BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010013
(520 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/452 (39%), Positives = 260/452 (57%), Gaps = 19/452 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K T Q+ A K IS R++ + D E + REVQ++ L H NI++
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 90
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ L+ ++ GGELFD II++ +SE AA + RQ+++ + Y H ++HR
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S ++D+ ++ DFGLS F+ KD +G+AYY+APEVL Y + D+
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 210
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILLSG PPF G E I + +G F W +S SAKD+++KML P
Sbjct: 211 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 270
Query: 313 KERLSAAEVLNHPWMRV---DGDASDKP-LDIAVLTRMKQFRAMNKLKKVALKVIAENL- 367
R+SA + L+H W++ + + D P LD A+L ++QF+ KL + AL + L
Sbjct: 271 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLT 329
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLS-------ESEVRQLME 416
S++E L +F MD + G + EL G +L G S E EV Q+++
Sbjct: 330 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 389
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
A D D NG I+Y EF+T M + E L +AF FD DNSG I+ EL ++
Sbjct: 390 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 449
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
D++T K +++EVD +NDG ++++EF M+ K
Sbjct: 450 -DSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 309 bits (791), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/452 (39%), Positives = 260/452 (57%), Gaps = 19/452 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K T Q+ A K IS R++ + D E + REVQ++ L H NI++
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 113
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ L+ ++ GGELFD II++ +SE AA + RQ+++ + Y H ++HR
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 173
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S ++D+ ++ DFGLS F+ KD +G+AYY+APEVL Y + D+
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 233
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILLSG PPF G E I + +G F W +S SAKD+++KML P
Sbjct: 234 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 293
Query: 313 KERLSAAEVLNHPWMRV---DGDASDKP-LDIAVLTRMKQFRAMNKLKKVALKVIAENL- 367
R+SA + L+H W++ + + D P LD A+L ++QF+ KL + AL + L
Sbjct: 294 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLT 352
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLS-------ESEVRQLME 416
S++E L +F MD + G + EL G +L G S E EV Q+++
Sbjct: 353 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 412
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
A D D NG I+Y EF+T M + E L +AF FD DNSG I+ EL ++
Sbjct: 413 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 472
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
D++T K +++EVD +NDG ++++EF M+ K
Sbjct: 473 -DSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 309 bits (791), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/452 (39%), Positives = 260/452 (57%), Gaps = 19/452 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K T Q+ A K IS R++ + D E + REVQ++ L H NI++
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 114
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ L+ ++ GGELFD II++ +SE AA + RQ+++ + Y H ++HR
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 174
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S ++D+ ++ DFGLS F+ KD +G+AYY+APEVL Y + D+
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 234
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILLSG PPF G E I + +G F W +S SAKD+++KML P
Sbjct: 235 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 294
Query: 313 KERLSAAEVLNHPWMRV---DGDASDKP-LDIAVLTRMKQFRAMNKLKKVALKVIAENL- 367
R+SA + L+H W++ + + D P LD A+L ++QF+ KL + AL + L
Sbjct: 295 SMRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYMGSKLT 353
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLS-------ESEVRQLME 416
S++E L +F MD + G + EL G +L G S E EV Q+++
Sbjct: 354 SQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLD 413
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
A D D NG I+Y EF+T M + E L +AF FD DNSG I+ EL ++
Sbjct: 414 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV 473
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
D++T K +++EVD +NDG ++++EF M+ K
Sbjct: 474 -DSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 297 bits (761), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 257/460 (55%), Gaps = 23/460 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K T Q+ A K IS R++ + D E + REVQ++ L H NI +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXK 90
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ L+ ++ GGELFD II++ +SE AA + RQ+++ + Y H ++HR
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHR 150
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S ++D+ ++ DFGLS F+ KD +G+AYY+APEVL Y + D+
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDV 210
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILLSG PPF G E I + +G F W +S SAKD+++K L P
Sbjct: 211 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVP 270
Query: 313 KERLSAAEVLNHPWMRV---DGDASDKP-LDIAVLTRMKQFRAMNKLKKVALKVIAENL- 367
R+SA + L+H W++ + + D P LD A+L ++QF+ KL + AL L
Sbjct: 271 SXRISARDALDHEWIQTYTKEQISVDVPSLDNAILN-IRQFQGTQKLAQAALLYXGSKLT 329
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLS-------ESEVRQLME 416
S++E L +F D + G + EL G +L G S E EV Q+++
Sbjct: 330 SQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLD 389
Query: 417 AADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNM 476
A D D NG I+Y EF+T + E L +AF FD DNSG I+ EL ++
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDV 449
Query: 477 GDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGN 516
D++T K +++EVD +NDG ++++EF + K + GN
Sbjct: 450 -DSETWKSVLSEVDKNNDGEVDFDEFQQXLLK----LCGN 484
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 297 bits (761), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 264/449 (58%), Gaps = 16/449 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++LG G +G L K T + A K I + ++ + EV ++ L H NI++
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIR-KTSVSTSSNSKLLEEVAVLK-LLDHPNIMK 100
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ + L+M+ GGELFD II + ++E AA + +Q+++ V Y H ++HR
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S +D+ +K DFGLS F+ K+ +G+AYY+APEVLR+ Y + D+
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDV 220
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVIL+ILL+G PPF G+T+Q I + +G F S W N+S AKD++K+ML D
Sbjct: 221 WSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDS 280
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPLDIAVLT----RMKQFRAMNKLKKVALKVIAENL- 367
+ R+SA + L HPW++ + +++ L M++F+ KL + AL +A L
Sbjct: 281 QRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLT 340
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL-GTRLS-------ESEVRQLMEAAD 419
S+EE L ++F+ +D + G + +EL G KL G ++ ESEV ++ AAD
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 420 VDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDA 479
D NG IDY EF+T M + ++ L AF+ FD+D +G I+++EL ++ ++
Sbjct: 401 FDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGLDHL-ES 459
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
KT KE+I+ +D +NDG +++EEF M++K
Sbjct: 460 KTWKEMISGIDSNNDGDVDFEEFCKMIQK 488
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 170/454 (37%), Positives = 252/454 (55%), Gaps = 22/454 (4%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++LG G +G L K T + A K I + + + EV ++ L H NI++
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 68
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ + L+M++ GGELFD II + +SE AA + +Q+++ Y H ++HR
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 128
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S + D+ +K DFGLS F+ G K+ +G+AYY+APEVLR+ Y + D+
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 188
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILL G PPF G+T+Q I + +G F W +S AK +VK ML +P
Sbjct: 189 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 248
Query: 313 KERLSAAEVLNHPWMRVDGDASDKPLDI------AVLTRMKQFRAMNKLKKVALKVIAEN 366
+R+SA E LNHPW + S K D+ L MK+F++ KL + A+ +
Sbjct: 249 SKRISAEEALNHPW--IVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSK 306
Query: 367 LSE-EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKL----GTRLS-------ESEVRQL 414
L+ EE L ++F+ +D + G + +EL G KL G +S E+EV +
Sbjct: 307 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHI 366
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
+++ D D NG I+Y EF+T M + E L AF+ FD D SG IT EEL
Sbjct: 367 LQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVT 426
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ D +T +++ E D +NDG +++EEF MM+K
Sbjct: 427 EVDD-ETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/457 (36%), Positives = 256/457 (56%), Gaps = 30/457 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG + T+Q++A K I+ N+D + REV+++ L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKL-DHPNIMKLF 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
ED S ++ +L GGELFD II + +SE AA + +Q+ + + Y H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWS 254
KPEN L S +D +K DFGLS F+ KD +G+AYY+APEVLR Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
AGVILYILLSG PPF+G+ E I + G F W IS AKD+++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 315 RLSAAEVLNHPWMRVDGDA----SDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSE- 369
R++A + L HPW++ SD P + +T ++QF+A KL + AL +A L+
Sbjct: 268 RITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTL 327
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLS---------------ESEVRQL 414
+E L E+F+ +DT+N G + +EL G + RL E ++ L
Sbjct: 328 DETKQLTEIFRKLDTNNDGMLDRDELVRGYHEF-MRLKGVDSNSLIQNEGSTIEDQIDSL 386
Query: 415 MEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY 474
M D+DG+G+I+Y EFI + + + E + +AF+ FDKD SG I+ +EL K +
Sbjct: 387 MPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKEL---FKLF 443
Query: 475 NMGDA----KTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ D+ + ++ II +VD + DG +++ EF M++
Sbjct: 444 SQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
++ FK D D SG I+ +EL + + + E+ ++E D + +G +D+ EF+
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 435 TMHMNRVE 442
+ R E
Sbjct: 479 LQNFVRNE 486
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 247/463 (53%), Gaps = 24/463 (5%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN---RDDV-------EDVRRE 117
+Y R+LG G +G L K+ + A K I + DD E++ E
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+ ++ L H NI++L +ED+ L+ + GGELF++II + + E AAN+ +Q+
Sbjct: 97 ISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
++ + Y H ++HRD+KPEN L + +K DFGLS FF +D +G+AYY+
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 238 APEVLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
APEVL++ Y + D+WS GVI+YILL G PPF G+ +Q I + +G F + W NIS
Sbjct: 216 APEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRV---DGDASDKPLDIAVLTRMKQFRAMNK 354
AK+++K ML D +R +A E LN W++ + + SD+ L+ M++F K
Sbjct: 276 DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQK 335
Query: 355 LKKVALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEELKAG---LPKLGTRLS--- 407
L + A+ I L+ EE L ++FK +D + G + +EL G L L
Sbjct: 336 LAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELK 395
Query: 408 --ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITME 465
E EV +++ D D NG I+Y EFI+ M + EE L +AF FD D SG IT E
Sbjct: 396 NVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKE 455
Query: 466 ELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
EL + ++ + KT +++ E D + D I+++EF +MM K
Sbjct: 456 ELANLFGLTSISE-KTWNDVLGEADQNKDNMIDFDEFVSMMHK 497
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 175/299 (58%), Gaps = 5/299 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ + L ++ + E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIA 68
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL ++ Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD ++ ++ DP++R + + L HPW+ D A DK + +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD-TALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 174/299 (58%), Gaps = 5/299 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ L ++ + E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIA 68
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL ++ Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD ++ ++ DP++R + + L HPW+ D A DK + +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 174/299 (58%), Gaps = 5/299 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ L ++ + E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIA 68
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL ++ Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKK 357
SAKD ++ ++ DP++R + + L HPW+ D A DK + +V ++K+ A +K K+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 162/275 (58%), Gaps = 4/275 (1%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D+ Y +GRG +G + K T+ + A K I + +DV+ ++E++IM
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 79
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L H NI+ L +ED + L+M+LC GGELF+R++ K + E AA + + +++ V Y
Sbjct: 80 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CH + V HRDLKPENFLF + + DSPLK DFGL+ FKPG + + VG+ YYV+P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
YG E D WSAGV++Y+LL G PPF T+ + I G F W N+S A+ +
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++++L PK+R+++ + L H W +S + L
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 293
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 162/275 (58%), Gaps = 4/275 (1%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D+ Y +GRG +G + K T+ + A K I + +DV+ ++E++IM
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKS 62
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
L H NI+ L +ED + L+M+LC GGELF+R++ K + E AA + + +++ V Y
Sbjct: 63 L-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CH + V HRDLKPENFLF + + DSPLK DFGL+ FKPG + + VG+ YYV+P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
YG E D WSAGV++Y+LL G PPF T+ + I G F W N+S A+ +
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++++L PK+R+++ + L H W +S + L
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 174/300 (58%), Gaps = 5/300 (1%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED++ + F LG G F L K T + FA K I + L ++ + E+
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIA 72
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++ + H NIV L+ YE + + L+M L +GGELFDRI+ KG Y+E+ A+ L RQ++
Sbjct: 73 VLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V+Y H MG++HRDLKPEN L+ S E+S + +DFGLS GDV G+ YVAP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL ++ Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
SAKD ++ ++ DP +R + + HPW+ D A +K + +V ++++ A +K ++
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIAGD-TALNKNIHESVSAQIRKNFAKSKWRQA 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 158/256 (61%), Gaps = 1/256 (0%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G FG L K T Q+ A K IS R++ + D E + REVQ++ L H NI++
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMK 96
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ L+ ++ GGELFD II++ +SE AA + RQ+++ + Y H ++HR
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S ++D+ ++ DFGLS F+ KD +G+AYY+APEVL Y + D+
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDV 216
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILLSG PPF G E I + +G F W +S SAKD+++KML P
Sbjct: 217 WSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP 276
Query: 313 KERLSAAEVLNHPWMR 328
R+SA + L+H W++
Sbjct: 277 SMRISARDALDHEWIQ 292
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 162/281 (57%), Gaps = 9/281 (3%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K ED+R+ Y F LG G F L K T++ A K I+ L ++ + E+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIA 68
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
++H + H NIV L YE + LIM L +GGELFDRI+ KG Y+ER A+ L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H +G++HRDLKPEN L+ S EDS + +DFGLS PG V G+ YVAP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 240 EVL-RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EVL ++ Y D WS GVI YILL G PPF+ E + +F+ IL+ +F S W +IS
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
SAKD ++ ++ DP++R + + L HPW+ A D LD
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWI-----AGDTALD 283
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 180/295 (61%), Gaps = 10/295 (3%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG + Y K T++ +A K + +K +++ + VR E+ ++ L+ H NI++L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVL--KKTVDK---KIVRTEIGVLLRLS-HPNIIKL 113
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
K +E ++L+++L GGELFDRI+ KG+YSER AA+ +Q++ V Y H G++HRD
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
LKPEN L+++ A D+PLK DFGLS + + K + G+ Y APE+LR YG E D+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDM 233
Query: 253 WSAGVILYILLSGVPPFWGET-EQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
WS G+I YILL G PF+ E +Q +F IL F S W +S +AKD+V+K++ D
Sbjct: 234 WSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD 293
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
PK+RL+ + L HPW V G A++ ++++F A KLK V+A +
Sbjct: 294 PKKRLTTFQALQHPW--VTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 152/254 (59%), Gaps = 2/254 (0%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG + T+Q++A K I+ N+D + REV+++ L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKL-DHPNIMKLF 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
ED S ++ +L GGELFD II + +SE AA + +Q+ + + Y H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWS 254
KPEN L S +D +K DFGLS F+ KD +G+AYY+APEVLR Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
AGVILYILLSG PPF+G+ E I + G F W IS AKD+++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 315 RLSAAEVLNHPWMR 328
R++A + L HPW++
Sbjct: 268 RITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 152/254 (59%), Gaps = 2/254 (0%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG + T+Q++A K I+ N+D + REV+++ L H NI++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKD-TSTILREVELLKKL-DHPNIMKLF 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
ED S ++ +L GGELFD II + +SE AA + +Q+ + + Y H ++HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADIWS 254
KPEN L S +D +K DFGLS F+ KD +G+AYY+APEVLR Y + D+WS
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWS 207
Query: 255 AGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
AGVILYILLSG PPF+G+ E I + G F W IS AKD+++KML P
Sbjct: 208 AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 315 RLSAAEVLNHPWMR 328
R++A + L HPW++
Sbjct: 268 RITATQCLEHPWIQ 281
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 153/255 (60%), Gaps = 1/255 (0%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
++LG G +G L K T + A K I + + + EV ++ L H NI++
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 85
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +ED+ + L+M++ GGELFD II + +SE AA + +Q+++ Y H ++HR
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHR 145
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEADI 252
DLKPEN L S + D+ +K DFGLS F+ G K+ +G+AYY+APEVLR+ Y + D+
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDV 205
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVILYILL G PPF G+T+Q I + +G F W +S AK +VK ML +P
Sbjct: 206 WSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEP 265
Query: 313 KERLSAAEVLNHPWM 327
+R+SA E LNHPW+
Sbjct: 266 SKRISAEEALNHPWI 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 161/272 (59%), Gaps = 8/272 (2%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
++R T+IF LG G F +LV + T + FA K I +E+ E+ ++
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKK 62
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ H NIV L+ YE L+M L +GGELFDRI+ +G Y+E+ A+ + +Q+++ V Y
Sbjct: 63 IK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL- 242
H G++HRDLKPEN L+ + E+S + TDFGLS + G + G+ YVAPEVL
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLA 180
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
++ Y D WS GVI YILL G PPF+ ETE +F+ I G+ +F S W +IS SAKD
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDAS 334
+ +L DP ER + + L+HPW +DG+ +
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPW--IDGNTA 270
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 168/293 (57%), Gaps = 4/293 (1%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
++ Y ELG+G F V Q++A K I+++KL RD + + RE +I L
Sbjct: 21 QSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH-QKLEREARICR-LL 78
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
H NIV L + + LI DL GGELF+ I+A+ +YSE A++ +Q++ V +CH
Sbjct: 79 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRR 244
MGV+HRDLKPEN L +S + + +K DFGL++ + + G+ Y++PEVLR+
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK 198
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ YG D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKD+
Sbjct: 199 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 258
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
+ KML +P +R++AAE L HPW+ + + +K+F A KLK
Sbjct: 259 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 178/318 (55%), Gaps = 9/318 (2%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ELG+G F V T Q++A K I+++KL RD + + RE +I L H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHP 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH G
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRRN- 245
++HRDLKPEN L +S ++ + +K DFGL++ + GD + G+ Y++PEVLR++
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
YG D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKD++
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAE 365
KML +P +R++A+E L HPW+ + + +K+F A KLK L +
Sbjct: 243 KMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM-- 300
Query: 366 NLSEEEIMGLKEMFKSMD 383
L+ K + K D
Sbjct: 301 -LATRNFSAAKSLLKKPD 317
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 171/305 (56%), Gaps = 5/305 (1%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I L
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQ- 86
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ + YCHS
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL+++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK ++
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALK--VI 363
ML +PK+R++A + L PW+ + + +K+F A KLK L +
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIA 326
Query: 364 AENLS 368
NLS
Sbjct: 327 TRNLS 331
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 177/317 (55%), Gaps = 8/317 (2%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ELG+G F V Q++A I+++KL RD + + RE +I L H
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH-QKLEREARICR-LLKHP 70
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L + + LI DL GGELF+ I+A+ +YSE A++ +Q++ V +CH MG
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRRN-Y 246
V+HR+LKPEN L +S + + +K DFGL++ + + G+ Y++PEVLR++ Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKD++ K
Sbjct: 191 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 250
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVI--A 364
ML +P +R++AAE L HPW+ + + +K+F A KLK L V+
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLAT 310
Query: 365 ENLS--EEEIMGLKEMF 379
N S ++EI+ + E
Sbjct: 311 RNFSVRKQEIIKVTEQL 327
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 207 bits (528), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 173/300 (57%), Gaps = 6/300 (2%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ELG+G F V T Q++A K I+++KL RD + + RE +I L
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICR-LLK 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V++CH
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR 244
G++HRDLKPEN L +S ++ + +K DFGL++ + GD + G+ Y++PEVLR+
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRK 180
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
+ YG D+W+ GVILYILL G PPFW E + ++ I G DF S W ++ AKD+
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 240
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVI 363
+ KML +P +R++A+E L HPW+ + + +K+F A KLK L +
Sbjct: 241 INKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 156/262 (59%), Gaps = 3/262 (1%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I L
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQ- 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ + YCHS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL+++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK ++
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 306 KMLHADPKERLSAAEVLNHPWM 327
ML +PK+R++A + L PW+
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 156/262 (59%), Gaps = 3/262 (1%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I L
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQ- 62
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ + YCHS
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL+++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK ++
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 306 KMLHADPKERLSAAEVLNHPWM 327
ML +PK+R++A + L PW+
Sbjct: 243 SMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 156/262 (59%), Gaps = 3/262 (1%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ELG+G F V HK T +FA K I+++KL RD + + RE +I L
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQ- 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + ++ L+ DL GGELF+ I+A+ YSE A++ +Q++ + YCHS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN- 245
G++HR+LKPEN L +S A+ + +K DFGL++ + + G+ Y++PEVL+++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
Y DIW+ GVILYILL G PPFW E + ++ I G D+ S W ++ AK ++
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 306 KMLHADPKERLSAAEVLNHPWM 327
ML +PK+R++A + L PW+
Sbjct: 244 SMLTVNPKKRITADQALKVPWI 265
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 167/293 (56%), Gaps = 6/293 (2%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ Y ++G+G F V T ++A K I+++KL RD + + RE +I L
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICR-LLK 61
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H NIV L + + L+ DL GGELF+ I+A+ +YSE A++ +Q++ V +CH
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRR 244
MGV+HRDLKPEN L +S + + +K DFGL++ + GD + G+ Y++PEVLR+
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GDQQAWFGFAGTPGYLSPEVLRK 180
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
YG DIW+ GVILYILL G PPFW E + ++ I G DF S W ++ AK++
Sbjct: 181 EAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 240
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLK 356
+ +ML +P +R++A E L HPW+ + + +K+F A KLK
Sbjct: 241 INQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 173/310 (55%), Gaps = 25/310 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI-AVLTRMKQFRA 351
+ N S+ AKD ++++L DPK+R++ + L HPW+ KP D L+R
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI--------KPKDTQQALSRKASAVN 292
Query: 352 MNKLKKVALK 361
M K KK A +
Sbjct: 293 MEKFKKFAAR 302
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 169/304 (55%), Gaps = 6/304 (1%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ELG+G F V K Q++A K I+++KL RD + + RE +I L H
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH-QKLEREARICR-LLKHP 90
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV L + + L+ DL GGELF+ I+A+ +YSE A++ Q++ V++ H
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHD 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVLRRN-Y 246
++HRDLKPEN L +S + + +K DFGL++ + + G+ Y++PEVLR++ Y
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPY 210
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G DIW+ GVILYILL G PPFW E + ++ I G DF S W ++ AK+++ +
Sbjct: 211 GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQ 270
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALK--VIA 364
ML +P +R++A + L HPW+ + + +++F A KLK L +++
Sbjct: 271 MLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVS 330
Query: 365 ENLS 368
N S
Sbjct: 331 RNFS 334
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 197 bits (500), Expect = 2e-50, Method: Composition-based stats.
Identities = 99/164 (60%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 347 KQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRL 406
KQF A NK KK AL+VIAE+LSEEEI GLKE F +D D SG ITFEELKAGL ++G L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 407 SESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEE 466
ESE+ L +AADVD +GTIDY EFI AT+H+N++ERE+HL+ AF YFDKD SGYIT +E
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120
Query: 467 LEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
L+ A +++ + D + I+E+ +VD DNDGRI+Y EF A +KG+
Sbjct: 121 LQQACEEFGVEDVR-IEELXRDVDQDNDGRIDYNEFVAXXQKGS 163
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 161/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
EDV + Y G ELG GQF + K T +++A K I SSR+ ++R+++E R
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H NI+ L +E++ V LI++L +GGELFD + K +E A +Q
Sbjct: 65 EVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ VHY HS + H DLKPEN + +P +K DFG++ + G+ FK++ G+
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF GET+Q I + DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEY 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S AKD ++++L DPK R+ A+ L H W++
Sbjct: 242 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 174/308 (56%), Gaps = 10/308 (3%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHHL 124
+ Y +G+G F V +++T QQFA K + K + + ED++RE I H L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTV 180
H +IVEL Y + ++ + G +L I+ + YSE A++ RQ++
Sbjct: 84 K-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAP 239
+ YCH ++HRD+KPEN L +S +P+K DFG+++ + G V VG+ +++AP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EV++R YG D+W GVIL+ILLSG PF+G T++ +F+ I++G + W +IS
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
SAKD+V++ML DP ER++ E LNHPW++ + K + ++++F A KLK
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 321
Query: 359 ALKVIAEN 366
L ++ +
Sbjct: 322 VLAAVSSH 329
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 62
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 182 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 240 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 62
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 182 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 239
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 240 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 162/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG G+F V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 161/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG GQF V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI +L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 160/274 (58%), Gaps = 16/274 (5%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRREV 118
V + Y G ELG GQF + K T +++A K I SSR+ ++R+++E REV
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE---REV 59
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
I+ + H NI+ L +E++ V LI++L +GGELFD + K +E A +Q++
Sbjct: 60 NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYV 237
VHY HS + H DLKPEN + +P +K DFG++ + G+ FK++ G+ +V
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178
Query: 238 APEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP 294
APE++ NY G EAD+WS GVI YILLSG PF GET+Q I + DF + +
Sbjct: 179 APEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFS 236
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
N S AKD ++++L DPK R++ A+ L H W++
Sbjct: 237 NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 161/276 (58%), Gaps = 16/276 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
E+V + Y G ELG G F V K T Q+A K I SSR+ ++R+D+E R
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE---R 63
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE++ V LI++L AGGELFD + K +E A +Q
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y HS+ + H DLKPEN + P +K DFGL+ G+ FK++ G+
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q + + +F +
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ N S+ AKD ++++L DPK+R++ + L HPW++
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 157/271 (57%), Gaps = 10/271 (3%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN-RDDV--EDVRREVQIM 121
V + Y G ELG GQF + K T +++A K I R+L + R V E++ REV I+
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
+ H NI+ L +E++ V LI++L +GGELFD + K +E A +Q++ V
Sbjct: 84 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
HY HS + H DLKPEN + +P +K DFG++ + G+ FK++ G+ +VAPE
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 241 VLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
++ NY G EAD+WS GVI YILLSG PF GET+Q I + DF + + N S
Sbjct: 203 IV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 260
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
AKD ++++L DPK R+ A+ L H W++
Sbjct: 261 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 10/308 (3%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHHL 124
+ Y +G+G F V +++T QQFA K + K + + ED++RE I H L
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTV 180
H +IVEL Y + ++ + G +L I+ + YSE A++ RQ++
Sbjct: 86 K-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAP 239
+ YCH ++HRD+KP L +S +P+K FG+++ + G V VG+ +++AP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EV++R YG D+W GVIL+ILLSG PF+G T++ +F+ I++G + W +IS
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
SAKD+V++ML DP ER++ E LNHPW++ + K + ++++F A KLK
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 323
Query: 359 ALKVIAEN 366
L ++ +
Sbjct: 324 VLAAVSSH 331
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 171/308 (55%), Gaps = 10/308 (3%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV--EDVRREVQIMHHL 124
+ Y +G+G F V +++T QQFA K + K + + ED++RE I H L
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQMVTV 180
H +IVEL Y + ++ + G +L I+ + YSE A++ RQ++
Sbjct: 84 K-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAP 239
+ YCH ++HRD+KP L +S +P+K FG+++ + G V VG+ +++AP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 240 EVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS 298
EV++R YG D+W GVIL+ILLSG PF+G T++ +F+ I++G + W +IS
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKV 358
SAKD+V++ML DP ER++ E LNHPW++ + K + ++++F A KLK
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGA 321
Query: 359 ALKVIAEN 366
L ++ +
Sbjct: 322 VLAAVSSH 329
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/145 (62%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIK 483
GTIDY EFI AT+H+N++EREE+L AF YFDKD SGYIT++E++ A K + + D I
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIH-ID 119
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
++I E+D DNDG+I+Y EFAAMMRK
Sbjct: 120 DMIKEIDQDNDGQIDYGEFAAMMRK 144
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 163/268 (60%), Gaps = 8/268 (2%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+ + +IF R+LG G FG +LV + + + K+I+ + ++ +E + E++++ L
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSL 77
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRII---AKGH-YSERAAANLCRQMVTV 180
H NI+++ +ED H++ ++M+ C GGEL +RI+ A+G SE A L +QM+
Sbjct: 78 -DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ Y HS V+H+DLKPEN LF ++ SP+K DFGL+ FK + + G+A Y+APE
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 241 VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
V +R+ + DIWSAGV++Y LL+G PF G + + + +++ + P ++ A
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQA 255
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWMR 328
D++K+ML DP+ R SAA+VL+H W +
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 157/275 (57%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ ++R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ + S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 157/275 (57%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ ++R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ + S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 156/275 (56%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ ++R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 151/265 (56%), Gaps = 15/265 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVR----REVQIMHHLTGHRN 129
+GRG V H+ T +FA K + + + ++ + +E+VR RE I+ + GH +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
I+ L +YE + L+ DL GELFD + K SE+ ++ R ++ V + H+ +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN---- 245
+HRDLKPEN L + + ++ +DFG S +PG+ ++L G+ Y+APE+L+ +
Sbjct: 222 VHRDLKPENILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
YG E D+W+ GVIL+ LL+G PPFW + + I+ G FSS W + SS+ KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++ ++L DP+ RL+A + L HP+
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 157/275 (57%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ ++R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ + S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 156/275 (56%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ ++R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H N++ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A K IS RK D +V E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 68 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 290
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A K IS RK D +V E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 68 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 290
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A K IS RK D +V E++
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 67 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 289
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A K IS RK D +V E++
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 68 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 290
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 155/275 (56%), Gaps = 16/275 (5%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSI------SSRKLINRDDVEDVRR 116
+ V + Y G ELG GQF + K T ++A K I +SR+ + R+++E R
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIE---R 64
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
EV I+ + H NI+ L YE+R V LI++L +GGELFD + K SE A + +Q
Sbjct: 65 EVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSP-LKATDFGLSVFFKPGDVFKDLVGSAY 235
++ V+Y H+ + H DLKPEN + P +K DFGL+ + G FK++ G+
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 236 YVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
+VAPE++ NY G EAD+WS GVI YILLSG PF G+T+Q I DF +
Sbjct: 184 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEF 241
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ S AKD ++K+L + ++RL+ E L HPW+
Sbjct: 242 FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A K IS RK D +V E++
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 74 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 296
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 16/267 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVR----REVQIMHHLTGHR 128
LGRG V HK T +++A K I + + ++V+++R +EV I+ ++GH
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI++LK YE L+ DL GELFD + K SE+ + R ++ V+ H +
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--- 245
++HRDLKPEN L +D +K TDFG S PG+ +++ G+ Y+APE++ +
Sbjct: 132 IVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 246 ----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
YG E D+WS GVI+Y LL+G PPFW + + I+ G+ F S W + S + K
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
D+V + L P++R +A E L HP+ +
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 148/267 (55%), Gaps = 16/267 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVR----REVQIMHHLTGHR 128
LGRG V HK T +++A K I + + ++V+++R +EV I+ ++GH
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI++LK YE L+ DL GELFD + K SE+ + R ++ V+ H +
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--- 245
++HRDLKPEN L +D +K TDFG S PG+ +++ G+ Y+APE++ +
Sbjct: 145 IVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 246 ----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
YG E D+WS GVI+Y LL+G PPFW + + I+ G+ F S W + S + K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
D+V + L P++R +A E L HP+ +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A + IS RK D +V E++
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 207 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 429
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 27/305 (8%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G F + HK + Q FA K IS R N ++E+ + GH NIV+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN------TQKEITALKLCEGHPNIVK 70
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L + D+ L+M+L GGELF+RI K H+SE A+ + R++V+ V + H +GV+HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD--VFKDLVGSAYYVAPEVLRRN-YGAE 249
DLKPEN LF+ ++ +K DFG + KP D K + +Y APE+L +N Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCFTLHYAAPELLNQNGYDES 189
Query: 250 ADIWSAGVILYILLSGVPPFWGE-------TEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
D+WS GVILY +LSG PF + I I +G F + W N+S AKD
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL---DI------AVLTRMK-QFRAM 352
+++ +L DP +RL + + + W++ S PL DI AV T +K F A
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAF 309
Query: 353 NKLKK 357
NK K+
Sbjct: 310 NKYKR 314
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 148/286 (51%), Gaps = 13/286 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLI-----NRDDVEDVRREVQ 119
+R+ YI + LG G G L + T ++ A + IS RK D +V E++
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
I+ L H I+++K + D ++++L GGELFD+++ E QM+
Sbjct: 193 ILKKL-NHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAP 239
V Y H G++HRDLKPEN L SS ED +K TDFG S + + L G+ Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 240 EVL----RRNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWP 294
EVL Y D WS GVIL+I LSG PPF T+ S+ D I G +F + W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 295 NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDI 340
+S A D+VKK+L DPK R + E L HPW++ D D K D+
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ-DEDMKRKFQDL 415
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 147/267 (55%), Gaps = 16/267 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSI--SSRKLINRDDVEDVR----REVQIMHHLTGHR 128
LGRG V HK T +++A K I + + ++V+++R +EV I+ ++GH
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI++LK YE L+ DL GELFD + K SE+ + R ++ V+ H +
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--- 245
++HRDLKPEN L +D +K TDFG S PG+ + + G+ Y+APE++ +
Sbjct: 145 IVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 246 ----YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
YG E D+WS GVI+Y LL+G PPFW + + I+ G+ F S W + S + K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
D+V + L P++R +A E L HP+ +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 144/265 (54%), Gaps = 13/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++G G + V HK T +FA K I K RD E E++I+ H
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTE----EIEILLRYGQHP 76
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ LK Y+D V ++ +L GGEL D+I+ + +SER A+ + + V Y H+ G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 189 VMHRDLKPENFLF-SSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVL-RRN 245
V+HRDLKP N L+ S ++ DFG + + + + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 246 YGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y A DIWS GV+LY +L+G PF +T + I I G S W ++S +AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+V KMLH DP +RL+AA VL HPW+
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +G G + HK T ++A K I K RD E E++I+ H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSE----EIEILLRYGQHP 81
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ LK Y+D V L+ +L GGEL D+I+ + +SER A+ + + V Y HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 189 VMHRDLKPENFLF-SSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRRN- 245
V+HRDLKP N L+ S L+ DFG + + + + +A +VAPEVL+R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 246 YGAEADIWSAGVILYILLSGVPPFW---GETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y DIWS G++LY +L+G PF +T + I I G S W +S +AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+V KMLH DP +RL+A +VL HPW+
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 141/265 (53%), Gaps = 13/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +G G + HK T ++A K I K RD E E++I+ H
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSE----EIEILLRYGQHP 81
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ LK Y+D V L+ +L GGEL D+I+ + +SER A+ + + V Y HS G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 189 VMHRDLKPENFLF-SSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVLRRN- 245
V+HRDLKP N L+ S L+ DFG + + + + +A +VAPEVL+R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 246 YGAEADIWSAGVILYILLSGVPPFW---GETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y DIWS G++LY +L+G PF +T + I I G S W +S +AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+V KMLH DP +RL+A +VL HPW+
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWV 286
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 142/265 (53%), Gaps = 13/265 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y ++G G + V HK T +FA K I K RD E E++I+ H
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK---RDPTE----EIEILLRYGQHP 76
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NI+ LK Y+D V ++ +L GGEL D+I+ + +SER A+ + + V Y H+ G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 189 VMHRDLKPENFLF-SSSAEDSPLKATDFGLSVFFKPGD-VFKDLVGSAYYVAPEVL-RRN 245
V+HRDLKP N L+ S ++ DFG + + + + +A +VAPEVL R+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 246 YGAEADIWSAGVILYILLSGVPPFWG---ETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y A DIWS GV+LY L+G PF +T + I I G S W ++S +AKD
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
+V K LH DP +RL+AA VL HPW+
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 149/268 (55%), Gaps = 7/268 (2%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + Y ELG G FGV + K T + F K I++ +++ V+ E+ IM+ L
Sbjct: 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK---YTVKNEISIMNQL 105
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHY 183
H ++ L A+ED++ + LI++ +GGELFDRI A+ + SE N RQ + +
Sbjct: 106 H-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL- 242
H ++H D+KPEN + + + S +K DFGL+ P ++ K +A + APE++
Sbjct: 165 MHEHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
R G D+W+ GV+ Y+LLSG+ PF GE + + R +F D + ++S AKD
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVD 330
+K +L +P++RL+ + L HPW++ D
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGD 311
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 142/278 (51%), Gaps = 20/278 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G H+ T Q+ A K + D R+EV +G +IV +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGGPHIVCIL 69
Query: 135 GAYEDRH----SVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMG 188
YE+ H + +IM+ GGELF RI +G ++ER AA + R + T + + HS
Sbjct: 70 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S +D+ LK TDFG + + + + YYVAPEVL Y
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEVLGPEKYD 188
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR----GHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ T Q+I + R G F + W +S AK +
Sbjct: 189 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 248
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
++ +L DP ERL+ + +NHPW+ PL A
Sbjct: 249 IRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 286
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 142/278 (51%), Gaps = 20/278 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G H+ T Q+ A K + D R+EV +G +IV +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGGPHIVCIL 88
Query: 135 GAYEDRH----SVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMG 188
YE+ H + +IM+ GGELF RI +G ++ER AA + R + T + + HS
Sbjct: 89 DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S +D+ LK TDFG + + + + YYVAPEVL Y
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK-ETTQNALQTPCYTPYYVAPEVLGPEKYD 207
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR----GHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ T Q+I + R G F + W +S AK +
Sbjct: 208 KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQL 267
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIA 341
++ +L DP ERL+ + +NHPW+ PL A
Sbjct: 268 IRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 146/291 (50%), Gaps = 34/291 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G + +++A K I + +R V REV+ ++ G++NI+EL
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV---FREVETLYQCQGNKNILELI 77
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+ED L+ + GG + I + H++ER A+ + R + + + H+ G+ HRDL
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL--------VGSAYYVAPEVLR--- 243
KPEN L S + SP+K DF L K + + GSA Y+APEV+
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 244 ---RNYGAEADIWSAGVILYILLSGVPPFWGE---------------TEQSIFDAILRGH 285
Y D+WS GV+LYI+LSG PPF G + +F++I G
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
+F W +ISS AKD++ K+L D K+RLSAA+VL HPW V G A +K
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW--VQGQAPEK 306
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 145/255 (56%), Gaps = 7/255 (2%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G+FG + T + A K I +R + D E+V+ E+ +M+ L H N+++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQL-DHANLIQLY 152
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSMGVMHRD 193
A+E ++ + L+M+ GGELFDRII + + +E +Q+ + + H M ++H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGA-EADI 252
LKPEN L + + +K DFGL+ +KP + K G+ ++APEV+ ++ + D+
Sbjct: 213 LKPENIL-CVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS GVI Y+LLSG+ PF G+ + + IL D + + +IS AK+ + K+L +
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 313 KERLSAAEVLNHPWM 327
R+SA+E L HPW+
Sbjct: 332 SWRISASEALKHPWL 346
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 141/275 (51%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 75
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + + YYVAPEVL Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 127
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 128 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 187
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 188 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 307
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 308 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 342
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 121
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 181
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 301
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 302 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 75
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 136 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 290
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 82
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 83 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 142
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 143 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 262
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 263 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 297
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 76
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 77 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 136
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 137 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 256
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 257 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 291
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 81
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 82 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 141
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 142 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 261
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 262 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 296
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 40 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 91
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 92 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 151
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 152 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 271
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 272 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 306
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 83
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 84 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 143
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 144 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D+WS GVI+YILL G PPF+ +I I G +F + W +S K +
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 263
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R++ E +NHPW+ PL
Sbjct: 264 IRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 298
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 14/275 (5%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K +++ Y +G G F L H T + A K + L D+ ++ E++
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIE 60
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+ +L H++I +L E + + ++++ C GGELFD II++ SE + RQ+V+
Sbjct: 61 ALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVS 119
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF--KDLVGSAYYV 237
V Y HS G HRDLKPEN LF E LK DFGL K + + GS Y
Sbjct: 120 AVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 238 APEVLR-RNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APE+++ ++Y G+EAD+WS G++LY+L+ G PF + +++ I+RG D W
