+. |+--.+.. . .-+. ..|++++
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~ 267 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL 267 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence 7777643 3556776632 1 121 2237899999999999999999974 54212210 0 0011 3688776
Q ss_pred ccCcccCCC--CceEEEeeCCCcchhhHHHhhccc---CCC-CCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 302 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA---VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 302 S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~---~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
+ |.+.|. ..|.+++++ ++.+.+... .+. ++.++.... +++....|+.+.+++ ..+++.+..+
T Consensus 268 g--K~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~~gnpl~-~aaa~a~l~~l~~~~---l~~~~~~~g~ 335 (447)
T PRK06917 268 G--KGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTLSANPLS-AATALAVLEYMEKHN---LPEKAAEKGE 335 (447)
T ss_pred e--ehhccCCcceEEEEEcH------HHHHHHhccCcccccccCCCCCHHH-HHHHHHHHHHHHHCC---HHHHHHHHHH
Confidence 5 999653 467777777 566555321 122 233333333 333333566654433 4556666677
Q ss_pred HHHHHHHHC--CCEEec--CCCCCeeEEEEecCC-----CC--C---HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEE
Q 010008 376 ALASRLVEL--GYKLVS--GGSDNHLVLVDLRPM-----GI--D---GARVEKILDMASITLNKNSVPGDKSALVPGGIR 441 (520)
Q Consensus 376 ~l~~~L~~~--G~~v~~--~gt~~~~~~vd~~~~-----g~--~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giR 441 (520)
.|.+.|++. .+.++. .|. ..+..+.+... .. + ...+.+.|.+.||.+.... ..........+|
T Consensus 336 ~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~--~~~~g~~~~~i~ 412 (447)
T PRK06917 336 YLIKGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAV--AGQDGKEGDAVI 412 (447)
T ss_pred HHHHHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecc--cccCCCCCCEEE
Confidence 777777652 233222 121 12333444211 00 1 2346667788999984310 000001135789
Q ss_pred EccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 442 IGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 442 ig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
+..| ++ ++++|++++++.+++++...
T Consensus 413 l~Pp-l~---it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 413 IAPP-MT---ITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred EECC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence 9755 33 56999999999999999754
No 372
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.90 E-value=7e-07 Score=95.27 Aligned_cols=209 Identities=14% Similarity=0.152 Sum_probs=113.1
Q ss_pred CHHHHHHHhhhc--CCcEEEEcC--CCCCCCCC----HHHHHHHHHHhCCEEEEechhhccccccccc-C---CCCC-cc
Q 010008 230 DYDMLEKTAILF--RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A---DPFK-YC 296 (520)
Q Consensus 230 D~d~le~~i~~~--~pklIi~~~--s~~p~~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~---~p~~-~a 296 (520)
+++.+++++..+ +..+||+.. .+.+...+ +++++++|+++|+++|+|++| .|+-..|.. . ..+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 356677777543 345666652 22222334 899999999999999999997 554222210 0 1111 26
Q ss_pred cEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Q 010008 297 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 376 (520)
Q Consensus 297 Div~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~ 376 (520)
|+++++ |.+.| +|+++.++ .+. ........++.++ +....++..++|+.+.+++ ..+++.+..++
T Consensus 316 Di~t~g--K~lg~--gG~~~~~~------~~~-~~~~~~~~~T~~g-np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~ 380 (464)
T TIGR00699 316 DMVTFS--KKFQT--AGYFFHDP------AFR-PNKPYRQFNTWMG-DPSRALILREIIQEIKRKD---LLENVAHVGDY 380 (464)
T ss_pred CEEEeh--hhhcc--CCccccch------hcc-CCCCcccccCCCC-CHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 887765 98842 24444332 221 1011111122233 2323333333567665443 34455555667
Q ss_pred HHHHHHHC--CCE-EecC--CC-CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCcccc
Q 010008 377 LASRLVEL--GYK-LVSG--GS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTR 450 (520)
Q Consensus 377 l~~~L~~~--G~~-v~~~--gt-~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~ 450 (520)
|.+.|++. .+. ++.. +. ...++-+.+.... ....+.+.|.+.||.+... +...|||..| ++
T Consensus 381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~~---------g~~~ir~~Pp-l~-- 447 (464)
T TIGR00699 381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGGC---------GVKAIRLRPM-LV-- 447 (464)
T ss_pred HHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEecC---------CCCeEEEeCC-CC--
Confidence 77777652 233 2221 11 2233334543111 1345667777889998531 2357999755 33
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 010008 451 GFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 451 g~~~~d~~~la~~i~~~l 468 (520)
++++|++++.++|.+++
T Consensus 448 -it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 448 -FQKHHADIFLEIISKII 464 (464)
T ss_pred -CCHHHHHHHHHHHHHhC
Confidence 57999999999998753
No 373
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.90 E-value=2.9e-08 Score=97.77 Aligned_cols=353 Identities=18% Similarity=0.191 Sum_probs=205.6
Q ss_pred hhccccChHHHHHHHHHHHHhh--ccceEecC----C---CCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHH
Q 010008 72 YSLGEADPEVCEIITKEKERQF--KSLELIAS----E---NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET 142 (520)
Q Consensus 72 ~~l~~~d~~~~~~~~~e~~~~~--~~i~Lias----e---n~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~ 142 (520)
..+...+|+..==+.++.++.. ..|||.++ + .++-+.|++|-.........--| ..-..+.++..
T Consensus 29 s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEY------lpI~Gl~eF~k 102 (427)
T KOG1411|consen 29 SHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEY------LPITGLAEFNK 102 (427)
T ss_pred hcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchh------ccccchHHHHH
Confidence 4455556653222333344443 44777753 2 35778999987655541111111 11112345554
Q ss_pred HHHHHHHHHcCCCCC----CCceeeecCChHHHH--HHHHHhhCCCCCEEEEcCCCCCccccccccccccccccccceEE
Q 010008 143 LCQKRALAAFNLDEN----KWGVNVQPLSGSPAN--FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 216 (520)
Q Consensus 143 ~a~~~~~~lfg~~~~----~~~~~V~~~sGs~A~--~~~l~all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~ 216 (520)
++.+ =+||.+.+ .-.+.||..||+.|+ .+-+.+..-|+..|.+++|+.|.|.. ....+|...+
T Consensus 103 ~sak---La~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~ 171 (427)
T KOG1411|consen 103 LSAK---LALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVK 171 (427)
T ss_pred HHHH---HhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCccee
Confidence 4332 35676532 112578999998554 34566666789999999999988732 2234555445
Q ss_pred EEEcccCCCCCCCCHHHHHHHhhhcCCcEE-EEc-CCCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc
Q 010008 217 SMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 289 (520)
Q Consensus 217 ~v~~~~d~~~~~iD~d~le~~i~~~~pklI-i~~-~s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~ 289 (520)
...| .++++..+|++.+.+.+.+.-..-+ ++- .-+||+ ...+++|+++.++.+.+-+.|+| |-|+-.+++.
T Consensus 172 ~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~d 249 (427)
T KOG1411|consen 172 FYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDLD 249 (427)
T ss_pred eeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCch
Confidence 5554 3567889999998777766333333 332 344565 33589999999999999999998 6665544432
Q ss_pred CCC--C-----Cccc-EEEeccCccc--CCCCceEE--EeeCCCcchhhHHHhh----cccCCCCCCCCChHH--HHHHH
Q 010008 290 ADP--F-----KYCD-VVTTTTHKSL--RGPRGGMI--FFKKDPVLGVELESAI----NNAVFPGLQGGPHNH--TIGGL 351 (520)
Q Consensus 290 ~~p--~-----~~aD-iv~~S~hK~l--~GprgG~I--~~~~~~~~~~~l~~~i----~~~~~p~~~g~p~~~--~iaal 351 (520)
... + .+-+ +++-|+-|.| .|-|.|.+ +|++. +...++ ...+.| ++.+|..| .|++-
T Consensus 250 ~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a-----d~A~rV~SQlk~liRp-mYSnPP~hGArIv~~ 323 (427)
T KOG1411|consen 250 KDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA-----DEAKRVESQLKILIRP-MYSNPPLHGARIVAT 323 (427)
T ss_pred hhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH-----HHHHHHHHHHHHHhcc-cccCCCccchhhhhh
Confidence 211 1 1334 5667999986 67777654 55553 333333 233333 34445444 34332
Q ss_pred HHH---HHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCC
Q 010008 352 AVC---LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSV 428 (520)
Q Consensus 352 a~a---l~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~ 428 (520)
... |+.--..+.+.+..++...++.|.+.|...|-...-..--..+-.+.+ .|++.++++.+-.+..|...+.
T Consensus 324 Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~d-- 399 (427)
T KOG1411|consen 324 ILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCF--TGLNPEQVDWLTKEYHIYLTKD-- 399 (427)
T ss_pred ccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeee--cCCCHHHHHHHHhhheeeeccC--
Confidence 211 211101234667788888888899998876543200000011222323 4778899999889999988432
Q ss_pred CCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 429 PGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 429 Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
=|||...++ ...+.++|++|+.+.+
T Consensus 400 -----------GRiS~aG~s-----s~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 400 -----------GRISMAGLS-----SSNVPYLADAIHAVTK 424 (427)
T ss_pred -----------ceEeecccc-----ccCCcccchhhHhHhc
Confidence 278776555 4788999999987754
No 374
>PRK07036 hypothetical protein; Provisional
Probab=98.88 E-value=2.3e-06 Score=91.85 Aligned_cols=212 Identities=17% Similarity=0.151 Sum_probs=118.0
Q ss_pred HHHHHHhhh---cCCcEEEEcCC-CCCC-CCC----HHHHHHHHHHhCCEEEEechhhcccccccc-c--CCCCC-cccE
Q 010008 232 DMLEKTAIL---FRPKLIIAGAS-AYPR-DFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-V--ADPFK-YCDV 298 (520)
Q Consensus 232 d~le~~i~~---~~pklIi~~~s-~~p~-~~d----~~~i~~ia~~~g~~li~D~Ah~~gli~~~~-~--~~p~~-~aDi 298 (520)
+.+++.+.. .+..+||+... ...+ ..+ +++++++|++||+++|+|+.+. |+--.|. . ..-+. ..|+
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~~gv~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVT-GFGRLGHFFASEAVFGIQPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCcCchhhhhhhhcCCCCCE
Confidence 345555532 23556777532 2222 233 8999999999999999999863 3311110 0 00111 3688
Q ss_pred EEeccCcccCCC--CceEEEeeCCCcchhhHHHhhccc------CCC-CCCCCChHHHHHHHHHHHHHhcCchhHHHHHH
Q 010008 299 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 369 (520)
Q Consensus 299 v~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~~------~~p-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 369 (520)
++++ |.++|. ..|.+++++ ++.+.+... ... ++.++.... +++....|+.+.+++ ..++
T Consensus 286 vt~g--K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~gnpl~-~aaa~a~Le~i~~~~---l~~~ 353 (466)
T PRK07036 286 ITFA--KGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYSGHPVA-CAAALKNIEIMEREG---LCEH 353 (466)
T ss_pred EEEc--cccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCCCCHHH-HHHHHHHHHHHHhCC---HHHH
Confidence 8775 999653 457777777 566555321 111 133443333 333333566665433 4556
Q ss_pred HHHHHHHHHHHHHHC-CCEEec--CCCCCeeEEEEecCCC-------CC---HHHHHHHHhhcCeEEcCCCCCCCCCCCC
Q 010008 370 VVSNCRALASRLVEL-GYKLVS--GGSDNHLVLVDLRPMG-------ID---GARVEKILDMASITLNKNSVPGDKSALV 436 (520)
Q Consensus 370 i~~na~~l~~~L~~~-G~~v~~--~gt~~~~~~vd~~~~g-------~~---~~~~~~~L~~~gI~v~~~~~Pg~~~~~~ 436 (520)
+.+..++|.+.|++. ...++. .|. ..+..+.+.... .+ ...+.+.|.+.||.+.. .
T Consensus 354 ~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----~------ 422 (466)
T PRK07036 354 VREVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP----L------ 422 (466)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee----c------
Confidence 666677777777552 222222 111 123334442111 11 23466677889999842 1
Q ss_pred CCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 437 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 437 ~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+.+|+..| ++ ++++|++++.+.+++++...
T Consensus 423 ~~~~~l~Pp-l~---it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 423 EHLCVLSPP-LI---ITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred CCEEEEeCC-Cc---CCHHHHHHHHHHHHHHHHHH
Confidence 135788644 43 56899999999999998754
No 375
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=1.5e-06 Score=85.46 Aligned_cols=318 Identities=17% Similarity=0.182 Sum_probs=163.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh-----
Q 010008 105 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----- 179 (520)
Q Consensus 105 ~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al----- 179 (520)
-.|.+++|+.+....-+ ..++-||. ....+++ +++.++||-+. .+...+|.+|+..++.-.
T Consensus 76 chpki~~aLqeq~~kLt---lssrafYn--d~~~~f~----~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLT---LSSRAFYN--DVLGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhh---hhhHHHhh--hhHHHHH----HHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 57889999888776333 22223442 2233444 78899999885 234567889888766422
Q ss_pred -CC--CCCEEEEcCCCCCccccccccccccccccccceEEEEEc-ccCCC-C---CCCCHHHHHHHhhhcCCcEEEEcCC
Q 010008 180 -LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDES-T---GLVDYDMLEKTAILFRPKLIIAGAS 251 (520)
Q Consensus 180 -l~--pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~-~~d~~-~---~~iD~d~le~~i~~~~pklIi~~~s 251 (520)
.+ |.|+-.++... +.+ ||..+ ..+++++..-....| |.-|. . -.-|.++|+.+++..+...+++..-
T Consensus 142 ~~K~ip~nka~il~~~--~nF-hGrT~--~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPI 216 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAE--NNF-HGRTL--GAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPI 216 (427)
T ss_pred hhccCCccceeEEEec--ccc-cCcee--eeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCCCeeEEEeecc
Confidence 22 55554443321 011 22111 122222211000000 00000 0 1236788888887644555555421
Q ss_pred C------CCCCCCHHHHHHHHHHhCCEEEEechhhccccccccc-CCCCC--cccEEEeccCcccCCCC--ceEEEeeCC
Q 010008 252 A------YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRGPR--GGMIFFKKD 320 (520)
Q Consensus 252 ~------~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~~p~~--~aDiv~~S~hK~l~Gpr--gG~I~~~~~ 320 (520)
. .|..--+++.+++|.+|++++|.|+.|. |+--.|.. ....+ -.|++... |.|.|.- ...+++.+
T Consensus 217 QGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~- 292 (427)
T KOG1402|consen 217 QGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADD- 292 (427)
T ss_pred ccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecH-
Confidence 1 1112238999999999999999999874 54322211 00001 35888877 8886522 24455555
Q ss_pred CcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHCCCEE---ec--CCCCC
Q 010008 321 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL---VS--GGSDN 395 (520)
Q Consensus 321 ~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~G~~v---~~--~gt~~ 395 (520)
++...++...-..+.|+.....-.|+| +|+.+.+ +...++....-..|..+|.+..-++ +. .| ..
