Query         010019
Match_columns 520
No_of_seqs    302 out of 1681
Neff          7.9 
Searched_HMMs 13730
Date          Mon Mar 25 18:06:19 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010019.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010019hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 1.7E-29 1.2E-33  267.9  39.2  345  124-498    78-428 (503)
  2 d1q1sc_ a.118.1.1 (C:) Importi 100.0 1.3E-29 9.8E-34  261.8  36.4  363  121-513    12-384 (434)
  3 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0 2.5E-30 1.8E-34  275.9  28.2  367  122-519    17-389 (529)
  4 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0 1.7E-27 1.3E-31  253.6  31.7  343  123-498    60-408 (529)
  5 d1q1sc_ a.118.1.1 (C:) Importi  99.9 1.4E-24   1E-28  223.7  35.0  347  124-500    58-417 (434)
  6 d1wa5b_ a.118.1.1 (B:) Karyoph  99.9 6.9E-24   5E-28  224.3  35.0  321  172-514    75-400 (503)
  7 d1xm9a1 a.118.1.24 (A:244-700)  99.9 1.1E-24 7.7E-29  221.8  26.8  361  124-516     4-450 (457)
  8 d1xm9a1 a.118.1.24 (A:244-700)  99.9 1.8E-21 1.3E-25  197.6  25.9  324  173-517     2-408 (457)
  9 d1xqra1 a.118.1.21 (A:87-350)   99.8 3.8E-19 2.7E-23  172.7  18.5  204  275-495    31-238 (264)
 10 d1xqra1 a.118.1.21 (A:87-350)   99.8 3.1E-18 2.3E-22  166.1  22.4  196  232-443    30-228 (264)
 11 d1ho8a_ a.118.1.9 (A:) Regulat  98.4 2.2E-05 1.6E-09   79.4  24.1  319  174-511    75-466 (477)
 12 d1b3ua_ a.118.1.2 (A:) Constan  98.3 5.5E-05   4E-09   78.7  26.4  297  124-474    12-310 (588)
 13 d1b3ua_ a.118.1.2 (A:) Constan  98.3 3.8E-05 2.7E-09   80.0  23.7  303  172-515   280-587 (588)
 14 d2vglb_ a.118.1.10 (B:) Adapti  98.3 1.1E-05 7.8E-10   85.2  18.6  267  175-479   120-421 (579)
 15 d1oyza_ a.118.1.16 (A:) Hypoth  98.2 0.00014   1E-08   67.4  23.2  253  124-469    21-273 (276)
 16 d2vglb_ a.118.1.10 (B:) Adapti  98.2 6.6E-05 4.8E-09   79.0  22.2  307  124-474   120-454 (579)
 17 d1qbkb_ a.118.1.1 (B:) Karyoph  98.1 0.00013 9.6E-09   80.0  23.3  156  328-492   637-796 (888)
 18 d1qbkb_ a.118.1.1 (B:) Karyoph  98.0 6.8E-05   5E-09   82.4  19.3  318  174-514   392-777 (888)
 19 d1oyza_ a.118.1.16 (A:) Hypoth  98.0 0.00032 2.4E-08   64.7  21.1  220  218-500    20-261 (276)
 20 d2vgla_ a.118.1.10 (A:) Adapti  98.0  0.0082 5.9E-07   62.4  33.5  299  123-475   104-426 (584)
 21 d1u6gc_ a.118.1.2 (C:) Cullin-  97.7 5.7E-05 4.2E-09   85.3  11.2  349  125-513     6-398 (1207)
 22 d1ibrb_ a.118.1.1 (B:) Importi  97.6  0.0023 1.7E-07   62.6  21.0  285  124-430   129-436 (458)
 23 d1ho8a_ a.118.1.9 (A:) Regulat  97.6   0.008 5.8E-07   60.2  24.7  231  230-475   176-474 (477)
 24 d1qgra_ a.118.1.1 (A:) Importi  97.5   0.017 1.3E-06   61.2  27.4  326  123-474   129-479 (876)