Sbjct: 177 APELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W-- 232
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVD 330
+S S+ ++++ML DPK+R+S +LNHPW+ D
Sbjct: 233 LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD 267
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 146/262 (55%), Gaps = 8/262 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +LGRG+FG+ + +K+ + K + K+ D V V++E+ I++ + HR
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV---KVKGTDQV-LVKKEISILN-IARHR 61
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSM 187
NI+ L ++E + +I + +G ++F+RI + +ER + Q+ + + HS
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYG 247
+ H D++PEN ++ + S +K +FG + KPGD F+ L + Y APEV + +
Sbjct: 122 NIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVV 180
Query: 248 AEA-DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
+ A D+WS G ++Y+LLSG+ PF ET Q I + I+ F + + IS A D V +
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDR 240
Query: 307 MLHADPKERLSAAEVLNHPWMR 328
+L + K R++A+E L HPW++
Sbjct: 241 LLVKERKSRMTASEALQHPWLK 262
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 7/265 (2%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + Y ELG G FGV + VT + T FA K + + + D E VR+E+Q M L
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMT---PHESDKETVRKEIQTMSVL 105
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHY 183
H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ + +
Sbjct: 106 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 164
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 165 MHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 223
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
+ G D+WS GV+ YILLSG+ PF GE + + + + IS KD
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++K+L ADP R++ + L HPW+
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 7/265 (2%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + Y ELG G FGV + VT + T FA K + + + D E VR+E+Q M L
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVL 211
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHY 183
H +V L A+ED + + +I + +GGELF+++ + SE A RQ+ + +
Sbjct: 212 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H +H DLKPEN +F++ + LK DFGL+ P K G+A + APEV
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAE 329
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
+ G D+WS GV+ YILLSG+ PF GE + + + + IS KD
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 303 IVKKMLHADPKERLSAAEVLNHPWM 327
++K+L ADP R++ + L HPW+
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 13/281 (4%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG + + GR LG+G+FG YL + +K A K + +L +RRE
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
V+I HL H NI+ L G + D V LI++ G ++ + + E+ A ++
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ YCHS V+HRD+KPEN L S+ E LK DFG SV P L G+ Y+
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPSSRRTTLCGTLDYL 177
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
PE++ R + + D+WS GV+ Y L G+PPF T Q + I R F +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FV 233
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
+ A+D++ ++L + +RL+ AEVL HPW++ + S KP
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ GS Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++KK
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
L +P +R + +++ WM V
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNV 269
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 157/319 (49%), Gaps = 52/319 (16%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL--INRDDVEDVRR 116
G + +++ Y +G+G +GV + T+ A K ++ K+ IN DVE ++
Sbjct: 18 GGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT 77
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--------------IAK 162
EV++M L H NI L YED + L+M+LC GG L D++ + K
Sbjct: 78 EVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVK 136
Query: 163 GHYS--------------------------ERAAANLCRQMVTVVHYCHSMGVMHRDLKP 196
E+ +N+ RQ+ + +HY H+ G+ HRD+KP
Sbjct: 137 TQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKP 196
Query: 197 ENFLFSSSAEDSPLKATDFGLSV-FFK--PGDVF--KDLVGSAYYVAPEVLR---RNYGA 248
ENFLFS++ + +K DFGLS F+K G+ + G+ Y+VAPEVL +YG
Sbjct: 197 ENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+ D WSAGV+L++LL G PF G + +L + F + + +S A+D++ +L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLL 315
Query: 309 HADPKERLSAAEVLNHPWM 327
+ + ER A L HPW+
Sbjct: 316 NRNVDERFDAMRALQHPWI 334
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 145/263 (55%), Gaps = 11/263 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A + I +L N ++ + REV+IM L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ + GS Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++KK
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
L +P +R + +++ WM V
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNV 269
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 13/281 (4%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
LG + + GR LG+G+FG YL + +K A K + +L +RRE
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
V+I HL H NI+ L G + D V LI++ G ++ + + E+ A ++
Sbjct: 63 VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ YCHS V+HRD+KPEN L S+ E LK DFG SV P L G+ Y+
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWSV-HAPSSRRDTLCGTLDYL 177
Query: 238 APEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI 296
PE++ R + + D+WS GV+ Y L G+PPF T Q + I R F +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPD----FV 233
Query: 297 SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
+ A+D++ ++L + +RL+ AEVL HPW++ + S KP
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN---SSKP 271
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ GS Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++KK
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
L +P +R + +++ WM V
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNV 269
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ GE++ + + E+ A ++ + YCHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 249 NPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 20/310 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
YI G LG G FG + H+ T + A K ++ +K+ + D V +RRE+Q + L H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + ++M+ +GGELFD I G E+ + L +Q+++ V YCH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
V+HRDLKPEN L + K DFGLS G+ + GS Y APEV+ R
Sbjct: 137 VVHRDLKPENVLLDAHMN---AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS+GVILY LL G PF + ++F I G F + + N S ++K
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLN--PSVISLLKH 249
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAEN 366
ML DP +R + ++ H W + D P D + + M + ALK + E
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM--------IDDEALKEVCEK 301
Query: 367 L--SEEEIMG 374
SEEE++
Sbjct: 302 FECSEEEVLS 311
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 158 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 213
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 270 NPSQRPMLREVLEHPWITAN---SSKP 293
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ GE++ + + E+ A ++ + YCHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGRMHDEKV 192
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 249 NPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 133 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 188
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 244
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 245 NPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A + I +L N ++ + REV+IM L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ GS Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++KK
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
L +P +R + +++ WM V
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNV 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV 192
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 249 NPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 144/265 (54%), Gaps = 15/265 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 66
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ GS Y APE+ + + Y
Sbjct: 127 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G E D+WS GVILY L+SG PF G+ + + + +LRG I F +S+ ++++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY------MSTDCENLL 237
Query: 305 KKMLHADPKERLSAAEVLNHPWMRV 329
KK L +P +R + +++ WM V
Sbjct: 238 KKFLILNPSKRGTLEQIMKDRWMNV 262
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 10/268 (3%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K K A K + +L +RRE++I HL H NI+
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ + DR + L+++ GEL+ + G + E+ +A ++ +HYCH V+H
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L E LK DFG SV P + + G+ Y+ PE++ + + +
Sbjct: 138 RDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+W AGV+ Y L G+PPF + I+ + F P +S +KD++ K+L
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 249
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKPL 338
P +RL V+ HPW++ + P+
Sbjct: 250 HPPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 135/268 (50%), Gaps = 10/268 (3%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K K A K + +L +RRE++I HL H NI+
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 78
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+ + DR + L+++ GEL+ + G + E+ +A ++ +HYCH V+H
Sbjct: 79 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L E LK DFG SV P + + G+ Y+ PE++ + + +
Sbjct: 139 RDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+W AGV+ Y L G+PPF + I+ + F P +S +KD++ K+L
Sbjct: 195 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRY 250
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKPL 338
P +RL V+ HPW++ + P+
Sbjct: 251 HPPQRLPLKGVMEHPWVKANSRRVLPPV 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 144/263 (54%), Gaps = 11/263 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ G+ Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++KK
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKK 246
Query: 307 MLHADPKERLSAAEVLNHPWMRV 329
L +P +R + +++ WM V
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNV 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P DL G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 247 NPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P + + GR LG+G+FG YL K +K A K + +L +RREV+I
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
HL H NI+ L G + D V LI++ G ++ + + E+ A ++
Sbjct: 62 QSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ YCHS V+HRD+KPEN L S+ E LK DFG SV P +L G+ Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPE 176
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
++ R + + D+WS GV+ Y L G PPF T Q + I R F ++
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEG 232
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
A+D++ ++L +P +R EVL HPW+ + S KP
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 158 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 213
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 214 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 269
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 270 NPSQRPMLREVLEHPWITAN---SSKP 293
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 88
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 149 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 204
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 205 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 260
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 261 NPSQRPMLREVLEHPWITAN---SSKP 284
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 192
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 249 NPSQRPMLREVLEHPWITAN---SSKP 272
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 137/264 (51%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ G LG G FG + H+ T + A K ++ +K+ + D V ++RE+Q + L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L ++M+ +GGELFD I G E A L +Q+++ V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
V+HRDLKPEN L + K DFGLS G+ +D GS Y APEV+ R
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS GVILY LL G PF E ++F I RG + + + ++ S ++
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP +R + ++ H W + D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 135/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K++K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 133/267 (49%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE + R + +
Sbjct: 137 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGRXHDEKV 192
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 193 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 248
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 249 NPSQRPXLREVLEHPWITAN---SSKP 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 247 NPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 137/278 (49%), Gaps = 13/278 (4%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P + + GR LG+G+FG YL K +K A K + +L +RREV+I
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
HL H NI+ L G + D V LI++ G ++ + + E+ A ++
Sbjct: 62 QSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE 240
+ YCHS V+HRD+KPEN L S+ E LK DFG SV P L G+ Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPE 176
Query: 241 VLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
++ R + + D+WS GV+ Y L G PPF T Q + I R F ++
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEG 232
Query: 300 AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
A+D++ ++L +P +R EVL HPW+ + S KP
Sbjct: 233 ARDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 134 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 189
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 246 NPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 19/275 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVELHWRASQCPHIVRIV 121
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++ + GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 122 DVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN 181
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RRNYG 247
+ HRD+KPEN L++S ++ LK TDFG + + + YYVAPEVL Y
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDI 303
D WS GVI YILL G PPF+ +I I G +F + W +S K +
Sbjct: 242 KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXL 301
Query: 304 VKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
++ +L +P +R + E NHPW+ PL
Sbjct: 302 IRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPL 336
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 136 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 192 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 247
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 248 NPSQRPMLREVLEHPWITAN---SSKP 271
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 133 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGRMHDEKV 188
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 189 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 244
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 245 NPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 70
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 71 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 131 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 186
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 187 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 242
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 243 NPSQRPMLREVLEHPWITAN---SSKP 266
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 146/277 (52%), Gaps = 19/277 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGH 127
YI LG G FG L TH T+Q+ A K IS R+L+ + D+ V RE+ + L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFIS-RQLLKKSDMHMRVEREISYLK-LLRH 68
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+I++L + ++++ AGGELFD I+ K +E +Q++ + YCH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRN 245
++HRDLKPEN L + +K DFGLS G+ K GS Y APEV+ +
Sbjct: 128 KIVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIF---DAILRGHIDFSSDPWPNISSSAKD 302
G E D+WS G++LY++L G PF E ++F ++ + DF +S A+
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQS 237
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
++++M+ ADP +R++ E+ PW V+ +P++
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPME 274
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 247 NPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 134/267 (50%), Gaps = 10/267 (3%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG+G+FG YL K K A K + +L +RRE++I HL H NI+
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILR 78
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+ + DR + L+++ GEL+ + G + E+ +A ++ +HYCH V+HR
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHR 138
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEAD 251
D+KPEN L E LK DFG SV P + + G+ Y+ PE++ + + + D
Sbjct: 139 DIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVD 194
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
+W AGV+ Y L G+PPF + I+ + F P +S +KD++ K+L
Sbjct: 195 LWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYH 250
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPL 338
P +RL V+ HPW++ + P+
Sbjct: 251 PPQRLPLKGVMEHPWVKANSRRVLPPV 277
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 143/261 (54%), Gaps = 11/261 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ LIM+ +GGE+FD ++A G E+ A + RQ+V+ V YCH
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G GS Y APE+ + + Y
Sbjct: 132 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++K+
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKR 244
Query: 307 MLHADPKERLSAAEVLNHPWM 327
L +P +R + +++ W+
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWI 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 132 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGRMHDEKV 187
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 243
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 244 NPSQRPMLREVLEHPWITAN---SSKP 267
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 10/262 (3%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGD 332
+P +R EVL HPW+ +
Sbjct: 247 NPSQRPMLREVLEHPWITANSS 268
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 10/262 (3%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGD 332
+P +R EVL HPW+ +
Sbjct: 247 NPSQRPMLREVLEHPWITANSS 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK +FG SV P L G+ Y+ PE++ R + +
Sbjct: 135 RDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 190
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 191 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 246
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 247 NPSQRPMLREVLEHPWITAN---SSKP 270
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
GK + + GR LG+G+FG YL K +K A K + +L +RREV
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 60
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+I HL H NI+ L G + D V LI++ G ++ + + E+ A ++
Sbjct: 61 EIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELA 119
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS V+HRD+KPEN L S+ E LK DFG S P L G+ Y+
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLP 175
Query: 239 PEVLR-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
PE++ R + + D+WS GV+ Y L G PPF T Q + I R F ++
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVT 231
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
A+D++ ++L +P +R EVL HPW+ + S KP
Sbjct: 232 EGARDLISRLLKHNPSQRPMLREVLEHPWITAN---SSKP 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 13/267 (4%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K +K A K + +L +RREV+I HL H NI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK +FG SV P L G+ Y+ PE++ R + +
Sbjct: 134 RDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 189
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 190 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 245
Query: 311 DPKERLSAAEVLNHPWMRVDGDASDKP 337
+P +R EVL HPW+ + S KP
Sbjct: 246 NPSQRPMLREVLEHPWITAN---SSKP 269
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 147/293 (50%), Gaps = 34/293 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G + T Q++A K I + R V REV++++ GHRN++EL
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV---FREVEMLYQCQGHRNVLELI 77
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+E+ L+ + GG + I + H++E A+ + + + + + + H+ G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDV-------FKDLVGSAYYVAPEVLR--- 243
KPEN L + SP+K DFGL K GD GSA Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 244 ---RNYGAEADIWSAGVILYILLSGVPPFWGE---------------TEQSIFDAILRGH 285
Y D+WS GVILYILLSG PPF G + +F++I G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+F W +IS +AKD++ K+L D K+RLSAA+VL HPW V G A + L
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW--VQGCAPENTL 308
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 10/264 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ G LG G FG + H+ T + A K ++ +K+ + D V ++RE+Q + L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L ++M+ +GGELFD I G E A L +Q+++ V YCH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
V+HRDLKPEN L + K DFGLS G+ + GS Y APEV+ R
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E DIWS GVILY LL G PF E ++F I RG + + + ++ S ++
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGGVFYIPE---YLNRSVATLLMH 244
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML DP +R + ++ H W + D
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQD 268
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 10/257 (3%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
GR LG+G+FG YL K K A K + +L +RREV+I HL H NI+
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 68
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L G + D V LI++ G ++ + + E+ A ++ + YCHS V+H
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEA 250
RD+KPEN L S+ E LK DFG SV P L G+ Y+ PE++ R + +
Sbjct: 129 RDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
D+WS GV+ Y L G PPF T Q + I R F ++ A+D++ ++L
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD----FVTEGARDLISRLLKH 240
Query: 311 DPKERLSAAEVLNHPWM 327
+P +R EVL HPW+
Sbjct: 241 NPSQRPMLREVLEHPWI 257
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 143/261 (54%), Gaps = 11/261 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ LIM+ +GGE+FD ++A G E+ A + RQ+V+ V YCH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G G+ Y APE+ + + Y
Sbjct: 135 IVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY L+SG PF G+ + + + +LRG P+ +S+ ++++K+
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI---PF-YMSTDCENLLKR 247
Query: 307 MLHADPKERLSAAEVLNHPWM 327
L +P +R + +++ W+
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWI 268
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 147/275 (53%), Gaps = 9/275 (3%)
Query: 60 KPMEDVRNTYIF-GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
+ ME+ N YI +ELGRG+F V K T Q++A K + R+ +D ++ E+
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEI 79
Query: 119 QIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQ 176
++ ++ L YE+ + LI++ AGGE+F + + SE L +Q
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ 139
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
++ V+Y H ++H DLKP+N L SS +K DFG+S ++++G+ Y
Sbjct: 140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEY 199
Query: 237 VAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
+APE+L NY D+W+ G+I Y+LL+ PF GE Q + I + ++D+S + +
Sbjct: 200 LAPEIL--NYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++S A D ++ +L +P++R +A L+H W++
Sbjct: 258 SSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G FGV L+ K + + A K I + I+ E+V+RE+ I H H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV K + ++M+ +GGELF+RI G +SE A +Q+++ V YCH+M
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNY- 246
V HRDLK EN L S LK DFG S K VG+ Y+APEV L++ Y
Sbjct: 135 VCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G AD+WS GV LY++L G PF E F + ++ ++ + +IS + ++
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 253
Query: 305 KKMLHADPKERLSAAEVLNHPWM 327
++ ADP +R+S E+ NH W
Sbjct: 254 SRIFVADPAKRISIPEIRNHEWF 276
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/293 (34%), Positives = 146/293 (49%), Gaps = 34/293 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G + T Q++A K I + R V REV++++ GHRN++EL
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRV---FREVEMLYQCQGHRNVLELI 77
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
+E+ L+ + GG + I + H++E A+ + + + + + + H+ G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDV-------FKDLVGSAYYVAPEVLR--- 243
KPEN L + SP+K DF L K GD GSA Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 244 ---RNYGAEADIWSAGVILYILLSGVPPFWGE---------------TEQSIFDAILRGH 285
Y D+WS GVILYILLSG PPF G + +F++I G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 286 IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+F W +IS +AKD++ K+L D K+RLSAA+VL HPW V G A + L
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW--VQGCAPENTL 308
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 138/263 (52%), Gaps = 10/263 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G FGV L+ K + + A K I + I+ E+V+RE+ I H H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV K + ++M+ +GGELF+RI G +SE A +Q+++ V YCH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNY- 246
V HRDLK EN L S LK FG S KD VG+ Y+APEV L++ Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G AD+WS GV LY++L G PF E F + ++ ++ + +IS + ++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 305 KKMLHADPKERLSAAEVLNHPWM 327
++ ADP +R+S E+ NH W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 134/264 (50%), Gaps = 11/264 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + LG G FG L H T Q+ A K I+ + L D + RE+ + L H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + + + ++++ AG ELFD I+ + SE+ A +Q+++ V YCH
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
++HRDLKPEN L E +K DFGLS G+ K GS Y APEV+ +
Sbjct: 134 IVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY++L PF E+ +F I G +S A ++K+
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 246
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML +P R+S E++ W +VD
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFKVD 270
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 134/264 (50%), Gaps = 11/264 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + LG G FG L H T Q+ A K I+ + L D + RE+ + L H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHP 64
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + + + ++++ AG ELFD I+ + SE+ A +Q+++ V YCH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
++HRDLKPEN L E +K DFGLS G+ K GS Y APEV+ +
Sbjct: 124 IVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY++L PF E+ +F I G +S A ++K+
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 236
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML +P R+S E++ W +VD
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVD 260
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 134/264 (50%), Gaps = 11/264 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + LG G FG L H T Q+ A K I+ + L D + RE+ + L H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + + + ++++ AG ELFD I+ + SE+ A +Q+++ V YCH
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
++HRDLKPEN L E +K DFGLS G+ K GS Y APEV+ +
Sbjct: 133 IVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY++L PF E+ +F I G +S A ++K+
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 245
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML +P R+S E++ W +VD
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFKVD 269
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 134/264 (50%), Gaps = 11/264 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + LG G FG L H T Q+ A K I+ + L D + RE+ + L H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR-LLRHP 68
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+I++L + + + ++++ AG ELFD I+ + SE+ A +Q+++ V YCH
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNY 246
++HRDLKPEN L E +K DFGLS G+ K GS Y APEV+ +
Sbjct: 128 IVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E D+WS GVILY++L PF E+ +F I G +S A ++K+
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 240
Query: 307 MLHADPKERLSAAEVLNHPWMRVD 330
ML +P R+S E++ W +VD
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVD 264
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 144/265 (54%), Gaps = 15/265 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+IM L H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKLFREVRIMKILN-HP 74
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+M+ +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L D +K DFG S F G+ GS Y APE+ + + Y
Sbjct: 135 IVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G E D+WS GVILY L+SG PF G+ + + + +LRG I F +S+ ++++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFY------MSTDCENLL 245
Query: 305 KKMLHADPKERLSAAEVLNHPWMRV 329
KK+L +P +R S +++ WM V
Sbjct: 246 KKLLVLNPIKRGSLEQIMKDRWMNV 270
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 10/263 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G FGV L+ K + + A K I + I+ E+V+RE+ I H H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV K + ++M+ +GGELF+RI G +SE A +Q+++ V YCH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNY- 246
V HRDLK EN L S LK FG S K VG+ Y+APEV L++ Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPR-LKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G AD+WS GV LY++L G PF E F + ++ ++ + +IS + ++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 305 KKMLHADPKERLSAAEVLNHPWM 327
++ ADP +R+S E+ NH W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G FGV L+ K + + A K I + I +V+RE+ I H H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----AANVKREI-INHRSLRHP 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV K + ++M+ +GGELF+RI G +SE A +Q+++ V YCH+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNY- 246
V HRDLK EN L S LK DFG S K VG+ Y+APEV L++ Y
Sbjct: 136 VCHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G AD+WS GV LY++L G PF E F + ++ ++ + +IS + ++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 305 KKMLHADPKERLSAAEVLNHPWM 327
++ ADP +R+S E+ NH W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 139/265 (52%), Gaps = 15/265 (5%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y + +G+G F L H T ++ A K I +L N ++ + REV+I L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLN-HP 73
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV+L E ++ L+ + +GGE+FD ++A G E+ A RQ+V+ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY- 246
++HRDLK EN L + D +K DFG S F G+ G+ Y APE+ + + Y
Sbjct: 134 IVHRDLKAENLLLDA---DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G E D+WS GVILY L+SG PF G+ + + + +LRG I F S+ ++++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYX------STDCENLL 244
Query: 305 KKMLHADPKERLSAAEVLNHPWMRV 329
KK L +P +R + ++ W V
Sbjct: 245 KKFLILNPSKRGTLEQIXKDRWXNV 269
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 138/274 (50%), Gaps = 10/274 (3%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L P+ + Y F +++G G FGV L+ K TK+ A K I I+ E+V+RE
Sbjct: 11 LDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQRE 66
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+ I H H NIV K + +IM+ +GGEL++RI G +SE A +Q+
Sbjct: 67 I-INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
++ V YCHSM + HRDLK EN L S LK DFG S K VG+ Y+
Sbjct: 126 LSGVSYCHSMQICHRDLKLENTLLDGSPAPR-LKICDFGYSKSSVLHSQPKSTVGTPAYI 184
Query: 238 APEV-LRRNY-GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPW 293
APEV LR+ Y G AD+WS GV LY++L G PF E + ++ + +S
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
IS ++ ++ ADP R+S E+ H W
Sbjct: 245 IRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 10/263 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G FGV L+ K + A K I + I+ E+V+RE+ I H H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREI-INHRSLRHP 75
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
NIV K + ++M+ +GGELF+RI G +SE A +Q+++ V Y H+M
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNY- 246
V HRDLK EN L S LK DFG S K VG+ Y+APEV L++ Y
Sbjct: 136 VAHRDLKLENTLLDGSPAPR-LKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAKDIV 304
G AD+WS GV LY++L G PF E F + ++ ++ + +IS + ++
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLI 254
Query: 305 KKMLHADPKERLSAAEVLNHPWM 327
++ ADP +R+S E+ NH W
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRN 129
GR LG+G+FG YL K + A K + + I ++ VE +RRE++I HL H N
Sbjct: 27 IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHL-HHPN 84
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
I+ L + DR + LI++ GEL+ + + E+ A + ++ + YCH V
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGA 248
+HRD+KPEN L E DFG SV P K + G+ Y+ PE++ R +
Sbjct: 145 IHRDIKPENLLLGLKGELK---IADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
+ D+W GV+ Y LL G PPF + + I++ + F + ++ + A+D++ K+L
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKLL 256
Query: 309 HADPKERLSAAEVLNHPWMRVDG 331
+P ERL A+V HPW+R +
Sbjct: 257 RHNPSERLPLAQVSAHPWVRANS 279
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 38/274 (13%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G + +K T+++FA K + D RREV++ + +IV +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRASQCPHIVRIV 77
Query: 135 GAYED----RHSVNLIMDLCAGGELFDRIIAKG--HYSERAAANLCRQMVTVVHYCHSMG 188
YE+ R + ++M+ GGELF RI +G ++ER A+ + + + + Y HS+
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 137
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGA 248
+ HRD+KPEN L++S ++ LK TDFG A E Y
Sbjct: 138 IAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEKYDK 177
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDA----ILRGHIDFSSDPWPNISSSAKDIV 304
D+WS GVI+YILL G PPF+ +I I G +F + W +S K ++
Sbjct: 178 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLI 237
Query: 305 KKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
+ +L +P +R++ E +NHPW+ PL
Sbjct: 238 RNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 150/283 (53%), Gaps = 17/283 (6%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+G+ +ED + G LG+G F Y T + A K I + + V+ V+ E
Sbjct: 6 IGEKIEDFK----VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCR 175
V+I H H +I+EL +ED + V L++++C GE+ +R + +SE A +
Sbjct: 62 VKI-HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFMH 119
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSA 234
Q++T + Y HS G++HRDL N L + + +K DFGL+ K P + L G+
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 235 YYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y++PE+ R+ +G E+D+WS G + Y LL G PPF +T ++ + ++ + S
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS--- 233
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
+S AKD++ ++L +P +RLS + VL+HP+M + K
Sbjct: 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 92
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L E ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 153 DLKPENLLID---EQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 207
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 263
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 264 LTKRFGNLKNGVNDIKNHKWF 284
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T FA K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T FA K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T FA K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K L G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLID---QQGYIQVTDFGFAKRVKGATW--TLCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWF 298
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ ++E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFGL+ K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMID---QQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 98
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 159 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G ++E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F T L T +++A K + R +I + V V RE +M L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 151 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ ++E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + ++ TDFGL+ K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMID---QQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 100
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 161 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 215
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 271
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWF 292
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 187 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 241
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWF 318
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 138/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + ++ TDFG + K G + L G+ Y+APE ++ + Y D
Sbjct: 166 DLKPENLIID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG G FG LV HK+T +A K + +K++ +E E +I + +V+
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++++ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + +K DFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+AP +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK+T +A K + +K++ +E E +I+ + +V+
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 98
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 159 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 213
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWF 290
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+ ++ NH W
Sbjct: 277 LTKAFGNLKNGVNDIKNHKWF 297
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 91
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 152 DLKPENLLIDQQGY---IQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 206
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 262
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWF 283
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWF 297
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 154 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 266
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
+P + + FG+ LG G F L T +++A K + R +I + V V RE
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+M L H V+L ++D + + GEL I G + E ++V+
Sbjct: 61 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 119
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYY 236
+ Y H G++HRDLKPEN L + ED ++ TDFG + P VG+A Y
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 237 VAPEVLRRNYGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
V+PE+L + +D+W+ G I+Y L++G+PPF E IF I++ DF +P
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 236
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEV 321
A+D+V+K+L D +RL E+
Sbjct: 237 ----ARDLVEKLLVLDATKRLGCEEM 258
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTW-TLCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
+P + + FG+ LG G F L T +++A K + R +I + V V RE
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+M L H V+L ++D + + GEL I G + E ++V+
Sbjct: 63 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 121
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYY 236
+ Y H G++HRDLKPEN L + ED ++ TDFG + P VG+A Y
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 237 VAPEVLRRNYGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
V+PE+L + +D+W+ G I+Y L++G+PPF E IF I++ DF +P
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 238
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEV 321
A+D+V+K+L D +RL E+
Sbjct: 239 ----ARDLVEKLLVLDATKRLGCEEM 260
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 154 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 266
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 267 EKLLVLDATKRLGCEEM 283
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 12/266 (4%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
+P + + FG+ LG G F L T +++A K + R +I + V V RE
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVT 179
+M L H V+L ++D + + GEL I G + E ++V+
Sbjct: 62 VMSRL-DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 120
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYY 236
+ Y H G++HRDLKPEN L + ED ++ TDFG + P VG+A Y
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 237 VAPEVLRRNYGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
V+PE+L + +D+W+ G I+Y L++G+PPF E IF I++ DF +P
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK 237
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEV 321
A+D+V+K+L D +RL E+
Sbjct: 238 ----ARDLVEKLLVLDATKRLGCEEM 259
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 129/260 (49%), Gaps = 18/260 (6%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP------GDVFKDLVGSAYYVAPEVL 242
++HRDLKPEN L + ED ++ TDFG + P + F VG+A YV+PE+L
Sbjct: 151 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANAF---VGTAQYVSPELL 204
Query: 243 RRNYGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----AR 260
Query: 302 DIVKKMLHADPKERLSAAEV 321
D+V+K+L D +RL E+
Sbjct: 261 DLVEKLLVLDATKRLGCEEM 280
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFF 91
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L ++D + + GEL I G + E ++V+ + Y H G++
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRNYG 247
HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 152 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 248 AE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V+K
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 264
Query: 307 MLHADPKERLSAAEV 321
+L D +RL E+
Sbjct: 265 LLVLDATKRLGCEEM 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 151 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 151 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 263
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 158 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 270
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 271 EKLLVLDATKRLGCEEM 287
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 156 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF + +P A+D+V
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARDLV 268
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 269 EKLLVLDATKRLGCEEM 285
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 67
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 128 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 240
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 241 EKLLVLDATKRLGCEEM 257
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFF 91
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L ++D + + GEL I G + E ++V+ + Y H G++
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRNYG 247
HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 152 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 248 AE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V+K
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 264
Query: 307 MLHADPKERLSAAEV 321
+L D +RL E+
Sbjct: 265 LLVLDATKRLGCEEM 279
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 137/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV HK++ +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ AGGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ +APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 136/261 (52%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 12/255 (4%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFF 76
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L ++D + + GEL I G + E ++V+ + Y H G++
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 136
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRNYG 247
HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 137 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 248 AE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V+K
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLVEK 249
Query: 307 MLHADPKERLSAAEV 321
+L D +RL E+
Sbjct: 250 LLVLDATKRLGCEEM 264
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVL-RR 244
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + GEL I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVLRRN 245
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 246 YGAE-ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + ++ TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + +K DFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F Y +T DTK+ FA K + L+ E + E+ I H +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 86
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V +++++C L + + +E A RQ + V Y H+
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNY 246
V+HRDLK N + +D +K DFGL+ + G+ KDL G+ Y+APEVL ++ +
Sbjct: 147 VIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E DIWS G ILY LL G PPF + + I + +I+ A ++++
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 259
Query: 307 MLHADPKERLSAAEVLN 323
MLHADP R S AE+L
Sbjct: 260 MLHADPTLRPSVAELLT 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 131/257 (50%), Gaps = 10/257 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F Y +T DTK+ FA K + L+ E + E+ I H +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V +++++C L + + +E A RQ + V Y H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNY 246
V+HRDLK N + +D +K DFGL+ + G+ KDL G+ Y+APEVL ++ +
Sbjct: 163 VIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E DIWS G ILY LL G PPF + + I + +I+ A ++++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 307 MLHADPKERLSAAEVLN 323
MLHADP R S AE+L
Sbjct: 276 MLHADPTLRPSVAELLT 292
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 134/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ LG G FG LV H +T +A K + +K++ +E E +I+ + + +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GGE+F + G + E A Q+V Y HS+ +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN + + +K TDFG + K G + L G+ Y+APE +L + Y D
Sbjct: 167 DLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 221
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWF 298
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+ FG+ LG G F L T +++A K + R +I + V V RE +M L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V+L ++D + + G L I G + E ++V+ + Y H G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV---FKDLVGSAYYVAPEVL-RR 244
++HRDLKPEN L + ED ++ TDFG + P VG+A YV+PE+L +
Sbjct: 153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ +D+W+ G I+Y L++G+PPF E IF I++ DF +P A+D+V
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARDLV 265
Query: 305 KKMLHADPKERLSAAEV 321
+K+L D +RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 126/262 (48%), Gaps = 16/262 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LG G FG +L+ + + +A K + ++ VE E ++M + H I+
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHPFIIR 70
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+ G ++D + +IMD GGELF + + A ++ + Y HS +++R
Sbjct: 71 MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEAD 251
DLKPEN L + +K TDFG + + DV L G+ Y+APEV+ + Y D
Sbjct: 131 DLKPENILLDKNGH---IKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTKPYNKSID 185
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
WS G+++Y +L+G PF+ ++ IL + F P + KD++ +++ D
Sbjct: 186 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRD 241
Query: 312 PKERL-----SAAEVLNHPWMR 328
+RL +V NHPW +
Sbjct: 242 LSQRLGNLQNGTEDVKNHPWFK 263
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GG++F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + +K DFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 16/261 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G FG LV H +T +A K + +K++ +E E +I+ + +V+
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L+ +++D ++ ++M+ GG++F + G +SE A Q+V Y HS+ +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-VLRRNYGAEAD 251
DLKPEN L + +K DFG + K G + L G+ Y+APE +L + Y D
Sbjct: 166 DLKPENLLID---QQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVD 220
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
W+ GV++Y + +G PPF+ + I++ I+ G + F S + SS KD+++ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 312 PKERL-----SAAEVLNHPWM 327
+R ++ NH W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 68
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 129 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 241
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 242 AGLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 66
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 127 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 239
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 240 AGLLKKDPKQRLGGGPSDAKEVMEH 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 15/265 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + +I +D+V E +++ + T
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TR 63
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK A++ + +M+ GGELF + + ++E A ++V+ + Y HS
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
V++RD+K EN + +D +K TDFGL G K G+ Y+APEVL N
Sbjct: 124 RDVVYRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W GV++Y ++ G PF+ + + +F+ IL I F +S AK ++
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLL 236
Query: 305 KKMLHADPKERLS-----AAEVLNH 324
+L DPK+RL A EV+ H
Sbjct: 237 AGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 10/257 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F Y +T DTK+ FA K + L+ E + E+ I H +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V +++++C L + + +E A RQ + V Y H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNY 246
V+HRDLK N + +D +K DFGL+ + G+ K L G+ Y+APEVL ++ +
Sbjct: 163 VIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E DIWS G ILY LL G PPF + + I + +I+ A ++++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 307 MLHADPKERLSAAEVLN 323
MLHADP R S AE+L
Sbjct: 276 MLHADPTLRPSVAELLT 292
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 10/257 (3%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ GR LG+G F Y +T DTK+ FA K + L+ E + E+ I H +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI-HKSLDNP 102
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
++V G +ED V +++++C L + + +E A RQ + V Y H+
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNY 246
V+HRDLK N + +D +K DFGL+ + G+ K L G+ Y+APEVL ++ +
Sbjct: 163 VIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
E DIWS G ILY LL G PPF + + I + +I+ A ++++
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRR 275
Query: 307 MLHADPKERLSAAEVLN 323
MLHADP R S AE+L
Sbjct: 276 MLHADPTLRPSVAELLT 292
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 144/281 (51%), Gaps = 21/281 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM--HHLTGHRNIV 131
++G G G+ + T K T +Q A K + RK R E + EV IM +H H N+V
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR---ELLFNEVVIMRDYH---HDNVV 105
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
++ +Y + ++M+ GG L D I+ +E A +C ++ + Y H+ GV+H
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAE 249
RD+K ++ L +S D +K +DFG K K LVG+ Y++APEV+ R YG E
Sbjct: 165 RDIKSDSILLTS---DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
DIWS G+++ ++ G PP++ E I R + +SS + + ML
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI-RDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 310 ADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+P +R +A E+L HP++++ G S ++ M+Q+R
Sbjct: 281 REPSQRATAQELLGHPFLKLAGPPS------CIVPLMRQYR 315
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 17/276 (6%)
Query: 58 LGKPMEDVR-NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
L KP V N + + + LG+G FG LV K T + +A K + ++ +D+V
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E +++ + + H + LK +++ + +M+ GGELF + + +SE A +
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 177 MVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSA 234
+V+ + Y HS V++RDLK EN + +D +K TDFGL K G K G+
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 235 YYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y+APEVL N YG D W GV++Y ++ G PF+ + + +F+ IL I F
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--- 370
Query: 294 PNISSSAKDIVKKMLHADPKERLS-----AAEVLNH 324
+ AK ++ +L DPK+RL A E++ H
Sbjct: 371 -TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 139/276 (50%), Gaps = 17/276 (6%)
Query: 58 LGKPMEDVR-NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR 116
L KP V N + + + LG+G FG LV K T + +A K + ++ +D+V
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
E +++ + + H + LK +++ + +M+ GGELF + + +SE A +
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 177 MVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSA 234
+V+ + Y HS V++RDLK EN + +D +K TDFGL K G K G+
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 235 YYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y+APEVL N YG D W GV++Y ++ G PF+ + + +F+ IL I F
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--- 373
Query: 294 PNISSSAKDIVKKMLHADPKERLS-----AAEVLNH 324
+ AK ++ +L DPK+RL A E++ H
Sbjct: 374 -TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 69
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 129
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 130 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 187 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 245
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 246 ENPSARITIPDIKKDRW 262
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NAMLNHENVVKFY 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 132 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 189 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 247
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 248 ENPSARITIPDIKKDRW 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 133/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G +G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 19/267 (7%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHR 128
R LG+G +G + V T +T + FA K + ++ N D + E I+ + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
IV+L A++ + LI++ +GGELF ++ +G + E A ++ + + H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN-Y 246
+++RDLKPEN + + +K TDFGL G V G+ Y+APE+L R+ +