T Consensus 293 -----~im~~~~pgeHgsTyggNpLg~~vaiA-alevi~e---ekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRG-rG 362 (427)
T KOG1402|consen 293 -----DIMLNIKPGEHGSTYGGNPLGCAVAIA-ALEVIVE---EKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRG-RG 362 (427)
T ss_pred -----HHHhccCCCccccccCCChHHHHHHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHhccccccchhheeec-cc
Confidence 555556554433334443332222332 5655543 2233444444455666666532221 11 12 12
Q ss_pred eeEEEEecCC---CCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 396 HLVLVDLRPM---GIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 396 ~~~~vd~~~~---g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.+..+.+.+. +.+...+.-.|.+.|+... |- -..-||+..| ++ ++|+|+++-.++|.+.+
T Consensus 363 l~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAk----pt-----H~~IiRfaPP-L~---I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 363 LLNAIVINPSKTSGQDAWDVCLALKENGLLAK----PT-----HGNIIRFAPP-LV---ISEEDLREGIEAIEKTI 425 (427)
T ss_pred eEEEEEeccccccchhHHHHHHcccccccccC----CC-----CCCeEEecCC-cc---cCHHHHHHHHHHHHHHh
Confidence 2333333322 2344445566677887762 21 1346999755 44 67999999999998765
No 376
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.84 E-value=1.8e-06 Score=91.92 Aligned_cols=209 Identities=19% Similarity=0.162 Sum_probs=110.9
Q ss_pred HHHHHHHhhh--cCCcEEEEcC-CCCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEE
Q 010008 231 YDMLEKTAIL--FRPKLIIAGA-SAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVV 299 (520)
Q Consensus 231 ~d~le~~i~~--~~pklIi~~~-s~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv 299 (520)
++++++.+.. .++.+||+.. ....+ .-.+++|+++|++||+++|+|++|. |+-..|.. . .-+. ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4455556643 2456777752 12222 2358899999999999999999976 43222210 0 0111 36888
Q ss_pred EeccCcccCCCCceEEEeeCCCcchhhHHH-hhc-ccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 010008 300 TTTTHKSLRGPRGGMIFFKKDPVLGVELES-AIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 377 (520)
Q Consensus 300 ~~S~hK~l~GprgG~I~~~~~~~~~~~l~~-~i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l 377 (520)
+++ |.+ |-+|++..++ . .++.. ... .....++.++.... +++..++|+.+.++++ .+++.+..+.|
T Consensus 284 ~~g--K~~--~~~g~~~~~~-i---~~~~~~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~~l---~~~~~~~g~~l 351 (431)
T TIGR03251 284 AFG--KKT--QVCGIMAGRR-V---DEVADNVFAVPSRLNSTWGGNLVD-MVRATRILEIIEEERL---VDNARVQGAHL 351 (431)
T ss_pred Eec--ccC--ccceEEecch-H---HHhhhhcccCccccCCCCCCCHHH-HHHHHHHHHHHHhcCH---HHHHHHHHHHH
Confidence 764 876 5567775543 0 01111 111 11111223333333 3333345776654443 34455555666
Q ss_pred HHHHHHC--CCE-EecCCC-CCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCC
Q 010008 378 ASRLVEL--GYK-LVSGGS-DNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFS 453 (520)
Q Consensus 378 ~~~L~~~--G~~-v~~~gt-~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~ 453 (520)
.+.|++. .+. ++..-. ...+..+.+.... ....+.+.|.+.||.+. |. ....+|+..+.. .+
T Consensus 352 ~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~-----g~~~lr~~P~l~----~t 417 (431)
T TIGR03251 352 LARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLL----GC-----GERSIRFRPPLT----VT 417 (431)
T ss_pred HHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEe----cC-----CCCeEEEECCcc----CC
Confidence 6666441 122 222111 1233344553211 13457777889999983 21 235699976643 56
Q ss_pred HHHHHHHHHHHHH
Q 010008 454 EKEFVAIADFIHE 466 (520)
Q Consensus 454 ~~d~~~la~~i~~ 466 (520)
++|++++.+.+++
T Consensus 418 ~~eid~~l~~l~~ 430 (431)
T TIGR03251 418 REEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHHHHHh
Confidence 8999999998875
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.82 E-value=1.1e-07 Score=96.92 Aligned_cols=314 Identities=16% Similarity=0.161 Sum_probs=163.8
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC--CCCCEEEEcCCCCCcccccccccccccccc
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 210 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~ 210 (520)
|+..+-.+-......+.+..|+....- +.|.|..-.-.+.+++.++- ..++.|+.+..+|-.. .+.+..
T Consensus 50 Gss~~~~ltn~l~~d~~~~~G~~~~~~-~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc--------~kai~~ 120 (389)
T PF05889_consen 50 GSSLLAKLTNSLVLDALRLAGLRSVKS-CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC--------FKAIER 120 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHTTHCE-EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH--------HHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCccccc-eEEEecccccHHHHHHHHHhcccCCceEEEeeccccch--------HHHHHh
Confidence 444444444333344556788874221 23433332235555666663 4568888877654321 135566
Q ss_pred ccceEEEEEcccCCCCCCCCHHHHHHHhhhcCC--cEEEEcCC--CCCCCCC-HHHHHHHHHHhCCEEEEechhhccccc
Q 010008 211 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGAS--AYPRDFD-YPRMRQIADAVGALLMMDMAHISGLVA 285 (520)
Q Consensus 211 ~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~p--klIi~~~s--~~p~~~d-~~~i~~ia~~~g~~li~D~Ah~~gli~ 285 (520)
+|....+++--..++.-..|.+.+++.+++..+ .+.+++++ .+|+..| +++|++||+++|++.++..|+..-...
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~ 200 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSK 200 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HH
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHH
Confidence 675444444323333345678889999876543 45566533 4677666 999999999999999999985430000
Q ss_pred c-cccCCC--CCcccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCCC-CCCChHHHHHHHHHHHHHhcCc
Q 010008 286 A-SVVADP--FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSP 361 (520)
Q Consensus 286 ~-~~~~~p--~~~aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~-~g~p~~~~iaala~al~~~~~~ 361 (520)
. ...... ..-.|+++-|+-|.|.-|-||.+++..+. .....+.+. +|+- ..+|....+- -|..+...
T Consensus 201 ~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~----~~i~~vs~~-YpGRas~sp~ld~~i----tLl~LG~~ 271 (389)
T PF05889_consen 201 CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDP----SGILAVSKE-YPGRASASPSLDLFI----TLLSLGCT 271 (389)
T ss_dssp HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSH----HHHHHHHHT-SHSHBTSHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCH----HHHHHHHHH-hhhhhhcccchHHHH----HHHHHhhh
Confidence 0 000000 01368999999999988888766665531 455555543 4443 2333333221 12222223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH----CCCEEecCCCCCeeEE-EEecCCCC----CHHHHHHHHhhcCeEEcCCCCCCCC
Q 010008 362 EFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVL-VDLRPMGI----DGARVEKILDMASITLNKNSVPGDK 432 (520)
Q Consensus 362 ~~~~~~~~i~~na~~l~~~L~~----~G~~v~~~gt~~~~~~-vd~~~~g~----~~~~~~~~L~~~gI~v~~~~~Pg~~ 432 (520)
+|.....+..+.-.++.++|++ .|-.+.. ...||..+ +++....- +..++...|...||.-.+...|++.
T Consensus 272 g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~-~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~ 350 (389)
T PF05889_consen 272 GYGALLKERKASFPYLKERLKKWAEEVGERLLE-TPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGK 350 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSS-STT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCC
Confidence 4555556666666666666654 4534332 12466543 34432211 2356788888888763321122221
Q ss_pred ------CCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 433 ------SALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 433 ------~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
+.+...++-+. .+.|++++|++.+++.++++++
T Consensus 351 ~~tsh~~~yp~~Ylt~A----saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 351 KQTSHSSNYPCPYLTAA----SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEETTSS--SSSEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred cccccCCCCchHHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence 11122455552 2368999999999999999874
No 378
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.81 E-value=3.9e-07 Score=92.23 Aligned_cols=238 Identities=18% Similarity=0.155 Sum_probs=143.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhh---CCCC----------CEEEEcCCCCCccccccccc
Q 010008 137 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKPH----------DRIMGLDLPHGGHLSHGFMT 203 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~al---l~pG----------D~Vl~~~~~~~ghls~g~~~ 203 (520)
.-.+|..+.....++.|.+...+ .+....|+-+|+.++.+- .-|+ +-|+..+ ..+|+|--
T Consensus 139 F~lmE~~vl~km~~ivGw~~~~D--gIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~--- 211 (510)
T KOG0629|consen 139 FVLMEEEVLAKMREIVGWEEGGD--GIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK--- 211 (510)
T ss_pred EEeehHHHHHHHHHHhCCCCCCC--ceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH---
Confidence 33456666677778888876422 455567776776555442 1122 3344333 23343321
Q ss_pred cccccccccce-EEEEEcccCCCCCCCCHHHHHHHhhhcCCc-----EEEEc--CCCCCCCCCHHHHHHHHHHhCCEEEE
Q 010008 204 PKRRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAILFRPK-----LIIAG--ASAYPRDFDYPRMRQIADAVGALLMM 275 (520)
Q Consensus 204 ~~~~v~~~g~~-~~~v~~~~d~~~~~iD~d~le~~i~~~~pk-----lIi~~--~s~~p~~~d~~~i~~ia~~~g~~li~ 275 (520)
+...+.|.+ ...+.++.| +.|.+++++||+.|.+.+-| ++-++ .+.++-..|++.|+++|++|+.|+++
T Consensus 212 --kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHv 288 (510)
T KOG0629|consen 212 --KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHV 288 (510)
T ss_pred --HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEe
Confidence 233444432 234455565 57999999999988764433 33332 22334477999999999999999999
Q ss_pred echhhcccccccccCCC---CCcccEEEeccCcccCCCCc-eEEEeeCCCcchhhHHHhhc---------ccC-------
Q 010008 276 DMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN---------NAV------- 335 (520)
Q Consensus 276 D~Ah~~gli~~~~~~~p---~~~aDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~l~~~i~---------~~~------- 335 (520)
|+|+.-|+.-...+..- ++-+|-|+.+.||++..|-- +.++++.+ .+..+-+ +-.
T Consensus 289 DAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~-----gll~~Cn~~~A~YLFq~dK~YdvS~D 363 (510)
T KOG0629|consen 289 DAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE-----GLLQRCNQMSAIYLFQQDKFYDVSYD 363 (510)
T ss_pred ecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH-----HHHHhhcccchhhhhccCceeecccc
Confidence 99987766644333222 23589999999999866543 66666653 2211111 000
Q ss_pred --CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHC-CCEEec
Q 010008 336 --FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 390 (520)
Q Consensus 336 --~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~~-G~~v~~ 390 (520)
.-..|.|.|.... -++.-++--...+|++.+++..+++++|.+.|++. |+..+-
T Consensus 364 TgdK~iQCGRh~D~F-KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~ 420 (510)
T KOG0629|consen 364 TGDKAIQCGRHVDVF-KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLF 420 (510)
T ss_pred cccchhhcCccccHH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehh
Confidence 0123555454332 23434443345678999999999999999999985 555554
No 379
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.75 E-value=5.6e-06 Score=93.54 Aligned_cols=207 Identities=15% Similarity=0.083 Sum_probs=128.7
Q ss_pred HHHHHhhhcCCcEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCc-----
Q 010008 233 MLEKTAILFRPKLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK----- 305 (520)
Q Consensus 233 ~le~~i~~~~pklIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK----- 305 (520)
++++.+.. ++-.+++.+|++-+ ..|+++|.+++|+.|+++++ .+ ..++..+...|-+ |+||++++.+-
T Consensus 200 ~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~---d~laL~ll~~Pge~GADI~vG~~Q~fGvp~ 274 (954)
T PRK12566 200 AVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AA---DLLSLLVLTPPGELGADVVLGSTQRFGVPM 274 (954)
T ss_pred chhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-Ee---CHHHHhCCCChhhcCCcEEeeCCCcCCCCC
Confidence 33444433 56678888888665 66999999999999998664 33 3344444555655 89999886553
Q ss_pred ccCCCCceEEEeeCCC-----c-----------------chhhHHHhhcccCCCCCCCCChHHHHHHHHHHH--HHhcCc
Q 010008 306 SLRGPRGGMIFFKKDP-----V-----------------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCL--KHAQSP 361 (520)
Q Consensus 306 ~l~GprgG~I~~~~~~-----~-----------------~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al--~~~~~~ 361 (520)
.++||..|++.+++.. + .+..-++.|++-.-....+ .+..+.|+.+++ -.+...
T Consensus 275 ~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC--T~qaL~A~~a~~Y~~~~Gp~ 352 (954)
T PRK12566 275 GYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC--TAQVLLANIAGFYAVYHGPE 352 (954)
T ss_pred CCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh--HHHHHHHHHHHHHHHHhChH
Confidence 4578888999998731 0 0011111222211111111 122333443332 223344
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHCCCEEecCCCCCee--EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCE
Q 010008 362 EFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL--VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGG 439 (520)
Q Consensus 362 ~~~~~~~~i~~na~~l~~~L~~~G~~v~~~gt~~~~--~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~g 439 (520)
++++..+++..++.+|++.|.+.|+++... .++ +.+++ +.+..++.+...+.||-++.. ..+.
T Consensus 353 Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~---------~~~~ 417 (954)
T PRK12566 353 GLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV---GGAQAAIIESAEAARINLRIL---------GRGR 417 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc---cCCHHHHHHHHHHCCCeeEEe---------CCCe
Confidence 578889999999999999999999998653 222 23333 213556666666788887642 1345
Q ss_pred EEEccCCccccCCCHHHHHHHHHHHH
Q 010008 440 IRIGSPAMTTRGFSEKEFVAIADFIH 465 (520)
Q Consensus 440 iRig~~~~tt~g~~~~d~~~la~~i~ 465 (520)
+.|++...|+ ++|++.+.+.+.
