BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010019
(520 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IFQ|A Chain A, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
pdb|3IFQ|B Chain B, Interction Of Plakoglobin And Beta-Catenin With Desmosomal
Cadherins
Length = 553
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDS-NKSAIIENGGMDKLIVVSARFSD 413
G++++L+ + + + V LS L ++S NK+ + +N G++ LI R D
Sbjct: 265 GLESVLKILVNQLSVDDVNVLTCATGTLSNLTCNNSKNKTLVTQNSGVEALIHAILRAGD 324
Query: 414 DASVLQEVMSIITVLSLRSPEN--AARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRN 471
+ + + + L+ R PE A ++ G AI +L PN L +++ +IRN
Sbjct: 325 KDDITEPAVCALRHLTSRHPEAEMAQNSVRLNYGIPAIVKLLNQPNQWPLVKATIGLIRN 384
Query: 472 L 472
L
Sbjct: 385 L 385
>pdb|4DBA|A Chain A, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|B Chain B, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|C Chain C, Designed Armadillo Repeat Protein (Yiim3aii)
pdb|4DBA|D Chain D, Designed Armadillo Repeat Protein (Yiim3aii)
Length = 210
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 344 DEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLA-GSDSNKSAIIENGGMD 402
+E ++V + G + AL++ + N+ + + LS +A G + A+I+ G +
Sbjct: 44 NEQIQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASGGNEQIQAVIDAGALP 99
Query: 403 KLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQ 462
L+ + + S + +LQE + ++ ++ E ++AG+ +Q +L PN Q LQ
Sbjct: 100 ALVQLLS--SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ-LLSSPNEQILQ 156
Query: 463 RSSCFMIRNLVARNPENRKLLLSNG-VEKLIR-QAKENHEICKDAATDALRDL 513
+ + + N+ + E ++ + G +EKL + Q+ EN +I K+ A +AL L
Sbjct: 157 E-ALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKE-AQEALEKL 207
>pdb|4DB6|A Chain A, Designed Armadillo Repeat Protein (Yiiim3aii)
Length = 210
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 344 DEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLA-GSDSNKSAIIENGGMD 402
+E ++V + G + AL++ + N+ + + LS +A G + A+I+ G +
Sbjct: 44 NEQIQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASGGNEQIQAVIDAGALP 99
Query: 403 KLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQ 462
L+ + + S + +LQE + ++ ++ E ++AG+ +Q +L PN Q LQ
Sbjct: 100 ALVQLLS--SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ-LLSSPNEQILQ 156
Query: 463 RSSCFMIRNLVARNPENRKLLLSNG-VEKLIR-QAKENHEICKDAATDALRDL 513
+ + + N+ + E ++ + G +EKL + Q+ EN +I K+ A +AL L
Sbjct: 157 E-ALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKE-AQEALEKL 207
>pdb|4DB8|A Chain A, Designed Armadillo-Repeat Protein
pdb|4DB8|B Chain B, Designed Armadillo-Repeat Protein
pdb|4DB8|C Chain C, Designed Armadillo-Repeat Protein
pdb|4DB8|D Chain D, Designed Armadillo-Repeat Protein
Length = 252
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 344 DEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLA-GSDSNKSAIIENGGMD 402
+E ++V + G + AL++ + N+ + + LS +A G + A+I+ G +
Sbjct: 86 NEQIQAVIDAGALPALVQLLSSP----NEQILQEALWALSNIASGGNEQIQAVIDAGALP 141
Query: 403 KLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQ 462
L+ + + S + +LQE + ++ ++ E ++AG+ +Q +L PN Q LQ
Sbjct: 142 ALVQLLS--SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ-LLSSPNEQILQ 198
Query: 463 RSSCFMIRNLVARNPENRKLLLSNG-VEKLIR-QAKENHEICKDAATDALRDL 513
+ + + N+ + E ++ + G +EKL + Q+ EN +I K+ A +AL L
Sbjct: 199 E-ALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKE-AQEALEKL 249
>pdb|3M0E|A Chain A, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|B Chain B, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|C Chain C, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|D Chain D, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|E Chain E, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|F Chain F, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
pdb|3M0E|G Chain G, Crystal Structure Of The Atp-Bound State Of Walker B
Mutant Of Ntrc1 Atpase Domain
Length = 266
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 155 ELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSC----LKTMALLVHDVQST 210
EL G +G+ AV++K G EL G LD+ L+ A L+ ++S
Sbjct: 86 ELFGYEKGAFTGAVSSKEGFFELAD--------GGTLFLDAIGELSLEAQAKLLRVIESG 137
Query: 211 ETFRTGGGPKLLVNILI 227
+ +R GG ++ VN+ I
Sbjct: 138 KFYRLGGRKEIEVNVRI 154
>pdb|2Z6H|A Chain A, Crystal Structure Of Beta-Catenin Armadillo Repeat Region
And Its C-Terminal Domain
Length = 644
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 206 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 258
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 259 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 318
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 319 DREDITEPAICALRHL 334
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 368 LQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSI 424
L G+ + + C+ +LS L ++ NK + + GG++ L+ R D + + +
Sbjct: 271 LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICA 330
Query: 425 ITVLSLR--SPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKL 482