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
D WS G ++Y +L+G PPF GE + D IL+ ++ P ++ A+D++KK
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKK 254
Query: 307 MLHADPKERLS-----AAEVLNHPWMR 328
+L + RL A EV HP+ R
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 19/267 (7%)
Query: 73 RELGRGQFGVTYLV---THKDTKQQFACKSISSRKLI-NRDDVEDVRREVQIMHHLTGHR 128
R LG+G +G + V T +T + FA K + ++ N D + E I+ + H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
IV+L A++ + LI++ +GGELF ++ +G + E A ++ + + H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN-Y 246
+++RDLKPEN + + +K TDFGL G V G+ Y+APE+L R+ +
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
D WS G ++Y +L+G PPF GE + D IL+ ++ P ++ A+D++KK
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKK 254
Query: 307 MLHADPKERLS-----AAEVLNHPWMR 328
+L + RL A EV HP+ R
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 16/266 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + ++ +D+V E +++ + +
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SR 68
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK +++ + +M+ GGELF + + +SE A ++V+ + Y HS
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 187 -MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR 244
V++RDLK EN + +D +K TDFGL K G K G+ Y+APEVL
Sbjct: 129 EKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
N YG D W GV++Y ++ G PF+ + + +F+ IL I F + AK +
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 241
Query: 304 VKKMLHADPKERLS-----AAEVLNH 324
+ +L DPK+RL A E++ H
Sbjct: 242 LSGLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 16/266 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + ++ +D+V E +++ + +
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SR 67
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK +++ + +M+ GGELF + + +SE A ++V+ + Y HS
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 187 -MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR 244
V++RDLK EN + +D +K TDFGL K G K G+ Y+APEVL
Sbjct: 128 EKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 184
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
N YG D W GV++Y ++ G PF+ + + +F+ IL I F + AK +
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 240
Query: 304 VKKMLHADPKERLS-----AAEVLNH 324
+ +L DPK+RL A E++ H
Sbjct: 241 LSGLLKKDPKQRLGGGSEDAKEIMQH 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 16/266 (6%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + + + LG+G FG LV K T + +A K + ++ +D+V E +++ + +
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SR 66
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + LK +++ + +M+ GGELF + + +SE A ++V+ + Y HS
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 187 -MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR 244
V++RDLK EN + +D +K TDFGL K G K G+ Y+APEVL
Sbjct: 127 EKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 245 N-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
N YG D W GV++Y ++ G PF+ + + +F+ IL I F + AK +
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 239
Query: 304 VKKMLHADPKERLS-----AAEVLNH 324
+ +L DPK+RL A E++ H
Sbjct: 240 LSGLLKKDPKQRLGGGSEDAKEIMQH 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 23/266 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ L K + +Q A K + RK R E + EV IM H N+VE+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR---ELLFNEVVIMRDYQ-HFNVVEM 107
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+++ +E A +C ++ + Y H+ GV+HRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN-YGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APEV+ R+ Y E D
Sbjct: 167 IKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK------DIVK 305
IWS G+++ ++ G PP++ D+ ++ P P + +S K D ++
Sbjct: 224 IWSLGIMVIEMVDGEPPYFS-------DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 306 KMLHADPKERLSAAEVLNHPWMRVDG 331
+ML DP+ER +A E+L+HP++ G
Sbjct: 277 RMLVRDPQERATAQELLDHPFLLQTG 302
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 12/257 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G G L ++ T++ A K + ++ + D E++++E+ I + + H N+V+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NKMLNHENVVKFY 70
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G + + L ++ C+GGELFDRI E A Q++ V Y H +G+ HRD+
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAYYVAPEVL-RRNYGAE- 249
KPEN L E LK +DFGL+ F+ + + + G+ YVAPE+L RR + AE
Sbjct: 131 KPENLLLD---ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 250 ADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLH 309
D+WS G++L +L+G P W + S + +PW I S+ ++ K+L
Sbjct: 188 VDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILV 246
Query: 310 ADPKERLSAAEVLNHPW 326
+P R++ ++ W
Sbjct: 247 ENPSARITIPDIKKDRW 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 148 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 260
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 261 TARPTINELLN 271
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 14/255 (5%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINR-DDVEDVRREVQIMHHLTGHRNI 130
LG G +G +LV + DT + +A K + ++ + E R E Q++ H+ +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L A++ ++LI+D GGELF + + ++E ++V + + H +G++
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGII 181
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLR---RN 245
+RD+K EN L S+ + TDFGLS F + + D G+ Y+AP+++R
Sbjct: 182 YRDIKLENILLDSNGH---VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIV 304
+ D WS GV++Y LL+G PF + E++ I R I S P+P +S+ AKD++
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQEMSALAKDLI 297
Query: 305 KKMLHADPKERLSAA 319
+++L DPK+RL
Sbjct: 298 QRLLMKDPKKRLGCG 312
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 83
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 144 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 257 TARPTINELLN 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 83
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 144 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 257 TARPTINELLN 267
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 107
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 168 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 281 TARPTINELLN 291
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 105
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 166 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 279 TARPTINELLN 289
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G F + ++ DTK+ FA K + L+ E + E+ I H H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI-HRSLAHQHVVGFH 81
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G +ED V ++++LC L + + +E A RQ+V Y H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K N + ED +K DFGL+ + G+ K L G+ Y+APEVL ++ + E D+
Sbjct: 142 KLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G I+Y LL G PPF + + I + +I+ A +++KML DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
Query: 313 KERLSAAEVLN 323
R + E+LN
Sbjct: 255 TARPTINELLN 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F + +G+G FG L HK + +A K + + ++ + + + + E ++ H +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L +++ + ++D GGELF + + + E A ++ + + Y HS+ ++
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIV 161
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN-YGA 248
+RDLKPEN L S + TDFGL + G+ Y+APEVL + Y
Sbjct: 162 YRDLKPENILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKML 308
D W G +LY +L G+PPF+ ++D IL + PNI++SA+ +++ +L
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLL 274
Query: 309 HADPKERLSAAE 320
D +RL A +
Sbjct: 275 QKDRTKRLGAKD 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 139/288 (48%), Gaps = 43/288 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
++G G +GV + ++DT Q A K K + +D ++ RE++++ L H N
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIK-----KFLESEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+V L + + ++L+ + C L + + E ++ Q + V++CH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-PGDVFKDLVGSAYYVAPEVL--RRNY 246
+HRD+KPEN L + S +K DFG + P D + D V + +Y +PE+L Y
Sbjct: 124 IHRDVKPENILITKH---SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHIDFSS-------- 290
G D+W+ G + LLSGVP + G+++ +++ D I R FS+
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 291 --DP---------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
DP +PNIS A ++K LH DP ERL+ ++L+HP+
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 136
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 196 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 312 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 346
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 93
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 153 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 268
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 269 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 303
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 91
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 151 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 266
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 267 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 301
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 213
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 273 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 329
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 389 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 423
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 86
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 146 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 262 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 15/279 (5%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G G+ + T + + + A K + RK R E + EV IM H N+VE+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR---ELLFNEVVIMRDYQ-HENVVEM 82
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
+Y + ++M+ GG L D I+ +E A +C ++ + H+ GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRR-NYGAEAD 251
+K ++ L + D +K +DFG K K LVG+ Y++APE++ R YG E D
Sbjct: 142 IKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+++ ++ G PP++ E I R ++ +S S K + ++L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 312 PKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
P +R +AAE+L HP++ G P I L R + R
Sbjct: 258 PAQRATAAELLKHPFLAKAG----PPASIVPLMRQNRTR 292
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 37/291 (12%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN------------------- 107
N Y E+G+G +GV L +++ +A K +S +KLI
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 108 ----RDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIM--DLCAGGELFDRIIA 161
R +E V +E+ I+ L H N+V+L +D + +L M +L G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 162 KGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
K SE A + ++ + Y H ++HRD+KP N L ED +K DFG+S F
Sbjct: 132 KP-LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKIADFGVSNEF 187
Query: 222 KPGD-VFKDLVGSAYYVAPEVL---RRNYGAEA-DIWSAGVILYILLSGVPPFWGETEQS 276
K D + + VG+ ++APE L R+ + +A D+W+ GV LY + G PF E
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+ I ++F P +I+ KD++ +ML +P+ R+ E+ HPW+
Sbjct: 248 LHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G+G FG +V DTK+ +A K ++ +K + R++V +V +E+QIM L H +V
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVN 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
L +++D + +++DL GG+L + H+ E ++V + Y + ++HR
Sbjct: 80 LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGA---- 248
D+KP+N L E + TDF ++ + G+ Y+APE+ GA
Sbjct: 140 DMKPDNILLD---EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSF 196
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP--WPNISSSAKDIVKK 306
D WS GV Y LL G P+ + S + + + P W S ++KK
Sbjct: 197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW---SQEMVSLLKK 253
Query: 307 MLHADPKERLSA-AEVLNHPWMR-VDGDA 333
+L +P +R S ++V N P+M ++ DA
Sbjct: 254 LLEPNPDQRFSQLSDVQNFPYMNDINWDA 282
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T + +A K + ++L+N D D++ V+ E + + H +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 69
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 70 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 130 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 187 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 242
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 243 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 285
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T + +A K + ++L+N D D++ V+ E + + H +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 84
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 85 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 145 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKA 257
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQ 300
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T + +A K + ++L+N D D++ V+ E + + H +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 73
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 74 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 134 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 246
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 289
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 27/283 (9%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIV 131
R +GRG + LV K T + +A + + ++L+N D D++ V+ E + + H +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVK-KELVNDDEDIDWVQTEKHVFEQASNHPFLV 116
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
L ++ + +++ GG+L + + E A ++ ++Y H G+++
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLR-RNYGAE 249
RDLK +N L S +K TD+G+ +PGD G+ Y+APE+LR +YG
Sbjct: 177 RDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 250 ADIWSAGVILYILLSGVPPF---------WGETEQSIFDAILRGHIDFSSDPWPNISSSA 300
D W+ GV+++ +++G PF TE +F IL I ++S A
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 289
Query: 301 KDIVKKMLHADPKERLSA------AEVLNHPWMR-VDGDASDK 336
++K L+ DPKERL A++ HP+ R VD D ++
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 332
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 20/253 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRNI 130
LG+G FG +LV + D +Q +A K + L RD V + R++ + H I
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE---VNHPFI 88
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G++
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNY 246
+RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ RR +
Sbjct: 149 YRDLKPENILLD---EEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
AD WS GV+++ +L+G PF G+ + IL+ + +S A+ +++
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 259
Query: 307 MLHADPKERLSAA 319
+ +P RL A
Sbjct: 260 LFKRNPANRLGAG 272
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 20/253 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRNI 130
LG+G FG +LV + D +Q +A K + L RD V + R++ + H I
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE---VNHPFI 88
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G++
Sbjct: 89 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNY 246
+RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ RR +
Sbjct: 149 YRDLKPENILLD---EEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 203
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
AD WS GV+++ +L+G PF G+ + IL+ + +S A+ +++
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 259
Query: 307 MLHADPKERLSAA 319
+ +P RL A
Sbjct: 260 LFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 129/253 (50%), Gaps = 20/253 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGHRNI 130
LG+G FG +LV + D +Q +A K + L RD V + R++ + H I
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE---VNHPFI 89
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G++
Sbjct: 90 VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 149
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNY 246
+RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ RR +
Sbjct: 150 YRDLKPENILLD---EEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGH 204
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
AD WS GV+++ +L+G PF G+ + IL+ + +S A+ +++
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRM 260
Query: 307 MLHADPKERLSAA 319
+ +P RL A
Sbjct: 261 LFKRNPANRLGAG 273
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TNLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
+I + LG+G FG +L K T Q FA K++ ++ DDVE E +++ H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
+ + ++ + ++ +M+ GG+L I + + A +++ + + HS G
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLR-RNY 246
+++RDLK +N L +D +K DFG+ GD + G+ Y+APE+L + Y
Sbjct: 139 IVYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPNISSSAKDIVK 305
D WS GV+LY +L G PF G+ E+ +F +I +D P W + AKD++
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLV 250
Query: 306 KMLHADPKERLSA-AEVLNHPWMR 328
K+ +P++RL ++ HP R
Sbjct: 251 KLFVREPEKRLGVRGDIRQHPLFR 274
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 421
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 422 EVDEMIREADIDGDGQVNYEEFVQMM 447
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 6/149 (4%)
Query: 362 VIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVD 421
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 422 GNGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAK 480
GNGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKL 120
Query: 481 T---IKEIIAEVDIDNDGRINYEEFAAMM 506
T + E+I E DID DG++NYEEF MM
Sbjct: 121 TDEEVDEMIREADIDGDGQVNYEEFVQMM 149
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 147/297 (49%), Gaps = 21/297 (7%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTGH 127
Y+ G LG G +G V +T + A K + +KL + E +V++E+Q++ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-H 65
Query: 128 RNIVELKGAY--EDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+N+++L E++ + ++M+ C G E+ D + K +A C Q++ + Y
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC-QLIDGLEY 124
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP---GDVFKDLVGSAYYVAPE 240
HS G++H+D+KP N L ++ LK + G++ P D + GS + PE
Sbjct: 125 LHSQGIVHKDIKPGNLLLTTGGT---LKISALGVAEALHPFAADDTCRTSQGSPAFQPPE 181
Query: 241 V---LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+ L G + DIWSAGV LY + +G+ PF G+ +F+ I +G D P +S
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS 241
Query: 298 SSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK-QFRAMN 353
D++K ML +P +R S ++ H W R ++ P+ I K ++R+M
Sbjct: 242 ----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMT 294
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 14/261 (5%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T++ +A K + +I DDVE E +++ L + +L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + H G+++RDL
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDL 146
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K +N + S +K DFG+ G ++ G+ Y+APE++ + YG D
Sbjct: 147 KLDNVMLDSEGH---IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDW 203
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PPF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 204 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHP 259
Query: 313 KERLSAA-----EVLNHPWMR 328
+RL +V H + R
Sbjct: 260 AKRLGCGPEGERDVREHAFFR 280
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 383
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 384 EVDEMIREADIDGDGQVNYEEFVQMM 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 386
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 387 EVDEMIREADIDGDGQVNYEEFVQMM 412
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 119
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 120 DEEVDEMIREADIDGDGQVNYEEFVQMM 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 119
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEXLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 124
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 125 EEVDEMIREADIDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 417
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF MM
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 508 K 508
+
Sbjct: 374 R 374
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG +L K T Q FA K++ ++ DDVE E +++ H + +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + ++ +M+ GG+L I + + A +++ + + HS G+++RDL
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDL 145
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N L +D +K DFG+ GD + G+ Y+APE+L + Y D
Sbjct: 146 KLDNILLD---KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDW 202
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP-WPNISSSAKDIVKKMLHAD 311
WS GV+LY +L G PF G+ E+ +F +I +D P W + AKD++ K+ +
Sbjct: 203 WSFGVLLYEMLIGQSPFHGQDEEELFHSI---RMDNPFYPRW--LEKEAKDLLVKLFVRE 257
Query: 312 PKERLSA-AEVLNHPWMR 328
P++RL ++ HP R
Sbjct: 258 PEKRLGVRGDIRQHPLFR 275
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 16/243 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF 135
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 194
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + K G V D VG+ Y++PEVL+ YG
Sbjct: 195 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 251
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D +IS AK+++
Sbjct: 252 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLIC 309
Query: 306 KML 308
L
Sbjct: 310 AFL 312
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
+GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 417
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF MM
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 508 K 508
+
Sbjct: 374 R 374
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLT 118
Query: 482 IKEI---IAEVDIDNDGRINYEEFAAMM 506
+E+ I E DID DG++NYEEF MM
Sbjct: 119 DEEVDQMIREADIDGDGQVNYEEFVQMM 146
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 16/243 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF 140
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + K G V D VG+ Y++PEVL+ YG
Sbjct: 200 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D +IS AK+++
Sbjct: 257 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLIC 314
Query: 306 KML 308
L
Sbjct: 315 AFL 317
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 16/243 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK T++ +A K +S ++I R D E IM +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSPWVVQLF 140
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG +HRD+
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDV 199
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L S LK DFG + K G V D VG+ Y++PEVL+ YG
Sbjct: 200 KPDNMLLDKSGH---LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYG 256
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV LY +L G PF+ ++ + I+ + + F D +IS AK+++
Sbjct: 257 RECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKEAKNLIC 314
Query: 306 KML 308
L
Sbjct: 315 AFL 317
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIREADIDGDGQVNYEEFVTMM 146
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 421 EVDEMIREADIDGDGQVNYEEFVQMM 446
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF MM
Sbjct: 315 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 374
Query: 508 K 508
+
Sbjct: 375 R 375
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVTMM 145
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 419
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 420 EVDEMIREADIDGDGQVNYEEFVQMM 445
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF MM
Sbjct: 314 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMA 373
Query: 508 K 508
+
Sbjct: 374 R 374
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 14/184 (7%)
Query: 335 DKPLDIAVLTRMKQFRAMN--------KLKKVALKVIAENLSEEEIMGLKEMFKSMDTDN 386
D L+ L Q R +N + K + + L+EE+I KE F D D
Sbjct: 256 DTSLEDGCLVYHAQVRGVNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDG 315
Query: 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEF-ITATMHMNRVEREE 445
GTIT +EL + LG +E+E++ ++ D DG+GTID+ EF I M + EE
Sbjct: 316 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEE 375
Query: 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYEEF 502
+ +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID DG++NYEEF
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYEEF 433
Query: 503 AAMM 506
MM
Sbjct: 434 VQMM 437
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF MM
Sbjct: 306 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMA 365
Query: 508 K 508
+
Sbjct: 366 R 366
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 90/148 (60%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 DEEVDEMIRESDIDGDGQVNYEEFVTMM 146
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNG
Sbjct: 1 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDE 118
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EVDEMIREADIDGDGQVNYEEFVQMM 144
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 119 EEVDEMIREADIDGDGQVNYEEFVQMM 145
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAA 504
+AF FDKD G IT +EL ++ + ++++I EVD D DG I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Query: 505 MMRKGNPD 512
MM + D
Sbjct: 71 MMARKMKD 78
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 191
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 244
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 245 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E +ID DG++NYEEF MM
Sbjct: 119 EEVDEMIREANIDGDGQVNYEEFVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
D+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG++NYEEF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
+ + F R LG+G FG L K+T +A K + ++ DDVE E +I+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
H + +L ++ + +M+ GG+L I + E A ++++ + + H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLRRN 245
G+++RDLK +N L K DFG+ G G+ Y+APE+L+
Sbjct: 143 KGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 246 -YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
YG D W+ GV+LY +L G PF E E +F+AIL + + + W + A I+
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGIL 255
Query: 305 KKMLHADPKERLSAAE------VLNHPWMR 328
K + +P RL + +L HP+ +
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 427 DYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
D+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T +
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 118
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG++NYEEF MM
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMM 142
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 87/144 (60%), Gaps = 6/144 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 427 DYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
D+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T +
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEV 119
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG++NYEEF MM
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 192
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 245
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 246 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 211
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 264
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 265 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 219
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 272
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 273 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 204
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 257
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
GTID+ EF+T M + EE + +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLTM-MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMT--NLGEKLTDE 117
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG++NYEEF MM
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVTMM 143
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 27/277 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMH 191
A+ +++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR---- 243
RDLK N LF+ D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDXF---IGTPYWMAPEVVMCETS 212
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R Y +AD+WS G+ L + PP + I + + P SS+ K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFK 271
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
D +KK L + R + +++L HP++ VD S+KP+
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 27/277 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMH 191
A+ +++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR---- 243
RDLK N LF+ D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDSF---IGTPYWMAPEVVMCETS 212
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R Y +AD+WS G+ L + PP + I + + P SS+ K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFK 271
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
D +KK L + R + +++L HP++ VD S+KP+
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 104/171 (60%), Gaps = 3/171 (1%)
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP 400
+L +K F+ N+LKK+AL +IA++L + EI L+ +F ++D DNSGT++ +E+ GL
Sbjct: 25 TLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLK 84
Query: 401 KLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNSG 460
K+G + ++ Q++ D + +G I Y +F+ AT+ ++E F++FD D +G
Sbjct: 85 KIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNG 144
Query: 461 YITMEELEHALKKYNMGDA---KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
I++EEL+ + ++ + K I ++ EVD++ DG I++ EF MM K
Sbjct: 145 KISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 27/277 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKL 99
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMH 191
A+ +++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSV----FFKPGDVFKDLVGSAYYVAPEVLR---- 243
RDLK N LF+ D +K DFG+S + D F +G+ Y++APEV+
Sbjct: 159 RDLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSF---IGTPYWMAPEVVMCETS 212
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R Y +AD+WS G+ L + PP + I + + P SS+ K
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFK 271
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
D +KK L + R + +++L HP++ VD S+KP+
Sbjct: 272 DFLKKCLEKNVDARWTTSQLLQHPFVTVD---SNKPI 305
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 132/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMD-LCAGGELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ + +LFD I +G E A +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 177
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 229
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 192
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 245
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 246 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
AE L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF++ M + EE L +AF+ FD+D +G I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG INYEEF MM
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 6/143 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 428 YIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IK 483
+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T +
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVD 120
Query: 484 EIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG++NYEEF MM
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 134/268 (50%), Gaps = 20/268 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG LV HK +++ +A K +S ++I R D E IM +V+L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSPWVVQLF 141
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
A++D + ++M+ GG+L + +++ E+ A ++V + HSMG++HRD+
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDL-VGSAYYVAPEVLRRN-----YG 247
KP+N L LK DFG + + G V D VG+ Y++PEVL+ YG
Sbjct: 201 KPDNMLLDKHGH---LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYG 257
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGHIDFSSDPWPNISSSAKDIVK 305
E D WS GV L+ +L G PF+ ++ + I+ + + F D IS AK+++
Sbjct: 258 RECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKHAKNLIC 315
Query: 306 KMLHADPKERL---SAAEVLNHPWMRVD 330
L D + RL E+ HP+ + D
Sbjct: 316 AFL-TDREVRLGRNGVEEIKQHPFFKND 342
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 191
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 244
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 245 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 6/143 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 428 YIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IK 483
+ EF+T M + EE + +AF FDKD +GYI+ EL H + N+G+ T +
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVD 118
Query: 484 EIIAEVDIDNDGRINYEEFAAMM 506
E+I E DID DG++NYEEF MM
Sbjct: 119 EMIREADIDGDGQVNYEEFVQMM 141
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 192
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 245
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 246 ---RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + ++VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E+L H ++++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E+L H ++++
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLKI 275
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 219
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 272
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 273 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 224
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ- 277
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 278 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 177
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 229
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 230 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 178
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 230
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 178
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 230
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 129/252 (51%), Gaps = 18/252 (7%)
Query: 75 LGRGQFGVTYLV---THKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
LG+G FG +LV T D+ +A K + L RD V + E I+ + H +V
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKMERDILADVN-HPFVV 93
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+L A++ + LI+D GG+LF R+ + ++E ++ + + HS+G+++
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIY 153
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK---DLVGSAYYVAPEVL-RRNYG 247
RDLKPEN L E+ +K TDFGLS + D K G+ Y+APEV+ R+ +
Sbjct: 154 RDLKPENILLD---EEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
AD WS GV+++ +L+G PF G+ + IL+ + +S+ A+ +++ +
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLLRAL 264
Query: 308 LHADPKERLSAA 319
+P RL +
Sbjct: 265 FKRNPANRLGSG 276
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 178
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 230
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 231 --RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 73
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 74 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 131
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 132 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 247
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E+L H ++++
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 29/285 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHHLTGHRN 129
LG G FG + K+ ++ K I K++ +ED V E+ I+ + H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HAN 90
Query: 130 IVELKGAYEDRHSVNLIMDLCAGG-ELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
I+++ +E++ L+M+ G +LF I E A+ + RQ+V+ V Y
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRN--Y 246
++HRD+K EN + AED +K DFG + + + G +F G+ Y APEVL N
Sbjct: 151 IIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
G E ++WS GV LY L+ PF E E+++ AI ++ +S +V
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPF-CELEETVEAAIHPPYL---------VSKELMSLVSG 257
Query: 307 MLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRA 351
+L P+ R + +++ PW+ +P+++A T + FR
Sbjct: 258 LLQPVPERRTTLEKLVTDPWV-------TQPVNLADYTWEEVFRV 295
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 74
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HRD+K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 248
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E++ H ++++
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF++ M + EE L +AF+ FD+D +G I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E DID DG INYEEF MM
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMM 145
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 205
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 258
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 259 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 20/273 (7%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---EVQ 119
E + + Y G LG G FG Y A K + ++ + ++ + R EV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 120 IMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQM 177
++ ++ G ++ L +E S LI++ +LFD I +G E A + Q+
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 122
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+ Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTRVYS 179
Query: 238 APEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 180 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----R 229
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 230 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 204
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 257
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 138/258 (53%), Gaps = 12/258 (4%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y+ +++G G FG LV + +Q+ K I+ ++ +++ E+ RREV ++ ++ H
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANMK-HP 83
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHS 186
NIV+ + ++E+ S+ ++MD C GG+LF RI A+ + E + Q+ + + H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-R 244
++HRD+K +N + +D ++ DFG++ V ++ + +G+ YY++PE+ +
Sbjct: 144 RKILHRDIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
Y ++DIW+ G +LY L + F + +++ I+ G S + S + +V
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLV 257
Query: 305 KKMLHADPKERLSAAEVL 322
++ +P++R S +L
Sbjct: 258 SQLFKRNPRDRPSVNSIL 275
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 205
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 258
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 259 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 204
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 257
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 258 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L++E+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+ M + EE L +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVM--TNLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E D+D DG++NYEEF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
LKE F+ D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G ++Y EF+
Sbjct: 85 LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQV 144
Query: 435 TM 436
M
Sbjct: 145 MM 146
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 88/147 (59%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L++E+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+ M + EE L +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT--NLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E D+D DG++NYEEF +M
Sbjct: 119 EEVDEMIREADVDGDGQVNYEEFVQVM 145
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE LKE F+ D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G ++
Sbjct: 81 SEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 137
Query: 428 YIEFITATM 436
Y EF+ M
Sbjct: 138 YEEFVQVMM 146
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 43/293 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRNI 130
+G G +G+ +KDT + ++ +K + DD + V+ RE++++ L H N+
Sbjct: 33 VGEGSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQLR-HENL 86
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
V L + + L+ + L D + + Q++ + +CHS ++
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLRRN--YG 247
HRD+KPEN L S S +K DFG + PG+V+ D V + +Y APE+L + YG
Sbjct: 147 HRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 248 AEADIWSAGVILYILLSGVPPFWGETE--------QSIFDAILRGHIDFSSDP------- 292
D+W+ G ++ + G P F G+++ + + I R F+ +P
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL 263
Query: 293 ------------WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDA 333
+P +S D+ KK LH DP +R AE+L+H + ++DG A
Sbjct: 264 PEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFA 316
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 20/276 (7%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR--- 116
K E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 117 EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLC 174
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTR 200
Query: 235 YYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDP 292
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ-- 252
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 253 --RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 23/275 (8%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---E 117
P+E + Y G LG G FG Y A K + ++ + ++ + R E
Sbjct: 1 PLE---SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57
Query: 118 VQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCR 175
V ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 225
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 226 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%), Gaps = 11/268 (4%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D + Y ++G+G G Y T Q+ A + ++ L + E + E+ +M
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRE 74
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ NIV +Y + ++M+ AGG L D ++ + E A +CR+ + + +
Sbjct: 75 -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEF 132
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVL 242
HS V+HR++K +N L D +K TDFG P + +VG+ Y++APEV+
Sbjct: 133 LHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R+ YG + DIWS G++ ++ G PP+ E I +P +S+ +
Sbjct: 190 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFR 248
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + + L D ++R SA E++ H ++++
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 205
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 258
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 259 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 204
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 257
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 258 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 20/277 (7%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-- 116
GK E + + Y G LG G FG Y A K + ++ + ++ + R
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 117 -EVQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANL 173
EV ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGT 205
Query: 234 AYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ- 258
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 259 ---RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 6/147 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ LSEE+I+ KE F D D G IT EEL + L +E E++ ++ D DGN
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 424 GTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTI++ EF++ + + EE L +AF+ FDKD +GYI+ EL H + N+G+ T
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMM 506
++++I E D+D DG++NYEEF MM
Sbjct: 119 EEVEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K + + +EEE LKE FK D D +G I+ EL+ + LG +L++ EV Q+++ AD+
Sbjct: 74 KKVKDTDAEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADL 130
Query: 421 DGNGTIDYIEFITATM 436
DG+G ++Y EF+ M
Sbjct: 131 DGDGQVNYEEFVKMMM 146
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMG-DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKD G IT+EEL ++ + + ++++I+EVD D +G I ++EF ++M
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMA 73
Query: 508 KGNPD 512
K D
Sbjct: 74 KKVKD 78
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 340 IAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
I VL K + + K +K+A+ +IA+ ++ ++ LK F +D D G IT E+LK GL
Sbjct: 19 IHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL 78
Query: 400 PKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDKDNS 459
K G +L + L++ D DG+G IDY EFI A + ++ + + +Y AF FD DN
Sbjct: 79 EKDGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDND 136
Query: 460 GYITMEELEHAL----KKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
G IT EL H L KK N+ D +K +I +VD +NDG+I++ EF+ MM+
Sbjct: 137 GEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 65/77 (84%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADV 420
K +AE LSEEEI GLKE+FK +DTDNSGTITF+ELK GL ++G+ L ESE++ LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 421 DGNGTIDYIEFITATMH 437
D +GTIDY EFI AT+H
Sbjct: 71 DKSGTIDYGEFIAATVH 87
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 437 HM-NRVEREE--HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDID 492
HM R+ EE L + F+ D DNSG IT +EL+ LK+ ++ IK+++ DID
Sbjct: 12 HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADID 71
Query: 493 NDGRINYEEFAA 504
G I+Y EF A
Sbjct: 72 KSGTIDYGEFIA 83
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 84/142 (59%), Gaps = 5/142 (3%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 428 YIEFITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKE 484
+ EF+T + E + +AF FDKD +GYI+ EL H + N+G+ T + E
Sbjct: 61 FPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDE 118
Query: 485 IIAEVDIDNDGRINYEEFAAMM 506
+I E +ID DG++NYEEF MM
Sbjct: 119 MIREANIDGDGQVNYEEFVQMM 140
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 46/73 (63%)
Query: 360 LKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAAD 419
L ++A + + + ++E F+ D D +G I+ EL+ + LG +L++ EV +++ A+
Sbjct: 65 LTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 124
Query: 420 VDGNGTIDYIEFI 432
+DG+G ++Y EF+
Sbjct: 125 IDGDGQVNYEEFV 137
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 86/144 (59%), Gaps = 6/144 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L++E+I KE F D D GTIT +EL + LG +E+E++ ++ D DGNGTI
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 427 DYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
D+ EF+ M + EE L +AF FDKD +G+I+ EL H + N+G+ T +
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMT--NLGEKLTDEEV 118
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
E+I E D+D DG++NYEEF +M
Sbjct: 119 DEMIREADVDGDGQVNYEEFVQVM 142
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE LKE F+ D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G ++
Sbjct: 78 SEEE---LKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVN 134
Query: 428 YIEFITATM 436
Y EF+ M
Sbjct: 135 YEEFVQVMM 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L++++I KE F D D G IT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+ M + EE L +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E D+D DG+INYEEF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYEEFVKVM 146
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE LKE F+ D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G I+
Sbjct: 82 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
Query: 428 YIEFITATM 436
Y EF+ M
Sbjct: 139 YEEFVKVMM 147
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+A+ L+E++I KE F D D G IT +EL + LG +E+E++ ++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT 481
NGTID+ EF+ M + EE L +AF FDKD +G+I+ EL H + N+G+ T
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM--TNLGEKLT 118
Query: 482 ---IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E D+D DG+INY+EF +M
Sbjct: 119 DEEVDEMIREADVDGDGQINYDEFVKVM 146
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE LKE F+ D D +G I+ EL+ + LG +L++ EV +++ ADVDG+G I+
Sbjct: 82 SEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQIN 138
Query: 428 YIEFITATM 436
Y EF+ M
Sbjct: 139 YDEFVKVMM 147
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---E 117
P+E + Y G LG G FG Y A K + ++ + ++ + R E
Sbjct: 1 PLE---SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57
Query: 118 VQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCR 175
V ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE +R R +G A +WS G++LY ++ G PF + E I+RG + F
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ--- 225
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+S + +++ L P +R + E+ NHPWM+
Sbjct: 226 -RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + S G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVL-RRNYGAEADI 252
K +N + S +K DFG+ G K G+ Y+APE++ + YG D
Sbjct: 148 KLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 260
Query: 313 KERLSAA 319
+RL
Sbjct: 261 GKRLGCG 267
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 136/271 (50%), Gaps = 22/271 (8%)
Query: 78 GQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAY 137
G FG Y +K+T A K I ++ + +++ED E+ I+ H NIV+L A+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKLLDAF 76
Query: 138 EDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVHYCHSMGVMHRDLK 195
+++ ++++ CAGG + D ++ + +E +C+Q + ++Y H ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 196 PENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK--DLVGSAYYVAPEVLR------RNYG 247
N LF+ D +K DFG+S + + +G+ Y++APEV+ R Y
Sbjct: 136 AGNILFTL---DGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKM 307
+AD+WS G+ L + PP + I + + P SS+ KD +KK
Sbjct: 193 YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKC 251
Query: 308 LHADPKERLSAAEVLNHPWMRVDGDASDKPL 338
L + R + +++L HP++ VD S+KP+
Sbjct: 252 LEKNVDARWTTSQLLQHPFVTVD---SNKPI 279
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL LG +E+E++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 424 GTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTI 482
GTID+ EF+T + + EE + +AF FDKD +GYI+ EL H N+G+ T
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 119
Query: 483 KEI---IAEVDIDNDGRINYEEF 502
+E+ I E DID DG++NYEEF
Sbjct: 120 EEVDQXIREADIDGDGQVNYEEF 142
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ LG +L++ EV Q + AD+DG+G ++
Sbjct: 82 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVN 138
Query: 428 YIEFI 432
Y EF+
Sbjct: 139 YEEFV 143
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 127/294 (43%), Gaps = 56/294 (19%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G +GV Y + + FA K I K + RE+ I+ L H NIV+L
Sbjct: 9 KIGEGTYGVVY-KAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKL 65
Query: 134 KGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ + L+ +D+C GG + + AK + Q++ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAK---------SFLLQLLNGIA 114
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
YCH V+HRDLKP+N L + E LK DFGL+ F P + V + +Y AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L + Y DIWS G I +++G P F G +E I R +S WPN++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 300 AK-------------------------DIVKKMLHADPKERLSAAEVLNHPWMR 328
K D++ KML DP +R++A + L H + +
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G FG L K T + +A K + +I DDVE E +++ + +L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
++ + +M+ GG+L I G + E A ++ + + S G+++RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 195 KPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADI 252
K +N + S +K DFG+ G K G+ Y+APE++ + YG D
Sbjct: 469 KLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
W+ GV+LY +L+G PF GE E +F +I+ ++ + ++S A I K ++ P
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHP 581
Query: 313 KERLSAA 319
+RL
Sbjct: 582 GKRLGCG 588
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 104 bits (259), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL LG +E+E++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 424 GTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTID+ EF+T + + EE + +AF FDKD +GYI+ EL H N+G+ T
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEF 502
+ E I E DID DG++NYEEF
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEF 141
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ LG +L++ EV + + AD+DG+G ++
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 428 YIEFI 432
Y EF+
Sbjct: 138 YEEFV 142
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 127/294 (43%), Gaps = 56/294 (19%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G +GV Y + + FA K I K + RE+ I+ L H NIV+L
Sbjct: 9 KIGEGTYGVVY-KAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKL 65
Query: 134 KGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ + L+ +D+C GG + + AK + Q++ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAK---------SFLLQLLNGIA 114
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
YCH V+HRDLKP+N L + E LK DFGL+ F P + V + +Y AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDV 171
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L + Y DIWS G I +++G P F G +E I R +S WPN++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 300 AK-------------------------DIVKKMLHADPKERLSAAEVLNHPWMR 328
K D++ KML DP +R++A + L H + +
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 104 bits (259), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/143 (41%), Positives = 83/143 (58%), Gaps = 6/143 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL LG +E+E++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 424 GTIDYIEFITATMHMNR-VEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
GTI++ EF+T + + EE + +AF FDKD +GYI+ EL H N+G+ T
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHV--XTNLGEKLTD 118
Query: 482 --IKEIIAEVDIDNDGRINYEEF 502
+ E I E DID DG++NYEEF
Sbjct: 119 EEVDEXIREADIDGDGQVNYEEF 141
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ LG +L++ EV + + AD+DG+G ++
Sbjct: 81 SEEEI---REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVN 137
Query: 428 YIEFI 432
Y EF+
Sbjct: 138 YEEFV 142
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 127/294 (43%), Gaps = 56/294 (19%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G +GV Y + + FA K I K + RE+ I+ L H NIV+L