T Consensus 418 ~~~s~de~~~----~~~~~~~~~~f~ 439 (954)
T PRK12566 418 LGVSLDETCD----EATVARLFDIFL 439 (954)
T ss_pred EEEEeCCCCC----HHHHHHHHHHhc
Confidence 7788776655 899999999884
No 380
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.74 E-value=3.1e-06 Score=86.77 Aligned_cols=314 Identities=15% Similarity=0.082 Sum_probs=175.7
Q ss_pred cchhHHHHHHHHHHHHHHHcCCCCCC------CceeeecCChHHHHHHHHHhh-------CCCC-----------CEEEE
Q 010008 133 GNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIMG 188 (520)
Q Consensus 133 g~~~~d~lE~~a~~~~~~lfg~~~~~------~~~~V~~~sGs~A~~~~l~al-------l~pG-----------D~Vl~ 188 (520)
.++...+||...-+|+.++.+++... -+.-|.-.|.|++++.++.+- ++.+ +-|+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 46778899999999999999986321 111233456777777666553 2222 22332
Q ss_pred cCCCCCccccccccccccccccccceEEEEEcccCCCCCCCCHHHHHHHhhhcC-----CcEEEEcC-CCCCC-CCCHHH
Q 010008 189 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGA-SAYPR-DFDYPR 261 (520)
Q Consensus 189 ~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~-----pklIi~~~-s~~p~-~~d~~~ 261 (520)
.+ ..+| ... .++....+. +...++.| +++.++.+.|+++|++.. |-.++++. +.++. ..++.+
T Consensus 187 ~S--Dqah---ssv--eka~~i~~V--klR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~e 256 (511)
T KOG0628|consen 187 CS--DQAH---SSV--EKACLIAGV--KLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEE 256 (511)
T ss_pred ec--Cccc---chH--HHhHhhcce--eEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHH
Confidence 22 1122 111 122223333 44445555 378999999999998643 44455542 33333 667999
Q ss_pred HHHHHHHhCCEEEEechhhcccccc-ccc---CCCCCcccEEEeccCcccCCC-CceEEEeeCCC------cchhhHH--
Q 010008 262 MRQIADAVGALLMMDMAHISGLVAA-SVV---ADPFKYCDVVTTTTHKSLRGP-RGGMIFFKKDP------VLGVELE-- 328 (520)
Q Consensus 262 i~~ia~~~g~~li~D~Ah~~gli~~-~~~---~~p~~~aDiv~~S~hK~l~Gp-rgG~I~~~~~~------~~~~~l~-- 328 (520)
|..+|+++|+||++|+| |+|-.+. ... -..++++|-+.+..|||+.-- -...++.+++- ..-..+.
T Consensus 257 lg~Vc~~~glWLHVDAA-YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 257 LGPVCREEGLWLHVDAA-YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred hcchhhhcCEEEEeehh-hccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcc
Confidence 99999999999999988 6664322 111 133457999999999997321 11223333320 0000111
Q ss_pred HhhcccC-CCCCCCCChHHHHHHHH--HHHHHhcCchhHHHHHHHHHHHHHHHHHHHH-CCCEEecCCCCCeeEEEEecC
Q 010008 329 SAINNAV-FPGLQGGPHNHTIGGLA--VCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLRP 404 (520)
Q Consensus 329 ~~i~~~~-~p~~~g~p~~~~iaala--~al~~~~~~~~~~~~~~i~~na~~l~~~L~~-~G~~v~~~gt~~~~~~vd~~~ 404 (520)
+...... +.. .+=|....+-++- .-++....+.+++|.++..+.++.+-+.+.+ .-|+++.+ .++-++.++.
T Consensus 336 ~~~~~~~Dyrh-wqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~---~~lgLvcFRl 411 (511)
T KOG0628|consen 336 AYQGSAPDYRH-WQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNK---RILGLVCFRL 411 (511)
T ss_pred hhhccCCCccc-cccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecc---cccceeEEee
Confidence 1111111 111 2223334444443 3355555556677777777777777666554 46777764 4666777776
Q ss_pred CCCCH--HHHHHHHh-hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 405 MGIDG--ARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 405 ~g~~~--~~~~~~L~-~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
++-+. +.+.+.+. ...|.....++- +.-.||+...+ .-.+++|+++.-+.|.+....
T Consensus 412 k~~N~~ne~Ll~~in~~g~i~l~~~~l~------gk~vlRf~V~s---~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 412 KGDNEINEALLNRLNSSGRIHLVPASLH------GKFVLRFAVCS---PLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred cCCcHHHHHHHHHHHhcCcEEEEEeeec------ceEEEEEEecC---CCCcHHHHHHHHHHHHHHHHH
Confidence 65432 33444443 355666332211 12248976433 224589999988888777654
No 381
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.73 E-value=9.6e-06 Score=86.52 Aligned_cols=211 Identities=18% Similarity=0.172 Sum_probs=114.0
Q ss_pred HHHHHHHhhh--cCCcEEEEcCC-CCCC-----CCCHHHHHHHHHHhCCEEEEechhhccccccccc--CCCCC-cccEE
Q 010008 231 YDMLEKTAIL--FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVV 299 (520)
Q Consensus 231 ~d~le~~i~~--~~pklIi~~~s-~~p~-----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~--~~p~~-~aDiv 299 (520)
++++++.+.. .++.+||+..- ...+ ...+++++++|++||+++|+|+.+. |+--.|.. ..-+. ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4556666653 24567777521 1112 2358899999999999999999964 43212210 00011 36898
Q ss_pred EeccCcccCCCCceEEEeeCCCcchhhHH-Hhhc-ccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHH
Q 010008 300 TTTTHKSLRGPRGGMIFFKKDPVLGVELE-SAIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 377 (520)
Q Consensus 300 ~~S~hK~l~GprgG~I~~~~~~~~~~~l~-~~i~-~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l 377 (520)
++ .|.+ |-+|++..++ . .+.. ..+. .....++.++......+++ .+++.+.+++ ..+++.+..+.+
T Consensus 291 ~~--gK~l--~~~a~l~~~~-i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~-a~L~~l~~~~---l~~~~~~~g~~l 358 (443)
T PRK08297 291 AF--GKKT--QVCGIMAGRR-V---DEVEDNVFAVSSRINSTWGGNLVDMVRAR-RILEVIEEDG---LVENAARQGEYL 358 (443)
T ss_pred Ee--cccc--cccceecchH-H---HHhhhhhccCccccCCCCCccHHHHHHHH-HHHHHHHhcC---HHHHHHHHHHHH
Confidence 76 5987 3456665543 0 0111 1111 1111122333333333333 3566554433 345566666667
Q ss_pred HHHHHHC--CCEEe---cCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 378 ASRLVEL--GYKLV---SGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 378 ~~~L~~~--G~~v~---~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
.+.|++. .+..+ ..|. ..++.+.+.... ....+.+.|.+.||.+. |. ....+|+..+ ++ +
T Consensus 359 ~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~----~~-----~~~~lr~~P~-l~---~ 423 (443)
T PRK08297 359 LARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVL----PC-----GERSIRFRPA-LT---V 423 (443)
T ss_pred HHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEe----cC-----CCCeEEEECC-cc---C
Confidence 7766552 12211 1122 344455553211 13456677778999983 32 1346899644 33 6
Q ss_pred CHHHHHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIHEGVE 469 (520)
Q Consensus 453 ~~~d~~~la~~i~~~l~ 469 (520)
+++|++++.+.+.+++.
T Consensus 424 t~~eid~~l~~l~~~l~ 440 (443)
T PRK08297 424 TTEEIDAAIDALRRALP 440 (443)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 79999999999998875
No 382
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.72 E-value=1.9e-05 Score=82.56 Aligned_cols=211 Identities=21% Similarity=0.216 Sum_probs=120.4
Q ss_pred HHHHHHHhhhcCCc---EEEEcC---CCCCC----CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC------
Q 010008 231 YDMLEKTAILFRPK---LIIAGA---SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------ 294 (520)
Q Consensus 231 ~d~le~~i~~~~pk---lIi~~~---s~~p~----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~------ 294 (520)
.++|++++.++.|. ++|+.. ..-+. .--++++++||++||++||+|+. ..|+--.| ..|.
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG---~~FA~e~~gi 275 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTG---KMFACEHAGI 275 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCc---hhhhhhhcCC
Confidence 57788888876643 444431 11111 22389999999999999999986 44432212 2221
Q ss_pred cccEEEeccCcccCCCC--ceEEEeeCCCcchhhHHHhhccc----CCCCC-CCCChHHHHHHHHHHHHHhcCchhHHHH
Q 010008 295 YCDVVTTTTHKSLRGPR--GGMIFFKKDPVLGVELESAINNA----VFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQ 367 (520)
Q Consensus 295 ~aDiv~~S~hK~l~Gpr--gG~I~~~~~~~~~~~l~~~i~~~----~~p~~-~g~p~~~~iaala~al~~~~~~~~~~~~ 367 (520)
-.|+++.+ |.|+|.- -|.+++++ ++.+.+... .+.|. +.+......+|++ .|+...++ ...
T Consensus 276 ~PDi~~~a--KGLT~GY~Pl~a~l~~~------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla-~L~i~e~e---~l~ 343 (449)
T COG0161 276 VPDILCLA--KGLTGGYLPLSAVLTSD------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALA-NLDILEEE---DLL 343 (449)
T ss_pred CCCeeeec--ccccccchhhHhHhhhH------HHHHHHhcccCCeeccCCccccCHHHHHHHHH-HHHHHHhc---CHH
Confidence 25888877 9986522 25555555 455544332 22222 2232222233333 35555443 346
Q ss_pred HHHHHHHHHHHHHHHH--CCCEEecCCC-CCeeEEEEecCC-C-CC------HHHHHHHHhhcCeEEcCCCCCCCCCCCC
Q 010008 368 NKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLRPM-G-ID------GARVEKILDMASITLNKNSVPGDKSALV 436 (520)
Q Consensus 368 ~~i~~na~~l~~~L~~--~G~~v~~~gt-~~~~~~vd~~~~-g-~~------~~~~~~~L~~~gI~v~~~~~Pg~~~~~~ 436 (520)
+++.+...+|.+.|.+ .+.+.+.+-. ...+..+.+... + .. +..+.+.+.+.|+.++.. |+
T Consensus 344 ~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g~----- 415 (449)
T COG0161 344 ERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---GD----- 415 (449)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---CC-----
Confidence 6677778888888886 3333443211 112233343221 1 11 456778888999999642 22
Q ss_pred CCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHH
Q 010008 437 PGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 437 ~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~ 471 (520)
.+=++.|.+ .+++|++++.+.+.++++..
T Consensus 416 --~i~~~PPli----it~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 416 --VIYLMPPLI----ITREEIDELVDALREALDET 444 (449)
T ss_pred --EEEEcCCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 344444433 45899999999999998864
No 383
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.71 E-value=2.3e-06 Score=86.02 Aligned_cols=182 Identities=19% Similarity=0.254 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEEEeccCccc-CCCCceEEEeeCCCcchhhHHHhhc
Q 010008 258 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAIN 332 (520)
Q Consensus 258 d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~l~~~i~ 332 (520)
-+++..++|+++|.++|.|+++. |+--.| +-..|+ -.||++.+ |.+ .|-..|.+++.+ ++.+-+.
T Consensus 234 Ylka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~------EIa~v~~ 303 (442)
T KOG1404|consen 234 YLKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTP------EIADVLN 303 (442)
T ss_pred HHHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHHHHH--hhccCCCcceeeecCH------HHHHHHH
Confidence 38999999999999999999864 433233 223333 24776554 998 454557777777 6777666
Q ss_pred ccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH--CCCEEecCCCCCeeEE----EEec--
Q 010008 333 NAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVSGGSDNHLVL----VDLR-- 403 (520)
Q Consensus 333 ~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~--~G~~v~~~gt~~~~~~----vd~~-- 403 (520)
+.. +..+.|+..+...++++ .|+-+.+ +..+++...-..+|.+.|.+ .+.+++.+-....+++ ++-+
T Consensus 304 ~~~~~fnTyggnP~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~ 379 (442)
T KOG1404|consen 304 QKSSHFNTYGGNPVACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSE 379 (442)
T ss_pred hccccccccCCCchhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCC
Confidence 554 33334554454544554 3554433 23344444445566666655 3556665322223322 2222
Q ss_pred CCCC---CHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHH
Q 010008 404 PMGI---DGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFI 464 (520)
Q Consensus 404 ~~g~---~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i 464 (520)
++.. -+..+.+.+.+.|+.|+++.+-|+ .+||..| ++ +|.+|++.+++..
T Consensus 380 ~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~-------vfriaPP-lc---iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 380 PKPPATAEGAVIGEQCKELGVLVGKGGIHGN-------VFRIAPP-LC---ITKEDIDFAVEYF 432 (442)
T ss_pred CCCcchHHHHHHHHHHHHhCeeeecccccce-------EEEecCC-ee---ccHHHHHHHHHHH
Confidence 1111 134467888999999987655442 7999755 44 6789997777766
No 384
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.66 E-value=2.5e-06 Score=83.01 Aligned_cols=348 Identities=14% Similarity=0.149 Sum_probs=191.4
Q ss_pred ccceEec-CCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHH
Q 010008 94 KSLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 172 (520)
Q Consensus 94 ~~i~Lia-sen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~ 172 (520)
+.|.|-. |-..+|+.+++.+...|. +|+.--....+.|-.+|+.- .+-+-..++.+.|++..++ .+.+.-.+|
T Consensus 67 ~~iYlcGNSLGLmPK~t~~~~~~eLD-kWak~av~gH~~GkvPW~~~-De~il~l~~~iVGA~e~Ev----avmNsLTvN 140 (465)
T KOG3846|consen 67 PVIYLCGNSLGLMPKSTRNSINAELD-KWAKCAVEGHFKGKVPWVSI-DEPILPLLAPIVGAQENEV----AVMNSLTVN 140 (465)
T ss_pred CeEEEeccccccCchhhHhHHHHHHH-HHHhhhhhcccccccceeec-chhhhhhhhhhccCCchhh----hhHhhhhhH
Confidence 3444432 224678888888877764 33321000011222222211 1234467888999987654 234444555
Q ss_pred HH-HHHhhCCCCC---EEEEcCCCCCccccccccccccccccccceEEEEEcccCCC--CCCCCHHHHHHHhhhcCC--c
Q 010008 173 FE-VYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRP--K 244 (520)
Q Consensus 173 ~~-~l~all~pGD---~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d~~--~~~iD~d~le~~i~~~~p--k 244 (520)
.. ++.++.+|-. +|+. +.++..+..|..+ ..+...|...+-...-+.|. ...+-.++|.+.|....- .
T Consensus 141 lh~Ll~sFyKPTekR~KILl---E~kaFPSDhYAie-sQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA 216 (465)
T KOG3846|consen 141 LHSLLISFYKPTEKRFKILL---EKKAFPSDHYAIE-SQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIA 216 (465)
T ss_pred HHHHHHHhcCCcchhhhhhh---ccCCCCchHHHHH-hhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEE
Confidence 54 5557777754 4553 3333344334222 23444454322222222222 246777888888876333 3
Q ss_pred EEEEcCCCC-CC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCccc-CCCCc-eEEEeeCC
Q 010008 245 LIIAGASAY-PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL-RGPRG-GMIFFKKD 320 (520)
Q Consensus 245 lIi~~~s~~-p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK~l-~Gprg-G~I~~~~~ 320 (520)
+|+++...| .+ .+|+.+|...-+..|+++=.|-||+.|-+...++.. ++|+.+....|.+ +|+.| |-++....