 25 d2bpta1 a.118.1.1 (A:1-861) Im  97.3    0.04 2.9E-06   57.9  27.9  371   63-474    87-482 (861)
 26 d2vgla_ a.118.1.10 (A:) Adapti  97.3   0.012 8.9E-07   61.0  23.0  273  175-484   105-398 (584)
 27 d1ibrb_ a.118.1.1 (B:) Importi  97.1   0.013 9.3E-07   57.0  19.0  257  188-473    12-286 (458)
 28 d2bpta1 a.118.1.1 (A:1-861) Im  96.7   0.033 2.4E-06   58.6  20.1  257  189-474    18-295 (861)
 29 d1qgra_ a.118.1.1 (A:) Importi  96.5   0.064 4.6E-06   56.6  20.4  264  179-474     4-288 (876)
 30 d1te4a_ a.118.1.16 (A:) MTH187  96.1  0.0036 2.7E-07   49.8   5.9   88  354-470    22-109 (111)
 31 d1te4a_ a.118.1.16 (A:) MTH187  95.9  0.0064 4.7E-07   48.3   6.2   88  312-426    22-109 (111)
 32 d1u6gc_ a.118.1.2 (C:) Cullin-  95.1   0.096   7E-06   57.9  14.9  282  175-483   433-727 (1207)
 33 d2bnxa1 a.118.1.23 (A:133-475)  93.0     1.6 0.00012   41.3  16.9  149  345-498    37-212 (343)
 34 d2bnxa1 a.118.1.23 (A:133-475)  89.3     2.6 0.00019   39.7  14.1  150  215-366    43-212 (343)
 35 d1lsha1 a.118.4.1 (A:285-620)   87.6     3.1 0.00023   39.0  13.3  136  314-471   125-272 (336)
 36 d1upka_ a.118.1.15 (A:) Mo25 p  71.5      38  0.0027   31.0  20.4  170  305-485    62-239 (330)
 37 d1upka_ a.118.1.15 (A:) Mo25 p  70.5      40  0.0029   30.8  19.3  223  169-411    65-300 (330)
 38 d1t1ha_ g.44.1.2 (A:) E3 ubiqu  68.9     0.6 4.3E-05   34.0   0.6   25   77-101    53-78  (78)
 39 d1lrva_ a.118.1.5 (A:) Leucine  52.8     3.1 0.00022   36.9   2.5  146  261-422    66-230 (233)
 40 d1lrva_ a.118.1.5 (A:) Leucine  47.4     3.2 0.00023   36.8   1.6   33  390-424   153-185 (233)
 41 d2c2la2 g.44.1.2 (A:225-304) S  43.7     2.2 0.00016   30.9  -0.1   26   74-99     49-75  (80)
 42 d1wa5c_ a.118.1.1 (C:) Exporti  43.5      73  0.0053   32.4  12.4  131  264-429     5-151 (959)
 43 d2bj7a1 a.43.1.3 (A:1-50) Nick  41.6      13 0.00095   24.3   3.6   26   67-95     16-41  (50)
 44 d2hzaa1 a.43.1.3 (A:1-48) Nick  38.6      16  0.0012   23.6   3.6   26   67-95     14-39  (48)
 45 d1wa5c_ a.118.1.1 (C:) Exporti  36.3      48  0.0035   33.9   9.4  135  314-473     4-151 (959)
 46 d1nh2d1 a.32.1.1 (D:5-54) Smal  25.8      15  0.0011   23.8   1.8   23   54-78     27-49  (50)
 47 d1lsha1 a.118.4.1 (A:285-620)   25.0 2.2E+02   0.016   25.2  23.0  127  326-480   185-315 (336)
 48 d1t06a_ a.118.1.17 (A:) Hypoth  23.2      60  0.0043   27.9   6.1  100  371-485    91-191 (235)
 49 d1ujka_ a.118.9.2 (A:) ADP-rib  23.0 1.5E+02   0.011   23.1   8.1   75  120-202    43-120 (145)
 50 d1ujka_ a.118.9.2 (A:) ADP-rib  21.3      94  0.0068   24.4   6.5   61  370-430    57-123 (145)
 51 d1dvpa1 a.118.9.2 (A:1-145) Hr  20.5   1E+02  0.0076   24.0   6.7   74  120-203    40-113 (145)