Sbjct: 9 KIGEGTYGVVY-KAQNNYGETFALKKIRLEKE-DEGIPSTTIREISILKELK-HSNIVKL 65
Query: 134 KGAYEDRHSVNLI-----------MDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH 182
+ + L+ +D+C GG + + AK + Q++ +
Sbjct: 66 YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAK---------SFLLQLLNGIA 114
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEV 241
YCH V+HRDLKP+N L + E LK DFGL+ F P + + + +Y AP+V
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDV 171
Query: 242 L--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
L + Y DIWS G I +++G P F G +E I R +S WPN++
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTEL 231
Query: 300 AK-------------------------DIVKKMLHADPKERLSAAEVLNHPWMR 328
K D++ KML DP +R++A + L H + +
Sbjct: 232 PKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 23/275 (8%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR---E 117
P+E + Y G LG G FG Y A K + ++ + ++ + R E
Sbjct: 1 PLE---SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 57
Query: 118 VQIMHHLT-GHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCR 175
V ++ ++ G ++ L +E S LI++ +LFD I +G E A +
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q++ V +CH+ GV+HRD+K EN L + + LK DFG K V+ D G+
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 236 YVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE +R R +G A +WS G++LY ++ G PF + E I+ G + F
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ--- 225
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+SS + +++ L P +R + E+ NHPWM+
Sbjct: 226 -RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 24/286 (8%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED---VRREVQ 119
E Y G LG+G FG + + Q A K I +++ + D EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 120 IMHHLT---GHRNIVELKGAYEDRHSVNLIMD-LCAGGELFDRIIAKGHYSERAAANLCR 175
++ + GH ++ L +E + L+++ +LFD I KG E +
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG 146
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
Q+V + +CHS GV+HRD+K EN L + K DFG + + D G+
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLH-DEPYTDFDGTRV 203
Query: 236 YVAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPW 293
Y PE + R+ + A +WS G++LY ++ G PF E +Q I +A + F +
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--ERDQEILEA----ELHFPA--- 254
Query: 294 PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLD 339
++S ++++ L P R S E+L PWM+ A D PL+
Sbjct: 255 -HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLN 297
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 42/297 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P R+ Y +G G V K++ A K I+ K + ++++ +E+Q
Sbjct: 9 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQA 66
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYS-----ERAAAN 172
M H NIV ++ + + L+M L +GG + D I+AKG + E A
Sbjct: 67 MSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 125
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG------DV 226
+ R+++ + Y H G +HRD+K N L ED ++ DFG+S F G V
Sbjct: 126 ILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 227 FKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
K VG+ ++APEV+ R Y +ADIWS G+ L +G P+ +
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------ 236
Query: 285 HIDFSSDPWPNISSSAKD-------------IVKKMLHADPKERLSAAEVLNHPWMR 328
+ +DP P++ + +D ++ L DP++R +AAE+L H + +
Sbjct: 237 MLTLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 42/297 (14%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P R+ Y +G G V K++ A K I+ K + ++++ +E+Q
Sbjct: 4 PWSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQA 61
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFD---RIIAKGHYS-----ERAAAN 172
M H NIV ++ + + L+M L +GG + D I+AKG + E A
Sbjct: 62 MSQ-CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIAT 120
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG------DV 226
+ R+++ + Y H G +HRD+K N L ED ++ DFG+S F G V
Sbjct: 121 ILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 227 FKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
K VG+ ++APEV+ R Y +ADIWS G+ L +G P+ +
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL------ 231
Query: 285 HIDFSSDPWPNISSSAKD-------------IVKKMLHADPKERLSAAEVLNHPWMR 328
+ +DP P++ + +D ++ L DP++R +AAE+L H + +
Sbjct: 232 MLTLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 16/207 (7%)
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAG-GELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+G ++ L +E S LI++ +LFD I +G E A + Q++ V +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
CH+ GV+HRD+K EN L + + LK DFG K V+ D G+ Y PE +R
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGE--LKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIR 229
Query: 244 --RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R +G A +WS G++LY ++ G PF + E I+RG + F +SS +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQ 279
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+++ L P +R + E+ NHPWM+
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 30/269 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E++I+ H IV+L
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILA-TCDHPYIVKL 81
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
GAY + ++++ C GG + D I+ + +E +CRQM+ +++ HS ++H
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 140
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGDVFKDLVGSAYYVAPEVLR------R 244
RDLK N L + + ++ DFG+S K +G+ Y++APEV+
Sbjct: 141 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK--- 301
Y +ADIWS G+ L + PP + I + SDP P + + +K
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSV 250
Query: 302 ---DIVKKMLHADPKERLSAAEVLNHPWM 327
D +K L +P+ R SAA++L HP++
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 133/269 (49%), Gaps = 30/269 (11%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELG G FG Y +K+T A K I ++ + +++ED E++I+ H IV+L
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILAT-CDHPYIVKL 73
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
GAY + ++++ C GG + D I+ + +E +CRQM+ +++ HS ++H
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVF-FKPGDVFKDLVGSAYYVAPEVLR------R 244
RDLK N L + + ++ DFG+S K +G+ Y++APEV+
Sbjct: 133 RDLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK--- 301
Y +ADIWS G+ L + PP + I + SDP P + + +K
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK------SDP-PTLLTPSKWSV 242
Query: 302 ---DIVKKMLHADPKERLSAAEVLNHPWM 327
D +K L +P+ R SAA++L HP++
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 12/272 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+NT+ R LG+G FG + T + +ACK + +++ R E QI+ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVH 182
R +V L AYE + ++ L++ L GG+L I G + E A ++ +
Sbjct: 242 NS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H +++RDLKPEN L ++ +D GL+V G K VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y D W+ G +LY +++G PF ++ + + R + + S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+ ++L DP ERL SA EV HP +
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 12/272 (4%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+NT+ R LG+G FG + T + +ACK + +++ R E QI+ +
Sbjct: 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV 241
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVTVVH 182
R +V L AYE + ++ L++ L GG+L I G + E A ++ +
Sbjct: 242 NS-RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300
Query: 183 YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL 242
H +++RDLKPEN L ++ +D GL+V G K VG+ Y+APEV+
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
Query: 243 R-RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y D W+ G +LY +++G PF ++ + + R + + S A+
Sbjct: 358 KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQAR 417
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+ ++L DP ERL SA EV HP +
Sbjct: 418 SLCSQLLCKDPAERLGCRGGSAREVKEHPLFK 449
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 8/177 (4%)
Query: 337 PLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELK 396
+DI VL K + M + +K+A+ +IA+ ++ ++ LK F +D + G IT +L+
Sbjct: 19 KIDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLR 78
Query: 397 AGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFEYFDK 456
GL + G L + L++ D DG+G IDY EF+ A + ++ + + +Y AF FD
Sbjct: 79 KGLERSGLMLPPN-FDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDV 136
Query: 457 DNSGYITMEELEHAL----KKYNMG--DAKTIKEIIAEVDIDNDGRINYEEFAAMMR 507
DN G IT EL H L K+ N+ D +K++I EVD + DG+I++ EF+ MM+
Sbjct: 137 DNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFSEMMK 193
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 142/351 (40%), Gaps = 81/351 (23%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+ V Y ++LG+G +G+ + + T + A K I N D + RE+
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREI 59
Query: 119 QIMHHLTGHRNIVELKGAY--EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQ 176
I+ L+GH NIV L ++ V L+ D +I + Q
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQ 117
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF--------------- 221
++ V+ Y HS G++HRD+KP N L ++ +K DFGLS F
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECH---VKVADFGLSRSFVNIRRVTNNIPLSIN 174
Query: 222 ---------KPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFW 270
+P + D V + +Y APE+L Y D+WS G IL +L G P F
Sbjct: 175 ENTENFDDDQP--ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
Query: 271 GETEQSIFDAILRGHIDFSSD----------------------------------PWPNI 296
G + + + I+ G IDF S+ W N+
Sbjct: 233 GSSTMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291
Query: 297 ----------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKP 337
+ A D++ K+L +P +R+SA + L HP++ + + +++P
Sbjct: 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 84/146 (57%), Gaps = 6/146 (4%)
Query: 365 ENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNG 424
+ L+EE+I KE F D D G IT ++L + LG +E+E++ ++ DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 425 TIDYIEFITATMH-MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-- 481
TID+ +F+T M + EE + +AF F KD +GYI+ +L H + N+G+ T
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMT--NLGEKLTDE 420
Query: 482 -IKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I E ID DG++NYE+F MM
Sbjct: 421 EVDEMIREAGIDGDGQVNYEQFVQMM 446
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE++ KE F D D G IT EL + LG +E+E+R +M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 424 GTIDYIEFI-TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAK 480
GT+D+ EF+ M + EE + +AF FDKD +G+++ EL H + + + D +
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 481 TIKEIIAEVDIDNDGRINYEEFAAMM 506
+ E+I D D DG++NYEEF ++
Sbjct: 121 -VDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-REVQIMHHLTGHRNIVE 132
+LG G +G Y T + A K I R + V REV ++ L HRNI+E
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI--RLEHEEEGVPGTAIREVSLLKELQ-HRNIIE 97
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
LK H ++LI + A +L + S R + Q++ V++CHS +HR
Sbjct: 98 LKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR 156
Query: 193 DLKPENFLFS-SSAEDSP-LKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRNYG 247
DLKP+N L S S A ++P LK DFGL+ F P F + + +Y PE+L R+Y
Sbjct: 157 DLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYS 216
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAILRGHIDFSSDPWPNISS----- 298
DIWS I +L P F G++E IF+ + G D ++ WP +++
Sbjct: 217 TSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL--GLPDDTT--WPGVTALPDWK 272
Query: 299 ---------SAKDIV------------KKMLHADPKERLSAAEVLNHPWM 327
+ K ++ ML DP +R+SA L HP+
Sbjct: 273 QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 103/176 (58%), Gaps = 10/176 (5%)
Query: 342 VLTRMKQFRAMNKLKKVALKVIAENL-SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLP 400
+ M++F+ KL + AL +A L S+EE L ++F+ +D + G + +EL G
Sbjct: 31 AIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYS 90
Query: 401 KL-GTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLYKAFE 452
KL G ++ ESEV ++ AAD D NG IDY EF+T M + ++ L AF+
Sbjct: 91 KLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQ 150
Query: 453 YFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
FD+D +G I+++EL ++ ++KT KE+I+ +D +NDG +++EEF M++K
Sbjct: 151 KFDQDGNGKISVDELASVFGLDHL-ESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 25/264 (9%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG G +G Y HK+T Q A K + D++++ +E+ IM ++V+
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPV-----ESDLQEIIKEISIMQQCDSP-HVVKY 89
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
G+Y + ++M+ C G + D I + +E A + + + + Y H M +HR
Sbjct: 90 YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRR-NYGAEA 250
D+K N L ++ K DFG++ ++ ++G+ +++APEV++ Y A
Sbjct: 150 DIKAGNILLNTEGH---AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVA 206
Query: 251 DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI------SSSAKDIV 304
DIWS G+ + G PP+ I +R ++P P S + D V
Sbjct: 207 DIWSLGITAIEMAEGKPPY-----ADIHP--MRAIFMIPTNPPPTFRKPELWSDNFTDFV 259
Query: 305 KKMLHADPKERLSAAEVLNHPWMR 328
K+ L P++R +A ++L HP++R
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFVR 283
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 7/159 (4%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
+ NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 424 GTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAK 480
I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L + DA+
Sbjct: 62 HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE 121
Query: 481 TIKEIIAEVDIDNDGRINYEEFAAMMRKGNPDMVGNRRR 519
+ +++ EV D G IN ++FAA++ KG+ G RR+
Sbjct: 122 -VDDMLREVS-DGSGEINIQQFAALLSKGSS--TGTRRK 156
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 127/264 (48%), Gaps = 18/264 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G+ Y + + A K I R + + + E+ + HL H+NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 85
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMH 191
G++ + + + M+ GG L + +K +E+ +Q++ + Y H ++H
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGSAYYVAPEVL---RRNYG 247
RD+K +N L ++ + LK +DFG S + G+ Y+APE++ R YG
Sbjct: 146 RDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 248 AEADIWSAGVILYILLSGVPPFW--GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
ADIWS G + + +G PPF+ GE + ++F G + ++S+ AK +
Sbjct: 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 260
Query: 306 KMLHADPKERLSAAEVLNHPWMRV 329
K DP +R A ++L +++V
Sbjct: 261 KCFEPDPDKRACANDLLVDEFLKV 284
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 136/313 (43%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 75
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 132
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF---------------WGETEQSI 277
+Y APE++ + Y DIWS G IL +LS P F G EQ
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQED 249
Query: 278 FDAIL----RGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+ I+ R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 310 YLEQYYDPSDEPI 322
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 97
Query: 124 LTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V L+ L G +L+ +++ H S Q++
Sbjct: 98 FR-HENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 332 YLEQYYDPSDEPI 344
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 123/251 (49%), Gaps = 14/251 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+++GRGQF Y A K + L++ D +E+ ++ L H N+++
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIK 96
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRII-----AKGHYSERAAANLCRQMVTVVHYCHSM 187
++ + + +N++++L G+L R+I K ER Q+ + + + HS
Sbjct: 97 YYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFK-DLVGSAYYVAPEVLRRN- 245
VMHRD+KP N +++ +K D GL FF LVG+ YY++PE + N
Sbjct: 156 RVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212
Query: 246 YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR-GHIDFSSDPWPNISSSAKDIV 304
Y ++DIWS G +LY + + PF+G+ + +++ + D+ P + S + +V
Sbjct: 213 YNFKSDIWSLGCLLYEMAALQSPFYGD-KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 271
Query: 305 KKMLHADPKER 315
++ DP++R
Sbjct: 272 NMCINPDPEKR 282
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISS--RKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
LG G +GV THK T + A K I + L + RE++I+ H H NI+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFK-HENIIT 73
Query: 133 L-----KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ ++E+ + V +I +L R+I+ S+ Q + V H
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-----------FKDLVGSAYY 236
V+HRDLKP N L +S+ + LK DFGL+ + V + +Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 237 VAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID--- 287
APEV+ + Y D+WS G IL L P F G + IF I H D
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 288 -----------------FSSDP----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ + P +P ++ D++++ML DP +R++A E L HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 327 MRVDGDASDKP 337
++ D +D+P
Sbjct: 309 LQTYHDPNDEP 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISS--RKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
LG G +GV THK T + A K I + L + RE++I+ H H NI+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFK-HENIIT 73
Query: 133 L-----KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ ++E+ + V +I +L R+I+ S+ Q + V H
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-----------FKDLVGSAYY 236
V+HRDLKP N L +S+ + LK DFGL+ + V + +Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 237 VAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID--- 287
APEV+ + Y D+WS G IL L P F G + IF I H D
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 288 -----------------FSSDP----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ + P +P ++ D++++ML DP +R++A E L HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 327 MRVDGDASDKP 337
++ D +D+P
Sbjct: 309 LQTYHDPNDEP 319
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 22/263 (8%)
Query: 60 KPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQ 119
K M R + + +GRG FG +V K+ + FA K ++ +++ R + R E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR---- 175
++ + + I L A++D +++ L+MD GG+L + + +R + R
Sbjct: 127 VLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLA 182
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-FFKPGDVFKDL-VGS 233
+MV + H + +HRD+KP+N L + ++ DFG + + G V + VG+
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 234 AYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL--RGH 285
Y++PE+L+ YG E D WS GV +Y +L G PF+ E+ + I+ +
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299
Query: 286 IDFSSDPWPNISSSAKDIVKKML 308
F + ++S +AKD++++++
Sbjct: 300 FQFPTQV-TDVSENAKDLIRRLI 321
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 132/311 (42%), Gaps = 58/311 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISS--RKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
LG G +GV THK T + A K I + L + RE++I+ H H NI+
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL----REIKILKHFK-HENIIT 73
Query: 133 L-----KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ ++E+ + V +I +L R+I+ S+ Q + V H
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-----------FKDLVGSAYY 236
V+HRDLKP N L +S+ + LK DFGL+ + V + +Y
Sbjct: 132 NVIHRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 237 VAPEVLRRN--YGAEADIWSAGVILYILLSGVPPFWGETEQS----IFDAILRGHID--- 287
APEV+ + Y D+WS G IL L P F G + IF I H D
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 288 -----------------FSSDP----WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPW 326
+ + P +P ++ D++++ML DP +R++A E L HP+
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 327 MRVDGDASDKP 337
++ D +D+P
Sbjct: 309 LQTYHDPNDEP 319
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 85
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 86 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 142
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 260 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 319
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 320 YLEQYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 312 YLEQYYDPSDEPI 324
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 79
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 314 YLEQYYDPSDEPI 326
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 75
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 132
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 249
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 310 YLEQYYDPSDEPI 322
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 97
Query: 124 LTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 98 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 154
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 332 YLEQYYDPSDEPI 344
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 312 YLEQYYDPSDEPI 324
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 82
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 139
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 317 YLEQYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 83
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 84 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 140
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 257
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 258 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 317
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 318 YLEQYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 74
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 75 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 131
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 248
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 249 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 308
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 309 YLEQYYDPSDEPI 321
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 18/263 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G +G+ Y + + A K I R + + + E+ + HL H+NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLK-HKNIVQYL 71
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKG---HYSERAAANLCRQMVTVVHYCHSMGVMH 191
G++ + + + M+ GG L + +K +E+ +Q++ + Y H ++H
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-GDVFKDLVGSAYYVAPEVL---RRNYG 247
RD+K +N L ++ + LK +DFG S + G+ Y+APE++ R YG
Sbjct: 132 RDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 248 AEADIWSAGVILYILLSGVPPFW--GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
ADIWS G + + +G PPF+ GE + ++F G + ++S+ AK +
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVHPEIPESMSAEAKAFIL 246
Query: 306 KMLHADPKERLSAAEVLNHPWMR 328
K DP +R A ++L +++
Sbjct: 247 KCFEPDPDKRACANDLLVDEFLK 269
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 82
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 139
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 317 YLEQYYDPSDEPI 329
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 32/289 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G +G Y H T Q A K + + D+ E++++E+ ++ + HRNI
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 135 GAYEDRH------SVNLIMDLCAGGELFDRII-AKGH-YSERAAANLCRQMVTVVHYCHS 186
GA+ ++ + L+M+ C G + D I KG+ E A +CR+++ + + H
Sbjct: 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVLR-- 243
V+HRD+K +N L + +AE +K DFG+S + +G+ Y++APEV+
Sbjct: 148 HKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 244 ----RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-FSSDPWPNISS 298
Y ++D+WS G+ + G PP I R S W S
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SK 261
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMK 347
+ ++ L + +R + +++ HP++R D+P + V ++K
Sbjct: 262 KFQSFIESCLVKNHSQRPATEQLMKHPFIR------DQPNERQVRIQLK 304
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 135/313 (43%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL---------- 282
+Y APE++ + Y DIWS G IL +LS P F G+ + IL
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 283 ---------RGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 312 YLEQYYDPSDEPI 324
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 121/300 (40%), Gaps = 60/300 (20%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR-REVQIMHHLTGHRNIVE 132
+LG G + Y +K T A K + KL + + RE+ +M L H NIV
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKELK-HENIVR 67
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR------------QMVTV 180
L + + L+ E D + K + R N R Q++
Sbjct: 68 LYDVIHTENKLTLVF------EFMDNDLKK-YMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAP 239
+ +CH ++HRDLKP+N L + + LK DFGL+ F P + F V + +Y AP
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 240 EVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS 297
+VL R Y DIWS G IL +++G P F G ++ I + WP+++
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 298 SSAK------------------------------DIVKKMLHADPKERLSAAEVLNHPWM 327
K D + +L +P RLSA + L+HPW
Sbjct: 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 135/313 (43%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL---------- 282
+Y APE++ + Y DIWS G IL +LS P F G+ + IL
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 283 ---------RGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 312 YLEQYYDPSDEPI 324
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 77
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 134
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 312 YLEQYYDPSDEPI 324
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+ ++E F DTD SGTI +ELK + LG + E+++++ D DG+GTI
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 427 DYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIK 483
D+ EF+T T M + E + KAF FD DNSG IT+++L K+ N+ + + ++
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE-LQ 140
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
E+IAE D ++D I+ +EF +M+K
Sbjct: 141 EMIAEADRNDDNEIDEDEFIRIMKK 165
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKCQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLA 79
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++++ LK DFGL+ P + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL---------- 282
+Y APE++ + Y DIWS G IL +LS P F G+ + IL
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 283 ---------RGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 314 YLAQYYDPSDEPI 326
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 341 AVLTRMKQFRAMNKLKKVALKVIAENLSE-EEIMGLKEMFKSMDTDNSGTITFEELKAGL 399
L MK+F++ KL + A+ + L+ EE L ++F+ +D + G + +EL G
Sbjct: 7 GALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY 66
Query: 400 PKL----GTRLS-------ESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREEHLY 448
KL G +S E+EV ++++ D D NG I+Y EF+T M + E L
Sbjct: 67 RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLL 126
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
AF+ FD D SG IT EEL + D +T +++ E D +NDG +++EEF MM+K
Sbjct: 127 AAFQQFDSDGSGKITNEELGRLFGVTEVDD-ETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K M+ R + + +GRG FG +V K+T++ +A K ++ +++ R + R E
Sbjct: 65 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 118 VQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR- 175
++ + G + I L A++D + + L+MD GG+L +++K + ++ ++ R
Sbjct: 125 RDVL--VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSK--FEDKLPEDMARF 179
Query: 176 ---QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--L 230
+MV + H + +HRD+KP+N L + ++ DFG + +
Sbjct: 180 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVA 236
Query: 231 VGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
VG+ Y++PE+L+ YG E D WS GV +Y +L G PF+ E+ + I+
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 285 HIDFS-SDPWPNISSSAKDIVKKML 308
F ++S AKD++++++
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYXQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 132/265 (49%), Gaps = 22/265 (8%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K M+ R + + +GRG FG +V K+T++ +A K ++ +++ R + R E
Sbjct: 81 LVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 118 VQIMHHLTGH-RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR- 175
++ + G + I L A++D + + L+MD GG+L +++K + ++ ++ R
Sbjct: 141 RDVL--VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSK--FEDKLPEDMARF 195
Query: 176 ---QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--L 230
+MV + H + +HRD+KP+N L + ++ DFG + +
Sbjct: 196 YIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVA 252
Query: 231 VGSAYYVAPEVLRR------NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
VG+ Y++PE+L+ YG E D WS GV +Y +L G PF+ E+ + I+
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 285 HIDFS-SDPWPNISSSAKDIVKKML 308
F ++S AKD++++++
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A + IS + ++ + RE++I+
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFE--HQTYCQRTLREIKILLR 81
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 138
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 316 YLEQYYDPSDEPI 328
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 56/322 (17%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
D+ + Y+ + LG G G+ + D ++ A K I L + V+ RE++I+
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 124 LTGHRNIVEL--------------KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA 169
L H NIV++ G+ + +SV ++ + ++ +G E
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEH 121
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP-----G 224
A Q++ + Y HS V+HRDLKP N ++ ED LK DFGL+ P G
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHKG 179
Query: 225 DVFKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWG--ETEQ----- 275
+ + LV + +Y +P +L NY D+W+AG I +L+G F G E EQ
Sbjct: 180 HLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 276 ---------------SIFDAILRGHIDFSSDPW----PNISSSAKDIVKKMLHADPKERL 316
S+ +R + P P IS A D ++++L P +RL
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 317 SAAEVLNHPWMRVDGDASDKPL 338
+A E L+HP+M + D+P+
Sbjct: 299 TAEEALSHPYMSIYSFPMDEPI 320
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
DV Y +G G +G+ K + A K IS + ++ + RE++I+
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLA 79
Query: 124 LTGHRNIVELKG-----AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
H NI+ + E V ++ DL +L+ +++ H S Q++
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDL-METDLY-KLLKTQHLSNDHICYFLYQIL 136
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD----VFKDLVGSA 234
+ Y HS V+HRDLKP N L +++ + LK DFGL+ P + V +
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWG-------------------ET 273
+Y APE++ + Y DIWS G IL +LS P F G E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 274 EQSIFDAILRGHI----DFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
I + R ++ + PW PN S A D++ KML +P +R+ + L HP
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 326 WMRVDGDASDKPL 338
++ D SD+P+
Sbjct: 314 YLAQYYDPSDEPI 326
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 88/149 (59%), Gaps = 5/149 (3%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+++NL+EE+I KE F D DNSG+I+ EL + LG SE+EV LM DVDG
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 423 NGTIDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDA 479
N I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L + DA
Sbjct: 61 NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+ + E++ EV D G IN ++FAA++ K
Sbjct: 121 E-VDEMLREVS-DGSGEINIKQFAALLSK 147
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 130/313 (41%), Gaps = 63/313 (20%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--- 115
GK E Y + +G G FGV F K + S ++ + ++D R
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVV-----------FQAKLVESDEVAIKKVLQDKRFKN 80
Query: 116 REVQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERA 169
RE+QIM + H N+V+LK + +D +NL+++ E R A HY++
Sbjct: 81 RELQIMR-IVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYR--ASRHYAKLK 135
Query: 170 AAN-------LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK 222
Q++ + Y HS+G+ HRD+KP+N L + LK DFG +
Sbjct: 136 QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS--GVLKLIDFGSAKILI 193
Query: 223 PGDVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDA 280
G+ + S YY APE++ NY DIWS G ++ L+ G P F GE+
Sbjct: 194 AGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVE 253
Query: 281 I--------------------------LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKE 314
I +R H FS P A D++ ++L P
Sbjct: 254 IIKVLGTPSREQIKTMNPNYMEHKFPQIRPH-PFSKVFRPRTPPDAIDLISRLLEYTPSA 312
Query: 315 RLSAAEVLNHPWM 327
RL+A E L HP+
Sbjct: 313 RLTAIEALCHPFF 325
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQIMHHLTGHRNI 130
++G G +G + +++T + A K + ++ DD RE+ ++ L H+NI
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVR----LDDDDEGVPSSALREICLLKELK-HKNI 63
Query: 131 VELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V L + L+ + C + FD G + Q++ + +CHS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRN 245
V+HRDLKP+N L + + E LK DFGL+ F P + V + +Y P+VL +
Sbjct: 122 VLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 246 YGAEADIWSAGVILYILLSGVPP-FWGETEQSIFDAILRGHIDFSSDPWPNIS------- 297
Y D+WSAG I L + P F G I R + + WP+++
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 298 ------------------SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
++ +D+++ +L +P +R+SA E L HP+
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 22/225 (9%)
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNL--IMDLCAGGELFDRIIAKG-----HYSERA 169
EV ++ L H NIV DR + L +M+ C GG+L +I KG + E
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 170 AANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ Q+ + CH V+HRDLKP N +K DFGL+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHD 169
Query: 225 DVF-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
+ F K+ VG+ YY++PE + R +Y ++DIWS G +LY L + +PPF +++ + I
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
G F P+ S +I+ +ML+ R S E+L +P +
Sbjct: 230 EGK--FRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 100
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 155
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 213
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 214 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 265
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 266 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 318
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 319 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 375
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 376 AR-IQAAASTPTNAT 389
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 106
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 161
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 219
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 271
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 272 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 324
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 325 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 381
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 382 AR-IQAAASTPTNAT 395
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 108
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLY 163
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 221
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 222 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 273
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 274 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 326
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 327 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 383
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 384 AR-IQAAASTPTNAT 397
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 15/257 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 179 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-FSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S W S ++ V
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 289
Query: 308 LHADPKERLSAAEVLNH 324
L P++R ++ +L H
Sbjct: 290 LQKIPQDRPTSEVLLKH 306
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 151
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLY 206
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 264
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 265 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 316
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 317 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 369
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 370 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 426
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 427 AR-IQAAASTPTNAT 440
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 110
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYS-RAKQTLPVIYVKLY 165
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 223
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 224 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 275
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 276 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 328
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 329 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 385
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 386 AR-IQAAASTPTNAT 399
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDD---VEDVRREVQIMHHLTGHRNI 130
++G G +G + +++T + A K + ++ DD RE+ ++ L H+NI
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVR----LDDDDEGVPSSALREICLLKELK-HKNI 63
Query: 131 VELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
V L + L+ + C + FD G + Q++ + +CHS
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL--RRN 245
V+HRDLKP+N L + + E LK +FGL+ F P + V + +Y P+VL +
Sbjct: 122 VLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 246 YGAEADIWSAGVILYILL-SGVPPFWGETEQSIFDAILRGHIDFSSDPWPNIS------- 297
Y D+WSAG I L +G P F G I R + + WP+++
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 298 ------------------SSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
++ +D+++ +L +P +R+SA E L HP+
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 106
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 161
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 219
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 271
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 272 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 324
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 325 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 381
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 382 AR-IQAAASTPTNAT 395
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 51/375 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 77
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 132
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICS 190
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 191 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 242
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 243 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 295
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 296 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 352
Query: 411 VRQLMEAADVDGNGT 425
R + AA N T
Sbjct: 353 AR-IQAAASTPTNAT 366
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 21/256 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-----VRREVQIMHHLTGHRN 129
LG GQF Y K+T Q A K I KL +R + +D RE++++ L+ H N
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQELS-HPN 73
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVH---YCHS 186
I+ L A+ + +++L+ D E +I K + +++ M+ + Y H
Sbjct: 74 IIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF-KPGDVFKDLVGSAYYVAPEVL--R 243
++HRDLKP N L E+ LK DFGL+ F P + V + +Y APE+L
Sbjct: 131 HWILHRDLKPNNLLLD---ENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGA 187
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI 303
R YG D+W+ G IL LL VP G+++ I + + WP++ S +
Sbjct: 188 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 247
Query: 304 VKKMLHADPKERLSAA 319
K P + +A
Sbjct: 248 TFKSFPGIPLHHIFSA 263
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 15/257 (5%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
RE+G G FG Y + A K +S + + +D+ +EV+ + L H N ++
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHR 192
+G Y H+ L+M+ C G + K E A + + + Y HS ++HR
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 193 DLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL----RRNYGA 248
D+K N L S E +K DFG + P + F VG+ Y++APEV+ Y
Sbjct: 140 DVKAGNILLS---EPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 249 EADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID-FSSDPWPNISSSAKDIVKKM 307
+ D+WS G+ L PP + S I + S W S ++ V
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 308 LHADPKERLSAAEVLNH 324
L P++R ++ +L H
Sbjct: 251 LQKIPQDRPTSEVLLKH 267
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K ++ TY+ +G G +G K + ++ A K +S R + + RE
Sbjct: 33 VNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRE 91
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK---GHYSERAAANLC 174
+ ++ H+ H N++ L + S+ D + K +SE L
Sbjct: 92 LLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGS 233
QM+ + Y HS GV+HRDLKP N + ED LK DFGL+ + D V +
Sbjct: 151 YQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLA---RHADAEMTGYVVT 204
Query: 234 AYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWG-------------------E 272
+Y APEV+ +Y DIWS G I+ +L+G F G E
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 273 TEQSIFDAILRGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
Q + D + +I DF+ +P S A D+++KML D +RL+AA+ L
Sbjct: 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALT 323
Query: 324 HPWM 327
HP+
Sbjct: 324 HPFF 327
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNL--IMDLCAGGELFDRIIAKG-----HYSERA 169
EV ++ L H NIV DR + L +M+ C GG+L +I KG + E
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 170 AANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ Q+ + CH V+HRDLKP N +K DFGL+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHD 169
Query: 225 DVF-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
F K VG+ YY++PE + R +Y ++DIWS G +LY L + +PPF +++ + I
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
G F P+ S +I+ +ML+ R S E+L +P +
Sbjct: 230 EG--KFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 137/318 (43%), Gaps = 47/318 (14%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+P DV Y + +G G +G+ K + A K IS + ++ + RE+
Sbjct: 36 GQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFE--HQTYCQRTLREI 92
Query: 119 QIMHHLTGHRNIVELK-----GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
QI+ H N++ ++ E V ++ DL +L+ +++ S
Sbjct: 93 QILLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYF 149
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP----GDVFKD 229
Q++ + Y HS V+HRDLKP N L +++ + LK DFGL+ P +
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLTE 206
Query: 230 LVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF---------------WGE 272
V + +Y APE++ + Y DIWS G IL +LS P F G
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
Query: 273 TEQSIFDAI--LRGHIDFSSDP----------WPNISSSAKDIVKKMLHADPKERLSAAE 320
Q + I ++ S P +P S A D++ +ML +P +R++ E
Sbjct: 267 PSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEE 326
Query: 321 VLNHPWMRVDGDASDKPL 338
L HP++ D +D+P+
Sbjct: 327 ALAHPYLEQYYDPTDEPV 344
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
+ K ++ TY+ +G G +G K + ++ A K +S R + + RE
Sbjct: 15 VNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-RPFQSEIFAKRAYRE 73
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK---GHYSERAAANLC 174
+ ++ H+ H N++ L + S+ D + K +SE L
Sbjct: 74 LLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGS 233
QM+ + Y HS GV+HRDLKP N + ED LK DFGL+ + D V +
Sbjct: 133 YQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLA---RHADAEMTGYVVT 186
Query: 234 AYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWG-------------------E 272
+Y APEV+ +Y DIWS G I+ +L+G F G E
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 273 TEQSIFDAILRGHI---------DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
Q + D + +I DF+ +P S A D+++KML D +RL+AA+ L
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALT 305
Query: 324 HPWM 327
HP+
Sbjct: 306 HPFF 309
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 22/225 (9%)
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNL--IMDLCAGGELFDRIIAKG-----HYSERA 169
EV ++ L H NIV DR + L +M+ C GG+L +I KG + E
Sbjct: 55 EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEF 112
Query: 170 AANLCRQMVTVVHYCHSMG-----VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
+ Q+ + CH V+HRDLKP N +K DFGL+
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHD 169
Query: 225 DVF-KDLVGSAYYVAPEVLRR-NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
F K VG+ YY++PE + R +Y ++DIWS G +LY L + +PPF +++ + I
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
G F P+ S +I+ +ML+ R S E+L +P +
Sbjct: 230 EG--KFRRIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
+ Y +LG G YL + A K+I + ++ REV L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 125 TGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
+ H+NIV + E+ L+M+ G L + I + G S A N Q++ + +
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD--LVGSAYYVAPEVL 242
H M ++HRD+KP+N L S + LK DFG++ + + ++G+ Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILIDS---NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 243 RRNYGAEA-DIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSA- 300
+ E DI+S G++LY +L G PPF GET SI I D PN+++
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDSVPNVTTDVR 237
Query: 301 KDIVKKM 307
KDI + +
Sbjct: 238 KDIPQSL 244
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQF-ACKSISSRKLINRDDVED------VRREVQIMHHLTG 126
++G G +GV Y KD++ + A K I R D ED RE+ ++ L
Sbjct: 28 KVGEGTYGVVY--KAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELH- 77
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
H NIV L + L+ + ++ D K + Q++ V +C
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL- 242
H ++HRDLKP+N L +S D LK DFGL+ F P + V + +Y AP+VL
Sbjct: 136 HQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL------------------- 282
+ Y DIWS G I +++G P F G T+ I
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 283 ---RGHIDFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
R F PW P D++ ML DP +R+SA + +NHP+ +
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 28/281 (9%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
R+ + + +GRG F +V K T Q +A K ++ ++ R +V R E ++ +
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-G 118
Query: 126 GHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVV 181
R I +L A++D + + L+M+ GG+L +++K + ER A + R ++V +
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAI 175
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV--GSAYYVAP 239
H +G +HRD+KP+N L ++ DFG + + + LV G+ Y++P
Sbjct: 176 DSVHRLGYVHRDIKPDNILLDRCGH---IRLADFGSCLKLRADGTVRSLVAVGTPDYLSP 232
Query: 240 EVLR--------RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
E+L+ +YG E D W+ GV Y + G PF+ ++ + I+ + + S
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH-YKEHLSL 291
Query: 292 PWPN--ISSSAKDIVKKMLHADPKERL---SAAEVLNHPWM 327
P + + A+D ++++L P+ RL A + HP+
Sbjct: 292 PLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFF 331
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 122/293 (41%), Gaps = 53/293 (18%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQF-ACKSISSRKLINRDDVED------VRREVQIMHHLTG 126
++G G +GV Y KD++ + A K I R D ED RE+ ++ L
Sbjct: 28 KVGEGTYGVVY--KAKDSQGRIVALKRI-------RLDAEDEGIPSTAIREISLLKELH- 77
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYC 184
H NIV L + L+ + ++ D K + Q++ V +C
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 185 HSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL- 242
H ++HRDLKP+N L +S D LK DFGL+ F P + V + +Y AP+VL
Sbjct: 136 HQHRILHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL------------------- 282
+ Y DIWS G I +++G P F G T+ I
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252
Query: 283 ---RGHIDFSSDPW----PNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
R F PW P D++ ML DP +R+SA + +NHP+ +
Sbjct: 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------- 285
R G ++D+WS G ILY + G PF Q I + I + H
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 285
Query: 286 -IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F P ++ +D++K L DPK+R+S E+L HP++++
Sbjct: 286 EIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 51/374 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 84
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 139
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 249
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 250 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 302
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 303 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 359
Query: 411 VRQLMEAADVDGNG 424
R + AA N
Sbjct: 360 AR-IQAAASTPTNA 372
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSS 290
R G ++D+WS G ILY + G PF Q I + I + H ID +
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 285
Query: 291 D-PWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +P+I +D++K L DPK+R+S E+L HP++++
Sbjct: 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+ ++E F DTD SGTI +ELK + LG + E+++++ D DG+GTI
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 427 DYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIK 483
D+ EF+ T M + E + KAF FD D +G I+ + L+ K+ NM D + ++
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEE-LQ 120
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
E+I E D D DG +N EEF +M+K
Sbjct: 121 EMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 175 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------- 285
R G ++D+WS G ILY + G PF Q I + I + H
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 285
Query: 286 -IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F P ++ +D++K L DPK+R+S E+L HP++++
Sbjct: 286 EIEFPDIPEKDL----QDVLKCCLKRDPKQRISIPELLAHPYVQI 326
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 85
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 140
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 198
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 199 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 251
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 252 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 303
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 304 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 360
Query: 411 VRQLMEAADVDGN 423
R + AA N
Sbjct: 361 AR-IQAAASTPTN 372
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 80
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 135
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 193
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 194 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 246
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 247 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 298
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 299 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 355
Query: 411 VRQLMEAADVDGN 423
R + AA N
Sbjct: 356 AR-IQAAASTPTN 367
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRR 116
P D + Y ++G+G FG + H+ T Q+ A K K++ ++ E R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 117 EVQIMHHLTGHRNIVEL------KGAYEDRH--SVNLIMDLC----AGGELFDRIIAKGH 164
E++I+ L H N+V L K + +R S+ L+ D C AG L ++ K
Sbjct: 67 EIKILQ-LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFT 123
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE + + ++ ++Y H ++HRD+K N L + D LK DFGL+ F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 225 -----DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 238
Query: 278 FDAILRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLH 309
I + + + WPN+ + A D++ K+L
Sbjct: 239 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 298
Query: 310 ADPKERLSAAEVLNHPWMRVDGDASD 335
DP +R+ + + LNH + D SD
Sbjct: 299 LDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 426 IDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTI 482
I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L + DA+ +
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAE-V 121
Query: 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508
+++ EV D G IN ++FAA++ K
Sbjct: 122 DDMLREVS-DGSGEINIQQFAALLSK 146
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 91
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 146
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 204
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 205 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 257
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 258 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 309
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 310 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 366
Query: 411 VRQLMEAADVDGN 423
R + AA N
Sbjct: 367 AR-IQAAASTPTN 378
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSS 290
R G ++D+WS G ILY + G PF Q I + I + H ID +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 257
Query: 291 D-PWPNISSS-AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +P+I +D++K L DPK+R+S E+L HP++++
Sbjct: 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 68
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 69 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 128 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSS 290
R G ++D+WS G ILY + G PF Q I + I + H ID +
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 238
Query: 291 D-PWPNISSS-AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +P+I +D++K L DPK+R+S E+L HP++++
Sbjct: 239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 84
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 139
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 197
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 198 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 249
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 250 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 302