T Consensus 217 ~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 217 LVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred EEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehh
Confidence 444444444 33 789999987667789999999999998776555554 5899999999998 55555 44555432
Q ss_pred C---------cch-hhHHHhh--------cccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHH
Q 010008 321 P---------VLG-VELESAI--------NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 382 (520)
Q Consensus 321 ~---------~~~-~~l~~~i--------~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~ 382 (520)
. +.+ -+..+++ ......+-+++|..+..+|+-.+|+...+...++.+++-.-...+|...++
T Consensus 294 h~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k 373 (465)
T KOG3846|consen 294 HTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLK 373 (465)
T ss_pred hhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHH
Confidence 1 000 1111211 112223346789999999988888765543334444443333333322222
Q ss_pred H-CCC-----------EEecCC-CC--CeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEcc-CC
Q 010008 383 E-LGY-----------KLVSGG-SD--NHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGS-PA 446 (520)
Q Consensus 383 ~-~G~-----------~v~~~g-t~--~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~-~~ 446 (520)
. .|. .++++. ++ .-...+-+.. ....+...|.++|+.+.+. .|.+||+.. |-
T Consensus 374 ~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~krGv~~DkR---------~PNvIRvAPvpL 441 (465)
T KOG3846|consen 374 ASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELHKRGVIGDKR---------RPNVIRVAPVPL 441 (465)
T ss_pred HhcccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHHHcCeecccc---------CCCceEeecchh
Confidence 2 232 333331 11 1111222221 2367888999999998764 467899865 33
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
+++ -.|+....+.+.+++..
T Consensus 442 YN~----f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 442 YNT----FSDVYIFVNALNEAMDK 461 (465)
T ss_pred hcc----HHHHHHHHHHHHHHHHH
Confidence 433 57888888888877764
No 385
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.65 E-value=1.8e-06 Score=84.20 Aligned_cols=277 Identities=18% Similarity=0.217 Sum_probs=157.6
Q ss_pred eeeecCChHHHHHHHHH--hhCCCCCEEEEcCCCCCccccccccccccccccccceEEEEEccc-CCCCCCCCHHHHHHH
Q 010008 161 VNVQPLSGSPANFEVYT--AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKT 237 (520)
Q Consensus 161 ~~V~~~sGs~A~~~~l~--all~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~-d~~~~~iD~d~le~~ 237 (520)
..||..||+.|+.+... +-.-+...|-+.+|+...|-.-. .-.|- ..+-.|+. |.++..+|++.+...
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if--------~~aGf-~tv~~Y~yWd~~~k~~d~e~~Lsd 171 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIF--------EKAGF-TTVATYPYWDAENKCVDLEGFLSD 171 (410)
T ss_pred cceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHH--------HHcCC-ceeeeeeeecCCCceecHHHHHHH
Confidence 46899999988876432 22234567888889887773211 11221 12223333 345668999998888
Q ss_pred hhhcCC-cEE-EEc-CCCCCCCC-----CHHHHHHHHHHhCCEEEEechhhcccccccccCCC--C----C-ccc-EEEe
Q 010008 238 AILFRP-KLI-IAG-ASAYPRDF-----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F----K-YCD-VVTT 301 (520)
Q Consensus 238 i~~~~p-klI-i~~-~s~~p~~~-----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p--~----~-~aD-iv~~ 301 (520)
++. .| +.| ++. .-+||+-+ .|..|++..++.+.+.+.|.| |-|+..++..... + + +.. +|+-
T Consensus 172 l~~-APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 172 LES-APEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred Hhh-CCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 876 44 333 333 23566633 378899999999999999988 6676554432211 1 1 222 6778
Q ss_pred ccCccc--CCCCceEE--EeeCCC---cchhhHHHhhcccC-CCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHH
Q 010008 302 TTHKSL--RGPRGGMI--FFKKDP---VLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 373 (520)
Q Consensus 302 S~hK~l--~GprgG~I--~~~~~~---~~~~~l~~~i~~~~-~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~n 373 (520)
||.|.+ .++|.|-+ +.+++. .....+...++... .|..+|.--.+.+..--.-.++.. ...+.+..++.+.
T Consensus 250 SFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~-~sik~MssRI~~M 328 (410)
T KOG1412|consen 250 SFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWI-QSIKTMSSRIKKM 328 (410)
T ss_pred hhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHH-HHHHHHHHHHHHH
Confidence 999985 68888743 223321 00111211222211 233344322222211111112221 2345666777777
Q ss_pred HHHHHHHHHHCCCEEecCCCCCeeE--EEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccC
Q 010008 374 CRALASRLVELGYKLVSGGSDNHLV--LVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRG 451 (520)
Q Consensus 374 a~~l~~~L~~~G~~v~~~gt~~~~~--~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g 451 (520)
+.+|.+.|..+| ++|+=.|+. +--+.-.|++...+..+.+.+.|..-. .| ||+.. |
T Consensus 329 R~aLrd~L~aL~----TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~-----------~G--RInis-----G 386 (410)
T KOG1412|consen 329 RTALRDHLVALK----TPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLS-----------DG--RINIS-----G 386 (410)
T ss_pred HHHHHHHHHhcC----CCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEec-----------CC--cEeee-----c
Confidence 777777776643 444433421 001233578889998888899999832 22 45443 4
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 010008 452 FSEKEFVAIADFIHEGVEIT 471 (520)
Q Consensus 452 ~~~~d~~~la~~i~~~l~~~ 471 (520)
++...++++|.+|+++++..
T Consensus 387 LN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 387 LNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred cccccHHHHHHHHHHHHHhh
Confidence 55689999999999998743
No 386
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.60 E-value=3.6e-05 Score=87.24 Aligned_cols=186 Identities=13% Similarity=0.050 Sum_probs=101.5
Q ss_pred HHHHHHHHHHhCCEEEEechhhccccccccc-C-CCCC-cccEEEeccCcccCCC--CceEEEeeCCCcchhhHHHhhcc
Q 010008 259 YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN 333 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~-~-~p~~-~aDiv~~S~hK~l~Gp--rgG~I~~~~~~~~~~~l~~~i~~ 333 (520)
+++++++|+++|++||+|+.+ .|+--.|.. . .-+. ..||++++ |.|+|. ..|.+++++ ++.+.+..
T Consensus 608 l~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f~~ 678 (817)
T PLN02974 608 QRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATE------EVFEAFRG 678 (817)
T ss_pred HHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcH------HHHHhhcc
Confidence 789999999999999999984 454222211 0 0011 36999888 999653 457777777 56555531
Q ss_pred -----cCCC-CCCCCChHHHHHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHH--CCCEEecCCC-CCeeEEEEec
Q 010008 334 -----AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVE--LGYKLVSGGS-DNHLVLVDLR 403 (520)
Q Consensus 334 -----~~~p-~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~i~~na~~l~~~L~~--~G~~v~~~gt-~~~~~~vd~~ 403 (520)
..+. ..+++......+|+ .+|+.+.+++. ....++.....+.+.+.|.+ ..++.+..-. ...+.-+++.
T Consensus 679 ~~~~~~~~hg~Ty~gnpl~cAaal-a~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~ 757 (817)
T PLN02974 679 PSKLDALLHGHSYTAHPMGCAAAA-KALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELD 757 (817)
T ss_pred ccccCCcccCCCCCcCHHHHHHHH-HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEe
Confidence 1122 22333333333333 35777665432 22223333333334444421 1122222100 1123334443
Q ss_pred CC----CCC---HHHHHHHHh-hcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHH
Q 010008 404 PM----GID---GARVEKILD-MASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGV 468 (520)
Q Consensus 404 ~~----g~~---~~~~~~~L~-~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l 468 (520)
.. +.+ +..+.+.+. +.||.++.. .+.||+-.|.+++ ++|++++.+.+.+.+
T Consensus 758 ~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~----------Gnvi~l~pP~~i~----~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 758 AEGSGSGYSSLYARSVVRRLRREDGIYARPL----------GNVVYLMCGPTTS----PETCTRLLRKVYRRL 816 (817)
T ss_pred cCCcccccchHHHHHHHHHHHHhCCEEEEec----------CCEEEEeCCCCCC----HHHHHHHHHHHHHHh
Confidence 21 111 234666677 899998531 2468886666654 899999999998765
No 387
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.35 E-value=0.00017 Score=73.42 Aligned_cols=198 Identities=20% Similarity=0.168 Sum_probs=108.5
Q ss_pred ecCChHHHHHHHHHhhC------CCCC--EEEEcCCCCCccccccccccccccccccceEEEEEcccC---CCC---CCC
Q 010008 164 QPLSGSPANFEVYTAIL------KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---EST---GLV 229 (520)
Q Consensus 164 ~~~sGs~A~~~~l~all------~pGD--~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~~~~v~~~~d---~~~---~~i 229 (520)
...|||+||..++..-. .|-+ .++.+.-.|.|+- .|. +...+ ......+.+ |+. ..-
T Consensus 121 f~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~t-lga------ls~~~--~s~y~~~~~p~~p~v~~~~yn 191 (433)
T KOG1401|consen 121 FCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRT-LGA------LSVTG--NSKYGLPFDPIAPDVVTAEYN 191 (433)
T ss_pred EecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcc-hhH------HHhhc--ccccCCCCCCCCCceeecccC
Confidence 45899999998875332 1223 3887776654431 121 11111 111111111 111 234
Q ss_pred CHHHHHHHhhhcC--CcEEEEcC-CCCCCCC-----CHHHHHHHHHHhCCEEEEechhhcccccccc--cCCCCC-cccE
Q 010008 230 DYDMLEKTAILFR--PKLIIAGA-SAYPRDF-----DYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDV 298 (520)
Q Consensus 230 D~d~le~~i~~~~--pklIi~~~-s~~p~~~-----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~--~~~p~~-~aDi 298 (520)
|..++++.++.++ .-+||+.. -..++.+ -+..|+++|+++|++||.|+.+. |+.-.+. ...-+. ..||
T Consensus 192 d~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI 270 (433)
T KOG1401|consen 192 DSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDI 270 (433)
T ss_pred CHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcc
Confidence 7899999998865 34566642 2233322 25688899999999999999854 4322111 011111 3588
Q ss_pred EEeccCcccC-CCCceEEEeeCCCcchhhHHHhhcccCC---CCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Q 010008 299 VTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNAVF---PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 374 (520)
Q Consensus 299 v~~S~hK~l~-GprgG~I~~~~~~~~~~~l~~~i~~~~~---p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na 374 (520)
.+.. |.|+ |...|...+++ ++.+.++..-- .+..++ +.....+-..+++++.++++ .+++.+.-
T Consensus 271 ~t~a--K~L~gGlPigA~~v~~------kV~~~i~~~~~l~hg~Tf~g-npLacsa~~~~l~~l~~~e~---~k~vs~~~ 338 (433)
T KOG1401|consen 271 TTVA--KPLGGGLPIGATGVRD------KVAEMISPGDHLYHGGTFSG-NPLACSAGIKVLDELKDPET---LKNVSKIG 338 (433)
T ss_pred eeeh--hhccCCceeEEEeehH------HHHhhcCCCCccccCcccCC-ChhhhhHHHHHHHHHcCHHH---HHHHHHHH
Confidence 7766 9885 44558888887 67777765432 112222 22233333446788777665 34444445
Q ss_pred HHHHHHHHH
Q 010008 375 RALASRLVE 383 (520)
Q Consensus 375 ~~l~~~L~~ 383 (520)
+.|.+.|.+
T Consensus 339 k~L~~~l~e 347 (433)
T KOG1401|consen 339 KELRKLLDE 347 (433)
T ss_pred HHHHHHHHH
Confidence 555555544
No 388
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.27 E-value=7.5e-05 Score=76.91 Aligned_cols=254 Identities=15% Similarity=0.104 Sum_probs=122.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHHHHHHhhC---
Q 010008 104 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 180 (520)
Q Consensus 104 ~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~~~l~all--- 180 (520)
+-.|.|.+++...+... ....+. .+ .++ ...++ .+++.++++-..+. .....||++|+..++....
T Consensus 32 h~~p~i~~ai~~~~~~~-~~~~~~-~~--~~~---~~~~l-a~~L~~~~p~~~~~---v~f~~sGseAve~Alkla~~~~ 100 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKL-NYVSFS-GF--THP---EAAEL-AEKLAELFPGGLDR---VFFANSGSEAVEAALKLARQYH 100 (339)
T ss_dssp BT-HHHHHHHHHHHHHC-SSCSTT-TS--EEH---HHHHH-HHHHHHHSSTTEEE---EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCccccchhHHHHhhhc-cccccc-ce--ecc---chhhh-hhhhhhccccccce---eeeccCchHHHHHHHHHhhccc
Confidence 34688888887766432 211111 11 112 22222 36778888332221 2345799999998876433
Q ss_pred ----CCC-CEEEEcCCCCCccccccccc------cccccccccceEEEEEcccCCCC---CCCCHHHHHHHhh---hcCC
Q 010008 181 ----KPH-DRIMGLDLPHGGHLSHGFMT------PKRRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAI---LFRP 243 (520)
Q Consensus 181 ----~pG-D~Vl~~~~~~~ghls~g~~~------~~~~v~~~g~~~~~v~~~~d~~~---~~iD~d~le~~i~---~~~p 243 (520)
.+| .+|+...-.|.|.-. +... .+....-....+..++++-. .. ..-..+.+++.+. ..+.
T Consensus 101 ~~~~~~~r~~il~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i 178 (339)
T PF00202_consen 101 NKRAYTGRRKILAFEGSYHGRTL-GALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEI 178 (339)
T ss_dssp HHTHHHTTTEEEEETTTB-TSSH-HHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGE
T ss_pred ccccccCCceEEEeeeeeeccCc-ccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcE
Confidence 233 688888766544311 1000 00000000011122232210 00 0001112333332 2234
Q ss_pred cEEEEcCC-CC-CC----CCCHHHHHHHHHHhCCEEEEechhhcccccccccC--CCCC-cccEEEeccCcccCC-CCce
Q 010008 244 KLIIAGAS-AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG-PRGG 313 (520)
Q Consensus 244 klIi~~~s-~~-p~----~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~--~p~~-~aDiv~~S~hK~l~G-prgG 313 (520)
.+||+..- .. +. ..-+++|+++|+++|+++|+|+.+. |+--.|..- .... ..|+++++ |.|.| ...|
T Consensus 179 aavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~s 255 (339)
T PF00202_consen 179 AAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPIS 255 (339)
T ss_dssp EEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEE
T ss_pred EEEEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhhhcc
Confidence 56777632 11 11 2237999999999999999999854 432112100 0001 36999987 99954 4448
Q ss_pred EEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Q 010008 314 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 383 (520)
Q Consensus 314 ~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~~l~~~L~~ 383 (520)
.+++++ ++.+.+.......+.++......+++ ..|+.+.++++ .+++.+..++|.+.|++
T Consensus 256 av~~~~------~i~~~~~~~~~~~T~~g~p~~~aaa~-~~l~~~~~~~~---~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 256 AVLGSE------EIMEAFQPGSHGSTFGGNPLSCAAAL-ATLEILEEEDL---LERVRELGERLREGLRE 315 (339)
T ss_dssp EEEEEH------HHHTTSCTTSSTCTTTT-HHHHHHHH-HHHHHHHHTTH---HHHHHHHHHHHHHHHHH
T ss_pred cccccc------hhhccccccccccccccchHhhhhhh-hHHHhhccHHH---HHHHHHHHHHHHHHHHH
Confidence 888888 67666644333333444333333333 35666554433 34455555666665544
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.26 E-value=0.00043 Score=67.59 Aligned_cols=340 Identities=19% Similarity=0.200 Sum_probs=170.7
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChHHHHH
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 173 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs~A~~ 173 (520)
+.|+-.+--.-..|.|.+|....+..-. ...||. -|++-+-++.....+-+++ +...+.|||+||.