No 1  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.97  E-value=1.7e-29  Score=267.87  Aligned_cols=345  Identities=13%  Similarity=0.147  Sum_probs=292.4

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      +..+...+.+       +|.+.+.+++..+|++.+. +..++...+.++|++|.|+.+|++.  .+..++..|+++|+++
T Consensus        78 l~~~~~~~~s-------~~~~~~~~a~~~~r~~ls~-~~~~~i~~ii~~g~i~~Lv~~l~~~--~~~~iq~~a~~~L~ni  147 (503)
T d1wa5b_          78 LPQMTQQLNS-------DDMQEQLSATVKFRQILSR-EHRPPIDVVIQAGVVPRLVEFMREN--QPEMLQLEAAWALTNI  147 (503)
T ss_dssp             HHHHHHHHSC-------SSHHHHHHHHHHHHHHTCC-SSSCSHHHHHHTTCHHHHHHTTSTT--SCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcC-------CCHHHHHHHHHHHHHHHhc-CCCchHHHHHHCCChHHHHHHHcCC--CCHHHHHHHHHHHHHH
Confidence            6677777776       7888999999999998865 3555678899999999999999864  3667777788888887


Q ss_pred             hccc-ccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHH
Q 010019          204 VHDV-QSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLY  282 (520)
Q Consensus       204 ~~~~-~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~  282 (520)
                      +.+. ..+..+...|+++.++.+|.+  ++.+++..++|+|++++..++.+|..+++.|+++.|+.++.....+++++++
T Consensus       148 ~~~~~~~~~~~~~~g~i~~l~~lL~s--~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~  225 (503)
T d1wa5b_         148 ASGTSAQTKVVVDADAVPLFIQLLYT--GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTAT  225 (503)
T ss_dssp             TTSCHHHHHHHHHTTCHHHHHHHHHH--CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHH
T ss_pred             HcCCHHHHHHHHhCCChHHHHHHhcC--CChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhcccCCHHHHHHHH
Confidence            7543 235667788999999999984  5689999999999999998899999999999999999999987778999999


Q ss_pred             HHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhcc-ChhhHHHHHhcCChHHHHH
Q 010019          283 DAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAV-NDEICKSVAENGGIDALLR  361 (520)
Q Consensus       283 ~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~-~~e~~~~i~~~Ggv~~Ll~  361 (520)
                      |+|.+|+..+++...         .....+++|.|+.++.. .|.+++.++||+|++|+. +++....+.+.|+++.++.
T Consensus       226 ~~l~nl~~~~~~~~~---------~~~~~~~l~~l~~~l~~-~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~  295 (503)
T d1wa5b_         226 WTLSNLCRGKKPQPD---------WSVVSQALPTLAKLIYS-MDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVE  295 (503)
T ss_dssp             HHHHHHHCCSSSCCC---------HHHHGGGHHHHHHHTTC-CCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHhcCCccchH---------HHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhh
Confidence            999999987665442         22346889999999975 467889999999999994 5666788999999999999


Q ss_pred             HHhccCCCCcHHHHHHHHHHHHHhhCC-CchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 010019          362 CIDDSGLQGNKTVARICCSLLSKLAGS-DSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM  440 (520)
Q Consensus       362 lL~~~~~~~~~~v~~~al~aL~~La~~-~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~  440 (520)
                      ++...    +..+...++.+|++++.+ +.....+.+.|+++.+..++.  +.++.+++.++|+|+|++..+++....++
T Consensus       296 ll~~~----~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~--~~~~~i~~~~~~~l~nl~~~~~~~~~~i~  369 (503)
T d1wa5b_         296 LLSHE----STLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLS--SPKENIKKEACWTISNITAGNTEQIQAVI  369 (503)
T ss_dssp             GGGCS----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT--CSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred             cccCC----chhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHhc--CCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence            99852    358999999999999855 455667889999999999998  67899999999999999999999999999