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 303 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 359
Query: 411 VRQLMEAADVDGN 423
R + AA N
Sbjct: 360 AR-IQAAASTPTN 371
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 156/362 (43%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 237
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P + ++ HPW +V + P IA+ +R+ ++
Sbjct: 238 ---VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVVAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D+ LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS GVI+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 40/285 (14%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 71
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 72 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 131 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH------- 285
R G ++D+WS G ILY + G PF Q I + I + H
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 241
Query: 286 -IDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F P +D++K L DPK+R+S E+L HP++++
Sbjct: 242 EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 282
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRR 116
P D + Y ++G+G FG + H+ T Q+ A K K++ ++ E R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 117 EVQIMHHLTGHRNIVEL------KGAYEDR--HSVNLIMDLC----AGGELFDRIIAKGH 164
E++I+ L H N+V L K + +R S+ L+ D C AG L ++ K
Sbjct: 67 EIKILQ-LLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAG--LLSNVLVKFT 123
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE + + ++ ++Y H ++HRD+K N L + D LK DFGL+ F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 225 -----DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 238
Query: 278 FDAILRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLH 309
I + + + WPN+ + A D++ K+L
Sbjct: 239 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 298
Query: 310 ADPKERLSAAEVLNHPWMRVDGDASD 335
DP +R+ + + LNH + D SD
Sbjct: 299 LDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 67
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 68 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 127 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSS 290
R G ++D+WS G ILY + G PF Q I + I + H ID +
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 237
Query: 291 D-PWPNISSS-AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +P+I +D++K L DPK+R+S E+L HP++++
Sbjct: 238 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 278
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 121/277 (43%), Gaps = 48/277 (17%)
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
SR N+ + RE+ ++ H+NI+ L + + ++ D+ EL D +
Sbjct: 58 SRPFQNQTHAKRAYREL-VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 116
Query: 162 KGHYSE---RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ + E + L QM+ + + HS G++HRDLKP N + S D LK DFGL+
Sbjct: 117 QVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
Query: 219 VFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----- 272
+ V + YY APEV L Y A DIWS G I+ L+ G F G
Sbjct: 174 RTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQ 233
Query: 273 ---------TEQSIFDAIL----RGHIDFSSDPWPNI---------------------SS 298
T + F A L R +++ + +P I +S
Sbjct: 234 WNKVIEQLGTPSAEFMAALQPTVRNYVE-NRPKYPGIKFEELFPDWIFPSESERDKIKTS 292
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
A+D++ KML DP +R+S E L HP++ V D ++
Sbjct: 293 QARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 329
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y +++G G + V + + KQ +A K ++ + N+ ++ R E+ ++ L H
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 129 N-IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM 187
+ I+ L + ++M+ C +L + K + + M+ VH H
Sbjct: 88 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP--GDVFKD-LVGSAYYVAPEVLR- 243
G++H DLKP NFL D LK DFG++ +P V KD VG+ Y+ PE ++
Sbjct: 147 GIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 244 ----RNYG-------AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH--IDFSS 290
R G ++D+WS G ILY + G PF Q I + I + H ID +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-----QQIINQISKLHAIIDPNH 257
Query: 291 D-PWPNISSS-AKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
+ +P+I +D++K L DPK+R+S E+L HP++++
Sbjct: 258 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 298
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRR 116
P D + Y ++G+G FG + H+ T Q+ A K K++ ++ E R
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 66
Query: 117 EVQIMHHLTGHRNIVEL------KGAYEDRH--SVNLIMDLC----AGGELFDRIIAKGH 164
E++I+ L H N+V L K + +R S+ L+ D C AG L ++ K
Sbjct: 67 EIKILQ-LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFT 123
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE + + ++ ++Y H ++HRD+K N L + D LK DFGL+ F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 225 -----DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 179 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 238
Query: 278 FDAILRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLH 309
I + + + WPN+ + A D++ K+L
Sbjct: 239 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 298
Query: 310 ADPKERLSAAEVLNHPWMRVDGDASD 335
DP +R+ + + LNH + D SD
Sbjct: 299 LDPAQRIDSDDALNHDFFWSDPMPSD 324
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 141/326 (43%), Gaps = 64/326 (19%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE----DVRR 116
P D + Y ++G+G FG + H+ T Q+ A K K++ ++ E R
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK-----KVLMENEKEGFPITALR 65
Query: 117 EVQIMHHLTGHRNIVEL------KGAYEDRH--SVNLIMDLC----AGGELFDRIIAKGH 164
E++I+ L H N+V L K + +R S+ L+ D C AG L ++ K
Sbjct: 66 EIKILQ-LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFT 122
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
SE + + ++ ++Y H ++HRD+K N L + D LK DFGL+ F
Sbjct: 123 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 177
Query: 225 -----DVFKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ + + V + +Y PE+L R+YG D+W AG I+ + + P G TEQ
Sbjct: 178 KNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ 237
Query: 278 FDAILRGHIDFSSDPWPNISS----------------------------SAKDIVKKMLH 309
I + + + WPN+ + A D++ K+L
Sbjct: 238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLV 297
Query: 310 ADPKERLSAAEVLNHPWMRVDGDASD 335
DP +R+ + + LNH + D SD
Sbjct: 298 LDPAQRIDSDDALNHDFFWSDPMPSD 323
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 237
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 238 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D+ LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS GVI+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 238
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 239 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 76
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 131
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 189
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 190 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 241
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 242 ---VLGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 294
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 295 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 351
Query: 411 VR 412
R
Sbjct: 352 AR 353
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 238
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 239 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 73
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 128
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 186
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 187 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 239
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 240 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 291
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 292 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 348
Query: 411 VR 412
R
Sbjct: 349 AR 350
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 238
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 239 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LGRG FG + K T + +ACK ++ ++L R + E +I+ + R IV
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVS 249
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG 188
L A+E + + L+M + GG++ I + E A Q+V+ + + H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLR-RNY 246
+++RDLKPEN L +D ++ +D GL+V K G K G+ ++APE+L Y
Sbjct: 310 IIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
D ++ GV LY +++ PF E+ + + L+ + + +P+ S ++KD +
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 306 KMLHADPKERL-----SAAEVLNHPWMRVDGDASDKPLDIAVLT 344
+L DP++RL S + HP R D S + L+ +LT
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR---DISWRQLEAGMLT 466
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LGRG FG + K T + +ACK ++ ++L R + E +I+ + R IV
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVS 249
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG 188
L A+E + + L+M + GG++ I + E A Q+V+ + + H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLR-RNY 246
+++RDLKPEN L +D ++ +D GL+V K G K G+ ++APE+L Y
Sbjct: 310 IIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
D ++ GV LY +++ PF E+ + + L+ + + +P+ S ++KD +
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 306 KMLHADPKERL-----SAAEVLNHPWMRVDGDASDKPLDIAVLT 344
+L DP++RL S + HP R D S + L+ +LT
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR---DISWRQLEAGMLT 466
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LGRG FG + K T + +ACK ++ ++L R + E +I+ + R IV
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVS 249
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG 188
L A+E + + L+M + GG++ I + E A Q+V+ + + H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLR-RNY 246
+++RDLKPEN L +D ++ +D GL+V K G K G+ ++APE+L Y
Sbjct: 310 IIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
D ++ GV LY +++ PF E+ + + L+ + + +P+ S ++KD +
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 306 KMLHADPKERL-----SAAEVLNHPWMRVDGDASDKPLDIAVLT 344
+L DP++RL S + HP R D S + L+ +LT
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR---DISWRQLEAGMLT 466
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 20/284 (7%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R LGRG FG + K T + +ACK ++ ++L R + E +I+ + R IV
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH-SRFIVS 249
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIA----KGHYSERAAANLCRQMVTVVHYCHSMG 188
L A+E + + L+M + GG++ I + E A Q+V+ + + H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV-FKDLVGSAYYVAPEVLR-RNY 246
+++RDLKPEN L +D ++ +D GL+V K G K G+ ++APE+L Y
Sbjct: 310 IIYRDLKPENVLLD---DDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN-ISSSAKDIVK 305
D ++ GV LY +++ PF E+ + + L+ + + +P+ S ++KD +
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCE 425
Query: 306 KMLHADPKERL-----SAAEVLNHPWMRVDGDASDKPLDIAVLT 344
+L DP++RL S + HP R D S + L+ +LT
Sbjct: 426 ALLQKDPEKRLGFRDGSCDGLRTHPLFR---DISWRQLEAGMLT 466
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 156/362 (43%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D +A+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VAR-HYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK-------- 237
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P + ++ HPW +V + P IA+ +R+ ++
Sbjct: 238 ---VLGTPTREQIREM---NPNYTEFAFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
+Y + +G G FGV Y D+ + A K + K RE+QIM L H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-------RELQIMRKL-DH 72
Query: 128 RNIVELK------GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-------- 173
NIV L+ G +D +NL++D E R+ HYS RA L
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVP--ETVYRV--ARHYS-RAKQTLPVIYVKLY 127
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
Q+ + Y HS G+ HRD+KP+N L + + LK DFG + G+ + S
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
Query: 234 AYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSD 291
YY APE++ +Y + D+WSAG +L LL G P F G++ I++
Sbjct: 186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV------- 238
Query: 292 PWPNISSSAKDIVKKMLHADPK-ERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFR 350
+ + ++ +++M +P ++ HPW +V + P IA+ +R+ ++
Sbjct: 239 ----LGTPTREQIREM---NPNYTEFKFPQIKAHPWTKVFRPRT-PPEAIALCSRLLEYT 290
Query: 351 AMNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+L L+ A + +E ++ DT T +EL + P L T L
Sbjct: 291 PTARL--TPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSN-PPLATILIPPH 347
Query: 411 VR 412
R
Sbjct: 348 AR 349
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 27/258 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LGRG FG + + K T Q A K + R + R + E+ LT R IV L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV--RLEVFRAE------ELMACAGLTSPR-IVPLY 132
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
GA + VN+ M+L GG L + +G E A Q + + Y HS ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV------GSAYYVAPE-VLRRNYG 247
K +N L SS + L DFG +V +P + KDL+ G+ ++APE VL R+
Sbjct: 193 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI---- 303
A+ D+WS+ ++ +L+G P+ F L I P I S +
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA 305
Query: 304 VKKMLHADPKERLSAAEV 321
+++ L +P R+SAAE+
Sbjct: 306 IQEGLRKEPIHRVSAAEL 323
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLVGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D+ LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-VVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D+ LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 49/300 (16%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT 125
++ Y R+LGRG++ + + ++ K + K ++RE++I+ +L
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KNKIKREIKILENLR 89
Query: 126 GHRNIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
G NI+ L +D + L+ + + Y R +++ + Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF---YMYEILKALDY 146
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL- 242
CHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+ PE+L
Sbjct: 147 CHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
Query: 243 -RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFDAILRGHID 287
+ Y D+WS G +L ++ PF+ + + ++D I + +I+
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 264
Query: 288 F-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
S W +S A D + K+L D + RL+A E + HP+
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 48/277 (17%)
Query: 102 SRKLINRDDVEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA 161
SR N+ + RE+ ++ H+NI+ L + + ++ D+ EL D +
Sbjct: 56 SRPFQNQTHAKRAYREL-VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC 114
Query: 162 KGHYSE---RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ + E + L QM+ + + HS G++HRDLKP N + S D LK DFGL+
Sbjct: 115 QVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 171
Query: 219 VFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGE----- 272
+ V + YY APEV L Y DIWS G I+ L+ G F G
Sbjct: 172 RTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 231
Query: 273 ---------TEQSIFDAIL----RGHIDFSSDPWPNI---------------------SS 298
T + F A L R +++ + +P I +S
Sbjct: 232 WNKVIEQLGTPSAEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTS 290
Query: 299 SAKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASD 335
A+D++ KML DP +R+S E L HP++ V D ++
Sbjct: 291 QARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAE 327
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 46/301 (15%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G G +G +Q+ A K +S R + RE++++ HL H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 133 LKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
L + ED V L+ L G + I+ S+ L Q++ + Y HS
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-- 244
G++HRDLKP N + EDS L+ DFGL+ + + V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAVN---EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIFDAILRGH 285
+Y DIWS G I+ LL G F G E I R +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 286 IDFSSDPWPNISSS---------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
I S P P S A D++ +ML D +R+SAAE L H + D D+
Sbjct: 265 IQ-SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
Query: 337 P 337
P
Sbjct: 324 P 324
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 131/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D+ LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 62
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + + D G + L Q++ + +CH
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKPEN L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 SHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + + D G + L Q++ + +CH
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKPEN L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 SHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 125/303 (41%), Gaps = 61/303 (20%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQIMHHLT--GH 127
R G+G FG L K T A K + ++D R RE+QIM L H
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQDLAVLHH 78
Query: 128 RNIVELKGAY-----EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAAN------LCRQ 176
NIV+L+ + DR + L + + + R + +Y + A Q
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC-CRNYYRRQVAPPPILIKVFLFQ 137
Query: 177 MVTVVHYCH--SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA 234
++ + H S+ V HRD+KP N L + + D LK DFG + P + + S
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVAYICSR 195
Query: 235 YYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR--------- 283
YY APE++ ++Y DIWS G I ++ G P F G+ I+R
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255
Query: 284 ------GHID---FSSD--PWPNISS--------SAKDIVKKMLHADPKERLSAAEVLNH 324
H D ++S PW N+ S A D++ +L P+ER+ E L H
Sbjct: 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315
Query: 325 PWM 327
P+
Sbjct: 316 PYF 318
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAI--- 281
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVENR 263
Query: 282 ----------LRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
L + F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 32 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 89
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 148
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 149 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYK 205
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 206 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 265
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 266 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 325
Query: 330 DGDASD 335
D S+
Sbjct: 326 WYDPSE 331
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 46/301 (15%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G G +G +Q+ A K +S R + RE++++ HL H N++
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 91
Query: 133 LKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
L + ED V L+ L G + I+ S+ L Q++ + Y HS
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-- 244
G++HRDLKP N + EDS L+ DFGL+ + + V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNVAVN---EDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIFDAILRGH 285
+Y DIWS G I+ LL G F G E I R +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 286 IDFSSDPWPNISSS---------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
I S P P S A D++ +ML D +R+SAAE L H + D D+
Sbjct: 265 IQ-SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 323
Query: 337 P 337
P
Sbjct: 324 P 324
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 88
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 147
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 148 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 205 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 264
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 265 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324
Query: 330 DGDASD 335
D S+
Sbjct: 325 WYDPSE 330
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVILYILLSGVPPF--------WGETEQSI----------FDAILRGHID-- 287
DIWS G I+ ++ G F W + + + +R +++
Sbjct: 204 ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 288 ----------------FSSDPWPNI--SSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 63
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKPEN L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 SHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 62
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKPEN L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 SHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKPEN L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 119/258 (46%), Gaps = 27/258 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LGRG FG + + K T Q A K + R + R + E+ LT R IV L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV--RLEVFRAE------ELMACAGLTSPR-IVPLY 151
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
GA + VN+ M+L GG L + +G E A Q + + Y HS ++H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV------GSAYYVAPE-VLRRNYG 247
K +N L SS + L DFG +V +P + K L+ G+ ++APE VL R+
Sbjct: 212 KADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 248 AEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDI---- 303
A+ D+WS+ ++ +L+G P+ F L I P I S +
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQA 324
Query: 304 VKKMLHADPKERLSAAEV 321
+++ L +P R+SAAE+
Sbjct: 325 IQEGLRKEPIHRVSAAEL 342
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + + D G + L Q++ + +CH
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 63
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + + D G + L Q++ + +CH
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 54/309 (17%)
Query: 58 LGKP--MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-- 113
LG P ME+ + ++G G +GV Y +K T + A K I R D E
Sbjct: 3 LGSPEFMENFQKV----EKIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEG 51
Query: 114 ----VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSE 167
RE+ ++ L H NIV+L + + L+ + + D G
Sbjct: 52 VPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDV 226
+ L Q++ + +CHS V+HRDLKP+N L ++ + +K DFGL+ F P
Sbjct: 111 LIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRT 166
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
+ V + +Y APE+L + Y DIWS G I +++ F G++E I R
Sbjct: 167 YTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 285 HIDFSSDPWPNISS-------------------------SAKDIVKKMLHADPKERLSAA 319
WP ++S + ++ +MLH DP +R+SA
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 320 EVLNHPWMR 328
L HP+ +
Sbjct: 287 AALAHPFFQ 295
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 26/293 (8%)
Query: 68 TYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVE-DVRREVQIMHHLTG 126
TYI +LG G + Y K T A K I +L + + REV ++ L
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK- 58
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCH 185
H NIV L S+ L+ + +L + G+ L Q++ + YCH
Sbjct: 59 HANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL-- 242
V+HRDLKP+N L + E LK DFGL+ P + + V + +Y P++L
Sbjct: 118 RQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
+Y + D+W G I Y + +G P F G T + I R + + WP I S+ +
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKL 355
+ PK R A +L+H R+D D +D +LT++ QF N++
Sbjct: 235 KT----YNYPKYR--AEALLSHA-PRLDSDGAD------LLTKLLQFEGRNRI 274
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 130/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 VDGDASD 335
V D ++
Sbjct: 323 VWYDPAE 329
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 88
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 147
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 148 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 263
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 329 VDGDASD 335
V D ++
Sbjct: 324 VWYDPAE 330
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVL-- 242
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 243 RRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 31 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 88
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 89 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 147
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 148 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 204
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 263
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 329 VDGDASD 335
V D ++
Sbjct: 324 VWYDPAE 330
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 86
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 145
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 146 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 202
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 261
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 329 VDGDASD 335
V D ++
Sbjct: 322 VWYDPAE 328
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 80
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 139
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 255
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 329 VDGDASD 335
V D ++
Sbjct: 316 VWYDPAE 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 125
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 184
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 185 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 300
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 329 VDGDASD 335
V D ++
Sbjct: 361 VWYDPAE 367
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 VDGDASD 335
V D ++
Sbjct: 323 VWYDPAE 329
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 125
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 184
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 185 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 241
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 300
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 329 VDGDASD 335
V D ++
Sbjct: 361 VWYDPAE 367
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 81
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 140
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 141 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 256
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 329 VDGDASD 335
V D ++
Sbjct: 317 VWYDPAE 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 VDGDASD 335
V D ++
Sbjct: 323 VWYDPAE 329
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 81
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 140
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 141 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 256
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 329 VDGDASD 335
V D ++
Sbjct: 317 VWYDPAE 323
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 VDGDASD 335
V D ++
Sbjct: 323 VWYDPAE 329
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 54/309 (17%)
Query: 58 LGKP--MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED-- 113
LG P ME+ + ++G G +GV Y +K T + A K I R D E
Sbjct: 3 LGSPEFMENFQKV----EKIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEG 51
Query: 114 ----VRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSE 167
RE+ ++ L H NIV+L + + L+ + + D G
Sbjct: 52 VPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 110
Query: 168 RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDV 226
+ L Q++ + +CHS V+HRDLKP+N L ++ + +K DFGL+ F P
Sbjct: 111 LIKSYLF-QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRT 166
Query: 227 FKDLVGSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
+ V + +Y APE+L + Y DIWS G I +++ F G++E I R
Sbjct: 167 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT 226
Query: 285 HIDFSSDPWPNISS-------------------------SAKDIVKKMLHADPKERLSAA 319
WP ++S + ++ +MLH DP +R+SA
Sbjct: 227 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 286
Query: 320 EVLNHPWMR 328
L HP+ +
Sbjct: 287 AALAHPFFQ 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLSFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMD-LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
NIV+L + + L+ + L + F A + Q++ + +CHS
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-- 243
V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS----- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 299 --------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 129/304 (42%), Gaps = 49/304 (16%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------V 114
P+ D+ N + ++G G +GV Y +K T + A K I R D E
Sbjct: 2 PLVDMEN-FQKVEKIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTA 53
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAAN 172
RE+ ++ L H NIV+L + + L+ + + D G +
Sbjct: 54 IREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 112
Query: 173 LCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLV 231
L Q++ + +CHS V+HRDLKP+N L ++ + +K DFGL+ F P + V
Sbjct: 113 LF-QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEV 168
Query: 232 GSAYYVAPEVLR--RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE+L + Y DIWS G I +++ F G++E I R
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 228
Query: 290 SDPWPNISS-------------------------SAKDIVKKMLHADPKERLSAAEVLNH 324
WP ++S + ++ +MLH DP +R+SA L H
Sbjct: 229 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 288
Query: 325 PWMR 328
P+ +
Sbjct: 289 PFFQ 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 62
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 129/307 (42%), Gaps = 51/307 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M H+NI+
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIS 80
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLXGIKHLHSAG 139
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 140 IIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 196
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 255
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 329 VDGDASD 335
V D ++
Sbjct: 316 VWYDPAE 322
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 VDGDAS 334
V D +
Sbjct: 323 VWYDPA 328
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 62
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 129/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 35 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 92
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 151
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 152 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 208
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAI--- 281
D+WS G I+ IL G P F + + ++ +
Sbjct: 209 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 268
Query: 282 ----------LRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
L + F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 269 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 328
Query: 330 DGDASD 335
D S+
Sbjct: 329 WYDPSE 334
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 63
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 63
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 122
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 123 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 62
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 121
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 122 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 65
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 124
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 125 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 129/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 24 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 81
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 140
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 141 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 197
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAI--- 281
D+WS G I+ IL G P F + + ++ +
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 257
Query: 282 ----------LRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
L + F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 258 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 317
Query: 330 DGDASD 335
D S+
Sbjct: 318 WYDPSE 323
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 40/281 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + + +RKLI+ + +R RE+Q++H
Sbjct: 32 ELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 84
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 143
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 144 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 195
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFW-GETEQSIFDAILRGHIDF-SSDPWPNISSSA 300
+Y ++DIWS G+ L + G P G +IF+ +D+ ++P P + S
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFEL-----LDYIVNEPPPKLPSGV 250
Query: 301 -----KDIVKKMLHADPKERLSAAEVLNHPWM-RVDGDASD 335
+D V K L +P ER +++ H ++ R D + D
Sbjct: 251 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 291
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG H+DT +Q A K R+ ++ + E E+QIM L H N+V +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLN-HPNVVSAR 79
Query: 135 GAYEDRHSVN------LIMDLCAGGEL---FDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
+ + L M+ C GG+L ++ E L + + + Y H
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RR 244
++HRDLKPEN + + K D G + G++ + VG+ Y+APE+L ++
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 199
Query: 245 NYGAEADIWSAGVILYILLSGVPPF 269
Y D WS G + + ++G PF
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 51/301 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ + A K +S R N+ + RE+ +M + H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRNVAIKKLS-RPFQNQTHAKRAYRELVLMKXV-NHKNIIS 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + ++ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAILRG 284
DIWS G I+ IL G P F + + ++ + +
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV-EN 262
Query: 285 HIDFSSDPWPNI----------------SSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
++ +P + +S A+D++ KML DP +R+S + L HP++
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 329 V 329
V
Sbjct: 323 V 323
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R +G G +G +Q+ A K +S R + RE++++ HL H N++
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLS-RPFQSLIHARRTYRELRLLKHLK-HENVIG 83
Query: 133 LKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
L + ED V L+ L G + I+ S+ L Q++ + Y HS
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR-- 244
G++HRDLKP N + ED L+ DFGL+ + + V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNVAVN---EDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWG-------------------ETEQSIFDAILRGH 285
+Y DIWS G I+ LL G F G E I R +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 286 IDFSSDPWPNISSS---------AKDIVKKMLHADPKERLSAAEVLNHPWMRVDGDASDK 336
I S P P S A D++ +ML D +R+SAAE L H + D D+
Sbjct: 257 IQ-SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE 315
Query: 337 P 337
P
Sbjct: 316 P 316
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 13/205 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG G FG H+DT +Q A K R+ ++ + E E+QIM L H N+V +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLN-HPNVVSAR 78
Query: 135 GAYEDRHSVN------LIMDLCAGGEL---FDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
+ + L M+ C GG+L ++ E L + + + Y H
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-RR 244
++HRDLKPEN + + K D G + G++ + VG+ Y+APE+L ++
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
Query: 245 NYGAEADIWSAGVILYILLSGVPPF 269
Y D WS G + + ++G PF
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 130/306 (42%), Gaps = 49/306 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G G G+ ++ A K +S R N+ + RE+ +M H+NI+
Sbjct: 30 KPIGSGAQGIVCAAYDAILERNVAIKKLS-RPFQNQTHAKRAYRELVLMK-CVNHKNIIG 87
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFD----RIIAKGHYSERAAANLCRQMVTVVHYCHSMG 188
L + + S+ D+ EL D ++I ER + L QM+ + + HS G
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 146
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEV-LRRNYG 247
++HRDLKP N + S D LK DFGL+ + + V + YY APEV L Y
Sbjct: 147 IIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYK 203
Query: 248 AEADIWSAGVIL------YILLSG-----------------VPPFWGETEQSIFDAI--- 281
D+WS G I+ IL G P F + + ++ +
Sbjct: 204 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR 263
Query: 282 ----------LRGHIDFSSDPWPN--ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
L + F +D N +S A+D++ KML D +R+S E L HP++ V
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323
Query: 330 DGDASD 335
D S+
Sbjct: 324 WYDPSE 329
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 54/318 (16%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV----EDVRREVQ 119
DV + Y +G G +GV + T QQ A K K+ N DV + RE++
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELK 105
Query: 120 IMHHLTGHRNIVELKG------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
I+ H H NI+ +K Y + SV +++DL +L I + +
Sbjct: 106 ILKHFK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 163
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGD---VFK 228
Q++ + Y HS V+HRDLKP N L + + E LK DFG++ + P +
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQYFMT 220
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF---------------WG 271
+ V + +Y APE++ Y D+WS G I +L+ F G
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 280
Query: 272 ETEQSIFDAI----LRGHIDF----SSDPW----PNISSSAKDIVKKMLHADPKERLSAA 319
++ A+ +R +I PW P A ++ +ML +P R+SAA
Sbjct: 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340
Query: 320 EVLNHPWMRVDGDASDKP 337
L HP++ D D+P
Sbjct: 341 AALRHPFLAKYHDPDDEP 358
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 123/290 (42%), Gaps = 46/290 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMD-LCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
NIV+L + + L+ + + + F A + Q++ + +CHS
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 187 MGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR-- 243
V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 HRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS----- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237
Query: 299 --------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 135/276 (48%), Gaps = 34/276 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + + +RKLI+ + +R RE+Q++H
Sbjct: 16 ELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 68
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY 246
+MHRD+KP N L +S E +K DFG+S ++ + VG+ Y++PE L+ +Y
Sbjct: 128 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHY 183
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDF-SSDPWPNISSSA----- 300
++DIWS G+ L + G P +IF+ +D+ ++P P + S+
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP---RPPMAIFEL-----LDYIVNEPPPKLPSAVFSLEF 235
Query: 301 KDIVKKMLHADPKERLSAAEVLNHPWM-RVDGDASD 335
+D V K L +P ER +++ H ++ R D + D
Sbjct: 236 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 134/318 (42%), Gaps = 54/318 (16%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV----EDVRREVQ 119
DV + Y +G G +GV + T QQ A K K+ N DV + RE++
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-----KIPNAFDVVTNAKRTLRELK 106
Query: 120 IMHHLTGHRNIVELKG------AYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL 173
I+ H H NI+ +K Y + SV +++DL +L I + +
Sbjct: 107 ILKHFK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYF 164
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGD---VFK 228
Q++ + Y HS V+HRDLKP N L + + E LK DFG++ + P +
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQYFMT 221
Query: 229 DLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF---------------WG 271
+ V + +Y APE++ Y D+WS G I +L+ F G
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG 281
Query: 272 ETEQSIFDAI----LRGHIDF----SSDPW----PNISSSAKDIVKKMLHADPKERLSAA 319
++ A+ +R +I PW P A ++ +ML +P R+SAA
Sbjct: 282 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 341
Query: 320 EVLNHPWMRVDGDASDKP 337
L HP++ D D+P
Sbjct: 342 AALRHPFLAKYHDPDDEP 359
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A K I R D E RE+ ++ L H
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKI-------RLDTETEGVPSTAIREISLLKEL-NH 64
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 123
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 124 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A I R D E RE+ ++ L H
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKEL-NH 61
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 120
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 121 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVED------VRREVQIMHHLTGH 127
++G G +GV Y +K T + A I R D E RE+ ++ L H
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKI-------RLDTETEGVPSTAIREISLLKEL-NH 60
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAG--GELFDRIIAKGHYSERAAANLCRQMVTVVHYCH 185
NIV+L + + L+ + + D G + L Q++ + +CH
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLAFCH 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKDLVGSAYYVAPEVLR- 243
S V+HRDLKP+N L ++ + +K DFGL+ F P + V + +Y APE+L
Sbjct: 120 SHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 244 -RNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISS---- 298
+ Y DIWS G I +++ F G++E I R WP ++S
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 299 ---------------------SAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ ++ +MLH DP +R+SA L HP+ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 35/274 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + A RKLI+ + +R RE+Q++H
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHECNSPY- 65
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS 299
+Y ++DIWS G+ L + G +PP + + AI ++P P + S
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSG 236
Query: 300 A-----KDIVKKMLHADPKERLSAAEVLNHPWMR 328
+D V K L +P ER +++ H +++
Sbjct: 237 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 41/286 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH------- 127
LG+G FG + + +A K I + + + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 128 -----RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER-AAANLCRQMVTVV 181
RN V+ A + + ++ + M+ C G L+D I ++ +R L RQ++ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-------------PG--DV 226
Y HS G++HRDLKP N E +K DFGL+ PG D
Sbjct: 130 SYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILR 283
+G+A YVA EVL +Y + D++S G+I + + + PF E+ +I +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKLRS 243
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F D N K I++ ++ DP +R A +LN W+ V
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+I K+ F D + +G I EL + LG +E+E++ L+ A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 427 DYIEFI-TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---I 482
++ EF M + EE + +AF+ FD+D G+I+ EL + N+G+ T I
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVM--INLGEKVTDEEI 121
Query: 483 KEIIAEVDIDNDGRINYEEFAAMMRK 508
E+I E D D DG INYEEF M+ +
Sbjct: 122 DEMIREADFDGDGMINYEEFVWMISQ 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 358 VALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEA 417
+ K + E +EEE ++E FK D D G I+ EL+ + LG ++++ E+ +++
Sbjct: 71 IMAKQMRETDTEEE---MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIRE 127
Query: 418 ADVDGNGTIDYIEFI 432
AD DG+G I+Y EF+
Sbjct: 128 ADFDGDGMINYEEFV 142
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 39/206 (18%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHS G+MHRD+KP N + + L+ D+GL+ F+ P + V S Y
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRY 197
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 257
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
+ + HID S W N +S A D++ K+L D ++RL+A
Sbjct: 258 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 317
Query: 320 EVLNHPWMR-VDGDASDKPLDIAVLT 344
E + HP+ V + S D AVL+
Sbjct: 318 EAMEHPYFYPVVKEQSQPSADNAVLS 343
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY-VTKY 90
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 150 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 206
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 207 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 263
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 264 PSFRPTAKELLKHKFI 279
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 21/268 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG +GV + H + Q A K I R +N + + + ++ I V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 134 KGAYEDRHSVNLIMDL--CAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHS-MGV 189
GA V + M+L + + + ++I KG E + +V + + HS + V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYVAPEVL-----R 243
+HRD+KP N L ++ + +K DFG+S + DV KD+ G Y+APE + +
Sbjct: 132 IHRDVKPSNVLINALGQ---VKMCDFGISGYLV-DDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 244 RNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y ++DIWS G+ + L P+ WG Q + + +D S+
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFV 244
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + L + KER + E++ HP+ +
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQHPFFTL 272
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY-VTKY 85
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 145 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 202 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 258
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 259 PSFRPTAKELLKHKFI 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY-VTKY 70
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 130 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 243
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 244 PSFRPTAKELLKHKFI 259
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + EDS LK DFGL D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 12/256 (4%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G+G FG + T++ A K I + D++ED+++E+ ++ + +
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPY-VTKY 70
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRD 193
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 194 LKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEAD 251
+K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++AD
Sbjct: 130 IKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 252 IWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHAD 311
IWS G+ L G PP + I + + N S K+ V+ L+ +
Sbjct: 187 IWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKPLKEFVEACLNKE 243
Query: 312 PKERLSAAEVLNHPWM 327
P R +A E+L H ++
Sbjct: 244 PSFRPTAKELLKHKFI 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 28/258 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FGV K ++ K ++ +++ + + + E++ + + H NIV+L
Sbjct: 16 VGRGAFGVV-------CKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSM---G 188
GA + V L+M+ GG L++ + +Y+ A + C Q V Y HSM
Sbjct: 68 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV---GSAYYVAPEVLR-R 244
++HRDLKP N L + + LK DFG + D+ + GSA ++APEV
Sbjct: 126 LIHRDLKPPNLLLVAGG--TVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS 178
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
NY + D++S G+IL+ +++ PF E F + H N+ + ++
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 305 KKMLHADPKERLSAAEVL 322
+ DP +R S E++
Sbjct: 238 TRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 28/258 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FGV K ++ K ++ +++ + + + E++ + + H NIV+L
Sbjct: 17 VGRGAFGVV-------CKAKWRAKDVAIKQIESESERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHYCHSM---G 188
GA + V L+M+ GG L++ + +Y+ A + C Q V Y HSM
Sbjct: 69 GACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV---GSAYYVAPEVLR-R 244
++HRDLKP N L + + LK DFG + D+ + GSA ++APEV
Sbjct: 127 LIHRDLKPPNLLLVAGG--TVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS 179
Query: 245 NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
NY + D++S G+IL+ +++ PF E F + H N+ + ++
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPF-DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 305 KKMLHADPKERLSAAEVL 322
+ DP +R S E++
Sbjct: 239 TRCWSKDPSQRPSMEEIV 256
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 134/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + EDS LK DFGL+ D V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLAR--HTDDEMTGYV 185
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 134/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + EDS LK DFGL+ D V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLAR--HTDDEMTGYV 189
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 116 REVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA--AANL 173
REVQ++ H N++ +DR + ++LCA + + ++ L
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT--LQEYVEQKDFAHLGLEPITL 123
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKA--TDFGLSVFFKPG----DVF 227
+Q + + + HS+ ++HRDLKP N L S +KA +DFGL G
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 228 KDLVGSAYYVAPEVL----RRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
+ G+ ++APE+L + N DI+SAG + Y ++S G PF G++ Q + +L
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILL 242
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
P + A+++++KM+ DP++R SA VL HP+
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 136
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 323 NHPWMR 328
HP+ +
Sbjct: 315 THPYFQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 137
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 323 NHPWMR 328
HP+ +
Sbjct: 316 THPYFQ 321
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMAGFV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 136
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 323 NHPWMR 328
HP+ +
Sbjct: 315 THPYFQ 320
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + R +GRG FG Y DT + +A K + +K I E + +IM L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVS 247
Query: 127 HRN---IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL+
Sbjct: 308 MHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 244 RN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y + AD +S G +L+ LL G PF + + I R + + + + S +
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELR 422
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQ 124
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMAGFV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 12/255 (4%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG + T+Q A K I + D++ED+++E+ ++ + +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSSY-VTKYY 87
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G + E A + ++++ + Y HS +HRD+
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 146
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y ++ADI
Sbjct: 147 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADP 312
WS G+ L G PP + I + + + + S K+ + L+ DP
Sbjct: 204 WSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTLVGDFTKSFKEFIDACLNKDP 260
Query: 313 KERLSAAEVLNHPWM 327
R +A E+L H ++
Sbjct: 261 SFRPTAKELLKHKFI 275
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + R +GRG FG Y DT + +A K + +K I E + +IM L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVS 246
Query: 127 HRN---IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 306
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL+
Sbjct: 307 MHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 362
Query: 244 RN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y + AD +S G +L+ LL G PF + + I R + + + + S +
Sbjct: 363 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELR 421
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 422 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 453
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G+G FG Y TK+ A K I + D++ED+++E+ ++ I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSP-YITRYF 83
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
G+Y + +IM+ GG D ++ G E A + R+++ + Y HS +HRD+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD-LVGSAYYVAPEVLRRN-YGAEADI 252
K N L S E +K DFG++ + ++ VG+ +++APEV++++ Y +ADI
Sbjct: 143 KAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 253 WSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNI----SSSAKDIVKKML 308
WS G+ L G PP + I + + P P + S K+ V+ L
Sbjct: 200 WSLGITAIELAKGEPPNSDLHPMRVLFLIPK------NSP-PTLEGQHSKPFKEFVEACL 252
Query: 309 HADPKERLSAAEVLNHPWM 327
+ DP+ R +A E+L H ++
Sbjct: 253 NKDPRFRPTAKELLKHKFI 271
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + R +GRG FG Y DT + +A K + +K I E + +IM L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVS 247
Query: 127 HRN---IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL+
Sbjct: 308 MHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 244 RN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y + AD +S G +L+ LL G PF + + I R + + + + S +
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELR 422
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 16/272 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N + R +GRG FG Y DT + +A K + +K I E + +IM L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-KKRIKMKQGETLALNERIMLSLVS 247
Query: 127 HRN---IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHY 183
+ IV + A+ ++ I+DL GG+L + G +SE +++ + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 307
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR 243
H+ V++RDLKP N L E ++ +D GL+ F VG+ Y+APEVL+
Sbjct: 308 MHNRFVVYRDLKPANILLD---EHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQ 363
Query: 244 RN--YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y + AD +S G +L+ LL G PF + + I R + + + + S +
Sbjct: 364 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPELR 422
Query: 302 DIVKKMLHADPKERL-----SAAEVLNHPWMR 328
+++ +L D RL A EV P+ R
Sbjct: 423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 454
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 135
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 239 PEVL--RRNYGAEADIWSAGVILYILLSGVPPFW----------------GETEQSIFDA 280
PE+L ++Y D+WS G + ++ PF+ G +++
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 281 ILRGHID---------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