T Consensus 51 DCInNVaHvghchp~VV~A~~kQmat~~----tN~RFl-----hd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAND 116 (452)
T KOG1403|consen 51 DCINNVAHVGHCHPEVVRAGAKQMATIS----TNNRFL-----HDELVQCARTLTSTLPELS-----VCFFVNSGSEAND 116 (452)
T ss_pred HHhhhhhhcccCCHHHHHHHHHHHhHhc----ccchhh-----HHHHHHHHHHHhhcCCCce-----EEEEecCCchhhH
Confidence 4455555555567888887665554221 223432 2455533333333333433 4556789999999
Q ss_pred HHHHhh--CCCCCEEEEcCCCCCcccccccccccccccccc-----ceEEEEEccc------C----C--CCCCCCHHHH
Q 010008 174 EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----IYFESMPYRL------D----E--STGLVDYDML 234 (520)
Q Consensus 174 ~~l~al--l~pGD~Vl~~~~~~~ghls~g~~~~~~~v~~~g-----~~~~~v~~~~------d----~--~~~~iD~d~l 234 (520)
+++.-. ......|++++..|.||++.-.....-+.+--+ -|+.+-+.|- . + +.+..=.|.+
T Consensus 117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~v 196 (452)
T KOG1403|consen 117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPV 196 (452)
T ss_pred HHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHH
Confidence 888643 223444666777788887543210000010000 1111111110 0 0 0011112445
Q ss_pred HHHhhhc--CCcE---EEEc--CCCCCCCC----CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC----cccEE
Q 010008 235 EKTAILF--RPKL---IIAG--ASAYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVV 299 (520)
Q Consensus 235 e~~i~~~--~pkl---Ii~~--~s~~p~~~----d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~----~aDiv 299 (520)
++++... +-.. .|.. .|.-+.++ -++.+.+..+.+|-..|.|+.|. |+--.|.+-+.+. -.|||
T Consensus 197 k~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPDIV 275 (452)
T KOG1403|consen 197 KEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPDIV 275 (452)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccchh
Confidence 5555432 1111 1221 12222233 36777888888999999999864 4333333444443 25788
Q ss_pred EeccCccc-CCCCceEEEeeCCCcchhhHHHhhccc---CCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 300 TTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 300 ~~S~hK~l-~GprgG~I~~~~~~~~~~~l~~~i~~~---~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
+.. |.+ .|...+.+.+.+ ++.+.+... .|. ..||.......++++ ++.+..+.+.+..+++-+...
T Consensus 276 tmg--KpmGNGhPVa~Vattk------eIA~Af~atgv~YFN-TyGGnPVsCAv~laV-m~v~e~E~Lq~ha~~vG~~L~ 345 (452)
T KOG1403|consen 276 TMG--KPMGNGHPVAAVATTK------EIAQAFHATGVEYFN-TYGGNPVSCAVGLAV-MRVCEDENLQEHAQQVGEKLE 345 (452)
T ss_pred eec--ccCCCCCeeeEEeccH------HHHHHhccccceehh-ccCCCchhHHHHHHH-HHHHhhhhHHHHHHHHHHHHH
Confidence 765 877 455668888888 677766541 233 345545544445543 555444344444444433333
Q ss_pred HHHHHHHHCCCEEecCCCCCeeEE-EEecCCC---C-CHHH---HHHHH-hhcCeEEcCCCCCCCCCCCCCCEEEEccCC
Q 010008 376 ALASRLVELGYKLVSGGSDNHLVL-VDLRPMG---I-DGAR---VEKIL-DMASITLNKNSVPGDKSALVPGGIRIGSPA 446 (520)
Q Consensus 376 ~l~~~L~~~G~~v~~~gt~~~~~~-vd~~~~g---~-~~~~---~~~~L-~~~gI~v~~~~~Pg~~~~~~~~giRig~~~ 446 (520)
.+...++. ..+++.+-..-.++| +|+-... . +.++ +...| +.++|.++.. -| ...-+.|-.|
T Consensus 346 ~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD-GP------h~NilKiKPP- 416 (452)
T KOG1403|consen 346 VLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD-GP------HRNILKIKPP- 416 (452)
T ss_pred HHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC-CC------CCceeecCCC-
Confidence 33333332 345554322223333 4542211 1 1122 33344 4578998643 12 2345666533
Q ss_pred ccccCCCHHHHHHHHHHHHHHHHH
Q 010008 447 MTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 447 ~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
++ +++++.++++..+++++..
T Consensus 417 mC---Fneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 417 MC---FNEENADEFVLGLDEILTV 437 (452)
T ss_pred cc---cChhhHHHHHHHHHHHHHH
Confidence 44 7899999999999999874
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.24 E-value=1.5e-05 Score=79.60 Aligned_cols=283 Identities=13% Similarity=0.082 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHHcCCC-CCCCceeeecCChH-HHHHHHHHhhCCC----C--CEEEEcCCCCCcccccccccccccc
Q 010008 137 IDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKP----H--DRIMGLDLPHGGHLSHGFMTPKRRV 208 (520)
Q Consensus 137 ~d~lE~~a~~~~~~lfg~~-~~~~~~~V~~~sGs-~A~~~~l~all~p----G--D~Vl~~~~~~~ghls~g~~~~~~~v 208 (520)
..+||+.. .++.++.|=- .+.- .|.+.+|+ +.+++++.||... + -.|+...|-|... ...+. .
T Consensus 45 s~eL~~~I-r~LH~~VGNAvt~gr--~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y-----~~qt~-~ 115 (363)
T PF04864_consen 45 SPELERQI-RRLHRVVGNAVTDGR--YIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSY-----PEQTD-F 115 (363)
T ss_dssp -HHHHHHH-HHHHHHH-SB--TTS--EEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHH-----HHHCC-C
T ss_pred cHHHHHHH-HHHHHHhccccccCc--EEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccch-----HHHHH-h
Confidence 45777544 4677777632 2222 34567888 8888899888422 2 2677766644322 11110 0
Q ss_pred ccccceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCCCCHHHHHH-HHHHhCCEEEEechhhcccccc
Q 010008 209 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAA 286 (520)
Q Consensus 209 ~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklI-i~~~s~~p~~~d~~~i~~-ia~~~g~~li~D~Ah~~gli~~ 286 (520)
+.+..|+. .-|...+. +-+ . ....| ++++||||.- .|++ +.+..+..+|.|-|+|.-..
T Consensus 116 -f~s~~y~w---~Gda~~~~-~~~-------~-~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy-- 176 (363)
T PF04864_consen 116 -FDSRLYKW---AGDASNFK-NSD-------N-PSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY-- 176 (363)
T ss_dssp -T-BTTEEE---EEECCCGT-T-S---------CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT--
T ss_pred -ccccCccc---cccHHhhc-cCC-------C-CCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc--
Confidence 11111221 11222221 100 0 12334 6778999851 1222 33555677899999764432
Q ss_pred cccCCCCC-cccEEEeccCcc--cCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhc----
Q 010008 287 SVVADPFK-YCDVVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ---- 359 (520)
Q Consensus 287 ~~~~~p~~-~aDiv~~S~hK~--l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~---- 359 (520)
.|.+-+ .-||+.||++|. .+|-|.||.+.+++ +..+++...+.-...|...-.++-++- -|+.+.
T Consensus 177 --TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLRa~k-iLk~v~~~~~ 248 (363)
T PF04864_consen 177 --TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLRALK-ILKVVLDGYG 248 (363)
T ss_dssp --S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHHHHH-HHHHHHHHCC
T ss_pred --cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHHHHH-HHHHHHhccc
Confidence 111111 347999999994 36778899999986 666665543332334544444444332 122211
Q ss_pred Cc----hhHHHH-HHHHHHHHHHHHHHHHC-CCEEec--CC----------CCCeeEEEEecCCCCCHHHHHHHHhhcCe
Q 010008 360 SP----EFKVYQ-NKVVSNCRALASRLVEL-GYKLVS--GG----------SDNHLVLVDLRPMGIDGARVEKILDMASI 421 (520)
Q Consensus 360 ~~----~~~~~~-~~i~~na~~l~~~L~~~-G~~v~~--~g----------t~~~~~~vd~~~~g~~~~~~~~~L~~~gI 421 (520)
.. .+=++. +...++-+.|.+.+... -|.+.. ++ ...-+.|+.+...+ .++++..|++.||
T Consensus 249 ~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee--d~DC~~~l~~~~I 326 (363)
T PF04864_consen 249 TEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE--DEDCYAVLREAKI 326 (363)
T ss_dssp HHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG--GSSHHHHHHCTTE
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc--cccHHHHHHhCCc
Confidence 00 121222 23333445566666542 233321 10 11236788776432 2568999999999
Q ss_pred EEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHH
Q 010008 422 TLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEG 467 (520)
Q Consensus 422 ~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~ 467 (520)
..+.+...|. .+.++|||+. .+++||+.+.+.|..+
T Consensus 327 ~tr~G~~fga----~~ryVRlSml------~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 327 ITRSGVLFGA----DSRYVRLSML------KRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEGGGGTS-----TTEEEEESS------S-HHHHHHHHHHHHCC
T ss_pred ccCCCCccCC----CCCeEEEecc------CCHHHHHHHHHHHHhh
Confidence 9976643332 4679999964 4589999999888643
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.72 E-value=0.0012 Score=65.89 Aligned_cols=207 Identities=19% Similarity=0.269 Sum_probs=115.4
Q ss_pred HHHHHHHhhhcC----C-cEEEEc------CCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccc--c-CCCCC-c
Q 010008 231 YDMLEKTAILFR----P-KLIIAG------ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV--V-ADPFK-Y 295 (520)
Q Consensus 231 ~d~le~~i~~~~----p-klIi~~------~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~--~-~~p~~-~ 295 (520)
++++|++|..++ | ..||+. .-|.....-+..+++|+++||+.+|+|+.|.-|-.-+.. + ...++ -
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 577888887654 3 245553 122223445889999999999999999988643221111 0 11122 2
Q ss_pred ccEEEeccCcccCCCCceEEEeeCCCcchhhHHHhhcccCCCCCCCCChHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Q 010008 296 CDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 375 (520)
Q Consensus 296 aDiv~~S~hK~l~GprgG~I~~~~~~~~~~~l~~~i~~~~~p~~~g~p~~~~iaala~al~~~~~~~~~~~~~~i~~na~ 375 (520)
.|+|++| |-|. -||+ +.++ ++.-.--...|..+.|-|.-..+.. ..++++.. +...+++..--+
T Consensus 335 pD~vTFS--KK~q--~gGf-fh~~------~frpn~pYrifNTWmGdP~k~lll~--~vv~~I~~---~~Ll~n~~~vG~ 398 (484)
T KOG1405|consen 335 PDVVTFS--KKFQ--TGGF-FHDE------EFRPNEPYRIFNTWMGDPSKNLLLE--EVVQEIKR---EDLLNNVAHVGK 398 (484)
T ss_pred ccceehh--hhhh--cCcc-ccCc------ccCCCchHHHhhhhcCChHHHHHHH--HHHHHHhH---HHHHHHHHHHHH
Confidence 7999887 6552 2452 3333 3332222234666677766544443 23455443 233444444455
Q ss_pred HHHHHHHHC-----C-CEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccc
Q 010008 376 ALASRLVEL-----G-YKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTT 449 (520)
Q Consensus 376 ~l~~~L~~~-----G-~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt 449 (520)
.|...|.++ | +.-. .|. ..+..||+.... -.+.+...+...|+.+.. .+...||+- |.++
T Consensus 399 ~l~~gL~~Lq~~~p~~~~~~-RGr-GTF~a~d~ps~~-~Rdk~i~~~~~nGv~~GG---------Cg~~siRfR-PsLv- 464 (484)
T KOG1405|consen 399 ALLKGLLELQAKYPGKINNL-RGR-GTFIAWDCPSGS-IRDKLILIARLNGVNLGG---------CGDKSIRFR-PSLV- 464 (484)
T ss_pred HHHHHHHHHHHhCchhhhcc-ccc-ceEEEEeCCChH-HHHHHHHHHHHcCceecc---------cccceeeec-ccee-
Confidence 666666542 1 1111 232 235677886422 235567777889988843 234568874 3344
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 010008 450 RGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 450 ~g~~~~d~~~la~~i~~~l~ 469 (520)
+.+...+.+.+.+++++.
T Consensus 465 --f~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 465 --FRKHHADIFLDIFDKILA 482 (484)
T ss_pred --ehhhhHHHHHHHHHHHhc
Confidence 557777788888877664
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.54 E-value=0.00025 Score=64.18 Aligned_cols=54 Identities=15% Similarity=0.093 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHcC--C--CCCCCceeeecCChH-HHHHHHHHhhCCCCCEEEEcCCCCCc
Q 010008 138 DELETLCQKRALAAFN--L--DENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGG 195 (520)
Q Consensus 138 d~lE~~a~~~~~~lfg--~--~~~~~~~~V~~~sGs-~A~~~~l~all~pGD~Vl~~~~~~~g 195 (520)
.++.+...+++.+.+| + +++ +|.+++|+ +|+..++.++++|||.|++++|.|.|
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd----~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDAD----MIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchh----heEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 4566667789999988 3 454 56678888 89999999999999999999997653
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.27 E-value=0.0094 Score=58.10 Aligned_cols=329 Identities=16% Similarity=0.221 Sum_probs=170.6
Q ss_pred ccceEecCCCCChHHHHHHHhhhhhccCCCCC----CCCCCCCcchhHHHHHHHHHHHHHHHcCCCCCCCceeeecCChH
Q 010008 94 KSLELIASENFTSRAVMEAVGSCLTNKYSEGL----PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 169 (520)
Q Consensus 94 ~~i~Liasen~~~~~V~ea~~s~l~~~y~~G~----p~~ryy~g~~~~d~lE~~a~~~~~~lfg~~~~~~~~~V~~~sGs 169 (520)
..+++.|+.--+|..|++.++..+.|--.-|. -..| +.++...++ .+...+.+|++++.. +.+...-.+|+
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHR---sk~f~kii~-~tes~lreLlniPdn-~~vlf~QGGGt 81 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHR---SKDFAKIIN-DTESLLRELLNIPDN-YKVLFLQGGGT 81 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEeccc---chhHHHHHH-HHHHHHHHHHcCCCc-eeEEEEeCCCc
Confidence 56888888888999999998888876543332 1233 233333443 345778899999754 32333335666
Q ss_pred HHHHHHHHhh--CCCC---CEEEEcCCCCCccccccccccccccccccce--EEEEEcccCCCC--CCCCHHHHHHHhhh
Q 010008 170 PANFEVYTAI--LKPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY--FESMPYRLDEST--GLVDYDMLEKTAIL 240 (520)
Q Consensus 170 ~A~~~~l~al--l~pG---D~Vl~~~~~~~ghls~g~~~~~~~v~~~g~~--~~~v~~~~d~~~--~~iD~d~le~~i~~ 240 (520)
.-..++...| ++.| |.|+.-+... ++..-+.++ ...+..+..+.+ ..+|.+.++...