+ L+ R E A A+ G + +L P+ L +++ +IRNL A P N
Sbjct: 331 LRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNL-ALCPANHAP 389
Query: 483 LLSNG-VEKLIRQAKENHE 500
L G + +L++ H+
Sbjct: 390 LREQGAIPRLVQLLVRAHQ 408
>pdb|1NY6|A Chain A, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|B Chain B, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|C Chain C, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|D Chain D, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|E Chain E, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|F Chain F, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|G Chain G, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|H Chain H, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|I Chain I, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|J Chain J, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|K Chain K, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|L Chain L, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|M Chain M, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
pdb|1NY6|N Chain N, Crystal Structure Of Sigm54 Activator (aaa+ Atpase) In The
Active State
Length = 267
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 155 ELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSC----LKTMALLVHDVQST 210
EL G +G+ AV++K G EL G LD L+ A L+ ++S
Sbjct: 87 ELFGYEKGAFTGAVSSKEGFFELAD--------GGTLFLDEIGELSLEAQAKLLRVIESG 138
Query: 211 ETFRTGGGPKLLVNILI 227
+ +R GG ++ VN+ I
Sbjct: 139 KFYRLGGRKEIEVNVRI 155
>pdb|1I7X|A Chain A, Beta-CateninE-Cadherin Complex
pdb|1I7X|C Chain C, Beta-CateninE-Cadherin Complex
pdb|1I7W|A Chain A, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1I7W|C Chain C, Beta-CateninPHOSPHORYLATED E-Cadherin Complex
pdb|1JPP|A Chain A, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1JPP|B Chain B, The Structure Of A Beta-Catenin Binding Repeat From
Adenomatous Polyposis Coli (Apc) In Complex With
Beta-Catenin
pdb|1M1E|A Chain A, Beta-Catenin Armadillo Repeat Domain Bound To Icat
pdb|1V18|A Chain A, The Crystal Structure Of Beta-Catenin Armadillo Repeat
Complexed With A Phosphorylated Apc 20mer Repeat
Length = 538
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 210 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 262
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 263 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 322
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 323 DREDITEPAICALRHL 338
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 264 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 321
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 322 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 381
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 382 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 412
>pdb|1JPW|A Chain A, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|B Chain B, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
pdb|1JPW|C Chain C, Crystal Structure Of A Human Tcf-4 BETA-Catenin Complex
Length = 540
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 213 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 265
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 266 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 325
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 326 DREDITEPAICALRHL 341
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 267 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 324
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 325 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 384
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 385 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 415
>pdb|1G3J|A Chain A, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1G3J|C Chain C, Crystal Structure Of The Xtcf3-CbdBETA-Catenin Armadillo
Repeat Complex
pdb|1TH1|A Chain A, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
pdb|1TH1|B Chain B, Beta-Catenin In Complex With A Phosphorylated Apc 20aa
Repeat Fragment
Length = 532
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 211 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 263
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 264 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 323
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 324 DREDITEPAICALRHL 339
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 265 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 322
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 323 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 382
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 383 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 413
>pdb|1QZ7|A Chain A, Beta-Catenin Binding Domain Of Axin In Complex With Beta-
Catenin
Length = 533
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 211 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 263