R +D S PW +S A D + K+L D +ERL+A E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 323 NHPWMR 328
HP+ +
Sbjct: 314 THPYFQ 319
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N L E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMAGFV 179
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHS G+MHRD+KP N + + L+ D+GL+ F+ P + V S Y
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVRVASRY 202
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYG 262
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
+ + HID S W N +S A D++ K+L D ++RL+A
Sbjct: 263 YLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAK 322
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 323 EAMEHPYF 330
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYV 190
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 123/286 (43%), Gaps = 41/286 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH------- 127
LG+G FG + + +A K I + + + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 128 -----RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER-AAANLCRQMVTVV 181
RN V+ A + + ++ + M+ C L+D I ++ +R L RQ++ +
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-------------PG--DV 226
Y HS G++HRDLKP N E +K DFGL+ PG D
Sbjct: 130 SYIHSQGIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILR 283
+G+A YVA EVL +Y + D++S G+I + + + PF E+ +I +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNILKKLRS 243
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F D N K I++ ++ DP +R A +LN W+ V
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 121 MHHLTGHRNIVELKGAYEDRHS--VNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV 178
+ +L G NIV+L D+HS +LI + + Y R +++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRY---YIYELL 156
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVA 238
+ YCHS G+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y+
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 239 PEVL--RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAI--------LRGHID 287
PE+L ++Y D+WS G + ++ P F+G I L +++
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 288 ----------------FSSDPWPN---------ISSSAKDIVKKMLHADPKERLSAAEVL 322
S PW +S A D + K+L D +ERL+A E +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 323 NHPWMR 328
HP+ +
Sbjct: 335 THPYFQ 340
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 39/206 (18%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWMR-VDGDASDKPLDIAVLT 344
E + HP+ V + S D AVL+
Sbjct: 317 EAMEHPYFYPVVKEQSQPCADNAVLS 342
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 91 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 202
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 263 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 203
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMXGXV 203
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYV 190
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTADEMTGYV 190
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 250 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 95 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 151
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMXGYV 206
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 139
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 194
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 23 LNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 81
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 82 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 138
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 139 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 193
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 253
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 254 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 314 AHAYFAQYHDPDDEPV 329
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 195
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 83
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 84 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 140
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 141 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 195
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 255
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 316 EAMEHPYF 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYV 188
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 124
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 20 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 78
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 79 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 135
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 136 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 190
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 250
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 134
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 24 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 82
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 83 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 139
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 140 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYV 194
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 254
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 194
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 254
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 255 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 314
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 315 EAMEHPYF 322
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 133
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 188
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 12 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 70
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 71 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 127
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 128 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 182
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 242
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 243 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 303 AHAYFAQYHDPDDEPV 318
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 130
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 33 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 91
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 92 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 148
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 149 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 203
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 263
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 264 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 36 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 94
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 95 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 151
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 152 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 206
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 266
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 195
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 316 EAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 317 EAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 38/188 (20%)
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY 235
+++ + YCHSMG+MHRD+KP N + E L+ D+GL+ F+ PG + V S Y
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRY 201
Query: 236 YVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPFWGETE--------------QSIFD 279
+ PE+L + Y D+WS G +L ++ PF+ + + ++D
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 261
Query: 280 AILRGHIDF-----------SSDPWPN---------ISSSAKDIVKKMLHADPKERLSAA 319
I + +I+ S W +S A D + K+L D + RL+A
Sbjct: 262 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 321
Query: 320 EVLNHPWM 327
E + HP+
Sbjct: 322 EAMEHPYF 329
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 116 REVQIMHHLTG--HRNIVEL----KGAYEDRHS-VNLIM-----DLCAGGELFDRIIAKG 163
REV ++ HL H N+V L + DR + + L+ DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 164 HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+E ++ Q++ + + HS V+HRDLKP+N L +SS + +K DFGL+ +
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSF 172
Query: 224 GDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIF 278
+V + +Y APEV L+ +Y D+WS G I + P F G ++ I
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 279 DAI-LRGHIDFSSD-PWP-----------------NISSSAKDIVKKMLHADPKERLSAA 319
D I L G D+ D P +I KD++ K L +P +R+SA
Sbjct: 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292
Query: 320 EVLNHPWMR 328
L+HP+ +
Sbjct: 293 SALSHPYFQ 301
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 133
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR--HTDDEMTGYV 188
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 131/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 32 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 90
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 91 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 147
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 148 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 202
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 262
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 263 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 18 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 76
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 77 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 133
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 134 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 188
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 248
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 15 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 73
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 74 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 130
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 131 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 185
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 245
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 136/315 (43%), Gaps = 44/315 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G + + A K +S R + + RE
Sbjct: 42 LNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLS-RPFQSIIHAKRTYRE 100
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 101 LRLLKHM-KHENVIGLLDVFTPATSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 157
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 158 FLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR--HTDDEMTGYV 212
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL------- 282
+ +Y APE++ +Y DIWS G I+ LL+G F G + I+
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPP 272
Query: 283 ------------RGHIDF--------SSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
R +I+ +D + + A D+++KML D +R++A+E L
Sbjct: 273 ASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 323 NHPWMRVDGDASDKP 337
HP+ D D+P
Sbjct: 333 AHPYFSQYHDPDDEP 347
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 116 REVQIMHHLTG--HRNIVEL----KGAYEDRHS-VNLIM-----DLCAGGELFDRIIAKG 163
REV ++ HL H N+V L + DR + + L+ DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 164 HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+E ++ Q++ + + HS V+HRDLKP+N L +SS + +K DFGL+ +
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSF 172
Query: 224 GDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIF 278
+V + +Y APEV L+ +Y D+WS G I + P F G ++ I
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 279 DAI-LRGHIDFSSD-PWP-----------------NISSSAKDIVKKMLHADPKERLSAA 319
D I L G D+ D P +I KD++ K L +P +R+SA
Sbjct: 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292
Query: 320 EVLNHPWMR 328
L+HP+ +
Sbjct: 293 SALSHPYFQ 301
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 19 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 77
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 78 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 134
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 135 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 189
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 249
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 125
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 180
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 11 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 69
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 70 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 126
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 127 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 181
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 241
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 242 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 302 AHAYFAQYHDPDDEPV 317
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGXV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 10 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 68
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 69 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 125
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 126 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 180
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 240
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 9 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 67
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 68 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 124
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D V
Sbjct: 125 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTGYV 179
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 240 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 116 REVQIMHHLTG--HRNIVEL----KGAYEDRHS-VNLIM-----DLCAGGELFDRIIAKG 163
REV ++ HL H N+V L + DR + + L+ DL D++ G
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT---YLDKVPEPG 116
Query: 164 HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
+E ++ Q++ + + HS V+HRDLKP+N L +SS + +K DFGL+ +
Sbjct: 117 VPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSF 172
Query: 224 GDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIF 278
+V + +Y APEV L+ +Y D+WS G I + P F G ++ I
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
Query: 279 DAI-LRGHIDFSSD-PWP-----------------NISSSAKDIVKKMLHADPKERLSAA 319
D I L G D+ D P +I KD++ K L +P +R+SA
Sbjct: 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292
Query: 320 EVLNHPWMR 328
L+HP+ +
Sbjct: 293 SALSHPYFQ 301
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EE+ ++E F D D +GTI +ELK + LG + E+++++ D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 428 YIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIKE 484
+ +F+T T M+ + +E + KAF+ FD D +G I+ + L+ K+ N+ D + ++E
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-LQE 119
Query: 485 IIAEVDIDNDGRINYEEFAAMMRK 508
+I E D D DG ++ +EF +M+K
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
NL+EE+I KE F D DN+G+I+ EL + LG SE+EV LM DVDGN
Sbjct: 3 NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 426 IDYIEFIT-ATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHAL 471
I++ EF+ + + + E+ L +AF+ FDK+ G I+ EL+H L
Sbjct: 63 IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL 109
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 449 KAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAAMMR 507
+AF FDKDN+G I+ EL ++ + ++ + +++ E+D+D + +I + EF A+M
Sbjct: 14 EAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS 73
Query: 508 K 508
+
Sbjct: 74 R 74
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 50/284 (17%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRNIVEL 133
LGRG FGV + +K +A K I +L NR+ E V REV+ + L H IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE-HPGIVRY 68
Query: 134 KGAYEDRHSVNLI------------MDLCAGGELFDRIIAKGHYSER---AAANLCRQMV 178
A+ ++++ + M LC L D + + ER ++ Q+
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 179 TVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL----------SVFFKPGDVF- 227
V + HS G+MHRDLKP N F+ D +K DFGL P +
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 228 --KDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRG 284
VG+ Y++PE + N Y + DI+S G+IL+ LL PF + E+ +R
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER------VRT 236
Query: 285 HIDFSSDPWPNISSSAKD----IVKKMLHADPKERLSAAEVLNH 324
D + +P + + +V+ ML P ER A ++ +
Sbjct: 237 LTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
++M+ G L D + +G + + A + +++ H G++HRD+KP N L S++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT 152
Query: 205 AEDSPLKATDFGLS-VFFKPGDVFKD---LVGSAYYVAPEVLRRN-YGAEADIWSAGVIL 259
+ +K DFG++ G+ ++G+A Y++PE R + A +D++S G +L
Sbjct: 153 ---NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP------NISSSAKDIVKKMLHADPK 313
Y +L+G PPF G++ S+ +R DP P +S+ +V K L +P+
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 314 ERLSAAEVLNHPWMRV-DGDASDKP 337
R A + +RV +G+ + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 370 EEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYI 429
+EI L + FK +D DNSG+++ EE + LP+L V+++++ D DGNG +D+
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQ---QNPLVQRVIDIFDTDGNGEVDFK 58
Query: 430 EFITATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGDA---KTI 482
EFI + + ++E+ L AF +D D GYI+ EL LK N+ D + +
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 483 KEIIAEVDIDNDGRINYEEFAAMM 506
+ I D D DGRI++EEF A++
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVV 142
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 70
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + A + + + ++ RQ + Y H+ +
Sbjct: 71 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED+ +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 130 IHRDLKSNNIFLH---EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
Y ++D+++ G++LY L++G P+ I + + RG + P++S
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS------PDLSKVRS 240
Query: 302 DIVKKM 307
+ K+M
Sbjct: 241 NCPKRM 246
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 133/318 (41%), Gaps = 48/318 (15%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISS--RKLINRDDVEDVR 115
L K + +V Y +G G +G T + A K +S + +I+ +
Sbjct: 25 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIH---AKRTY 81
Query: 116 REVQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERA 169
RE++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 82 RELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDH 138
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
L Q++ + Y HS ++HRDLKP N + ED LK DFGL+ D
Sbjct: 139 VQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR--HTDDEMTG 193
Query: 230 LVGSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHID 287
V + +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 288 FSSDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAE 320
++ ISS A D+++KML D +R++AA+
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 321 VLNHPWMRVDGDASDKPL 338
L H + D D+P+
Sbjct: 314 ALAHAYFAQYHDPDDEPV 331
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 11/147 (7%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
+ +EI L + FK +D DNSG+++ EE + LP+L V+++++ D DGNG +
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQ---QNPLVQRVIDIFDTDGNGEV 56
Query: 427 DYIEFITATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGDA--- 479
D+ EFI + + ++E+ L AF +D D GYI+ EL LK N+ D
Sbjct: 57 DFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQ 116
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ + + I D D DGRI++EEF A++
Sbjct: 117 QIVDKTIINADKDGDGRISFEEFCAVV 143
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +EI L + FK +D DNSG+++ EE + LP+L V+++++ D DG
Sbjct: 10 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQN---PLVQRVIDIFDTDG 65
Query: 423 NGTIDYIEFITATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGD 478
NG +D+ EFI + + ++E+ L AF +D D GYI+ EL LK N+ D
Sbjct: 66 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 125
Query: 479 A---KTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ + + I D D DGRI++EEF A++
Sbjct: 126 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 363 IAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDG 422
+ + +EI L + FK +D DNSG+++ EE + LP+L V+++++ D DG
Sbjct: 11 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-LPELQQN---PLVQRVIDIFDTDG 66
Query: 423 NGTIDYIEFITATMHMN-RVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY---NMGD 478
NG +D+ EFI + + ++E+ L AF +D D GYI+ EL LK N+ D
Sbjct: 67 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKD 126
Query: 479 A---KTIKEIIAEVDIDNDGRINYEEFAAMM 506
+ + + I D D DGRI++EEF A++
Sbjct: 127 TQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 133/316 (42%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK D+GL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
++M+ G L D + +G + + A + +++ H G++HRD+KP N + S++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 205 AEDSPLKATDFGLS-VFFKPGDVFKD---LVGSAYYVAPEVLR-RNYGAEADIWSAGVIL 259
+ +K DFG++ G+ ++G+A Y++PE R + A +D++S G +L
Sbjct: 153 ---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP------NISSSAKDIVKKMLHADPK 313
Y +L+G PPF G++ S+ +R DP P +S+ +V K L +P+
Sbjct: 210 YEVLTGEPPFTGDSPDSVAYQHVR------EDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 314 ERLSAAEVLNHPWMRV-DGDASDKP 337
R A + +RV +G+ + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 127/310 (40%), Gaps = 46/310 (14%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
+VR Y + +G G +G T + A K + R + + RE++++ H
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-RPFQSELFAKRAYRELRLLKH 80
Query: 124 LTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQM 177
+ H N++ L + +D L+M G +++ E L QM
Sbjct: 81 MR-HENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQM 137
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYV 237
+ + Y H+ G++HRDLKP N + ED LK DFGL+ + V + +Y
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYR 192
Query: 238 APEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILR------------ 283
APEV+ Y DIWS G I+ +++G F G I++
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252
Query: 284 ----------------GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
DF+S N S A ++++KML D ++R++A E L HP+
Sbjct: 253 LQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
Query: 328 RVDGDASDKP 337
D D+P
Sbjct: 312 ESLHDTEDEP 321
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 72
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 132 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 245
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 246 TKCWAYDPSRRPRFTEL 262
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 74
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 75 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 133
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 134 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 191 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 247
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 248 TKCWAYDPSRRPRFTEL 264
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 100
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 101 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 159
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 160 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 217 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 273
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 274 TKCWAYDPSRRPRFTEL 290
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 77
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 78 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 137 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 194 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 250
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 251 TKCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 75
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 76 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 134
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 135 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 192 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 248
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 249 TKCWAYDPSRRPRFTEL 265
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 69
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 70 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 129 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 242
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 243 TKCWAYDPSRRPRFTEL 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 72
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + + A+ L Q+ T + Y S
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R
Sbjct: 132 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 245
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 246 TKCWAYDPSRRPRFTEL 262
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 26/246 (10%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 82
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + A + + + ++ RQ + Y H+ +
Sbjct: 83 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED+ +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
Y ++D+++ G++LY L++G P+ I + + RG + P++S
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS------PDLSKVRS 252
Query: 302 DIVKKM 307
+ K+M
Sbjct: 253 NCPKRM 258
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 19/267 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG +GV + H + Q A K I R +N + + + ++ I V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 134 KGAYEDRHSVNLIMDL--CAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHS-MGV 189
GA V + M+L + + + ++I KG E + +V + + HS + V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL-----RR 244
+HRD+KP N L ++ + +K DFG+S + G Y+APE + ++
Sbjct: 176 IHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 245 NYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
Y ++DIWS G+ + L P+ WG Q + + +D S+ D
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFVD 289
Query: 303 IVKKMLHADPKERLSAAEVLNHPWMRV 329
+ L + KER + E++ HP+ +
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPFFTL 316
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
++M+ G L D + +G + + A + +++ H G++HRD+KP N + S++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 205 AEDSPLKATDFGLS-VFFKPGDVFKD---LVGSAYYVAPEVLRRN-YGAEADIWSAGVIL 259
+ +K DFG++ G+ ++G+A Y++PE R + A +D++S G +L
Sbjct: 153 ---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP------NISSSAKDIVKKMLHADPK 313
Y +L+G PPF G++ S+ +R DP P +S+ +V K L +P+
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 314 ERLSAAEVLNHPWMRV-DGDASDKP 337
R A + +RV +G+ + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 123/331 (37%), Gaps = 71/331 (21%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P + V Y + +G+G FG Q A K + + K +R E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 121 MHHLTGH-----RNIVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANL 173
+ HL N++ + + R+ + + +L + EL + +G +S
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
++ + H ++H DLKPEN L S +K DFG S + + V+ + S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY-EHQRVYTX-IQS 262
Query: 234 AYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSI 277
+Y APEV L YG D+WS G IL LL+G P GE E Q +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 278 FDAILRGHIDFSSDPWPNISSSAK------------------------------------ 301
DA R S +P +
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 302 ----DIVKKMLHADPKERLSAAEVLNHPWMR 328
D +K+ L DP R++ + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G + HK T FA K ++ + DV+ RE +++ L H+NIV+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 135 GAYED---RHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMG 188
E+ RH V LIM+ C G L+ + + E + R +V +++ G
Sbjct: 74 AIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 189 VMHRDLKPENFLFSSSAED--SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-----V 241
++HR++KP N + ED S K TDFG + + + F L G+ Y+ P+ V
Sbjct: 133 IVHRNIKPGNIM-RVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAV 191
Query: 242 LRRN----YGAEADIWSAGVILYILLSGVPPF 269
LR++ YGA D+WS GV Y +G PF
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 123/331 (37%), Gaps = 71/331 (21%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P + V Y + +G+G FG Q A K + + K +R E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 121 MHHLTGH-----RNIVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANL 173
+ HL N++ + + R+ + + +L + EL + +G +S
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
++ + H ++H DLKPEN L S +K DFG S + + V+ + S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY-EHQRVYTX-IQS 262
Query: 234 AYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSI 277
+Y APEV L YG D+WS G IL LL+G P GE E Q +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL 322
Query: 278 FDAILRGHIDFSSDPWPNISSSAK------------------------------------ 301
DA R S +P +
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 302 ----DIVKKMLHADPKERLSAAEVLNHPWMR 328
D +K+ L DP R++ + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
++M+ G L D + +G + + A + +++ H G++HRD+KP N + S++
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 152
Query: 205 AEDSPLKATDFGLS-VFFKPGDVFKD---LVGSAYYVAPEVLR-RNYGAEADIWSAGVIL 259
+ +K DFG++ G+ ++G+A Y++PE R + A +D++S G +L
Sbjct: 153 ---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP------NISSSAKDIVKKMLHADPK 313
Y +L+G PPF G++ S+ +R DP P +S+ +V K L +P+
Sbjct: 210 YEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARHEGLSADLDAVVLKALAKNPE 263
Query: 314 ERLSAAEVLNHPWMRV-DGDASDKP 337
R A + +RV +G+ + P
Sbjct: 264 NRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 123/331 (37%), Gaps = 71/331 (21%)
Query: 61 PMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
P + V Y + +G+G FG Q A K + + K +R E++R I
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----I 146
Query: 121 MHHLTGH-----RNIVELKGAYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANL 173
+ HL N++ + + R+ + + +L + EL + +G +S
Sbjct: 147 LEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQG-FSLPLVRKF 205
Query: 174 CRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS 233
++ + H ++H DLKPEN L S +K DFG S + + V+ + S
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY-EHQRVYXX-IQS 262
Query: 234 AYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE---------------QSI 277
+Y APEV L YG D+WS G IL LL+G P GE E Q +
Sbjct: 263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKL 322
Query: 278 FDAILRGHIDFSSDPWPNISSSAK------------------------------------ 301
DA R S +P +
Sbjct: 323 LDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDD 382
Query: 302 ----DIVKKMLHADPKERLSAAEVLNHPWMR 328
D +K+ L DP R++ + L HPW+R
Sbjct: 383 PLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LG+G + HK T FA K ++ + DV+ RE +++ L H+NIV+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HKNIVKLF 73
Query: 135 GAYED---RHSVNLIMDLCAGGELFDRIIAKGH---YSERAAANLCRQMVTVVHYCHSMG 188
E+ RH V LIM+ C G L+ + + E + R +V +++ G
Sbjct: 74 AIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 189 VMHRDLKPENFLFSSSAED--SPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPE-----V 241
++HR++KP N + ED S K TDFG + + + F L G+ Y+ P+ V
Sbjct: 133 IVHRNIKPGNIM-RVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 242 LRRN----YGAEADIWSAGVILYILLSGVPPF 269
LR++ YGA D+WS GV Y +G PF
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 26/239 (10%)
Query: 115 RREVQIMHHLTGHRNIVELKGAYEDRHSVN----LIMDLCAGGELFDRIIAKGHYSERAA 170
RRE Q L H IV + E ++M+ G L D + +G + + A
Sbjct: 60 RREAQNAAALN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-VFFKPGDVFKD 229
+ +++ H G++HRD+KP N + S++ + +K DFG++ G+
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQ 175
Query: 230 ---LVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGH 285
++G+A Y++PE R + A +D++S G +LY +L+G PPF G++ S+ +R
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-- 233
Query: 286 IDFSSDPWP------NISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV-DGDASDKP 337
DP P +S+ +V K L +P+ R A + +RV +G+ + P
Sbjct: 234 ----EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 12/256 (4%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
GR +G GQFG + + + +I + K D V + + + H +I
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMGV 189
V+L G + + V +IM+LC GEL + + + A+ L Q+ T + Y S
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RNY 246
+HRD+ N L SS + +K DFGLS + + +K G ++APE + R +
Sbjct: 513 VHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 247 GAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVK 305
+ +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLMT 626
Query: 306 KMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 627 KCWAYDPSRRPRFTEL 642
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 131
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMR 507
I++++ + D +NDGRI+++EF MM
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 128
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMR 507
I++++ + D +NDGRI+++EF MM
Sbjct: 129 EDIEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 131
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMR 507
I++++ + D +NDGRI+++EF MM
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK DF L+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK FGL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGD---A 479
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRAT--GEHVIE 131
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMR 507
+ I++++ + D +NDGRI+++EF MM
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 83
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-------------- 163
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 164 --HYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 200
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 261 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 296
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 124
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 241
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 301
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 302 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 17/258 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHH--LTGHRNIVE 132
LG G +G + V K+ + +A K S R + R+ ++ H + H V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMS---PFRGPKDRARKLAEVGSHEKVGQHPCCVR 121
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCHSMGVMH 191
L+ A+E+ + L +LC G L A G E R + + + HS G++H
Sbjct: 122 LEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVH 180
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRNYGAEAD 251
D+KP N K DFGL V + G Y+APE+L+ +YG AD
Sbjct: 181 LDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAAD 237
Query: 252 IWSAGV-ILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHA 310
++S G+ IL + + P GE Q + L +F++ +SS + ++ ML
Sbjct: 238 VFSLGLTILEVACNMELPHGGEGWQQLRQGYL--PPEFTA----GLSSELRSVLVMMLEP 291
Query: 311 DPKERLSAAEVLNHPWMR 328
DPK R +A +L P +R
Sbjct: 292 DPKLRATAEALLALPVLR 309
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH------- 127
LG+G FG + + +A K I + + + EV ++ L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 128 -----RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSER-AAANLCRQMVTVV 181
RN V+ A + + ++ + + C L+D I ++ +R L RQ++ +
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK-------------PG--DV 226
Y HS G++HR+LKP N E +K DFGL+ PG D
Sbjct: 130 SYIHSQGIIHRNLKPXNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 227 FKDLVGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF-WGETEQSIFDAILR 283
+G+A YVA EVL +Y + D +S G+I + + PF G +I +
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKLRS 243
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMRV 329
I+F D N K I++ ++ DP +R A +LN W+ V
Sbjct: 244 VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT- 481
D+ EF+ + + + EE L F FDK+ G+I +EEL L+ G+ T
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRAT--GEHVTE 131
Query: 482 --IKEIIAEVDIDNDGRINYEEFAAMMR 507
I++++ + D +NDGRI+++EF MM
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 16 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 72
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 189
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 249
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 250 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 285
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 68
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 185
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 246 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 83
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 200
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 261 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 296
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG--HRN 129
E+G G +G Y + A KS+ ++ N ++ + REV ++ L H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGE--------------------LFDRIIAKGHYSERA 169
+V L MD+CA D+ G +E
Sbjct: 68 VVRL-------------MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-T 113
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALAP 170
Query: 230 LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI-LR 283
+V + +Y APEV L+ Y D+WS G I + P F G +E IFD I L
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
Query: 284 GHIDFSSD------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
D+ D P + S ++ +ML +P +R+SA L H
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 326 WMRVD 330
++ D
Sbjct: 291 YLHKD 295
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG--HRN 129
E+G G +G Y + A KS+ ++ N ++ + REV ++ L H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGE--------------------LFDRIIAKGHYSERA 169
+V L MD+CA D+ G +E
Sbjct: 68 VVRL-------------MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-T 113
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALDP 170
Query: 230 LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI-LR 283
+V + +Y APEV L+ Y D+WS G I + P F G +E IFD I L
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
Query: 284 GHIDFSSD------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
D+ D P + S ++ +ML +P +R+SA L H
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 326 WMRVD 330
++ D
Sbjct: 291 YLHKD 295
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 82
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + ++ C G L+ + A + + + ++ RQ + Y H+ +
Sbjct: 83 LLFMG-YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED+ +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 142 IHRDLKSNNIFLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 246 ---YGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
Y ++D+++ G++LY L++G P+ I + + RG + P++S
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLS------PDLSKVRS 252
Query: 302 DIVKKM 307
+ K+M
Sbjct: 253 NCPKRM 258
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 83
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 200
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 261 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 296
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 20/196 (10%)
Query: 145 LIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSS 204
++M+ G L D + +G + + A + +++ H G++HRD+KP N + S++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT 169
Query: 205 AEDSPLKATDFGLS-VFFKPGDVFKD---LVGSAYYVAPEVLRRN-YGAEADIWSAGVIL 259
+ +K DFG++ G+ ++G+A Y++PE R + A +D++S G +L
Sbjct: 170 ---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 226
Query: 260 YILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWP------NISSSAKDIVKKMLHADPK 313
Y +L+G PPF G++ S+ +R DP P +S+ +V K L +P+
Sbjct: 227 YEVLTGEPPFTGDSPVSVAYQHVR------EDPIPPSARHEGLSADLDAVVLKALAKNPE 280
Query: 314 ERLSAAEVLNHPWMRV 329
R A + +RV
Sbjct: 281 NRYQTAAEMRADLVRV 296
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 20 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 76
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 193
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 253
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 254 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 289
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 19 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 75
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 192
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 253 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 288
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 111 VEDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA 170
+E+VR+E ++ L H NI+ L+G ++ L+M+ GG L +R+++
Sbjct: 50 IENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDIL 107
Query: 171 ANLCRQMVTVVHYCHS---MGVMHRDLKPENFLFSSSAEDSPL-----KATDFGLSVFFK 222
N Q+ ++Y H + ++HRDLK N L E+ L K TDFGL+ +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 223 PGDVFKDLVGSAYYVAPEVLRRN-YGAEADIWSAGVILYILLSGVPPFWG 271
G+ ++APEV+R + + +D+WS GV+L+ LL+G PF G
Sbjct: 168 RTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 452
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + A+ L Q+ T + Y S
Sbjct: 453 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 511
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L S++ +K DFGLS + + +K G ++APE + R
Sbjct: 512 FVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 569 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 625
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 626 TKCWAYDPSRRPRFTEL 642
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK D GL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 67/306 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + + +RKLI+ + +R RE+Q++H
Sbjct: 75 ELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 127
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 186
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 187 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 238
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRGH-------------- 285
+Y ++DIWS G+ L + G +PP + + +F + G
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 298
Query: 286 -----------------IDF-SSDPWPNISSSA-----KDIVKKMLHADPKERLSAAEVL 322
+D+ ++P P + S+ +D V K L +P ER +++
Sbjct: 299 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 323 NHPWMR 328
H +++
Sbjct: 359 VHAFIK 364
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 71
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 72 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 131 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 116/305 (38%), Gaps = 65/305 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG--HRN 129
E+G G +G Y + A KS+ + REV ++ L H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGE--------------------LFDRIIAKGHYSERA 169
+V L MD+CA D+ G +E
Sbjct: 76 VVRL-------------MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-T 121
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ +
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALTP 178
Query: 230 LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI-LR 283
+V + +Y APEV L+ Y D+WS G I + P F G +E IFD I L
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238
Query: 284 GHIDFSSD------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
D+ D P + S ++ +ML +P +R+SA L H
Sbjct: 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298
Query: 326 WMRVD 330
++ D
Sbjct: 299 YLHKD 303
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 93
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 94 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 152
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 153 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 94
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 95 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 154 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 72
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + A+ L Q+ T + Y S
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L S++ +K DFGLS + + +K G ++APE + R
Sbjct: 132 FVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 245
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 246 TKCWAYDPSRRPRFTEL 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 132/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G +L + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK D GL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 66
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 67 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 126 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 71
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 72 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 131 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 130/316 (41%), Gaps = 44/316 (13%)
Query: 58 LGKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRRE 117
L K + +V Y +G G +G T + A K +S R + + RE
Sbjct: 13 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-RPFQSIIHAKRTYRE 71
Query: 118 VQIMHHLTGHRNIVELKGAY------EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA 171
++++ H+ H N++ L + E+ + V L+ L G + I+ ++
Sbjct: 72 LRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 128
Query: 172 NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
L Q++ + Y HS ++HRDLKP N + ED LK D GL+ D V
Sbjct: 129 FLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLAR--HTDDEMTGYV 183
Query: 232 GSAYYVAPEVLRR--NYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFS 289
+ +Y APE++ +Y DIWS G I+ LL+G F G ILR
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 243
Query: 290 SDPWPNISSS---------------------------AKDIVKKMLHADPKERLSAAEVL 322
++ ISS A D+++KML D +R++AA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 323 NHPWMRVDGDASDKPL 338
H + D D+P+
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 68
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 69 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 128 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR--REVQIMHHLTG--HRN 129
E+G G +G Y + A KS+ ++ N ++ + REV ++ L H N
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGE--------------------LFDRIIAKGHYSERA 169
+V L MD+CA D+ G +E
Sbjct: 68 VVRL-------------MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-T 113
Query: 170 AANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD 229
+L RQ + + + H+ ++HRDLKPEN L +S +K DFGL+ +
Sbjct: 114 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALFP 170
Query: 230 LVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETEQ----SIFDAI-LR 283
+V + +Y APEV L+ Y D+WS G I + P F G +E IFD I L
Sbjct: 171 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 230
Query: 284 GHIDFSSD------------------PWPNISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
D+ D P + S ++ +ML +P +R+SA L H
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 326 WMRVD 330
++ D
Sbjct: 291 YLHKD 295
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 139/339 (41%), Gaps = 88/339 (25%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REV 118
+E Y G+ LG G FG+ V ++ ++FA K + ++D R RE+
Sbjct: 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV----------LQDPRYKNREL 51
Query: 119 QIMHHLTGHRNIVELKGAY-------------EDRHS----------------------- 142
IM L H NI++L + D H+
Sbjct: 52 DIMKVL-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN 110
Query: 143 --VNLIMDLCAGGELFDRIIAKGHYSERAAA-NLCR----QMVTVVHYCHSMGVMHRDLK 195
+N+IM+ + +++ S R+ NL Q+ V + HS+G+ HRD+K
Sbjct: 111 KYLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 196 PENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--RRNYGAEADIW 253
P+N L +S +D+ LK DFG + P + + S +Y APE++ Y D+W
Sbjct: 169 PQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLW 226
Query: 254 SAGVILYILLSGVPPFWGETE------------QSIFDAILRGHIDFSSDPWPNI----- 296
S G + L+ G P F GET + ++R + ++ +P +
Sbjct: 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW 286
Query: 297 --------SSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
S A D+++++L +P R++ E + HP+
Sbjct: 287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
LGRG FG + + K T Q A K + +E R E + IV L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
GA + VN+ M+L GG L I G E A Q + + Y H+ ++H D+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV------GSAYYVAPE-VLRRNYG 247
K +N L SS + L DFG ++ +P + K L+ G+ ++APE V+ +
Sbjct: 191 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 248 AEADIWSAGVILYILLSGVPPF 269
A+ DIWS+ ++ +L+G P+
Sbjct: 249 AKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 14/257 (5%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMHHLTGHRN 129
GR +G GQFG + + + +I + K D V E +E M H +
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHPH 72
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL-CRQMVTVVHYCHSMG 188
IV+L G + + V +IM+LC GEL + + + A+ L Q+ T + Y S
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR 131
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR-RN 245
+HRD+ N L SS + +K DFGLS + + K G ++APE + R
Sbjct: 132 FVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIV 304
+ + +D+W GV ++ IL+ GV PF G + I G + P PN + ++
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG--ERLPMP-PNCPPTLYSLM 245
Query: 305 KKMLHADPKERLSAAEV 321
K DP R E+
Sbjct: 246 TKCWAYDPSRRPRFTEL 262
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 68/314 (21%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + + +RKLI+ + +R RE+Q++H
Sbjct: 40 ELGAGNGGVVFKVSHKPSGL------VMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 92
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 151
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 152 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 203
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIFDAILRGH-------------- 285
+Y ++DIWS G+ L + G +PP + + +F + G
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
Query: 286 -----------------IDF-SSDPWPNISSSA-----KDIVKKMLHADPKERLSAAEVL 322
+D+ ++P P + S +D V K L +P ER +++
Sbjct: 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
Query: 323 NHPWM-RVDGDASD 335
H ++ R D + D
Sbjct: 324 VHAFIKRSDAEEVD 337
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 21/268 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
ELGRG +GV H + Q A K I R +N + + + ++ I V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 134 KGAYEDRHSVNLIMDL--CAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHS-MGV 189
GA V + +L + + + ++I KG E + +V + + HS + V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL-VGSAYYVAPEVL-----R 243
+HRD+KP N L ++ + +K DFG+S + DV KD+ G Y APE + +
Sbjct: 159 IHRDVKPSNVLINALGQ---VKXCDFGISGYLV-DDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 244 RNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ Y ++DIWS G+ L P+ WG Q + + +D S+
Sbjct: 215 KGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFSAEFV 271
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMRV 329
D + L + KER + E+ HP+ +
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQHPFFTL 299
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 94
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 95 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 153
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 154 IHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR---REVQIMHHLTG 126
I G LG+G FG VTH++T + K + R D E R +EV++M L
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELI------RFDEETQRTFLKEVKVMRCLE- 65
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK---GHYSERAAANLCRQMVTVVHY 183
H N+++ G +N I + GG L R I K Y + + + + + Y
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 184 CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF-------------FKPGDVFK-- 228
HSM ++HRDL N L E+ + DFGL+ K D K
Sbjct: 124 LHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 229 DLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSGV---PPFWGETEQSIFDAILRG 284
+VG+ Y++APE++ R+Y + D++S G++L ++ V P + T F +RG
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD--FGLNVRG 238
Query: 285 HIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWM 327
+D PN S I + DP++R S + L H W+
Sbjct: 239 FLDRYCP--PNCPPSFFPITVRCCDLDPEKRPSFVK-LEH-WL 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 86
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 87 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 145
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 146 IHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTI 482
D+ EF+ + + + EE L + F FD++ GYI EEL + G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRAS--GEHVTD 128
Query: 483 KEI---IAEVDIDNDGRINYEEFAAMM 506
+EI + + D +NDGRI+++EF MM
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ + G+ LG G FG L KD + ++ K++ D D+ D+ E
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAV---KMLKSDATEKDLSDLISE 83
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--------------- 162
+++M + H+NI+ L GA + +I++ + G L + + A+
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
S + + Q+ + Y S +HRDL N L + ED+ +K DFGL+
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDI 200
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D K ++APE L R Y ++D+WS GV+L+ I G P+ G +
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 261 LFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQR 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 66
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 67 LLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSV---FFKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 126 IHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + A RKLI+ + +R RE+Q++H
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHECNSPY- 65
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPP 268
+Y ++DIWS G+ L + G +PP
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + A RKLI+ + +R RE+Q++H
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHECNSPY- 65