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGsWS~------------KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~~-- 147 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGSWSA------------KAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELNP-- 147 (370)
T ss_pred ccccccchhhhccccCCccceEEeccccH------------HHHHHHHhhCCceEEeccccccccCcCCChhhcccCC--
Confidence 4444454554 3555 5555432210 001001111 122222222222 245655543211
Q ss_pred cCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC--cccEEEeccCcccCCCCc-eEEEe
Q 010008 241 FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFF 317 (520)
Q Consensus 241 ~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~--~aDiv~~S~hK~l~Gprg-G~I~~ 317 (520)
+.+.+..+....-.-..++.+- +-.-+|+++++|++ +.++. .|++ .-+++.....|.. ||-| -+++.
T Consensus 148 -da~yvyyCaNETVHGVEf~~~P-~~~~~~~vlVaDmS--SnflS-----rpvDvsk~gvi~aGAQKN~-G~aG~Tvviv 217 (370)
T KOG2790|consen 148 -DASYVYYCANETVHGVEFDFIP-VNDPKGAVLVADMS--SNFLS-----RPVDVSKFGVIFAGAQKNV-GPAGVTVVIV 217 (370)
T ss_pred -CccEEEEecCceeeceecCCCC-CCCCCCceEEEecc--cchhc-----CCccchhcceEEecccccc-CccccEEEEE
Confidence 2344544322110001111110 11346999999985 34332 2332 3457888899986 5666 66677
Q ss_pred eCCCcchhhHHHhhcc---cCC--------CCCCCCChHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHH-C
Q 010008 318 KKDPVLGVELESAINN---AVF--------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVE-L 384 (520)
Q Consensus 318 ~~~~~~~~~l~~~i~~---~~~--------p~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~i~~na~~l~~~L~~-~ 384 (520)
++ ++..+... .++ ..+..+|....|..+...|+.+++.+ .++..+.-.+.++.+.+.+.+ .
T Consensus 218 r~------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 218 RK------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred eh------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77 33332211 111 11234555555656666677666544 467777777888999999987 4
Q ss_pred CCEEec--CCCCCee-EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHH
Q 010008 385 GYKLVS--GGSDNHL-VLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIA 461 (520)
Q Consensus 385 G~~v~~--~gt~~~~-~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la 461 (520)
||-... +...+.+ +.+.+.+..+..+.+.+..++.=|.+ -|+.+ -||||.|+- + .++-++.+.++
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~L-----KGhRS---VGGiRASlY--N--Aisv~~~q~L~ 359 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQL-----KGHRS---VGGIRASLY--N--AISVEEVQKLA 359 (370)
T ss_pred CeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhcc-----ccccc---cccchhhhh--c--cccHHHHHHHH
Confidence 765432 1111222 12233333333344444444333332 34433 578998863 2 25689999999
Q ss_pred HHHHHHHH
Q 010008 462 DFIHEGVE 469 (520)
Q Consensus 462 ~~i~~~l~ 469 (520)
.++++..+
T Consensus 360 ~~m~~F~k 367 (370)
T KOG2790|consen 360 AFMKEFQK 367 (370)
T ss_pred HHHHHHHH
Confidence 99987654
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.05 E-value=0.08 Score=57.15 Aligned_cols=201 Identities=16% Similarity=0.180 Sum_probs=112.8
Q ss_pred CcEEEEcCCCCC-CCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCC-cccEEEeccCcc-----cCCCCceEE
Q 010008 243 PKLIIAGASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS-----LRGPRGGMI 315 (520)
Q Consensus 243 pklIi~~~s~~p-~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~-~aDiv~~S~hK~-----l~GprgG~I 315 (520)
...|++-+|..- .+.|+.++.+.|++.|..+++- ..+.+.-....|-+ |+||+++|.... +.||..||.
T Consensus 248 v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFf 323 (1001)
T KOG2040|consen 248 VSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFF 323 (1001)
T ss_pred eeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHH
Confidence 455677777644 4889999999999999887652 23333333344555 899999999874 367777777
Q ss_pred EeeCCC-----------------cchhhH-----HHhhcccCCCCCCCCChHHHHHHHHHHHH-HhcCchhHHHHHHHHH
Q 010008 316 FFKKDP-----------------VLGVEL-----ESAINNAVFPGLQGGPHNHTIGGLAVCLK-HAQSPEFKVYQNKVVS 372 (520)
Q Consensus 316 ~~~~~~-----------------~~~~~l-----~~~i~~~~~p~~~g~p~~~~iaala~al~-~~~~~~~~~~~~~i~~ 372 (520)
.+++.. ...+.+ ++.|++-.-....++ .-..+|-+++-+. .....++++..+++..
T Consensus 324 Av~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICT-AQALLANmaAmyaiYHGp~gL~~IArrvh~ 402 (1001)
T KOG2040|consen 324 AVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICT-AQALLANMAAMYAIYHGPHGLKEIARRVHN 402 (1001)
T ss_pred HHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhH-HHHHHHHHHHHHhhhcCcHHHHHHHHHHHH
Confidence 665521 000111 111221110000011 0001111111111 1223456888899999
Q ss_pred HHHHHHHHHHHCCCEEecCCCCCeeEEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCC
Q 010008 373 NCRALASRLVELGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGF 452 (520)
Q Consensus 373 na~~l~~~L~~~G~~v~~~gt~~~~~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~ 452 (520)
....|...|+..|.+++.. .++-.+.++- +-+.+++...-.+.+|-.+. +..+.|-+++..- .
T Consensus 403 ~T~~l~~~l~~aghel~~k---~fFDTLkI~~-~~s~~~~l~rA~~~~iNlr~---------~ed~tigvslDET----v 465 (1001)
T KOG2040|consen 403 LTLILAEGLKNAGHELQHK---PFFDTLKIRC-GCSAEEVLDRAAKRQINLRL---------VEDGTIGVSLDET----V 465 (1001)
T ss_pred HHHHHHHHHhhcchhhccc---cccceEEEEe-cCcHHHHHHHHHhhcCceEE---------eecCceEEeeccc----c
Confidence 9999999999888777653 2332333332 22456655555555565532 1234455665543 3
Q ss_pred CHHHHHHHHHHHH
Q 010008 453 SEKEFVAIADFIH 465 (520)
Q Consensus 453 ~~~d~~~la~~i~ 465 (520)
+++|++.+...+.
T Consensus 466 ~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 466 TEKDVDDLLWVFN 478 (1001)
T ss_pred cHHHHHHHHHHHc
Confidence 4899999888876
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.75 E-value=0.24 Score=48.07 Aligned_cols=112 Identities=21% Similarity=0.265 Sum_probs=74.6
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCC----CCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccC-----CCCCcc
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASA----YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-----DPFKYC 296 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~----~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~-----~p~~~a 296 (520)
..-|++.+++.+.+..+..|++-.+. -|+ +.++++|+.||..|+++-++..|+ |+-...... --....
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gri 216 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGRI 216 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhccH
Confidence 45689999999988778866664332 244 567999999999999999999874 322111000 001136
Q ss_pred cEEEeccCcccCCCCceEEEee-CCCcchhhHHHhhcccCCCCC-CCCChHH
Q 010008 297 DVVTTTTHKSLRGPRGGMIFFK-KDPVLGVELESAINNAVFPGL-QGGPHNH 346 (520)
Q Consensus 297 Div~~S~hK~l~GprgG~I~~~-~~~~~~~~l~~~i~~~~~p~~-~g~p~~~ 346 (520)
|.++-|+.|.|.-|-||.|+.. ++ .+.+.|.+. +||- ...|+..
T Consensus 217 da~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgrasa~ps~d 262 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGRASASPSLD 262 (432)
T ss_pred HHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCccccCccHH
Confidence 8899999999999999766542 32 566666554 6665 3344443
No 396
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=72.77 E-value=10 Score=35.38 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=47.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCc
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 305 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK 305 (520)
.+.++++.++++. ...+|-+..+.-++...++++.+-.|+.+.++|.|.+-........ . .++|++.+|++=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~A~--~---~G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAINAA--E---LGFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHHH--H---TT-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHHHH--H---cCCCEEEccccc
Confidence 4678899998887 8899999988877778899999988998899999986432221110 0 168999988664
No 397
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=68.85 E-value=11 Score=35.52 Aligned_cols=71 Identities=20% Similarity=0.137 Sum_probs=51.1
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCC-CHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccCc
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 305 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~~~-d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~hK 305 (520)
..++++++++.. ...+|.+..+.-++.. ++++|.+-.+..|.++|.|.+..-..... +. .|+||+-+|+|=
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~a--~~---~G~D~IGTTLsG 157 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLNA--HK---LGFDIIGTTLSG 157 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHHHH--HH---cCCcEEeccccc
Confidence 456788888877 7888888888777766 89999988888999999998632211110 01 168998887664
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=61.72 E-value=19 Score=37.43 Aligned_cols=58 Identities=19% Similarity=0.378 Sum_probs=44.3
Q ss_pred CCCC-CCHHHHHHHhhhc----CCcEEEE--cCCCCCC----CCCHHHHHHHHHHhCCEEEEechhhcc
Q 010008 225 STGL-VDYDMLEKTAILF----RPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 282 (520)
Q Consensus 225 ~~~~-iD~d~le~~i~~~----~pklIi~--~~s~~p~----~~d~~~i~~ia~~~g~~li~D~Ah~~g 282 (520)
.+|. .++++++.++... +++++++ |.+.||+ ..|+..|..+-+..++++++|..|..|
T Consensus 231 k~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 231 KRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 3565 6888887766432 4678888 4666764 469999998888899999999999877
No 399
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=61.08 E-value=20 Score=35.13 Aligned_cols=58 Identities=16% Similarity=0.319 Sum_probs=42.6
Q ss_pred CC-CCCHHHHHHHhhhc----CCcEEEE--cCCCCCC----CCCHHHHHHHHHHhCCEEEEechhhccc
Q 010008 226 TG-LVDYDMLEKTAILF----RPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGL 283 (520)
Q Consensus 226 ~~-~iD~d~le~~i~~~----~pklIi~--~~s~~p~----~~d~~~i~~ia~~~g~~li~D~Ah~~gl 283 (520)
++ ..++++++.+++.. +++++++ |.+.||. ..|+..|..+.+..++.+++|.+|..|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 45 67888877665432 4677777 3455554 5788888888888999999999998763
No 400
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=57.76 E-value=1.4e+02 Score=32.23 Aligned_cols=91 Identities=19% Similarity=0.184 Sum_probs=53.5
Q ss_pred CCCCHHHHHHHhhhc----CCcEEEEc---CCCCCCCCCHHHHHHHHHHhC-CEEEEechhhcccccccccCCCC-C---
Q 010008 227 GLVDYDMLEKTAILF----RPKLIIAG---ASAYPRDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVADPF-K--- 294 (520)
Q Consensus 227 ~~iD~d~le~~i~~~----~pklIi~~---~s~~p~~~d~~~i~~ia~~~g-~~li~D~Ah~~gli~~~~~~~p~-~--- 294 (520)
|.+|--.+++.+.+. |.-+|+++ .+-.+....+-+|.+||++++ .|++.-+-..+.++... |+.. .
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~ae--pnnil~HV~ 349 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCAE--PNNILGHVE 349 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeecC--cccchhHHH
Confidence 579998888887652 34445443 444445667889999999987 88887653333343322 2222 1
Q ss_pred -cccEEEeccCcccCCCCceEEEeeC
Q 010008 295 -YCDVVTTTTHKSLRGPRGGMIFFKK 319 (520)
Q Consensus 295 -~aDiv~~S~hK~l~GprgG~I~~~~ 319 (520)
..|-++...--||+-|..-++...+
T Consensus 350 eqldSMal~ialWLGiPSaPiV~LHR 375 (838)
T KOG0630|consen 350 EQLDSMALNIALWLGIPSAPIVLLHR 375 (838)
T ss_pred HHHhhccchhHHHhCCCCCceEEeec
Confidence 2344554445566555554554444
No 401
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=57.11 E-value=25 Score=34.71 Aligned_cols=57 Identities=14% Similarity=0.278 Sum_probs=42.3
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEE--cCCCC-CC---CCCHHHHHHHHHHhCCEEEEechhhcc
Q 010008 226 TGLV-DYDMLEKTAILF----RPKLIIA--GASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISG 282 (520)
Q Consensus 226 ~~~i-D~d~le~~i~~~----~pklIi~--~~s~~-p~---~~d~~~i~~ia~~~g~~li~D~Ah~~g 282 (520)
++.- ++++++.++... +.+++++ |.+.| |. ..|+..|..+.+..++.++.|..|..|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 4544 888887766543 3566665 35566 54 679999999988889999999999866
No 402
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=55.33 E-value=24 Score=29.80 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=40.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 276 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D 276 (520)
..++++++++.+.+ +|..|++|...++...-.++..+++++.++-++.-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 47999999999987 99999999777776555677789999999777764
No 403
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=54.53 E-value=26 Score=36.15 Aligned_cols=58 Identities=21% Similarity=0.307 Sum_probs=42.2
Q ss_pred CCCC-CHHHHHHHhhh----cCCcEEEEcC-----C-CCCC-CCCHHHHHHHHHHhCCEEEEechhhccc
Q 010008 226 TGLV-DYDMLEKTAIL----FRPKLIIAGA-----S-AYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 283 (520)
Q Consensus 226 ~~~i-D~d~le~~i~~----~~pklIi~~~-----s-~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gl 283 (520)
++.- +++++..+++. .+.+++++.- . .||+ ..|+..|..+-+..++.+|+|.+|+.|.
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 4444 88887665543 2567777642 2 5666 7899999999777799999999998874
No 404
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=53.00 E-value=36 Score=28.80 Aligned_cols=42 Identities=10% Similarity=-0.115 Sum_probs=32.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 270 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 270 (520)
...+++.+.+.+.+|++|.++.+......+..++.+.+++.+
T Consensus 37 ~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 37 VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 567788777777799999998776655667778888877763
No 405
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=51.68 E-value=46 Score=28.59 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=38.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
.++.++++.++.. +|.+|++|.-.......-.++.+..++.|+-+++-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5889999999987 8999999876665544456677788889998888543
No 406
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.81 E-value=43 Score=29.56 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=38.4
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 269 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~ 269 (520)
.+|+++.++.+ +.++++.+.+.+.+|++|.++..+......++++.+.+++.