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 264 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 323
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 324 DREDITEPAICALRHL 339
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 265 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 322
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 323 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 382
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 383 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 413
>pdb|3OUW|A Chain A, Structure Of Beta-Catenin With Lef-1
pdb|3OUX|A Chain A, Structure Of Beta-Catenin With Phosphorylated Lef-1
Length = 540
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 212 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 264
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 265 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 324
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 325 DREDITEPAICALRHL 340
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 266 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 323
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 324 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 383
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 384 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 414
>pdb|3CTO|A Chain A, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3CTO|B Chain B, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3CTO|C Chain C, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3CTO|D Chain D, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3CTO|E Chain E, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3D55|A Chain A, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3D55|B Chain B, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3D55|C Chain C, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
pdb|3D55|D Chain D, Crystal Structure Of M. Tuberculosis Yefm Antitoxin
Length = 91
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 412 SDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLA 448
+DD QE TV LRSPENA R MEA + D A
Sbjct: 40 ADDYDAWQE-----TVYLLRSPENARRLMEAVARDKA 71
>pdb|3TX7|A Chain A, Crystal Structure Of Lrh-1BETA-Catenin Complex
Length = 527
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 207 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 259
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 260 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 319
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 320 DREDITEPAICALRHL 335
>pdb|1LUJ|A Chain A, Crystal Structure Of The Beta-CateninICAT COMPLEX
Length = 514
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 194 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 246
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 247 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 306
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 307 DREDITEPAICALRHL 322
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 248 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 305
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 306 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 365
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 366 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 396
>pdb|4DJS|A Chain A, Structure Of Beta-Catenin In Complex With A Stapled
Peptide Inhibitor
Length = 518
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 196 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 248
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 249 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 308
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 309 DREDITEPAICALRHL 324
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 250 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 307
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 308 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 367
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 368 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 398
>pdb|1JDH|A Chain A, Crystal Structure Of Beta-Catenin And Htcf-4
Length = 529
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 209 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 261
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 262 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 321
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 322 DREDITEPAICALRHL 337
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 263 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 320
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 321 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 380
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 381 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 411
>pdb|2BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 516
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 194 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 246