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPP 268
+Y ++DIWS G+ L + G +PP
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + A RKLI+ + +R RE+Q++H
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHECNSPY- 65
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPP 268
+Y ++DIWS G+ L + G +PP
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 30/209 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV + V+HK + A RKLI+ + +R RE+Q++H
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMA------RKLIHLEIKPAIRNQIIRELQVLHECNSPY- 65
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTVVHYCHSM- 187
IV GA+ +++ M+ GG L D+++ K G E+ + ++ + Y
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y++PE L+
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQ 176
Query: 244 -RNYGAEADIWSAGVILYILLSG---VPP 268
+Y ++DIWS G+ L + G +PP
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 72 GRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
G+ +G G FG Y H D + + + + ++ + EV ++ T H NI
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ-----QLQAFKNEVGVLRK-TRHVNI 66
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
+ G Y + ++ C G L+ + I + + ++ RQ + Y H+ +
Sbjct: 67 LLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVLRRN- 245
+HRDLK N ED +K DFGL+ + F+ L GS ++APEV+R
Sbjct: 126 IHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 246 ---YGAEADIWSAGVILYILLSGVPPF 269
Y ++D+++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG + + K T Q A K + +E R E + IV L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
GA + VN+ M+L GG L I G E A Q + + Y H+ ++H D+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV------GSAYYVAPE-VLRRNYG 247
K +N L SS + L DFG ++ +P + K L+ G+ ++APE V+ +
Sbjct: 177 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 234
Query: 248 AEADIWSAGVILYILLSGVPPF 269
A+ DIWS+ ++ +L+G P+
Sbjct: 235 AKVDIWSSCCMMLHMLNGCHPW 256
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
LSEE I K F D D G I+ +EL + LG ++ E+ ++E D DG+GTI
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 427 DYIEFITATMHMNRVE----REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTI 482
D+ EF+ + + + EE L + F FD++ GYI EEL + G+ T
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRAS--GEHVTD 128
Query: 483 KEI---IAEVDIDNDGRINYEEFAAMM 506
+EI + + D +NDGRI+++EF MM
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+GRG FG + + K T Q A K + +E R E + IV L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 135 GAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMHRDL 194
GA + VN+ M+L GG L I G E A Q + + Y H+ ++H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 195 KPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV------GSAYYVAPE-VLRRNYG 247
K +N L SS + L DFG ++ +P + K L+ G+ ++APE V+ +
Sbjct: 193 KADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 250
Query: 248 AEADIWSAGVILYILLSGVPPF 269
A+ DIWS+ ++ +L+G P+
Sbjct: 251 AKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD F G+ + + APE L N +
Sbjct: 133 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRA 245
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K+ ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKL-INRDDVEDVRREVQI 120
R+ G+ LG G FG + KD ++ ++ K +D+ D+ E+++
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEM 93
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----- 175
M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 176 -----------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNI 210
Query: 225 DVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFD 279
D +K ++APE L R Y ++D+WS GV+++ I G P+ G + +F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ GH D N ++ +++ HA P +R + +++
Sbjct: 271 LLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPKL 64
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 125 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 17/211 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQIMHHLTG 126
+ +++G+G FG+ + K A KS+ S + + ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA-NLCRQMVTVVHYCH 185
H NIV+L G + ++M+ G+L+ R++ K H + + L + + Y
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 186 SMG--VMHRDLKPENFLFSSSAEDSPL--KATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ ++HRDL+ N S E++P+ K DFGLS + L+G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 242 L---RRNYGAEADIWSAGVILYILLSGVPPF 269
+ +Y +AD +S +ILY +L+G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 21/261 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 14 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPKL 67
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 128 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS-AKDI 303
Y +++D+WS GV+++ + S G P+ + + + I G + P ++S+ I
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----PRLASTHVYQI 239
Query: 304 VKKMLHADPKERLSAAEVLNH 324
+ P++R + + +L
Sbjct: 240 MNHCWRERPEDRPAFSRLLRQ 260
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 9 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPKL 62
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 123 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 11 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPKL 64
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 125 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I++ G L D R + S + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 16/220 (7%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 31 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMMKLS-HPKL 84
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 145 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRG 284
Y +++D+WS GV+++ + S G P+ + + + I G
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 240
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 21/261 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +E+G GQFG+ +L + K + A K+I + D +E E ++M L+ H +
Sbjct: 12 FVQEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAMSEEDFIE----EAEVMMKLS-HPKL 65
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
V+L G ++ + L+ + G L D + +G ++ +C + + Y V
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLR-RN 245
+HRDL N L E+ +K +DFG++ F D + G+ + + +PEV
Sbjct: 126 IHRDLAARNCLV---GENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 246 YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSS-AKDI 303
Y +++D+WS GV+++ + S G P+ + + + I G + P ++S+ I
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK----PRLASTHVYQI 237
Query: 304 VKKMLHADPKERLSAAEVLNH 324
+ P++R + + +L
Sbjct: 238 MNHCWRERPEDRPAFSRLLRQ 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 46/296 (15%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRREVQIM 121
+ ++N + + LG G G + F + ++ R LI+ D+ + E++++
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRMLIDFCDIALM--EIKLL 80
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLC 174
H N++ + + + ++LC L D + +K E +L
Sbjct: 81 TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPG 224
RQ+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 140 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 225 DV-----FKDLVGSAYYVAPEVL----RRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
+ G++ + APE+L +R DI+S G + Y +LS G PF +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 275 QSIFDAILRGHIDFSSDPWP-----NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+ I+RG FS D ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 260 RE--SNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 23 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 79
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 196
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 256
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 257 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 26 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 82
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 199
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 200 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 259
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 260 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I++ G L D R + S + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 21 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 77
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVT---ENNVMKIADFGLARDI 194
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 254
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 255 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 46/296 (15%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRREVQIM 121
+ ++N + + LG G G + F + ++ R LI+ D+ + E++++
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRMLIDFCDIALM--EIKLL 80
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLC 174
H N++ + + + ++LC L D + +K E +L
Sbjct: 81 TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPG 224
RQ+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 140 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 225 DV-----FKDLVGSAYYVAPEVL----RRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
+ G++ + APE+L +R DI+S G + Y +LS G PF +
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 275 QSIFDAILRGHIDFSSDPWP-----NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+ I+RG FS D ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 260 RE--SNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 136
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 253
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 254 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 313
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 314 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMH 122
D R + G ++G G FGV Y +T A K +++ I +++ + +E+++M
Sbjct: 28 DERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMA 85
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVT 179
H N+VEL G D + L+ G L DR+ S + +
Sbjct: 86 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYY 236
+++ H +HRD+K N L E K +DFGL S F + +VG+ Y
Sbjct: 145 GINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVP 267
+APE LR ++DI+S GV+L +++G+P
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMH 122
D R + G ++G G FGV Y +T A K +++ I +++ + +E+++M
Sbjct: 28 DERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMA 85
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVT 179
H N+VEL G D + L+ G L DR+ S + +
Sbjct: 86 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 144
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYY 236
+++ H +HRD+K N L E K +DFGL S F + +VG+ Y
Sbjct: 145 GINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVP 267
+APE LR ++DI+S GV+L +++G+P
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ ++ DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMRIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 140 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 252
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQFG Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD G+ + + APE L N +
Sbjct: 133 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRA 245
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMH 122
D R + G ++G G FGV Y +T A K +++ I +++ + +E+++M
Sbjct: 22 DERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVMA 79
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVT 179
H N+VEL G D + L+ G L DR+ S + +
Sbjct: 80 KCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN 138
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYY 236
+++ H +HRD+K N L E K +DFGL S F + +VG+ Y
Sbjct: 139 GINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVP 267
+APE LR ++DI+S GV+L +++G+P
Sbjct: 196 MAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I+ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 38/279 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKER 315
+F + GH D N ++ +++ HA P +R
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQR 303
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 47/284 (16%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
R L G F Y + +++A K + S + + + +EV M L+GH NIV+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 133 LKGAYE--------DRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLCRQMVTVVH 182
A + L+ +LC G E ++ ++G S + Q V
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 183 YCHSMG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA------ 234
+ H ++HRDLK EN L S+ +K DFG + + D SA
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGT---IKLCDFGSATTISH---YPDYSWSAQRRALV 204
Query: 235 ----------YYVAPEV--LRRNY--GAEADIWSAGVILYILLSGVPPFWGETEQSIFDA 280
Y PE+ L N+ G + DIW+ G ILY+L PF + I +
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG 264
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNH 324
+S P + +++ ML +P+ERLS AEV++
Sbjct: 265 ------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I+ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVGS---AYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D +K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 39/247 (15%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--------------IAKGHYS 166
M HL H NIV L GA V +I + C G+L + + IA S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
R + Q+ + + S +HRD+ N L ++ K DFGL+ D+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLA-----RDI 214
Query: 227 FKD----LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276
D + G+A ++APE + Y ++D+WS G++L+ + S G+ P+ G S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274
Query: 277 IFDAILR 283
F +++
Sbjct: 275 KFYKLVK 281
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 38/286 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLV----THKDTKQQFACKSISSRKLINRD----DVEDVRRE 117
R+ G+ LG G FG + KD ++ ++ K++ D D+ D+ E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV---KMLKDDATEKDLSDLVSE 90
Query: 118 VQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR-- 175
+++M + H+NI+ L GA + +I++ + G L + + A+ + ++ R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 176 --------------QMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
Q+ + Y S +HRDL N L + E++ +K DFGL+
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---ENNVMKIADFGLARDI 207
Query: 222 KPGDVFKDLVG---SAYYVAPEVL-RRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQS 276
D K ++APE L R Y ++D+WS GV+++ I G P+ G +
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 267
Query: 277 IFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+F + GH D N ++ +++ HA P +R + +++
Sbjct: 268 LFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 72
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I++ G L D R + S + Q+ + + Y +H
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD G+ + + APE L N +
Sbjct: 133 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK---DYRMERPEGCPEKVYELMRA 245
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 246 CWQWNPSDRPSFAEI 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I++ G L D R + + + Q+ + + Y +H
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 140 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 252
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 39/247 (15%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI--------------IAKGHYS 166
M HL H NIV L GA V +I + C G+L + + IA S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 167 ERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDV 226
R + Q+ + + S +HRD+ N L ++ K DFGL+ D+
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLA-----RDI 214
Query: 227 FKD----LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQS 276
D + G+A ++APE + Y ++D+WS G++L+ + S G+ P+ G S
Sbjct: 215 MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274
Query: 277 IFDAILR 283
F +++
Sbjct: 275 KFYKLVK 281
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 137 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 249
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQIMHHLTG 126
+ +++G+G FG+ + K A KS+ S + + ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA-NLCRQMVTVVHYCH 185
H NIV+L G + ++M+ G+L+ R++ K H + + L + + Y
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 186 SMG--VMHRDLKPENFLFSSSAEDSPL--KATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ ++HRDL+ N S E++P+ K DFG S + L+G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 242 L---RRNYGAEADIWSAGVILYILLSGVPPF 269
+ +Y +AD +S +ILY +L+G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 136 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 248
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 249 CWQWNPSDRPSFAEI 263
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 17/211 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSI----SSRKLINRDDVEDVRREVQIMHHLTG 126
+ +++G+G FG+ + K A KS+ S + + ++ +REV IM +L
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN- 81
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAA-NLCRQMVTVVHYCH 185
H NIV+L G + ++M+ G+L+ R++ K H + + L + + Y
Sbjct: 82 HPNIVKLYGLMHN--PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 186 SMG--VMHRDLKPENFLFSSSAEDSPL--KATDFGLSVFFKPGDVFKDLVGSAYYVAPEV 241
+ ++HRDL+ N S E++P+ K DF LS + L+G+ ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 242 L---RRNYGAEADIWSAGVILYILLSGVPPF 269
+ +Y +AD +S +ILY +L+G PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 140 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 252
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+GRG +G + HK + Q A K I R ++ + + + ++ ++ + IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYS-------ERAAANLCRQMVTVV-HYCH 185
GA + M+L + FD+ K YS E + V + H
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFY-KYVYSVLDDVIPEEILGKITLATVKALNHLKE 143
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL--- 242
++ ++HRD+KP N L S +K DFG+S G Y+APE +
Sbjct: 144 NLKIIHRDIKPSNILLDRSGN---IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 243 --RRNYGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFSSDPWPNISS 298
R+ Y +D+WS G+ LY L +G P+ W S+FD + + DP P +S+
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWN----SVFDQLTQV---VKGDP-PQLSN 252
Query: 299 SAK--------DIVKKMLHADPKERLSAAEVLNHPWM 327
S + + V L D +R E+L HP++
Sbjct: 253 SEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 16/219 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y+ K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 93
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G ++ + G L D R + + + Q+ + + Y +H
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 154 RDLAARNCLV---GENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGH 285
++D+W+ GV+L+ I G+ P+ G ++D + +G+
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGY 248
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 137 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 249
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 48/299 (16%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ ++N + + LG G G + F + ++ ++++ D + E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRML-IDFCDIALMEIKLLT 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLCR 175
H N++ + + + ++LC L D + +K E +L R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPGD 225
Q+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 226 V-----FKDLVGSAYYVAPEVL--------RRNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ G++ + APE+L +R DI+S G + Y +LS G PF
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 272 ETEQSIFDAILRGHIDFSSDPWP-----NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+ + I+RG FS D ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 243 KYSRE--SNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 76
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 137 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 249
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 250 CWQWNPSDRPSFAEI 264
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 28 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 79
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 139 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 251
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 252 CWQWNPSDRPSFAEI 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 48/299 (16%)
Query: 63 EDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMH 122
+ ++N + + LG G G + F + ++ ++++ D + E++++
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVF------QGSFQGRPVAVKRML-IDFCDIALMEIKLLT 63
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-------AANLCR 175
H N++ + + + ++LC L D + +K E +L R
Sbjct: 64 ESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFLFSSS----------AEDSPLKATDFGLSVFFKPGD 225
Q+ + V + HS+ ++HRDLKP+N L S+S AE+ + +DFGL G
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 226 V-----FKDLVGSAYYVAPEVL--------RRNYGAEADIWSAGVILYILLS-GVPPFWG 271
+ G++ + APE+L +R DI+S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 272 ETEQSIFDAILRGHIDFSSDPWP-----NISSSAKDIVKKMLHADPKERLSAAEVLNHP 325
+ + I+RG FS D ++ + A D++ +M+ DP +R +A +VL HP
Sbjct: 243 KYSRE--SNIIRGI--FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 12 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 63
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + VGS + + PEVL
Sbjct: 124 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 87
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 148 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 260
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 261 CWQWNPSDRPSFAEI 275
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 13 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 64
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + VGS + + PEVL
Sbjct: 125 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 23/262 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG---HRNIV 131
+G G+FG K ++ +C +I K + E RRE + G H NI+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 132 ELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G + V ++ + G L F R+ G ++ + R + + + Y M
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGD---VFKDLVGSAY---YVAPEVLR 243
+HRDL N L +S+ K +DFGLS F + + +G + APE +
Sbjct: 138 VHRDLAARNILVNSNLV---CKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 244 -RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R + + +D WS G++++ ++S G P+W + Q + +AI + D+ P P+ +S
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLH 251
Query: 302 DIVKKMLHADPKERLSAAEVLN 323
++ D R +V++
Sbjct: 252 QLMLDCWQKDRNARPRFPQVVS 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 140 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 252
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 19 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 70
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 71 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + VGS + + PEVL
Sbjct: 131 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 281
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + S + Q+ + + Y +H
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
R+L N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 342 RNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 454
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 455 CWQWNPSDRPSFAEI 469
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVR----REVQIMHHLTGHRN 129
ELG G GV V H+ + I +RKLI+ + +R RE+Q++H
Sbjct: 23 ELGAGNGGVVTKVQHRPSGL------IMARKLIHLEIKPAIRNQIIRELQVLHECNSPY- 75
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-G 188
IV GA+ +++ M+ GG L + E + ++ + Y
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQ 135
Query: 189 VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL----VGSAYYVAPEVLR- 243
+MHRD+KP N L +S E +K DFG+S G + + VG+ Y+APE L+
Sbjct: 136 IMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQG 187
Query: 244 RNYGAEADIWSAGVILYILLSG---VPPFWGETEQSIF 278
+Y ++DIWS G+ L L G +PP + ++IF
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 8 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 59
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + VGS + + PEVL
Sbjct: 120 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 135 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 247
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 248 CWQWNPSDRPSFAEI 262
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 114/262 (43%), Gaps = 23/262 (8%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG---HRNIV 131
+G G+FG K ++ +C +I K + E RRE + G H NI+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAI---KTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 132 ELKGAYEDRHSVNLIMDLCAGGEL--FDRIIAKGHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G + V ++ + G L F R+ G ++ + R + + + Y M
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS------AYYVAPEVLR 243
+HRDL N L +S+ K +DFGLS F + S + APE +
Sbjct: 140 VHRDLAARNILVNSNLV---CKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 244 -RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
R + + +D WS G++++ ++S G P+W + Q + +AI + D+ P P+ +S
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ---DYRLPPPPDCPTSLH 253
Query: 302 DIVKKMLHADPKERLSAAEVLN 323
++ D R +V++
Sbjct: 254 QLMLDCWQKDRNARPRFPQVVS 275
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 38/288 (13%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGH----YSERAAANLCRQM 177
H+ H N+V L GA + + +I++ C G L + +K + Y E A +L +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDF 146
Query: 178 VTVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFK 222
+T+ H C+S V +HRDL N L S E + +K DFGL+ ++
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKD 203
Query: 223 PGDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFD 279
P V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 263
Query: 280 AILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 264 RRLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 33/267 (12%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
+ G ++GRG FG + + A KS R+ + D +E +I+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKS--CRETLPPDLKAKFLQEARILKQYS-HPN 173
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV----TVVHYCH 185
IV L G + + ++M+L GG+ + +G R QMV + Y
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE 230
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAYYVAP 239
S +HRDL N L + E + LK +DFG+S V+ G + + V + AP
Sbjct: 231 SKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADGVYAASGGLRQVPVK---WTAP 284
Query: 240 EVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
E L NYG +E+D+WS G++L+ S G P+ + Q + + +G P P
Sbjct: 285 EAL--NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GRLPCPE 338
Query: 296 ISSSAK-DIVKKMLHADPKERLSAAEV 321
+ A ++++ +P +R S + +
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 75
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I++ G L D R + + + Q+ + + Y +H
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD G+ + + APE L N +
Sbjct: 136 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 248
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 249 CWQWNPSDRPSFAEI 263
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 14/222 (6%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIV 131
R +G G+FG K ++ +I + K+ D E IM H N+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVV 107
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G V ++++ G L D + K G ++ + R + + Y MG
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY 166
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--PGDVFKDLVGS--AYYVAPEVLR-R 244
+HRDL N L +S+ K +DFGLS + P V+ G + APE ++ R
Sbjct: 167 VHRDLAARNILVNSNLV---CKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 245 NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ + +D+WS G++++ ++S G P+W + Q + AI G+
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 265
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 88/342 (25%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+P +D R YI R+LG G F +L A K + K+ E E+
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY----TEAAEDEI 66
Query: 119 QIMHHLT----------GHRNIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYS 166
+++ + G +I++L + + + V+++M GE +I K Y
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YE 124
Query: 167 ERA-----AANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSP-----LKATDF 215
R + +Q++ + Y H G++H D+KPEN L DSP +K D
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV--DSPENLIQIKIADL 182
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG--------- 265
G + ++ + + + + + Y +PEVL +G ADIWS +++ L++G
Sbjct: 183 GNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240
Query: 266 -------------------VPPFW---GETEQSIFDA-----------------ILRGHI 286
+P + G+ ++ F++ +L
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY 300
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
FS D IS D + ML DP++R A ++NHPW++
Sbjct: 301 KFSKDEAKEIS----DFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 88/342 (25%)
Query: 59 GKPMEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREV 118
G+P +D R YI R+LG G F +L A K + K+ E E+
Sbjct: 13 GEPYKDAR--YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY----TEAAEDEI 66
Query: 119 QIMHHLT----------GHRNIVELKGAYEDR--HSVNLIMDLCAGGELFDRIIAKGHYS 166
+++ + G +I++L + + + V+++M GE +I K Y
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YE 124
Query: 167 ERA-----AANLCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSP-----LKATDF 215
R + +Q++ + Y H G++H D+KPEN L DSP +K D
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV--DSPENLIQIKIADL 182
Query: 216 GLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNYGAEADIWSAGVILYILLSG--------- 265
G + ++ + + + + + Y +PEVL +G ADIWS +++ L++G
Sbjct: 183 GNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEG 240
Query: 266 -------------------VPPFW---GETEQSIFDA-----------------ILRGHI 286
+P + G+ ++ F++ +L
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY 300
Query: 287 DFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
FS D IS D + ML DP++R A ++NHPW++
Sbjct: 301 KFSKDEAKEIS----DFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 278
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
R+L N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 339 RNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 451
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 452 CWQWNPSDRPSFAEI 466
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 126/281 (44%), Gaps = 33/281 (11%)
Query: 70 IFGRELGRGQFGVTYL-VTHKDTKQQFACKSISSRKLINR--DDVEDVRREVQIMHHLTG 126
+ +G G FG Y H D ++ K+++ + + R EV ++ T
Sbjct: 39 MLSTRIGSGSFGTVYKGKWHGDV-------AVKILKVVDPTPEQFQAFRNEVAVLRK-TR 90
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-IAKGHYSERAAANLCRQMVTVVHYCH 185
H NI+ G Y + ++ ++ C G L+ + + + + ++ RQ + Y H
Sbjct: 91 HVNILLFMG-YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVF---FKPGDVFKDLVGSAYYVAPEVL 242
+ ++HRD+K N E +K DFGL+ + + GS ++APEV+
Sbjct: 150 AKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 243 RRN----YGAEADIWSAGVILYILLSGVPPF--WGETEQSIFDAILRGHIDFS-SDPWPN 295
R + ++D++S G++LY L++G P+ +Q IF + RG+ S + N
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF-MVGRGYASPDLSKLYKN 265
Query: 296 ISSSAK----DIVKKMLHADP--KERLSAAEVLNHPWMRVD 330
+ K D VKK+ P + LS+ E+L H +++
Sbjct: 266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKIN 306
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 320
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
R+L N L E+ +K DFGLS GD + G+ + + APE L N +
Sbjct: 381 RNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 493
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 494 CWQWNPSDRPSFAEI 508
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
+L EEI L+E F+ D D G I +L + +G +E E+ +L + +++ G
Sbjct: 18 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 426 IDYIEFI--------TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK---Y 474
+D+ +F+ T M V + L AF FD + G I+ EL A++K +
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGV---KELRDAFREFDTNGDGEISTSELREAMRKLLGH 134
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+G + I+EII +VD++ DGR+++EEF MM +
Sbjct: 135 QVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAAD 419
K++AE + L++ F+ DT+ G I+ EL+ + K LG ++ ++ +++ D
Sbjct: 90 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 149
Query: 420 VDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 150 LNGDGRVDFEEFV 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG GQ+G Y K A K++ + +VE+ +E +M + H N+V+L
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 79
Query: 134 KGAYEDRHSVNLIMDLCAGGELFD--RIIAKGHYSERAAANLCRQMVTVVHYCHSMGVMH 191
G +I + G L D R + + + Q+ + + Y +H
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YG 247
RDL N L E+ +K DFGLS GD G+ + + APE L N +
Sbjct: 140 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 248 AEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+W+ GV+L+ I G+ P+ G +++ + + D+ + ++++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK---DYRMERPEGCPEKVYELMRA 252
Query: 307 MLHADPKERLSAAEV 321
+P +R S AE+
Sbjct: 253 CWQWNPSDRPSFAEI 267
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F FDK+ GYI +EEL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
EF M+
Sbjct: 152 EFLEFMK 158
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L ++F+ D + G I EELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 SEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y EF+
Sbjct: 150 YDEFL 154
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I++ C G L + +K + + A +L + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ ++ P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDP 202
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 263 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 387 SGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVE 442
G I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 443 REEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINY 499
EE L F FDK+ GYI +EEL+ L+ G+ T I+E++ + D +NDGRI+Y
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDY 150
Query: 500 EEFAAMMR 507
+EF M+
Sbjct: 151 DEFLEFMK 158
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EEE L ++F+ D + G I EELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 TEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y EF+
Sbjct: 150 YDEFL 154
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKT 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F FDK+ GYI +EEL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLEELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
EF M+
Sbjct: 152 EFLEFMK 158
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EEE L ++F+ D + G I EELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 TEEE---LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y EF+
Sbjct: 150 YDEFL 154
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + YI +GRG +G YL K+T++ A K + +R + D + + RE+ I++ L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV-NRMFEDLIDCKRILREITILNRL 82
Query: 125 TGHRNIVELKGAYEDR----HSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTV 180
I D + +++++ A +L +E + ++
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF----------------KPG 224
++ H G++HRDLKP N L + +D +K DFGL+ +PG
Sbjct: 142 ENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 225 DVFKDL-------VGSAYYVAPE--VLRRNYGAEADIWSAGVILYILLS 264
K+L V + +Y APE +L+ NY DIWS G I LL+
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 25/36 (69%)
Query: 293 WPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+P+IS ++++ ML +P +R++ + L+HP+++
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 37 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 94
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----------YSERAA 170
M HL H NIV L GA V +I + C G+L + + K R
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD- 229
+ Q+ + + S +HRD+ N L ++ K DFGL+ D+ D
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLA-----RDIMNDS 206
Query: 230 ---LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
+ G+A ++APE + Y ++D+WS G++L+ + S G+ P+ G S F
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 266
Query: 281 ILR 283
+++
Sbjct: 267 LVK 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH----------YSERAA 170
M HL H NIV L GA V +I + C G+L + + K R
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKD- 229
+ Q+ + + S +HRD+ N L ++ K DFGL+ D+ D
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLA-----RDIMNDS 214
Query: 230 ---LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
+ G+A ++APE + Y ++D+WS G++L+ + S G+ P+ G S F
Sbjct: 215 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK 274
Query: 281 ILR 283
+++
Sbjct: 275 LVK 277
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
E+G G G + + + T A K + R+ N+++ + + ++ ++ IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM--RRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 134 KGAYEDRHSVNLIMDL---CAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHSM-GV 189
G + V + M+L CA +L R+ +G ER + +V ++Y GV
Sbjct: 90 FGTFITNTDVFIAMELMGTCAE-KLKKRM--QGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVL------R 243
+HRD+KP N L + +K DFG+S G A Y+APE + +
Sbjct: 147 IHRDVKPSNILLDERGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 244 RNYGAEADIWSAGVILYILLSGVPPFWG-ETEQSIFDAILR-------GHIDFSSDPWPN 295
+Y AD+WS G+ L L +G P+ +T+ + +L+ GH+ FS D
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGD---- 259
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
+ VK L D ++R ++L H +++
Sbjct: 260 ----FQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 28 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 79
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMY 195
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 122
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I++ C G L + +K + + A +L + +
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ ++ P
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDP 239
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 300 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I++ C G L + +K + + A +L + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ ++ P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDP 202
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 263 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
+L EEI L+E F+ D D G I +L + +G +E E+ +L + +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 426 IDYIEFI--------TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK---Y 474
+D+ +F+ T M V + L AF FD + G I+ EL A++K +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGV---KELRDAFREFDTNGDGEISTSELREAMRKLLGH 120
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+G + I+EII +VD++ DGR+++EEF MM +
Sbjct: 121 QVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAAD 419
K++AE + L++ F+ DT+ G I+ EL+ + K LG ++ ++ +++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 135
Query: 420 VDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 33/267 (12%)
Query: 70 IFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
+ G ++GRG FG + + A KS R+ + D +E +I+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKS--CRETLPPDLKAKFLQEARILKQYS-HPN 173
Query: 130 IVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMV----TVVHYCH 185
IV L G + + ++M+L GG+ + +G R QMV + Y
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE 230
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS------VFFKPGDVFKDLVGSAYYVAP 239
S +HRDL N L + E + LK +DFG+S V G + + V + AP
Sbjct: 231 SKCCIHRDLAARNCLVT---EKNVLKISDFGMSREEADGVXAASGGLRQVPVK---WTAP 284
Query: 240 EVLRRNYG---AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
E L NYG +E+D+WS G++L+ S G P+ + Q + + +G P P
Sbjct: 285 EAL--NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG----GRLPCPE 338
Query: 296 ISSSAK-DIVKKMLHADPKERLSAAEV 321
+ A ++++ +P +R S + +
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
++E F+ D DN G ++ EEL + L LG + +E+ + G ++ EF A
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFDLA 58
Query: 435 TMHM-------NRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKE 484
T E+ + + AF DK+ +G I EL L N+GDA T ++E
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLL--LNLGDALTSSEVEE 116
Query: 485 IIAEVDIDNDGRINYEEFAAMMRKGNP 511
++ EV + DG INYE F M+ G P
Sbjct: 117 LMKEVSVSGDGAINYESFVDMLVTGYP 143
Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 445 EHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDNDGRINYEEF 502
+ + + F+ FDKDN G +++EEL AL+ ++G T E+ G++N +EF
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALR--SLGKNPTNAELNTI-----KGQLNAKEF 55
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H N++ L+G V +I + G L D + + G ++
Sbjct: 80 DFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 137
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVF 227
+ R + + Y M +HRDL N L +S+ K +DFGLS F + +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLV---CKVSDFGLSRFLEDDTSDPTY 194
Query: 228 KDLVGSAY---YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
+G + APE ++ R + + +D+WS G++++ ++S G P+W T Q + +AI
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE 254
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ D+ P + S+ ++ D R +++N
Sbjct: 255 Q---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 292
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQF--ACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
F +ELG GQFGV V + + Q+ A K I + + +E E ++M +L+ H
Sbjct: 13 FLKELGTGQFGV---VKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HE 64
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
+V+L G + + +I + A G L + + H + + +C+ + + Y S
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPEVLRR 244
+HRDL N L + + +K +DFGLS + D + GS + + PEVL
Sbjct: 125 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 245 N-YGAEADIWSAGVILYILLS-GVPPF 269
+ + +++DIW+ GV+++ + S G P+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 41/249 (16%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 102
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----------------GH 164
M HL H NIV L GA V +I + C G+L + + K
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
S R + Q+ + + S +HRD+ N L ++ K DFGL+
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLA-----R 214
Query: 225 DVFKD----LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETE 274
D+ D + G+A ++APE + Y ++D+WS G++L+ + S G+ P+ G
Sbjct: 215 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 274
Query: 275 QSIFDAILR 283
S F +++
Sbjct: 275 NSKFYKLVK 283
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 58 LGKPMEDV---RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRK--LINRDDVE 112
L + +EDV + GR LG+G+FG K F ++ K +I D+E
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 113 DVRREVQIMHHLTGHRNIVELKG-AYEDRHSVNL-----IMDLCAGGELFDRIIAKGHYS 166
+ RE M H ++ +L G + R L I+ G+L ++A
Sbjct: 71 EFLREAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS---- 125
Query: 167 ERAAAN--------LCRQMVTV---VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDF 215
R N L R MV + + Y S +HRDL N + AED + DF
Sbjct: 126 -RIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADF 181
Query: 216 GLSVFFKPGDVFKDLVGSAY---YVAPEVLRRN-YGAEADIWSAGVILY-ILLSGVPPFW 270
GLS GD ++ S ++A E L N Y +D+W+ GV ++ I+ G P+
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 271 GETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLS 317
G I++ ++ G + P P D++ + ADPK+R S
Sbjct: 242 GIENAEIYNYLIGG--NRLKQP-PECMEEVYDLMYQCWSADPKQRPS 285
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I + C G L + +K + + A +L + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ ++ P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDP 193
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 254 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 130/286 (45%), Gaps = 35/286 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 27 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 86
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGH--YSERAAANLCRQMVT 179
H+ H N+V L GA + + +I++ C G L + +K + + +L + +T
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 180 VVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPG 224
+ H C+S V +HRDL N L S E + +K DFGL+ + P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPD 203
Query: 225 DVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAI 281
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 263
Query: 282 LRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 264 LKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 66.6 bits (161), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
++++ KE F+ D++ +G IT E L+ L + G R+ + ++ AD GNG I +
Sbjct: 2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQF 61
Query: 429 IEFITAT-MHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIA 487
EF++ M + E+ L +AF FD + +GYI L+ AL N+GD E
Sbjct: 62 PEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDAL--LNLGDRLKPHEFAE 119
Query: 488 EVDI--DNDGRINYEEFAAMM 506
+ I G+I Y+ F M
Sbjct: 120 FLGITETEKGQIRYDNFINTM 140
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L+EE+ ++E F D D +GTI +ELK LG + E+++ + D +G G
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKX 84
Query: 427 DYIEFITA-TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKY--NMGDAKTIK 483
++ +F+T T + + +E + KAF+ FD D +G I+ + L+ K+ N+ D + ++
Sbjct: 85 NFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE-LQ 143
Query: 484 EIIAEVDIDNDGRINYEEFAAMMRK 508
E I E D D DG ++ +EF + +K
Sbjct: 144 EXIDEADRDGDGEVSEQEFLRIXKK 168
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I++ C G L + +K + + A +L + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ + P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDP 202
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 263 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 13/211 (6%)
Query: 64 DVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDV-EDVRREVQIMH 122
D R + G + G G FGV Y +T A K +++ I +++ + +E+++
Sbjct: 19 DERPISVGGNKXGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEELKQQFDQEIKVXA 76
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIA---KGHYSERAAANLCRQMVT 179
H N+VEL G D + L+ G L DR+ S + +
Sbjct: 77 KCQ-HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAAN 135
Query: 180 VVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPGDVFKDLVGSAYY 236
+++ H +HRD+K N L E K +DFGL S F +VG+ Y
Sbjct: 136 GINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 237 VAPEVLRRNYGAEADIWSAGVILYILLSGVP 267
APE LR ++DI+S GV+L +++G+P
Sbjct: 193 XAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I + C G L + +K + + A +L + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ ++ P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDP 193
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 254 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 18/267 (6%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F E+GRG F Y +T + A + RKL + + + + E + + L H NI
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGLQ-HPNI 87
Query: 131 VELKGAYED----RHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVVHYCHS 186
V ++E + + L+ +L G L + + + CRQ++ + + H+
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 187 MG--VMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRR 244
++HRDLK +N + +K D GL+ K K ++G+ + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPT--GSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEE 204
Query: 245 NYGAEADIWSAG-VILYILLSGVPPFWGETEQSIFDAILRG--HIDFSSDPWPNISSSAK 301
Y D+++ G L S P + I+ + G F P + K
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV----K 260
Query: 302 DIVKKMLHADPKERLSAAEVLNHPWMR 328
+I++ + + ER S ++LNH + +
Sbjct: 261 EIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G+FG + + +A K S + L D ++ REV L H ++V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGV 189
A+ + + + + C GG L D I ++ E +L Q+ + Y HSM +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGDVF--------KDLVGSA 234
+H D+KP N S ++ P A++ G V FK GD+ + G +
Sbjct: 135 VHMDIKPSNIFISRTS--IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 235 YYVAPEVLRRNYG--AEADIWSAGVILYILLSGVPPF------WGETEQSIFDAILRGHI 286
++A EVL+ NY +ADI++ + + + +G P W E Q I
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI----- 246
Query: 287 DFSSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + S +++K M+H DP+ R SA ++ H
Sbjct: 247 -------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 26/228 (11%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKL-INRDDVEDVRREVQIMHHLTGHRNIV 131
R +G G+FG K ++ +I + K+ D E IM H NI+
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNII 86
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGV 189
L+G V ++ + G L D + K G ++ + R + + Y MG
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY 145
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAP 239
+HRDL N L +S+ K +DFGLS V +D +AY + AP
Sbjct: 146 VHRDLAARNILINSNLV---CKVSDFGLS------RVLEDDPEAAYTTRGGKIPIRWTAP 196
Query: 240 EVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
E + R + + +D+WS G++++ ++S G P+W T Q + A+ G+
Sbjct: 197 EAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY 244
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G+FG + + +A K S + L D ++ REV L H ++V
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGV 189
A+ + + + + C GG L D I ++ E +L Q+ + Y HSM +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGDVF--------KDLVGSA 234
+H D+KP N S ++ P A++ G V FK GD+ + G +
Sbjct: 137 VHMDIKPSNIFISRTS--IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 194
Query: 235 YYVAPEVLRRNYG--AEADIWSAGVILYILLSGVPPF------WGETEQSIFDAILRGHI 286
++A EVL+ NY +ADI++ + + + +G P W E Q I
Sbjct: 195 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI----- 248
Query: 287 DFSSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + S +++K M+H DP+ R SA ++ H
Sbjct: 249 -------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 123/318 (38%), Gaps = 72/318 (22%)
Query: 75 LGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHR 128
LG G FG V + HK + A K + K ++R E R E+Q++ HL
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRY-CEAARSEIQVLEHLNTTDPNSTF 77
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA--AANLCRQMVTVVHYCHS 186
V++ +E + ++ +L G +D I G R + Q+ V++ HS
Sbjct: 78 RCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 187 MGVMHRDLKPENFLFSSSAE----------------DSPLKATDFGLSVFFKPGDVFKDL 230
+ H DLKPEN LF S + +K DFG + + + L
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTL 194
Query: 231 VGSAYYVAPEV-LRRNYGAEADIWSAGVIL---YILLSGVPPFWGETEQSIFDAIL---- 282
V + +Y APEV L + D+WS G IL Y+ + P + ++ + IL
Sbjct: 195 VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLP 254
Query: 283 ---------RGHIDFSSDPWPNISSSAK------------------------DIVKKMLH 309
R + W SS+ + D+++KML
Sbjct: 255 KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314
Query: 310 ADPKERLSAAEVLNHPWM 327
DP +R++ E L HP+
Sbjct: 315 YDPAKRITLREALKHPFF 332
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G+FG + + +A K S + L D ++ REV L H ++V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGV 189
A+ + + + + C GG L D I ++ E +L Q+ + Y HSM +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGD------VFKDLV--GSA 234
+H D+KP N S ++ P A++ G V FK GD + V G +
Sbjct: 135 VHMDIKPSNIFISRTS--IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 192
Query: 235 YYVAPEVLRRNYG--AEADIWSAGVILYILLSGVPPF------WGETEQSIFDAILRGHI 286
++A EVL+ NY +ADI++ + + + +G P W E Q I
Sbjct: 193 RFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLPRI----- 246
Query: 287 DFSSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + S +++K M+H DP+ R SA ++ H
Sbjct: 247 -------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I++ C G L + +K + + A +L + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ + P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDP 193
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 254 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 119/279 (42%), Gaps = 44/279 (15%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
++G G+FG + + +A K S + L D ++ REV L H ++V
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK----GHYSERAAANLCRQMVTVVHYCHSMGV 189
A+ + + + + C GG L D I ++ E +L Q+ + Y HSM +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 190 MHRDLKPENFLFSSSAEDSPLKATDFG-------LSVFFKPGD------VFKDLV--GSA 234
+H D+KP N S ++ P A++ G V FK GD + V G +
Sbjct: 133 VHMDIKPSNIFISRTS--IPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS 190
Query: 235 YYVAPEVLRRNYG--AEADIWSAGVILYILLSGVPPF------WGETEQSIFDAILRGHI 286
++A EVL+ NY +ADI++ + + + +G P W E Q I
Sbjct: 191 RFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLPRI----- 244
Query: 287 DFSSDPWPNI-SSSAKDIVKKMLHADPKERLSAAEVLNH 324
P + S +++K M+H DP+ R SA ++ H
Sbjct: 245 -------PQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 123/284 (43%), Gaps = 40/284 (14%)
Query: 66 RNTYIFGRELGRGQFGVTYL-----VTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
R + RELG G FG +L ++ K A K++ L R +D +RE ++
Sbjct: 14 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR---KDFQREAEL 70
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELF--------DRII--------AKGH 164
+ +L H +IV+ G D + ++ + G+L D +I AKG
Sbjct: 71 LTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 165 YSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPG 224
++ Q+ + + Y S +HRDL N L ++ +K DFG+S
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL---VKIGDFGMSRDVYST 186
Query: 225 DVFKDLVGS-----AYYVAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSI 277
D ++ VG ++ PE ++ R + E+D+WS GVIL+ I G P++ + +
Sbjct: 187 DYYR--VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 244
Query: 278 FDAILRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEV 321
+ I +G + P D++ +P++RL+ E+
Sbjct: 245 IECITQGRVLERPRVCPK---EVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 15/154 (9%)
Query: 366 NLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
+L EEI L+E F+ D D G I +L + +G +E E+ +L + +++ G
Sbjct: 4 SLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGH 63
Query: 426 IDYIEFI--------TATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKK---Y 474
+D+ +F+ T M V + L AF FD + G I+ EL A++ +
Sbjct: 64 VDFDDFVELMGPKLLAETADMIGV---KELRDAFREFDTNGDGEISTSELREAMRALLGH 120
Query: 475 NMGDAKTIKEIIAEVDIDNDGRINYEEFAAMMRK 508
+G + I+EII +VD++ DGR+++EEF MM +