T Consensus 30 ~G~eVi~LG~~-----vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 30 AGFEVINLGVM-----TSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 34577776543 56788888888889999999877666666677777777765
No 407
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=48.41 E-value=39 Score=29.54 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=39.8
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 271 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~ 271 (520)
.+|+++..+++ ..++++-+++.++++.+|.++.-+..+...++++.+.+++.|+
T Consensus 26 ~GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 26 AGFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 34677776654 5678887777777999998875555556678899998888754
No 408
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=44.42 E-value=22 Score=32.29 Aligned_cols=50 Identities=22% Similarity=0.352 Sum_probs=29.6
Q ss_pred CCcchhHHHHHHHHHHH-HHHHcCCCCCCCceeeecC--ChHHHHHHHHHhhCCCCCEEEEc
Q 010008 131 YGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPL--SGSPANFEVYTAILKPHDRIMGL 189 (520)
Q Consensus 131 y~g~~~~d~lE~~a~~~-~~~lfg~~~~~~~~~V~~~--sGs~A~~~~l~all~pGD~Vl~~ 189 (520)
+++|+++.. .+..++ .++.++++. ++|.|. .|.+.-.++|..+- |-|++-
T Consensus 65 ~Q~CEHlNR--ALvvEr~~a~~~~le~----V~VvP~~~AGGs~a~~Ay~~~~---dPV~VE 117 (172)
T TIGR01440 65 FQGCEHINR--ALVMERSVAEPLGMEE----VSVVPDLHAGGSLATYAFQHMK---DPVEVE 117 (172)
T ss_pred EechhhhhH--HHHHhHHHHHHcCCce----EEEecCCCCCcHHHHHHHHhCC---CCEEEE
Confidence 568887753 344455 788889886 677544 34444344666664 445443
No 409
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=44.39 E-value=46 Score=29.35 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=39.5
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 271 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~ 271 (520)
.+|+++..+++ ..++++-+++.++++.+|.+++-+..+...++++.+.+++.|.
T Consensus 28 ~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 28 AGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 34688776654 5678887777777999998865554445678888888888764
No 410
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=43.34 E-value=58 Score=33.00 Aligned_cols=53 Identities=17% Similarity=0.217 Sum_probs=37.1
Q ss_pred CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEech
Q 010008 226 TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 226 ~~~iD~d~le~~i~~~-----~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~A 278 (520)
...++.++++..++.. +-.+|+++.|--++ ...+.++.++|++.|+.+++|.+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECC
Confidence 3467777766654432 23567776655454 34589999999999999999975
No 411
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=42.88 E-value=41 Score=28.29 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=36.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh--CCEEEEechhh
Q 010008 229 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 280 (520)
Q Consensus 229 iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~--g~~li~D~Ah~ 280 (520)
.+.+++.+.+.+.+|++|.++.+..+......++.+.+++. ++.+++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45588888888889999998765444444556677776665 78888877653
No 412
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=42.08 E-value=59 Score=30.56 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=46.0
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 277 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g----~~li~D~ 277 (520)
.+|+++.++.+ +..+++.+.+.+.+|++|.++.+.......++++.+.+++.| +.+++=+
T Consensus 111 ~G~~vi~LG~~-----vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 111 NGFDVIDLGRD-----VPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred CCcEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 44688876654 667888888888899999998877777667888888888874 5666654
No 413
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=40.65 E-value=63 Score=27.65 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=35.3
Q ss_pred eEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh
Q 010008 214 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 269 (520)
Q Consensus 214 ~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~ 269 (520)
+|+++..+. ...++++.+.+.+.+|++|+++.........++++.+..++.
T Consensus 27 G~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 27 GFEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 356666443 356677777777779999999877654455677777777776
No 414
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=39.91 E-value=81 Score=33.08 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=40.4
Q ss_pred cccccceEEEEEcccCCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEe
Q 010008 208 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 276 (520)
Q Consensus 208 v~~~g~~~~~v~~~~d~~~~~iD~d~le~~i~~--~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D 276 (520)
.+.....-+.+.++........+.+.|.+.+.. -.-+++|++--+-+...+.+.+.++|++.|+++++|
T Consensus 107 ~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvD 177 (467)
T COG2870 107 LRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVD 177 (467)
T ss_pred eeeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEEC
Confidence 333333335555433211112334444444433 145788885433344667999999999999999999
No 415
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=38.68 E-value=68 Score=30.19 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=43.5
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC----CEEEEec
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 277 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g----~~li~D~ 277 (520)
.+|+++.++. .+..+++.+.+.+.+|++|.++.+.......++++.+..++.+ +.+++=+
T Consensus 109 ~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 109 NGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 3467766553 3667888888888899999998776666667888888777764 4566544
No 416
>PRK13690 hypothetical protein; Provisional
Probab=38.43 E-value=30 Score=31.78 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=26.6
Q ss_pred CCcchhHHHHHHHHHHH-HHHHcCCCCCCCceeeecCC--hHHHHHHHHHhhCC
Q 010008 131 YGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLS--GSPANFEVYTAILK 181 (520)
Q Consensus 131 y~g~~~~d~lE~~a~~~-~~~lfg~~~~~~~~~V~~~s--Gs~A~~~~l~all~ 181 (520)
+++|+++.. .+..++ +++.+|++. |+|.|.- |.+.-.++|..+-+
T Consensus 72 ~QcCEHLNR--ALvvEr~~a~~~~le~----V~VvP~~~AGGs~a~~Ay~~~~d 119 (184)
T PRK13690 72 VQGCEHLNR--ALVVEREVAEKYGLEI----VTVVPVLHAGGSLATAAYQHMKD 119 (184)
T ss_pred EechhhhHH--HHHHhHHHHHHcCCeE----EEEecCCCCCcHHHHHHHHhCCC
Confidence 568887753 233444 778889886 6775543 43333446666543
No 417
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.95 E-value=10 Score=36.67 Aligned_cols=82 Identities=24% Similarity=0.327 Sum_probs=52.3
Q ss_pred cCCCCCCCCHH-HHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEE
Q 010008 222 LDESTGLVDYD-MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 300 (520)
Q Consensus 222 ~d~~~~~iD~d-~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~ 300 (520)
+|+++-.||.- -+++++.. .-|-|.+... + .-|.++|+++=.++|+-++.=+.|..|+...+ ...-++++|+++
T Consensus 142 Ld~~tA~IDq~~Gv~~Aie~-Gyk~IaVTv~-~--~~~a~~iRe~e~~~~~~~~if~VHtTGis~ee-a~~~~~~aDivt 216 (259)
T TIGR03275 142 LDPDTATIDQIKGVEKAIEL-GYKKIAVTVA-D--AEDAKAIRELESESGIDIIIFAVHTTGIDRED-AEEVVQYADIVT 216 (259)
T ss_pred eCCccccccHHHHHHHHHHc-CCceEEEEec-C--HHHHHHHHHhccccCCcEEEEEEECCCCCHHH-HHHHHHhhhHHH
Confidence 34555667653 36666665 4444444322 1 23678888887777777777778888864332 122345899999
Q ss_pred eccCcccC
Q 010008 301 TTTHKSLR 308 (520)
Q Consensus 301 ~S~hK~l~ 308 (520)
...||+++
T Consensus 217 ~CASK~ir 224 (259)
T TIGR03275 217 SCASKNIR 224 (259)
T ss_pred HhchHHHH
Confidence 99999975
No 418
>PLN02672 methionine S-methyltransferase
Probab=35.71 E-value=4.5e+02 Score=31.62 Aligned_cols=53 Identities=15% Similarity=0.418 Sum_probs=40.4
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHhCCEEEEechhhcccc
Q 010008 232 DMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV 284 (520)
Q Consensus 232 d~le~~i~~~~pklIi~~~s~~p~--~~d~~~i~~ia~~~g~~li~D~Ah~~gli 284 (520)
|.+.++++..+|++|+.+.-.+-. .--++.|.+.+++.|++|+.|++.+..+.
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1082)
T PLN02672 517 DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELS 571 (1082)
T ss_pred hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeec
Confidence 366788888899999987544332 33577888999999999999998665554
No 419
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=35.45 E-value=77 Score=30.24 Aligned_cols=59 Identities=12% Similarity=0.092 Sum_probs=43.6
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC--CEEEEe
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMD 276 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g--~~li~D 276 (520)
.+|+++.++.+ +.++++.+.+.+.+|++|.++.....+...++++.+..++.+ +.+++=
T Consensus 115 ~G~~Vi~LG~~-----vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vG 175 (213)
T cd02069 115 NGYEVIDLGVM-----VPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIG 175 (213)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEE
Confidence 44688787654 678899888888899999998777666667788777777764 444443
No 420
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=35.35 E-value=74 Score=34.56 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=38.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHh--CCEEEEechhhc
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 281 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~--g~~li~D~Ah~~ 281 (520)
..++.+++.+.+.+++|++|.++.. .+......++.+++++. ++.+|+=+.|.+
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 4567788888888779999988633 23333455777778877 899998877653
No 421
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.42 E-value=58 Score=32.31 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=39.3
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEEc-----CCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcc
Q 010008 226 TGLV-DYDMLEKTAILF----RPKLIIAG-----ASAYPR-DFDYPRMRQIADAVGALLMMDMAHISG 282 (520)
Q Consensus 226 ~~~i-D~d~le~~i~~~----~pklIi~~-----~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~g 282 (520)
++.- +++++..++... +++++++- .++|+. ..|+..+..+-+..+..+++|..|..|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 4433 777776655432 45666653 346665 568888887777779999999999866
No 422
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=34.24 E-value=1.9e+02 Score=26.63 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCC
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 291 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~ 291 (520)
..+.++.+.+++..-+--+|++|.-......-.+++.+++++.++.++.=.-.+-+++..|+.+.
T Consensus 20 ~~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~~ 84 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDAK 84 (171)
T ss_pred cccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccCC
Confidence 45688888888875444467776433221234678999999999999986544556665555443
No 423
>KOG4759 consensus Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=32.92 E-value=3.9e+02 Score=26.30 Aligned_cols=87 Identities=13% Similarity=0.169 Sum_probs=47.0
Q ss_pred HHHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHHHHHH----HHhhcccchh
Q 010008 409 GARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEITLEA----KKLVQGSKLQ 484 (520)
Q Consensus 409 ~~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~~~~~----~~~~~~~~~~ 484 (520)
-..+....++.|.-++++ .....||++.|.+|+ +--+.++..+.+..+...+- ..++-.+..+
T Consensus 155 ikai~kAI~~S~lnltP~--------~dg~~l~vsiP~~T~-----E~Re~laK~~~~~~ee~K~slr~ir~~~~kk~~k 221 (263)
T KOG4759|consen 155 IKAILKAIEASGLNLTPN--------LDGTVLRVSIPPVTK-----ESREKLAKVLKRYFEEYKQSLRKIRTKSIKKSKK 221 (263)
T ss_pred HHHHHHHHHhCCCCCCcC--------CCCcEEEecCCCcCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355666666666655432 234569999999885 66666666666554443221 1111000011
Q ss_pred hhhcccCCCCccchHHHHHHHHHHHHHHhhC
Q 010008 485 DFMNFVTSPNFSLMNNVADLRGRVEALTTQF 515 (520)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~f 515 (520)
.+.+ +.. +++..+.+++.++...|
T Consensus 222 ~~~~-~~~------D~vkkae~~l~~l~k~~ 245 (263)
T KOG4759|consen 222 NKKS-LSE------DEVKKAEAELQKLAKDA 245 (263)
T ss_pred cccc-CCh------hHHHHHHHHHHHHHHHH
Confidence 1111 111 35788888888887754
No 424
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=32.67 E-value=76 Score=26.09 Aligned_cols=69 Identities=12% Similarity=0.256 Sum_probs=38.7
Q ss_pred cEEEEcCCCCCC-CCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEEeccC--cccCC-CCceEEEeeC
Q 010008 244 KLIIAGASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRG-PRGGMIFFKK 319 (520)
Q Consensus 244 klIi~~~s~~p~-~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~~S~h--K~l~G-prgG~I~~~~ 319 (520)
|+++++...-++ ..=-.++.++++++|+..-+|..+. +.......++|++++|.| ..+.. |. |.++.-.
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~v------~~~~~~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~~ 75 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCAV------DEIKALTDGADIIVTSTKLADEFEDIPK-GYVVITG 75 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEEe------cccccCCCcccEEEEehHhhhhcCcCCC-ceEEEEc
Confidence 555555444433 2223467889999999844443322 112222236899998877 45633 44 5555543
No 425
>TIGR03586 PseI pseudaminic acid synthase.
Probab=32.63 E-value=1.1e+02 Score=31.35 Aligned_cols=56 Identities=20% Similarity=0.416 Sum_probs=40.5
Q ss_pred CCCCCHHHHHHHhhhc----CCcEEEE-cCCCCCC---CCCHHHHHHHHHHhCCEE-EEechhhccc
Q 010008 226 TGLVDYDMLEKTAILF----RPKLIIA-GASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGL 283 (520)
Q Consensus 226 ~~~iD~d~le~~i~~~----~pklIi~-~~s~~p~---~~d~~~i~~ia~~~g~~l-i~D~Ah~~gl 283 (520)
+|.-++++++.++.-. +++++++ +.++||+ ..|+..|..+.+++++.+ ++| |..|.
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~ 205 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGI 205 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCch
Confidence 4556778877766432 3466654 4677876 678999999999999999 888 77663
No 426
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=31.67 E-value=1.5e+02 Score=25.04 Aligned_cols=50 Identities=18% Similarity=0.090 Sum_probs=38.0
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
..++.++++.++.. +|.+|++|.-.+.... -.++.+.++++|+-+-+-.+
T Consensus 38 ~~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 38 EDLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred ccCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 36889999988877 8999999866655433 47777888889988876543
No 427
>smart00642 Aamy Alpha-amylase domain.