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 247 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 306
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 307 DREDITEPAICALRHL 322
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 248 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 305
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 306 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 365
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 366 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 396
>pdb|2GL7|A Chain A, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
pdb|2GL7|D Chain D, Crystal Structure Of A Beta-CateninBCL9TCF4 COMPLEX
Length = 550
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 207 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 259
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 260 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 319
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 320 DREDITEPAICALRHL 335
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 261 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 318
Query: 412 SDDASVLQEVMSIITVLSLR--SPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 319 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 378
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 379 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 409
>pdb|1NY5|A Chain A, Crystal Structure Of Sigm54 Activator (Aaa+ Atpase) In The
Inactive State
pdb|1NY5|B Chain B, Crystal Structure Of Sigm54 Activator (Aaa+ Atpase) In The
Inactive State
Length = 387
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 155 ELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSC----LKTMALLVHDVQST 210
EL G +G+ AV++K G EL G LD L+ A L+ ++S
Sbjct: 207 ELFGYEKGAFTGAVSSKEGFFELAD--------GGTLFLDEIGELSLEAQAKLLRVIESG 258
Query: 211 ETFRTGGGPKLLVNILI 227
+ +R GG ++ VN+ I
Sbjct: 259 KFYRLGGRKEIEVNVRI 275
>pdb|1T08|A Chain A, Crystal Structure Of Beta-CateninICAT HELICAL
DomainUNPHOSPHORYLATED APC R3
Length = 519
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 198 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 250
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIRQAKE-- 497
E G L L + + + ++ NL N +N+ ++ G+E L+R
Sbjct: 251 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 310
Query: 498 NHEICKDAATDALRDL 513
+ E + A ALR L
Sbjct: 311 DREDITEPAICALRHL 326
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 9/152 (5%)
Query: 355 GIDALLRCIDDSGLQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARF 411
G++ LL + L G+ + + C+ +LS L ++ NK + + GG++ L+ R
Sbjct: 252 GMEGLLGTLVQ--LLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA 309
Query: 412 SDDASVLQEVMSIITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMI 469
D + + + + L+ R E A A+ G + +L P+ L +++ +I
Sbjct: 310 GDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLI 369
Query: 470 RNLVARNPENRKLLLSNG-VEKLIRQAKENHE 500
RNL A P N L G + +L++ H+
Sbjct: 370 RNL-ALCPANHAPLREQGAIPRLVQLLVRAHQ 400
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 381 LLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM 440
+L L+ SNK AI+E GGM L +D + L + + +LR+ +AA
Sbjct: 342 VLKVLSVCSSNKPAIVEAGGMQAL---GLHLTDPSQRLVQN----CLWTLRNLSDAATKQ 394
Query: 441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS-NGVEKLIR---QAK 496
E G L L + + + ++ NL N +N+ ++ G+E L+R +A
Sbjct: 395 EGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAG 454
Query: 497 ENHEICKDAATDALRDL 513
+ +I + A ALR L
Sbjct: 455 DREDITEPAIC-ALRHL 470
>pdb|3OEI|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
Length = 98
Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 412 SDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLA 448
+DD QE TV LRSPENA R MEA + D A
Sbjct: 40 ADDYDAWQE-----TVYLLRSPENARRLMEAVARDXA 71
>pdb|3BCT|A Chain A, The Armadillo Repeat Region From Murine Beta-Catenin
Length = 470
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Query: 368 LQGNKTVARICCS--LLSKLAGSD-SNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSI 424
L G+ + + C+ +LS L ++ NK + + GG++ L+ R D + + +
Sbjct: 216 LLGSDDINVVTCAAGILSNLTCNNYKNKXXVCQVGGIEALVRTVLRAGDREDITEPAICA 275
Query: 425 ITVLSLRS--PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKL 482
+ L+ R E A A+ G + +L P+ L +++ +IRNL A P N
Sbjct: 276 LRHLTSRHQEAEXAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNL-ALCPANHAP 334
Query: 483 LLSNG-VEKLIRQAKENHE 500
L G + +L++ H+
Sbjct: 335 LREQGAIPRLVQLLVRAHQ 353
>pdb|3OEI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|M Chain M, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
pdb|3OEI|N Chain N, Crystal Structure Of Mycobacterium Tuberculosis Reljk
(Rv3357-Rv3358- Relbe3)
Length = 98
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 412 SDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLA 448
+DD QE TV LRSPENA R MEA + D A
Sbjct: 40 ADDYDAWQE-----TVYLLRSPENARRLMEAVARDKA 71