Sbjct: 121 QVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 361 KVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPK-LGTRLSESEVRQLMEAAD 419
K++AE + L++ F+ DT+ G I+ EL+ + LG ++ ++ +++ D
Sbjct: 76 KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135
Query: 420 VDGNGTIDYIEFI 432
++G+G +D+ EF+
Sbjct: 136 LNGDGRVDFEEFV 148
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 48/256 (18%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQI 120
RN FG+ LG G FG + + +D + A K + S + D+ E + E++I
Sbjct: 30 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKI 87
Query: 121 MHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRI-----------IAKGHYSE-- 167
M HL H NIV L GA V +I + C G+L + + +A G E
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 168 ----------RAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGL 217
R + Q+ + + S +HRD+ N L ++ K DFGL
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGL 204
Query: 218 SVFFKPGDVFKD----LVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVP 267
+ D+ D + G+A ++APE + Y ++D+WS G++L+ + S G+
Sbjct: 205 A-----RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 259
Query: 268 PFWGETEQSIFDAILR 283
P+ G S F +++
Sbjct: 260 PYPGILVNSKFYKLVK 275
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG K ++ C +I + K D D E IM H NI+ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHL 95
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G V +I + G L D + K G ++ + R + + + Y M +H
Sbjct: 96 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVH 154
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAPEV 241
RDL N L +S+ K +DFG+S V +D +AY + APE
Sbjct: 155 RDLAARNILVNSNLV---CKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ R + + +D+WS G++++ ++S G P+W + Q + AI G+
Sbjct: 206 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 36/287 (12%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + C++++ + L + + E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILI 76
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHY---SERAAANLCRQMV 178
H+ H N+V L GA + + +I + C G L + +K + + A +L + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 179 TVVHY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKP 223
T+ H C+S V +HRDL N L S E + +K DFGL+ + P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDP 193
Query: 224 GDVFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDA 280
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 253
Query: 281 ILRGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
L+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 254 RLKEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFITATMH-MNRVEREEHLYKAF 451
GTID+ EF+T M + EE + +AF
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAF 89
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Query: 173 LCRQMVTVVHYCHS-MGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV 231
+ + ++ Y H+ + HRD+KP N L + +K +DFG S + + K
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR---VKLSDFGESEYMVDKKI-KGSR 211
Query: 232 GSAYYVAPEVLRRNY---GAEADIWSAGVILYILLSGVPPFWGETEQ-SIFDAILRGHID 287
G+ ++ PE GA+ DIWS G+ LY++ V PF + +F+ I +I+
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 288 FSSD------PWPNISSSAK---------DIVKKMLHADPKERLSAAEVLNHPWM 327
+ D P N S+ D +K L +P ER+++ + L H W+
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N I ELG G FG ++ K+Q ++ + D E++ RE QIMH L
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD- 68
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCH 185
+ IV L G + ++ L+M++ GG L ++ K A L Q+ + Y
Sbjct: 69 NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE 127
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEV 241
+HRDL N L + K +DFGLS D + + + APE
Sbjct: 128 EKNFVHRDLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 184
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPF 269
+ R + + +D+WS GV ++ LS G P+
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G+G FG + ++ A K I ++K +N+ +E E+ H IV L
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHS--M 187
K + R+ + L+ ++ + L+D + + + NL R QM T + + + +
Sbjct: 122 KRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY 246
++H DLKPEN L + + S +K DFG S + G + S +Y +PEVL Y
Sbjct: 179 SIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETE 274
D+WS G IL + +G P F G E
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG K ++ C +I + K D D E IM H NI+ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHL 74
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G V +I + G L D + K G ++ + R + + + Y M +H
Sbjct: 75 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 133
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAPEV 241
RDL N L +S+ K +DFG+S V +D +AY + APE
Sbjct: 134 RDLAARNILVNSNLV---CKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ R + + +D+WS G++++ ++S G P+W + Q + AI G+
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 230
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 26/226 (11%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVEDVRREVQIMHHLTGHRNIVEL 133
+G G+FG K ++ C +I + K D D E IM H NI+ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNIIHL 80
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVMH 191
+G V +I + G L D + K G ++ + R + + + Y M +H
Sbjct: 81 EGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVH 139
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY----------YVAPEV 241
RDL N L +S+ K +DFG+S V +D +AY + APE
Sbjct: 140 RDLAARNILVNSNLV---CKVSDFGMS------RVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGH 285
+ R + + +D+WS G++++ ++S G P+W + Q + AI G+
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY 236
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 14/216 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G+G FG + ++ A K I ++K +N+ +E E+ H IV L
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 102
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHS--M 187
K + R+ + L+ ++ + L+D + + + NL R QM T + + + +
Sbjct: 103 KRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 159
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY 246
++H DLKPEN L + + S +K DFG S + G + S +Y +PEVL Y
Sbjct: 160 SIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
D+WS G IL + +G P F G E + I+
Sbjct: 217 DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F +DK+ GYI ++EL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMWDKNADGYIDLDELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
EF M+
Sbjct: 152 EFLEFMK 158
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L ++F+ D + G I +ELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 SEEE---LSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y EF+
Sbjct: 150 YDEFL 154
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F FDK+ GYI ++EL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
E+ M+
Sbjct: 152 EWLEFMK 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L ++F+ D + G I +ELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 SEEE---LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y E++
Sbjct: 150 YDEWL 154
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 40/229 (17%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRR-------E 117
V N + GR++G G FG YL T+ T ++ A K +E+V+ E
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------------LENVKTKHPQLLYE 52
Query: 118 VQIMHHLTGHRNIVELKG-AYEDRHSVNLIMDLCAGG--ELFDRIIAKGHYSERAAANLC 174
+I L G I ++ E ++V L+MDL +LF+ K S + L
Sbjct: 53 SKIYRILQGGTGIPNVRWFGVEGDYNV-LVMDLLGPSLEDLFNFCSRK--LSLKTVLMLA 109
Query: 175 RQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--------PGDV 226
QM+ V + HS +HRD+KP+NFL + + DFGL+ ++ P
Sbjct: 110 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRE 169
Query: 227 FKDLVGSAYYVAPEVLRRNYGAEA----DIWSAGVILYILLSGVPPFWG 271
K+L G+A Y + + + G E D+ S G +L L G P+ G
Sbjct: 170 NKNLTGTARYAS---VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 122/318 (38%), Gaps = 72/318 (22%)
Query: 75 LGRGQFG-VTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLT-----GHR 128
LG G FG V + HK + A K + K ++R E R E+Q++ HL
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRY-CEAARSEIQVLEHLNTTDPNSTF 77
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERA--AANLCRQMVTVVHYCHS 186
V++ +E + ++ +L G +D I G R + Q+ V++ HS
Sbjct: 78 RCVQMLEWFEHHGHICIVFEL-LGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
Query: 187 MGVMHRDLKPENFLFSSSAE----------------DSPLKATDFGLSVFFKPGDVFKDL 230
+ H DLKPEN LF S + +K DFG + + + L
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DDEHHSTL 194
Query: 231 VGSAYYVAPEV-LRRNYGAEADIWSAGVIL---YILLSGVPPFWGETEQSIFDAIL---- 282
V +Y APEV L + D+WS G IL Y+ + P + ++ + IL
Sbjct: 195 VXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLP 254
Query: 283 ---------RGHIDFSSDPWPNISSSAK------------------------DIVKKMLH 309
R + W SS+ + D+++KML
Sbjct: 255 KHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE 314
Query: 310 ADPKERLSAAEVLNHPWM 327
DP +R++ E L HP+
Sbjct: 315 YDPAKRITLREALKHPFF 332
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQ--FACKSISSRKLINRDDVEDVRREVQIMHHLTGHRN 129
G ++GRG +G Y KD K +A K I + RE+ ++ L H N
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELK-HPN 79
Query: 130 IVELKGAY---EDRHSVNLIMDLCAGGELFDRIIAKGHYSERA-----------AANLCR 175
++ L+ + DR V L+ D A +L+ I K H + +A +L
Sbjct: 80 VISLQKVFLSHADR-KVWLLFDY-AEHDLWH--IIKFHRASKANKKPVQLPRGMVKSLLY 135
Query: 176 QMVTVVHYCHSMGVMHRDLKPENFL-FSSSAEDSPLKATDFGLSVFF----KPGDVFKDL 230
Q++ +HY H+ V+HRDLKP N L E +K D G + F KP +
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 231 VGSAYYVAPEVL--RRNYGAEADIWSAGVILYILLSGVPPF 269
V + +Y APE+L R+Y DIW+ G I LL+ P F
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 117/267 (43%), Gaps = 38/267 (14%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G FG + H+ + + K + + + E REV+ + L H NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV-------KYNNEKAEREVKALAKL-DHVNIVHYN 70
Query: 135 GAYE------DRHSVN----------LIMDLCAGGELFDRI-IAKGHYSERAAA-NLCRQ 176
G ++ + S N + M+ C G L I +G ++ A L Q
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 177 MVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY 236
+ V Y HS +++RDLKP N + + +K DFGL K G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 237 VAPE-VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
++PE + ++YG E D+++ G+IL LL + E S F LR I SD +
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF---ETSKFFTDLRDGI--ISDIF-- 240
Query: 296 ISSSAKDIVKKMLHADPKERLSAAEVL 322
K +++K+L P++R + +E+L
Sbjct: 241 -DKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y GR +G G FGV + T+ QQ A K R + + D R +++ TG
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIP 69
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
N+ E H+V L++DL G L D + G +S + A +QM+ V H
Sbjct: 70 NVYYF--GQEGLHNV-LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125
Query: 188 GVMHRDLKPENFLFS--SSAEDSPLKATDFGLSVFFK--------PGDVFKDLVGSAYYV 237
+++RD+KP+NFL +S + + DFG+ F++ P K+L G+A Y+
Sbjct: 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 185
Query: 238 APEV-LRRNYGAEADIWSAGVILYILLSGVPPFWG 271
+ L R D+ + G + L G P+ G
Sbjct: 186 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGL G V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGL------GRVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 69 YIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHR 128
Y GR +G G FGV + T+ QQ A K R + + D R +++ TG
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIP 68
Query: 129 NIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGH-YSERAAANLCRQMVTVVHYCHSM 187
N+ E H+V L++DL G L D + G +S + A +QM+ V H
Sbjct: 69 NVYYF--GQEGLHNV-LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 124
Query: 188 GVMHRDLKPENFLFS--SSAEDSPLKATDFGLSVFFK--------PGDVFKDLVGSAYYV 237
+++RD+KP+NFL +S + + DFG+ F++ P K+L G+A Y+
Sbjct: 125 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 184
Query: 238 APEV-LRRNYGAEADIWSAGVILYILLSGVPPFWG 271
+ L R D+ + G + L G P+ G
Sbjct: 185 SINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 219
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++M+ + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H N++ L+G V +I + G L D + + G ++
Sbjct: 54 DFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQL 111
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFK---PGDVF 227
+ R + + Y M +HR L N L +S+ K +DFGLS F + +
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLV---CKVSDFGLSRFLEDDTSDPTY 168
Query: 228 KDLVGSAY---YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
+G + APE ++ R + + +D+WS G++++ ++S G P+W T Q + +AI
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE 228
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
+ D+ P + S+ ++ D R +++N
Sbjct: 229 Q---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 266
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 136/360 (37%), Gaps = 110/360 (30%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHL 124
V + Y +GRG +G YL K+ + A K ++ R + D + + RE+ I++
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN-RMFEDLIDCKRILREITILN-- 82
Query: 125 TGHRNIVELKGAYEDR-HSVNLIMDLCAGGELFDRI-IAKGHYSE--RAAANLCRQMVTV 180
LK Y R H + + DL EL+ + IA + + L Q V
Sbjct: 83 -------RLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKT 135
Query: 181 VHY--------CHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS-------------- 218
+ Y H G++HRDLKP N L + +D +K DFGL+
Sbjct: 136 ILYNLLLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDFGLARTINSDKDIHIVND 192
Query: 219 -----VFFKPGDVFKDL-------VGSAYYVAPE--VLRRNYGAEADIWSAGVILYILLS 264
+PG K+L V + +Y APE +L+ NY DIWS G I LL+
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
Query: 265 -------------------------------------------------GVPP---FWGE 272
G PP
Sbjct: 253 MMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCI 312
Query: 273 TEQSIFDAI----LRGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLNHPWMR 328
T+Q + I R ID S + +IS D+++ ML + ++R++ + L+HP+++
Sbjct: 313 TKQEVIKYIKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +G G FG K + ++ ++DD D E++++ L H NI
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-------------IAKGHYSERAAANLCRQM 177
+ L GA E R + L ++ G L D + IA S ++ L
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 178 VTVVH---YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVG- 232
V Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGR 202
Query: 233 -SAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR 259
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ N D++++ P ER S A++L
Sbjct: 260 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +G G FG K + ++ ++DD D E++++ L H NI
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-------------IAKGHYSERAAANLCRQM 177
+ L GA E R + L ++ G L D + IA S ++ L
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 178 VTVVH---YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVG- 232
V Y +HRDL N L E+ K DFGLS + +V+ K +G
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGR 192
Query: 233 -SAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR 249
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ N D++++ P ER S A++L
Sbjct: 250 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRK-LINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+G+G FG + ++ A K I ++K +N+ +E E+ H IV L
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCR----QMVTVVHYCHS--M 187
K + R+ + L+ ++ + L+D + + + NL R QM T + + + +
Sbjct: 122 KRHFMFRNHLCLVFEMLSYN-LYD--LLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL 178
Query: 188 GVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLR-RNY 246
++H DLKPEN L + + +K DFG S + G + S +Y +PEVL Y
Sbjct: 179 SIIHCDLKPENILLCNPKRXA-IKIVDFGSSC--QLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 247 GAEADIWSAGVILYILLSGVPPFWGETE 274
D+WS G IL + +G P F G E
Sbjct: 236 DLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 367 LSEEEIMGLKEMFKSMDT-DNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGT 425
LS ++ L+ F+ +T + SG ++ +++ L LG + ++S +RQL++ D GNG
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 426 IDYIEF--ITATM---HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMG-DA 479
ID+ F I A +N + ++ L +AF +DK+ +GYI+ + + L + + +
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 480 KTIKEIIAEVDIDNDGRINYEEFAAMMRKGN 510
+ + +I E+D D G +++EEF +M G+
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVMTGGD 157
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 352 MNKLKKVALKVIAENLSEEEIMG-LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESE 410
+ K + + + E ++ E++ L+E F+ D + +G I+ + ++ L +L LS +
Sbjct: 69 FDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSED 128
Query: 411 VRQLMEAADVDGNGTIDYIEFI 432
+ +++ D DG+GT+D+ EF+
Sbjct: 129 LDAMIDEIDADGSGTVDFEEFM 150
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 63 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQL 120
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 171
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 172 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
Query: 279 DAILRGH 285
A+ G+
Sbjct: 232 KAVDEGY 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 63 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 120
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 171
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 172 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 231
Query: 279 DAILRGH 285
A+ G+
Sbjct: 232 KAVDEGY 238
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F DK+ GYI ++EL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMXDKNADGYIDLDELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
EF M+
Sbjct: 152 EFLEFMK 158
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L ++F+ D + G I +ELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 SEEE---LSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y EF+
Sbjct: 150 YDEFL 154
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 388 GTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITATMHM----NRVER 443
G+I+ +EL + LG + E++++++ D DG+GT+D+ EF+ + ++ +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKS 93
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L F FDK+ GYI ++EL+ L+ G+ T I+E++ + D +NDGRI+Y+
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYD 151
Query: 501 EFAAMMR 507
E M+
Sbjct: 152 EXLEFMK 158
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEE L ++F+ D + G I +ELK L G ++E ++ +LM+ D + +G ID
Sbjct: 93 SEEE---LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 149
Query: 428 YIEFI 432
Y E +
Sbjct: 150 YDEXL 154
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++++ + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 80 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 137
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 138 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 188
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 189 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 248
Query: 279 DAILRGH 285
A+ G+
Sbjct: 249 KAVDEGY 255
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 90 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 147
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGLS V +D
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLS------RVLEDD 198
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 199 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 258
Query: 279 DAILRGH 285
A+ G+
Sbjct: 259 KAVDEGY 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 118/292 (40%), Gaps = 41/292 (14%)
Query: 63 EDVRNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRR 116
E RN FG+ LG G FG Y + D A K + S L R E +
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMS 98
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-------------- 162
E++++ +L H NIV L GA +I + C G+L + + K
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ Q+ + + S +HRDL N L + K DFGL+
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLA 215
Query: 219 VFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGE 272
K D + G+A ++APE + Y E+D+WS G+ L+ L S G P+ G
Sbjct: 216 RHIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 273 TEQSIFDAILR-GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
S F +++ G S + P + DI+K ADP +R + +++
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 34/265 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G+G+FG L ++ K C + N + E +M L H N+V+
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 250
Query: 133 LKGA-YEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANLCRQMVTVVHYCH 185
L G E++ + ++ + A G L D R + G + + ++C M Y
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM----EYLE 306
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-SAYYVAPEVLR- 243
+HRDL N L S ED+ K +DFGL+ K +D + APE LR
Sbjct: 307 GNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALRE 360
Query: 244 RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
+ + ++D+WS G++L+ + S G P+ + D + R + D + D
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCPPAVYD 417
Query: 303 IVKKMLHADPKER---LSAAEVLNH 324
++K H D R L E L H
Sbjct: 418 VMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 26/223 (11%)
Query: 72 GRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIV 131
G +G+G+FG Y H + A + I + N D ++ +REV + + T H N+V
Sbjct: 38 GELIGKGRFGQVY---HGRWHGEVAIRLIDIER-DNEDQLKAFKREV-MAYRQTRHENVV 92
Query: 132 ELKGAYEDRHSVNLIMDLCAGGELFDRII-AKGHYSERAAANLCRQMVTVVHYCHSMGVM 190
GA + +I LC G L+ + AK + +++V + Y H+ G++
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGIL 152
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGL---SVFFKPG---DVFKDLVGSAYYVAPEVLRR 244
H+DLK +N + ++ + TDFGL S + G D + G ++APE++R+
Sbjct: 153 HKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 245 ----------NYGAEADIWSAGVILYILLSGVPPFWGETEQSI 277
+ +D+++ G I Y L + PF + ++I
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 134/333 (40%), Gaps = 76/333 (22%)
Query: 65 VRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRD-DVE-DVRREVQIMH 122
+ N ++ R++G G FG L H D K+ +A K + + K R +E D+ +++Q
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQND- 91
Query: 123 HLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANL---CRQMVT 179
+ NIV+ G + + LI + G L++ II + +Y+ ++ C +++
Sbjct: 92 -DINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYE-IITRNNYNGFHIEDIKLYCIEILK 148
Query: 180 VVHYCHSMGVMHRDLKPENFL-----FSSS-----------------AEDSPLKATDFGL 217
++Y M + H DLKPEN L F S + + +K DFG
Sbjct: 149 ALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGC 208
Query: 218 SVFFKPGDVFKDLVGSAYYVAPEV-LRRNYGAEADIWSAGVILYILLSGVPPFWGETE-- 274
+ F D ++ + Y APEV L + +D+WS G +L L +G F
Sbjct: 209 ATF--KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266
Query: 275 -----QSIFDAILRGHI--------------DFSSDPWPNISSSAKDI--VKK------- 306
+SI I + + D WP +SS I VKK
Sbjct: 267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326
Query: 307 ------------MLHADPKERLSAAEVLNHPWM 327
+L DP R S AE+L H ++
Sbjct: 327 IKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 14 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSV-------FFK---PGDVFKDLVGSAY 235
+ +HRDL N L + ++ +K DFGL+ FFK PG+ +
Sbjct: 132 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGE------SPIF 182
Query: 236 YVAPEVLRRN-YGAEADIWSAGVILYILLSGV 266
+ APE L + + +D+WS GV+LY L + +
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 6/73 (8%)
Query: 437 HMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDN 493
HM+ + EE L +AF+ FDKD +GYI+ EL H + N+G+ T ++++I E D+D
Sbjct: 2 HMD-TDAEEELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDG 58
Query: 494 DGRINYEEFAAMM 506
DG++NYEEF MM
Sbjct: 59 DGQVNYEEFVKMM 71
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
+EEE LKE FK D D +G I+ EL+ + LG +L++ EV Q+++ AD+DG+G ++
Sbjct: 7 AEEE---LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 428 YIEFITATM 436
Y EF+ M
Sbjct: 64 YEEFVKMMM 72
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L EE+ + E F D +N G + + ELK + LG L + E+ L++ D +G +
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLM 76
Query: 427 DYIEF-ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEI 485
Y +F I + + + + + +AF+ FD D++G I+++ L K+ +G+ T +E+
Sbjct: 77 KYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 486 ---IAEVDIDNDGRINYEEFAAM 505
I E D+D DG IN EF A+
Sbjct: 135 RAMIEEFDLDGDGEINENEFIAI 157
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 17 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIAKGHYSE-----RAAANLCRQMVTVV 181
NIV+ KG R ++ LIM+ G L D + A + + + +C+ M
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM---- 130
Query: 182 HYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYY 236
Y + +HRDL N L + ++ +K DFGL+ P D V ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 237 VAPEVLRRN-YGAEADIWSAGVILYILLSGV 266
APE L + + +D+WS GV+LY L + +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 69
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 70 YAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 129 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 184
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 241
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 242 CWRKDPEER 250
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 67 NTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTG 126
N I ELG G FG ++ K+Q ++ + D E++ RE QIMH L
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD- 394
Query: 127 HRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKG-HYSERAAANLCRQMVTVVHYCH 185
+ IV L G + ++ L+M++ GG L ++ K A L Q+ + Y
Sbjct: 395 NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE 453
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSA----YYVAPEV 241
+HR+L N L + K +DFGLS D + + + APE
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPEC 510
Query: 242 LR-RNYGAEADIWSAGVILYILLS-GVPPF 269
+ R + + +D+WS GV ++ LS G P+
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 21/269 (7%)
Query: 62 MEDVRNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIM 121
ME R +ELG GQFGV L K + A K I + ++ +E Q M
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSE----DEFFQEAQTM 57
Query: 122 HHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSERAA-ANLCRQMVTV 180
L+ H +V+ G + + ++ + + G L + + + G E + +C +
Sbjct: 58 MKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 181 VHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YV 237
+ + S +HRDL N L D +K +DFG++ + D + VG+ + +
Sbjct: 117 MAFLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWS 172
Query: 238 APEVLRR-NYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPN 295
APEV Y +++D+W+ G++++ + S G P+ T + + +GH + P+
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYR----PH 228
Query: 296 ISS-SAKDIVKKMLHADPKERLSAAEVLN 323
++S + I+ H P++R + ++L+
Sbjct: 229 LASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 41/289 (14%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRREVQ 119
RN FG+ LG G FG Y + D A K + S L R E + E++
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELK 94
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----------------- 162
++ +L H NIV L GA +I + C G+L + + K
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
+ Q+ + + S +HRDL N L + K DFGL+
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDI 211
Query: 222 KPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275
K D + G+A ++APE + Y E+D+WS G+ L+ L S G P+ G
Sbjct: 212 K-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 270
Query: 276 SIFDAILR-GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
S F +++ G S + P + DI+K ADP +R + +++
Sbjct: 271 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 67
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 68 YAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 127 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 182
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 239
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 240 CWRKDPEER 248
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 118/292 (40%), Gaps = 41/292 (14%)
Query: 63 EDVRNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRR 116
E RN FG+ LG G FG Y + D A K + S L R E +
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMS 75
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-------------- 162
E++++ +L H NIV L GA +I + C G+L + + K
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ Q+ + + S +HRDL N L + K DFGL+
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA 192
Query: 219 VFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGE 272
K D + G+A ++APE + Y E+D+WS G+ L+ L S G P+ G
Sbjct: 193 RDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
Query: 273 TEQSIFDAILR-GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
S F +++ G S + P + DI+K ADP +R + +++
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 118/292 (40%), Gaps = 41/292 (14%)
Query: 63 EDVRNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRR 116
E RN FG+ LG G FG Y + D A K + S L R E +
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMS 98
Query: 117 EVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK-------------- 162
E++++ +L H NIV L GA +I + C G+L + + K
Sbjct: 99 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 163 ----GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS 218
+ Q+ + + S +HRDL N L + K DFGL+
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLA 215
Query: 219 VFFKPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGE 272
K D + G+A ++APE + Y E+D+WS G+ L+ L S G P+ G
Sbjct: 216 RDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
Query: 273 TEQSIFDAILR-GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
S F +++ G S + P + DI+K ADP +R + +++
Sbjct: 275 PVDSKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 51/280 (18%)
Query: 75 LGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVELK 134
+G G FG + H+ + + + + + + E REV+ + L H NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV-------KYNNEKAEREVKALAKL-DHVNIVHYN 71
Query: 135 GA-------------------YEDRHSVN----------LIMDLCAGGELFDRI-IAKGH 164
G Y+ +S N + M+ C G L I +G
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 165 YSERAAA-NLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKP 223
++ A L Q+ V Y HS ++HRDLKP N + + +K DFGL K
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKN 188
Query: 224 GDVFKDLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLSGVPPFWGETEQSIFDAIL 282
G+ Y++PE + ++YG E D+++ G+IL LL + E S F L
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF---ETSKFFTDL 245
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
R I SD + K +++K+L P++R + +E+L
Sbjct: 246 RDGI--ISDIF---DKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 25/187 (13%)
Query: 113 DVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAA 170
D E IM H NI+ L+G V ++ + G L D + K ++
Sbjct: 92 DFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQL 149
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
+ R + + + Y MG +HRDL N L +S+ K +DFGL+ V +D
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLV---CKVSDFGLA------RVLEDD 200
Query: 231 VGSAY----------YVAPEVLR-RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIF 278
+AY + +PE + R + + +D+WS G++L+ ++S G P+W + Q +
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI 260
Query: 279 DAILRGH 285
A+ G+
Sbjct: 261 KAVDEGY 267
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 41/289 (14%)
Query: 66 RNTYIFGRELGRGQFG-----VTYLVTHKDTKQQFACKSIS-SRKLINRDDVEDVRREVQ 119
RN FG+ LG G FG Y + D A K + S L R E + E++
Sbjct: 40 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER---EALMSELK 96
Query: 120 IMHHLTGHRNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAK----------------- 162
++ +L H NIV L GA +I + C G+L + + K
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 163 -GHYSERAAANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFF 221
+ Q+ + + S +HRDL N L + K DFGL+
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDI 213
Query: 222 KPGDVFKDLVGSAY----YVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQ 275
K D + G+A ++APE + Y E+D+WS G+ L+ L S G P+ G
Sbjct: 214 K-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 272
Query: 276 SIFDAILR-GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
S F +++ G S + P + DI+K ADP +R + +++
Sbjct: 273 SKFYKMIKEGFRMLSPEHAP---AEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDND 494
M + EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID D
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGD 58
Query: 495 GRINYEEFAAMM 506
G++NYEEF MM
Sbjct: 59 GQVNYEEFVQMM 70
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 6 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 62
Query: 428 YIEFI 432
Y EF+
Sbjct: 63 YEEFV 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 438 MNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDND 494
M + EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID D
Sbjct: 2 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGD 59
Query: 495 GRINYEEFAAMM 506
G++NYEEF MM
Sbjct: 60 GQVNYEEFVQMM 71
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 7 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 63
Query: 428 YIEFI 432
Y EF+
Sbjct: 64 YEEFV 68
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNM----SPEAFLQEAQVMKKLR-HEKLVQL 245
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 246 YAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL + + + G+ + + APE L +
Sbjct: 305 RDLRAANILV---GENLVCKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 360
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 417
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 418 CWRKDPEER 426
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNI 130
F +G G FG K + ++ ++DD D E++++ L H NI
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 131 VELKGAYEDRHSVNLIMDLCAGGELFDRI-------------IAKGHYSERAAANLCRQM 177
+ L GA E R + L ++ G L D + IA S ++ L
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 178 VTVVH---YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF-KDLVG- 232
V Y +HR+L N L E+ K DFGLS + +V+ K +G
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILV---GENYVAKIADFGLS---RGQEVYVKKTMGR 199
Query: 233 -SAYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFS 289
++A E L + Y +D+WS GV+L+ ++S G P+ G T +++ + +G +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YR 256
Query: 290 SDPWPNISSSAKDIVKKMLHADPKERLSAAEVL 322
+ N D++++ P ER S A++L
Sbjct: 257 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++++ + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE L +AF+ FDKD +GYI+ EL H + N+G+ T ++++I E D+D DG++NYE
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 501 EFAAMM 506
EF MM
Sbjct: 61 EFVKMM 66
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 375 LKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFITA 434
LKE FK D D +G I+ EL+ + LG +L++ EV Q+++ AD+DG+G ++Y EF+
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Query: 435 TM 436
M
Sbjct: 66 MM 67
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F R+LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 17 FLRQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L + + K Q+ + Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 135 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 190
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M + H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKIR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 79 YAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 138 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 193
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 250
Query: 307 MLHADPKER 315
DP+ER
Sbjct: 251 CWRKDPEER 259
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ + ++++I EVD D +G I++
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 67 EFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 62 GTIDFPEFLT 71
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ + ++++I EVD D +G I++
Sbjct: 8 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 67
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 68 EFLTMMAR 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 446 HLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYEEFAA 504
+AF FDKD G IT +EL ++ + ++++I EVD D +G I++ EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 505 MMRK 508
MM +
Sbjct: 71 MMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ + ++++I EVD D +G I++
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 67 EFLTMMAR 74
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 75 LGRGQFGVTY--LVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+G G+FG Y ++ K++ + + D E IM + H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS-HHNIIR 110
Query: 133 LKGAYEDRHSVNLIMDLCAGGELFDRIIAK--GHYSERAAANLCRQMVTVVHYCHSMGVM 190
L+G + +I + G L D+ + + G +S + R + + Y +M +
Sbjct: 111 LEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 191 HRDLKPENFLFSSSAEDSPLKATDFGLSVFFK--PGDVFKDLVGSA--YYVAPEVLR-RN 245
HRDL N L +S+ K +DFGLS + P + G + APE + R
Sbjct: 170 HRDLAARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 246 YGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAI 281
+ + +D+WS G++++ ++ G P+W + + AI
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 122/280 (43%), Gaps = 47/280 (16%)
Query: 73 RELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
RELG+G FG+ Y +D + + A K+++ + R+ +E + E +M T H
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFL-NEASVMKGFTCH 80
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE----------RAAANLCRQM 177
++V L G ++M+L A G+L + + +E + + ++
Sbjct: 81 -HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAYY- 236
+ Y ++ +HRDL N + A D +K DFG++ +D+ +AYY
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMV---AHDFTVKIGDFGMT---------RDIYETAYYR 187
Query: 237 -----------VAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
+APE L+ + +D+WS GV+L+ + S P+ G + + + ++
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 284 GHIDFSSDPWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
G D N D+++ +PK R + E++N
Sbjct: 248 GGYLDQPD---NCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ + ++++I EVD D +G I++
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 67 EFLTMMAR 74
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 129/284 (45%), Gaps = 34/284 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + ++++ + L + + E++I+
Sbjct: 26 RDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 85
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAKGHYSERAAANLCRQMVTVV 181
H+ H N+V L GA + + +I++ C G L + +K + +L + +T+
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN-EFVPYKDLYKDFLTLE 144
Query: 182 HY-CHSMGV------------MHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGDV 226
H C+S V +HRDL N L S E + +K DFGL+ ++ P V
Sbjct: 145 HLICYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYV 201
Query: 227 FK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILR 283
K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F L+
Sbjct: 202 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 261
Query: 284 GHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
+ P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 262 EGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 378 MFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDYIEFI---TA 434
+FK +D + G++++EE+KA + +E ++ + +A D+DGNG ID EF A
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 435 TMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEIIAEVDIDND 494
+ + + L ++ D D G +T EE+ KK+ G K + +I+ + D + D
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKF--GYEKVVDQIM-KADANGD 121
Query: 495 GRINYEEFAA 504
G I EEF A
Sbjct: 122 GYITLEEFLA 131
Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 352 MNKLKKVALKVIAENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEV 411
+ + K A V ++LS+E++ GLK ++K MD D G +T EE+ K G E V
Sbjct: 55 LAEFTKFAAAVKEQDLSDEKV-GLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVV 110
Query: 412 RQLMEAADVDGNGTIDYIEFI 432
Q+M+ AD +G+G I EF+
Sbjct: 111 DQIMK-ADANGDGYITLEEFL 130
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 364 AENLSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGN 423
A+ L+EE+I KE F D D GTIT +EL + LG +E+E++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 424 GTIDYIEFIT 433
GTID+ EF+T
Sbjct: 61 GTIDFPEFLT 70
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 442 EREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT-IKEIIAEVDIDNDGRINYE 500
E+ +AF FDKD G IT +EL ++ + ++++I EVD D +G I++
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 501 EFAAMMRK 508
EF MM +
Sbjct: 67 EFLTMMAR 74
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 111/265 (41%), Gaps = 34/265 (12%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G+G+FG L ++ K C + N + E +M L H N+V+
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 78
Query: 133 LKGA-YEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANLCRQMVTVVHYCH 185
L G E++ + ++ + A G L D R + G + + ++C M Y
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM----EYLE 134
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVG-SAYYVAPEVLR- 243
+HRDL N L S ED+ K +DFGL+ K +D + APE LR
Sbjct: 135 GNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALRE 188
Query: 244 RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKD 302
+ + ++D+WS G++L+ + S G P+ + D + R + D + +
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCPPAVYE 245
Query: 303 IVKKMLHADPKER---LSAAEVLNH 324
++K H D R L E L H
Sbjct: 246 VMKNCWHLDAAMRPSFLQLREQLEH 270
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID DG++NYE
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 501 EFAAMM 506
EF MM
Sbjct: 62 EFVQMM 67
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 428 YIEFI 432
Y EF+
Sbjct: 60 YEEFV 64
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 367 LSEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTI 426
L EE+ + E F D +N G + + ELK LG L + E+ L++ D +G
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLX 76
Query: 427 DYIEF-ITATMHMNRVEREEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKTIKEI 485
Y +F I + + + + + +AF+ FD D++G I+++ L K+ +G+ T +E+
Sbjct: 77 KYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKE--LGETLTDEEL 134
Query: 486 ---IAEVDIDNDGRINYEEFAAM 505
I E D+D DG IN EF A+
Sbjct: 135 RAXIEEFDLDGDGEINENEFIAI 157
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID DG++NYE
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 501 EFAAMM 506
EF MM
Sbjct: 63 EFVQMM 68
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 4 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 428 YIEFI 432
Y EF+
Sbjct: 61 YEEFV 65
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID DG++NYE
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYE 58
Query: 501 EFAAMM 506
EF MM
Sbjct: 59 EFVQMM 64
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 369 EEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTIDY 428
EEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++Y
Sbjct: 1 EEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 57
Query: 429 IEFI 432
EF+
Sbjct: 58 EEFV 61
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 444 EEHLYKAFEYFDKDNSGYITMEELEHALKKYNMGDAKT---IKEIIAEVDIDNDGRINYE 500
EE + +AF FDKD +GYI+ EL H + N+G+ T + E+I E DID DG++NYE
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMT--NLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 501 EFAAMM 506
EF MM
Sbjct: 62 EFVQMM 67
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 368 SEEEIMGLKEMFKSMDTDNSGTITFEELKAGLPKLGTRLSESEVRQLMEAADVDGNGTID 427
SEEEI +E F+ D D +G I+ EL+ + LG +L++ EV +++ AD+DG+G ++
Sbjct: 3 SEEEI---REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 59
Query: 428 YIEFI 432
Y EF+
Sbjct: 60 YEEFV 64
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 17 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 74
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 135 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 190
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 36/266 (13%)
Query: 73 RELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVE 132
+ +G+G+FG L ++ K C + N + E +M L H N+V+
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLR-HSNLVQ 63
Query: 133 LKGA-YEDRHSVNLIMDLCAGGELFD------RIIAKGHYSERAAANLCRQMVTVVHYCH 185
L G E++ + ++ + A G L D R + G + + ++C M Y
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM----EYLE 119
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGS--AYYVAPEVLR 243
+HRDL N L S ED+ K +DFGL+ K +D G + APE LR
Sbjct: 120 GNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQD-TGKLPVKWTAPEALR 172
Query: 244 -RNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAK 301
+ + ++D+WS G++L+ + S G P+ + D + R + D +
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCPPAVY 229
Query: 302 DIVKKMLHADPKER---LSAAEVLNH 324
+++K H D R L E L H
Sbjct: 230 EVMKNCWHLDAAMRPSFLQLREQLEH 255
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 71
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 72 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 131 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 186
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 243
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 244 CWRKEPEER 252
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 20 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 77
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 138 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 193
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELFTYI 220
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 14 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 132 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 187
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 45 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 102
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 163 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 218
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 18 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 75
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 136 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 191
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELFTYI 218
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 327
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 328 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 387 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 442
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 499
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 500 CWRKEPEER 508
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 28/243 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDT--KQQFACKSISSRKLINRDDVEDVRREVQIMHH 123
R+ + RELG G FG +L + +Q ++ + K + + +D RE +++ +
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTN 71
Query: 124 LTGHRNIVELKGAYEDRHSVNLIMDLCAGGEL--FDR-------IIAKGH----YSERAA 170
L H +IV+ G + + ++ + G+L F R ++A+G+ ++
Sbjct: 72 LQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQM 130
Query: 171 ANLCRQMVTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDL 230
++ +Q+ + Y S +HRDL N L E+ +K DFG+S D ++
Sbjct: 131 LHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENLLVKIGDFGMSRDVYSTDYYR-- 185
Query: 231 VGS-----AYYVAPE-VLRRNYGAEADIWSAGVILY-ILLSGVPPFWGETEQSIFDAILR 283
VG ++ PE ++ R + E+D+WS GV+L+ I G P++ + + + I +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
Query: 284 GHI 286
G +
Sbjct: 246 GRV 248
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 13 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 70
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 131 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 186
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFTYI 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 19 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 76
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 137 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 192
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFTYI 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 12 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 69
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 130 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 185
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFTYI 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 304 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 359
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 416
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 417 CWRKEPEER 425
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 34/285 (11%)
Query: 66 RNTYIFGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKL---INRDDVEDVRREVQIMH 122
R+ G+ LGRG FG + ++++ + L + + E++I+
Sbjct: 28 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILI 87
Query: 123 HLTGHRNIVELKGAY-EDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAAANLCRQMVTV 180
H+ H N+V L GA + + +I++ C G L + +K + +L + +T+
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 181 VH-------------YCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLS--VFFKPGD 225
H + S +HRDL N L S E + +K DFGL+ + P
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDX 204
Query: 226 VFK-DLVGSAYYVAPE-VLRRNYGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAIL 282
V K D ++APE + R Y ++D+WS GV+L+ + S G P+ G F L
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264
Query: 283 RGHIDFSSDPWPNISSSAKDIVKKML---HADPKERLSAAEVLNH 324
+ + P+ ++ ++ + ML H +P +R + +E++ H
Sbjct: 265 KEGTRMRA---PDYTTP--EMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 112/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 304 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 359
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 416
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 417 CWRKEPEER 425
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 14 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 71
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 132 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 187
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 21 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 78
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 139 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 194
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELFTYI 221
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 32 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 89
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 150 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 205
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 71 FGRELGRGQFGVTYLVTHKDTKQQFACKSISSRKLIN--RDDVEDVRREVQIMHHLTGHR 128
F ++LG+G FG + + D Q + ++ +KL + + + D RE++I+ L H
Sbjct: 32 FLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HD 89
Query: 129 NIVELKGAYED--RHSVNLIMDLCAGGELFDRIIA-KGHYSERAAANLCRQMVTVVHYCH 185
NIV+ KG R ++ LIM+ G L D + K Q+ + Y
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 186 SMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLV-----GSAYYVAPE 240
+ +HRDL N L + ++ +K DFGL+ P D V ++ APE
Sbjct: 150 TKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPE 205
Query: 241 VLRRN-YGAEADIWSAGVILYILLSGV 266
L + + +D+WS GV+LY L + +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 121/272 (44%), Gaps = 31/272 (11%)
Query: 73 RELGRGQFGVTYLVTHKD-----TKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGH 127
RELG+G FG+ Y +D + + A K+++ + R+ +E + E +M T H
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL-RERIEFL-NEASVMKGFTCH 79
Query: 128 RNIVELKGAYEDRHSVNLIMDLCAGGELFDRIIAKGHYSE----------RAAANLCRQM 177
++V L G ++M+L A G+L + + +E + + ++
Sbjct: 80 -HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 178 VTVVHYCHSMGVMHRDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVF----KDLVGS 233
+ Y ++ +HRDL N + A D +K DFG++ D + K L+
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMV---AHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-P 194
Query: 234 AYYVAPEVLRRN-YGAEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSD 291
++APE L+ + +D+WS GV+L+ + S P+ G + + + ++ G D
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 254
Query: 292 PWPNISSSAKDIVKKMLHADPKERLSAAEVLN 323
N D+++ +PK R + E++N
Sbjct: 255 ---NCPERVTDLMRMCWQFNPKMRPTFLEIVN 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 68
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 69 YAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 127
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + G+ + + APE L +
Sbjct: 128 RDLRAANILV---GENLVCKVADFGLARLIEDNEXTAR-QGAKFPIKWTAPEAALYGRFT 183
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 184 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 240
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 241 CWRKEPEER 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 21/249 (8%)
Query: 74 ELGRGQFGVTYLVTHKDTKQQFACKSISSRKLINRDDVEDVRREVQIMHHLTGHRNIVEL 133
+LG+G FG ++ T T + A K++ + E +E Q+M L H +V+L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 75
Query: 134 KGAYEDRHSVNLIMDLCAGGELFDRIIAK-GHYSERAA-ANLCRQMVTVVHYCHSMGVMH 191
+ + ++ + G L D + + G Y ++ Q+ + + Y M +H
Sbjct: 76 YAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVH 134
Query: 192 RDLKPENFLFSSSAEDSPLKATDFGLSVFFKPGDVFKDLVGSAY---YVAPE-VLRRNYG 247
RDL+ N L E+ K DFGL+ + + + G+ + + APE L +
Sbjct: 135 RDLRAANILV---GENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFT 190
Query: 248 AEADIWSAGVILYILLS-GVPPFWGETEQSIFDAILRGHIDFSSDPWPNISSSAKDIVKK 306
++D+WS G++L L + G P+ G + + D + RG+ P S D++ +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP---PECPESLHDLMCQ 247
Query: 307 MLHADPKER 315
+P+ER
Sbjct: 248 CWRKEPEER 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,357,560
Number of Sequences: 62578
Number of extensions: 625749
Number of successful extensions: 6290
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 428
Number of HSP's that attempted gapping in prelim test: 1981
Number of HSP's gapped (non-prelim): 2058
length of query: 520
length of database: 14,973,337
effective HSP length: 103
effective length of query: 417
effective length of database: 8,527,803
effective search space: 3556093851
effective search space used: 3556093851
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)