Probab=31.46 E-value=36 Score=31.12 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.0
Q ss_pred CCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 252 AYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 252 ~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
.+++..+++++++-|+++|+.||.|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345567899999999999999999974
No 428
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=31.29 E-value=1.4e+02 Score=28.57 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=30.8
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEcCCCC---C--CCCC-------HHHHHHHHHHhCCEEEE
Q 010008 228 LVDYDMLEKTAI----LFRPKLIIAGASAY---P--RDFD-------YPRMRQIADAVGALLMM 275 (520)
Q Consensus 228 ~iD~d~le~~i~----~~~pklIi~~~s~~---p--~~~d-------~~~i~~ia~~~g~~li~ 275 (520)
.+++++|++.+. .+++++|++.+-.. + .... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 456777765543 44789999873221 1 1111 46788899999988887
No 429
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=30.75 E-value=1.2e+02 Score=31.10 Aligned_cols=50 Identities=34% Similarity=0.408 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCeEEcCCCCCCCC--CCCCCCEEEEcc-CCccccCCCHHHHHHHHHH
Q 010008 410 ARVEKILDMASITLNKNSVPGDK--SALVPGGIRIGS-PAMTTRGFSEKEFVAIADF 463 (520)
Q Consensus 410 ~~~~~~L~~~gI~v~~~~~Pg~~--~~~~~~giRig~-~~~tt~g~~~~d~~~la~~ 463 (520)
+.+.+.|+..||.+|+ .|.+. .-...+||||.. ..+| ++++++++.+.+-
T Consensus 158 ~~i~~ELe~~GIrlnk--~~p~V~I~kk~~gGI~i~~t~~l~--~~d~~~ir~iL~E 210 (365)
T COG1163 158 DIIERELEDVGIRLNK--RPPDVTIKKKESGGIRINGTGPLT--HLDEDTVRAILRE 210 (365)
T ss_pred HHHHHHHHhcCeEecC--CCCceEEEEeccCCEEEecccccc--cCCHHHHHHHHHH
Confidence 4688899999999987 44443 223468999954 3333 3667777766553
No 430
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=29.49 E-value=1.1e+02 Score=26.80 Aligned_cols=53 Identities=15% Similarity=0.056 Sum_probs=34.7
Q ss_pred ceEEEEEcccCCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 010008 213 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 270 (520)
Q Consensus 213 ~~~~~v~~~~d~~~~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 270 (520)
.+|+++..+.+ .+++++-+.+.+.++.+|.+++....+...++++.+..++.|
T Consensus 29 ~GfeVi~lg~~-----~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 29 LGFDVDVGPLF-----QTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CCcEEEECCCC-----CCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 34677665443 566777666666699999887554444445777777777754
No 431
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=28.19 E-value=1.9e+02 Score=24.35 Aligned_cols=51 Identities=20% Similarity=0.141 Sum_probs=37.7
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
..++.+++...+...+|.+|++|.-.... ..-+++.+..+++|+-+-+-.+
T Consensus 37 ~~l~~~~l~~~~~~~~peiliiGTG~~~~-~~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 37 SDLDPEALLPLLAEDRPDILLIGTGAEIA-FLPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred ccCCHHHHHHHHhhCCCCEEEEcCCCCCC-cCCHHHHHHHHHcCCeEEEeCc
Confidence 36889999988876239999998666654 3446788888899988776543
No 432
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=27.07 E-value=1.9e+02 Score=29.23 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEE-----cCCCC--CCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEE
Q 010008 227 GLVDYDMLEKTAILFRPKLIIA-----GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVV 299 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~-----~~s~~--p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv 299 (520)
..||.+++.++.++ .+..|+- +.... .+.-|++.-.++|+..++++++-..+---+. +..-.-+.-.||+
T Consensus 136 ~nid~d~i~aa~re-h~d~ivGlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~--dEvlerL~~GDIi 212 (386)
T COG3964 136 DNIDEDKIHAAFRE-HRDVIVGLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLM--DEVLERLRRGDII 212 (386)
T ss_pred hhCCHHHHHHHHHh-CcCcEEEEEEEeeeccccccCCchHHHHHHHHhhcCCceEEecCCCCccH--HHHHHhccCCcee
Confidence 36999999999988 5554431 12211 2367888888999999999987543210000 0000112246899
Q ss_pred EeccC
Q 010008 300 TTTTH 304 (520)
Q Consensus 300 ~~S~h 304 (520)
+..+|
T Consensus 213 tHcfn 217 (386)
T COG3964 213 THCFN 217 (386)
T ss_pred eeecc
Confidence 98776
No 433
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=25.92 E-value=5e+02 Score=23.98 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHH
Q 010008 410 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVE 469 (520)
Q Consensus 410 ~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~ 469 (520)
..+...+...++-+++ .. ....||+.+|.+| ++-=++++..+++..+
T Consensus 67 ~~I~kAI~~s~lglnP----~~----dg~~Iri~iP~lT-----~E~RkelvK~~k~~~E 113 (176)
T TIGR00496 67 NAIEKAIQRSDLGLNP----NN----DGSVIRVNFPPLT-----EERRKELVKHAKKIAE 113 (176)
T ss_pred HHHHHHHHHCCCCCCc----cc----CCCEEEecCCCCC-----HHHHHHHHHHHHHHHH
Confidence 5678888888876543 21 2347999999877 4555566666665543
No 434
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.65 E-value=35 Score=33.61 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.2
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 251 SAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 251 s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
+.+++..+++++++.|+++|+.||.|..
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 3344556899999999999999999975
No 435
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=25.41 E-value=7.4e+02 Score=26.30 Aligned_cols=49 Identities=18% Similarity=0.169 Sum_probs=28.7
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
.+.++++.+.+.+ ..+||.+.++....+..+.+....+...=.+++|.|
T Consensus 226 ~~~l~el~~~l~~--~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDia 274 (414)
T COG0373 226 AVALEELLEALAE--ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIA 274 (414)
T ss_pred eecHHHHHHhhhh--CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEec
Confidence 3456677666654 566666544433355555555554432228999986
No 436
>PF09872 DUF2099: Uncharacterized protein conserved in archaea (DUF2099); InterPro: IPR009181 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=24.49 E-value=15 Score=35.59 Aligned_cols=82 Identities=23% Similarity=0.327 Sum_probs=52.0
Q ss_pred cCCCCCCCCHH-HHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCcccEEE
Q 010008 222 LDESTGLVDYD-MLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 300 (520)
Q Consensus 222 ~d~~~~~iD~d-~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aDiv~ 300 (520)
+|+++..||.- -+++++.. .-|-|.+...+ ..+.++|+++=++.+.-++.=+.|..|+...+ ...-+.++|+++
T Consensus 142 Ld~~tA~IDq~~Gv~kAie~-Gyk~IaVTV~~---~~~A~~iRele~~~~~~~~if~VHtTGis~ee-A~~l~~~~Divt 216 (258)
T PF09872_consen 142 LDPETARIDQVEGVKKAIEM-GYKRIAVTVAD---AEDAKKIRELEKEEGVNIYIFGVHTTGISEEE-AERLFEYADIVT 216 (258)
T ss_pred eCCccccccHHHHHHHHHHc-CCceEEEEecC---HHHHHHHHHhhccCCCceEEEEEEccCCCHHH-HHHHHHHhHHHH
Confidence 45666777753 46677765 44444443221 23678888887667766666678888864322 112345899999
Q ss_pred eccCcccC
Q 010008 301 TTTHKSLR 308 (520)
Q Consensus 301 ~S~hK~l~ 308 (520)
...||+++
T Consensus 217 ~CASk~iR 224 (258)
T PF09872_consen 217 SCASKYIR 224 (258)
T ss_pred HhhhHHHH
Confidence 99999874
No 437
>PF01904 DUF72: Protein of unknown function DUF72; InterPro: IPR002763 The function of this family is unknown. Aquifex aeolicus has two copies of this protein. A probable aspartyl-tRNA synthetase from Escherichia coli [] belongs to this group.; PDB: 1VPY_A 1ZTV_A 1VPQ_A.
Probab=24.13 E-value=2.6e+02 Score=26.81 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=37.7
Q ss_pred EEEEecCCCCCHHHHHHHHhhcCeEEcCCCCCC---CCC-----CCCCCEEEE-ccCCc--cccCCCHHHHHHHHHHHHH
Q 010008 398 VLVDLRPMGIDGARVEKILDMASITLNKNSVPG---DKS-----ALVPGGIRI-GSPAM--TTRGFSEKEFVAIADFIHE 466 (520)
Q Consensus 398 ~~vd~~~~g~~~~~~~~~L~~~gI~v~~~~~Pg---~~~-----~~~~~giRi-g~~~~--tt~g~~~~d~~~la~~i~~ 466 (520)
+.|.++...+-.+++.+.|++.||..-..-.|. -.. .....++|+ |.... .....+++|++++++.|.+
T Consensus 120 ~avE~R~~sW~~~~~~~~l~~~~~~~v~~d~~~~~~~p~~~~~~~~~~~y~RlhG~~~~~~~~~~Ys~~eL~~~a~~i~~ 199 (230)
T PF01904_consen 120 YAVEFRHPSWFTEEVFELLREHGVALVIADSPRLPSLPPPEPQTTPDFAYVRLHGRNGEGWYDYRYSDEELEEWAERIRA 199 (230)
T ss_dssp EEEE--BGGGGCHHHHHHHHHTT-EEEEEE---BTTC------SSTTEEEEEE--S-TTTTTB----HHHHHHHHHHHHH
T ss_pred eEEecCCcchhhHHHHHHHHHcCCEEEEeCCcccCCCCCcccccCCCCeEEeeccCcccccccccCCHHHHHHHHHHHHH
Confidence 345666554545778899999998753211121 111 012347997 54443 3345688999999999987
Q ss_pred HHH
Q 010008 467 GVE 469 (520)
Q Consensus 467 ~l~ 469 (520)
...
T Consensus 200 ~~~ 202 (230)
T PF01904_consen 200 WAA 202 (230)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 438
>cd00520 RRF Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of protein synthesis. RRF is believed to bind the ribosome at the A-site in a manner that mimics tRNA, but the specific mechanisms remain unclear. RRF is essential for bacterial growth. It is not necessary for cell growth in archaea or eukaryotes, but is found in mitochondria or chloroplasts of some eukaryotic species.
Probab=24.03 E-value=5.8e+02 Score=23.57 Aligned_cols=48 Identities=23% Similarity=0.270 Sum_probs=30.6
Q ss_pred HHHHHHHhhcCeEEcCCCCCCCCCCCCCCEEEEccCCccccCCCHHHHHHHHHHHHHHHHH
Q 010008 410 ARVEKILDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFSEKEFVAIADFIHEGVEI 470 (520)
Q Consensus 410 ~~~~~~L~~~gI~v~~~~~Pg~~~~~~~~giRig~~~~tt~g~~~~d~~~la~~i~~~l~~ 470 (520)
..++..+...++-++ |-. ....|||.+|.+| +|--++++..+++..+.
T Consensus 72 ~~I~kAI~~s~l~l~----P~~----dg~~iri~iP~lT-----~E~R~~lvK~~k~~~E~ 119 (179)
T cd00520 72 KAIEKAILNSDLGLN----PNN----DGAVIRVNLPPLT-----EERRKELVKDAKKIAEE 119 (179)
T ss_pred HHHHHHHHHCCCCCC----cCc----CCCEEEecCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 557777777776553 321 1337999999877 45556666666665443
No 439
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=23.70 E-value=5.2e+02 Score=25.91 Aligned_cols=50 Identities=16% Similarity=0.241 Sum_probs=33.1
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccc
Q 010008 231 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLV 284 (520)
Q Consensus 231 ~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli 284 (520)
++.+++.... ..|.+++-++.++-. +-++|.++|+++|+.++==. ..|++
T Consensus 77 ~~~l~e~~~~-Gvk~avIis~Gf~e~-~~~~l~~~a~~~girilGPN--c~Gii 126 (286)
T TIGR01019 77 ADAIFEAIDA-GIELIVCITEGIPVH-DMLKVKRYMEESGTRLIGPN--CPGII 126 (286)
T ss_pred HHHHHHHHHC-CCCEEEEECCCCCHH-HHHHHHHHHHHcCCEEECCC--CceEE
Confidence 4566666665 777766655554322 45799999999999988433 34554
No 440
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=23.31 E-value=1.1e+02 Score=29.71 Aligned_cols=39 Identities=21% Similarity=0.367 Sum_probs=28.2
Q ss_pred CCcEEEEc-CCCCCC---CCCHHHHHHHHHHhCCEEEEechhhc
Q 010008 242 RPKLIIAG-ASAYPR---DFDYPRMRQIADAVGALLMMDMAHIS 281 (520)
Q Consensus 242 ~pklIi~~-~s~~p~---~~d~~~i~~ia~~~g~~li~D~Ah~~ 281 (520)
+++++++. .++++. +.|+..+ .|-++.|+++|.|++|+.
T Consensus 159 n~~v~lcERG~sFGYnnLV~DMrsl-~iM~~~~~PViFDaTHSv 201 (279)
T COG2877 159 NNKVILCERGASFGYNNLVVDMRSL-PIMKEFGAPVIFDATHSV 201 (279)
T ss_pred CCcEEEEeccCccCcchhHHHhhhh-HHHHHcCCCeEEecccce
Confidence 67888776 444443 5576665 467889999999999864
No 441
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.30 E-value=54 Score=35.41 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=25.2
Q ss_pred CCCCCCCCHHHHHHHHHHhCCEEEEech
Q 010008 251 SAYPRDFDYPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 251 s~~p~~~d~~~i~~ia~~~g~~li~D~A 278 (520)
|.+++..|++++++.|+++|+.||.|+.
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667788999999999999999999975
No 442
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=23.29 E-value=59 Score=29.22 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=25.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhC
Q 010008 228 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 270 (520)
Q Consensus 228 ~iD~d~le~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g 270 (520)
.-|.+.|.+.+..++|.+|.++..+-.+..-.+.+.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 3566778889999999999996533222333556667666653
No 443
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=21.42 E-value=1.2e+02 Score=29.95 Aligned_cols=71 Identities=15% Similarity=0.262 Sum_probs=45.2
Q ss_pred CHHHH-HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHhCCEEEEechhhcccccccccCCCCCccc-EEEeccCc
Q 010008 230 DYDML-EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD-VVTTTTHK 305 (520)
Q Consensus 230 D~d~l-e~~i~~~~pklIi~~~s~~p~~~d~~~i~~ia~~~g~~li~D~Ah~~gli~~~~~~~p~~~aD-iv~~S~hK 305 (520)
|+++. +..+....+..|+++....+...+++.|.++-+..++++++- +|....+.. .-+.++| ++++|.=|
T Consensus 159 ~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~~vr~~~~~PVlvG----SGvt~~Ni~-~~l~~ADG~IVGS~~K 231 (254)
T PF03437_consen 159 DLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLKRVREAVPVPVLVG----SGVTPENIA-EYLSYADGAIVGSYFK 231 (254)
T ss_pred CHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHHHHHhcCCCCEEEe----cCCCHHHHH-HHHHhCCEEEEeeeee
Confidence 45443 344455679999999888877888998888888778888863 354432211 1123577 45555445
No 444
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=21.25 E-value=77 Score=25.40 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhCCEEEEech
Q 010008 259 YPRMRQIADAVGALLMMDMA 278 (520)
Q Consensus 259 ~~~i~~ia~~~g~~li~D~A 278 (520)
-++|+++|+++|++++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999964
No 445
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=20.24 E-value=4.5e+02 Score=26.01 Aligned_cols=49 Identities=24% Similarity=0.405 Sum_probs=35.5
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCC-CCC-C----CC----CHHHHHHHHHHhCCEEEEe
Q 010008 227 GLVDYDMLEKTAILFRPKLIIAGAS-AYP-R----DF----DYPRMRQIADAVGALLMMD 276 (520)
Q Consensus 227 ~~iD~d~le~~i~~~~pklIi~~~s-~~p-~----~~----d~~~i~~ia~~~g~~li~D 276 (520)
|.+.-+.++-+++. +|.+++++.| .|- + .. -++-|.+|+.+.+..|++|
T Consensus 187 Gp~~~~~l~~i~e~-~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViD 245 (304)
T COG2248 187 GPINDEALEFILEK-RPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVID 245 (304)
T ss_pred CCCccHHHHHHHhc-CCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcceEEEe
Confidence 56777788877776 9999999854 422 1 12 2556778888888999998
Done!