>pdb|3NMZ|A Chain A, Crytal Structure Of Apc Complexed With Asef
pdb|3NMZ|B Chain B, Crytal Structure Of Apc Complexed With Asef
Length = 458
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 335 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 394
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNGVEKLIRQ-AKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G +++ H++ + ALR+L
Sbjct: 395 IVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 448
>pdb|3AU3|A Chain A, Crystal Structure Of Armadillo Repeat Domain Of Apc
Length = 344
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 228 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 287
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNG-VEKLIRQAKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G V L H+ + ALR+L
Sbjct: 288 IVSNACGTLWNLSARNPKDQEALWDXGAVSXLKNLIHSKHKXIAXGSAAALRNL 341
>pdb|3NMX|A Chain A, Crystal Structure Of Apc Complexed With Asef
pdb|3NMX|B Chain B, Crystal Structure Of Apc Complexed With Asef
pdb|3NMX|C Chain C, Crystal Structure Of Apc Complexed With Asef
Length = 354
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 219 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 278
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNGVEKLIRQ-AKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G +++ H++ + ALR+L
Sbjct: 279 IVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 332
>pdb|3NMW|A Chain A, Crytal Structure Of Armadillo Repeats Domain Of Apc
pdb|3NMW|B Chain B, Crytal Structure Of Armadillo Repeats Domain Of Apc
Length = 354
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 219 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 278
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNG-VEKLIRQAKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G V L H+ + ALR+L
Sbjct: 279 IVSNACGTLWNLSARNPKDQEALWDXGAVSXLKNLIHSKHKXIAXGSAAALRNL 332
>pdb|1XQR|A Chain A, Crystal Structure Of The Hspbp1 Core Domain
pdb|1XQR|B Chain B, Crystal Structure Of The Hspbp1 Core Domain
Length = 296
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 457 NAQQLQRSSCFMIRNLVARNPENRKLLLSNG-VEKLIRQAKENH 499
Q+L+ S F+++NL+ +PE++ L S G V++L+ + H
Sbjct: 179 QVQKLKVKSAFLLQNLLVGHPEHKGTLCSXGXVQQLVALVRTEH 222
>pdb|3T7U|A Chain A, A New Crytal Structure Of Apc-Arm
pdb|3T7U|B Chain B, A New Crytal Structure Of Apc-Arm
Length = 378
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 219 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 278
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNGVEKLIRQ-AKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G +++ H++ + ALR+L
Sbjct: 279 IVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 332
>pdb|1XQS|A Chain A, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
pdb|1XQS|B Chain B, Crystal Structure Of The Hspbp1 Core Domain Complexed With
The Fragment Of Hsp70 Atpase Domain
Length = 280
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 457 NAQQLQRSSCFMIRNLVARNPENRKLLLSNG-VEKLIRQAKENHEICKDAATDALRDLGL 515
Q+L+ S F+++NL+ +PE++ L S G V++L+ + H + AL L
Sbjct: 163 QVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVT 222
Query: 516 D 516
D
Sbjct: 223 D 223
>pdb|3QHE|A Chain A, Crystal Structure Of The Complex Between The Armadillo
Repeat Domain Of Adenomatous Polyposis Coli And The
Tyrosine-Rich Domain Of Sam68
pdb|3QHE|C Chain C, Crystal Structure Of The Complex Between The Armadillo
Repeat Domain Of Adenomatous Polyposis Coli And The
Tyrosine-Rich Domain Of Sam68
Length = 337
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 424 IITVLSLRSPENAARAMEAGSGDL---------------------AIQAMLKFPNAQQLQ 462
++ L+ RS N +E+G G L +Q +L+ + L
Sbjct: 221 LVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLT 280
Query: 463 --RSSCFMIRNLVARNPENRKLLLSNGVEKLIRQ-AKENHEICKDAATDALRDL 513
++C + NL ARNP++++ L G +++ H++ + ALR+L
Sbjct: 281 IVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 334
>pdb|3AMJ|B Chain B, The Crystal Structure Of The Heterodimer Of M16b Peptidase
From Sphingomonas Sp. A1
pdb|3AMJ|D Chain D, The Crystal Structure Of The Heterodimer Of M16b Peptidase
From Sphingomonas Sp. A1
Length = 424
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 374 VARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSP 433
VA + SL+ AG+ S KSA+ EN D+L + AR A + S + VLS +
Sbjct: 46 VASMTASLMD--AGTGSGKSALDENAIADRLADIGARLGGGAEADRASFS-LRVLSSPAE 102
Query: 434 ENAA 437
N+A
Sbjct: 103 RNSA 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,668,376
Number of Sequences: 62578
Number of extensions: 508757
Number of successful extensions: 1585
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1518
Number of HSP's gapped (non-prelim): 134
length of query: 520
length of database: 14,973,337
effective HSP length: 103
effective length of query: 417
effective length of database: 8,527,803
effective search space: 3556093851
effective search space used: 3556093851
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)