Q ss_pred             hcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhh---ChhhHHHHHhCCHHHHHHHHHHh
Q 010019          441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVAR---NPENRKLLLSNGVEKLIRQAKEN  498 (520)
Q Consensus       441 ~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~---~~e~~~~l~~~G~~~lL~~~~~~  498 (520)
                      +.|+++.+++.|..  .+..++++|+|+|.|++..   .++....+++.|+.+.|...+..
T Consensus       370 ~~~~l~~li~~l~~--~~~~v~~~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~~L~~  428 (503)
T d1wa5b_         370 DANLIPPLVKLLEV--AEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEI  428 (503)
T ss_dssp             HTTCHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTT
T ss_pred             HccccchhHHhccc--CChhHHHHHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHHHhcC
Confidence            99999999999976  5789999999999999864   35678889999998888777643


No 2  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.97  E-value=1.3e-29  Score=261.75  Aligned_cols=363  Identities=12%  Similarity=0.136  Sum_probs=298.8

Q ss_pred             HHHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHH
Q 010019          121 IQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTM  200 (520)
Q Consensus       121 ~~~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~L  200 (520)
                      ..+++.|...+.+       +|++.+.+|+..|+++.+. +....+..+.+.|++|.|+++|++.  ++++++..|+++|
T Consensus        12 ~~~i~~lv~~l~s-------~~~~~~~~a~~~l~~l~s~-~~~~~~~~i~~~g~i~~Lv~lL~~~--~~~~v~~~a~~~L   81 (434)
T d1q1sc_          12 NWSVEDIVKGINS-------NNLESQLQATQAARKLLSR-EKQPPIDNIIRAGLIPKFVSFLGKT--DCSPIQFESAWAL   81 (434)
T ss_dssp             SCCHHHHHHHHTS-------SCHHHHHHHHHHHHHHHHS-SSCCCHHHHHHTTCHHHHHHHTTCG--GGHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHcC-------CCHHHHHHHHHHHHHHhcC-CCCchHHHHHHCCCHHHHHHHHccC--CCHHHHHHHHHHH
Confidence            3468888888888       8999999999999998764 1333467789999999999999765  3567777778888


Q ss_pred             HHhhccc-ccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCCh----
Q 010019          201 ALLVHDV-QSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRN----  275 (520)
Q Consensus       201 a~l~~~~-~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~----  275 (520)
                      +.++.+. +.+..+++.|+++.++.+|.  +++.+++..++++|.++|..++..|..+.+.|+++.|+.++..+..    
T Consensus        82 ~~la~~~~~~~~~i~~~~~i~~l~~~L~--~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~  159 (434)
T d1q1sc_          82 TNIASGTSEQTKAVVDGGAIPAFISLLA--SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLA  159 (434)
T ss_dssp             HHHHTSCHHHHHHHHHTTHHHHHHHHTT--CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSC
T ss_pred             HHHhcCChhhhhHhhhccchhhhhhccc--cCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccch
Confidence            7776543 34677889999999999997  4578999999999999999888899999999999999999987643    


Q ss_pred             -HHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhcc-ChhhHHHHHhc
Q 010019          276 -DSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAV-NDEICKSVAEN  353 (520)
Q Consensus       276 -~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~-~~e~~~~i~~~  353 (520)
                       ..++.+++++.+++........         .....++++.|+.++.. .++++..+++++|.+|+. +++....+.+.
T Consensus       160 ~~~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~l~~l~~ll~~-~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~  229 (434)
T d1q1sc_         160 CGYLRNLTWTLSNLCRNKNPAPP---------LDAVEQILPTLVRLLHH-NDPEVLADSCWAISYLTDGPNERIEMVVKK  229 (434)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTCCC---------HHHHHHHHHHHHHHTTC-SCHHHHHHHHHHHHHHTSSCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhcccccch---------hhhhhhHHHHHHHHHhc-cccchhhhHHhhhcccchhhhhhHHHHhhc
Confidence             5667889999999987654331         22345678999998875 467889999999999995 45677788899


Q ss_pred             CChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhC-CCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCC
Q 010019          354 GGIDALLRCIDDSGLQGNKTVARICCSLLSKLAG-SDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRS  432 (520)
Q Consensus       354 Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~-~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~  432 (520)
                      |+++.++.++...    +..++..++.+|++++. +++.+..+++.|+++.++.+|+  +.++.+++.++++|.+|+..+
T Consensus       230 ~~~~~Lv~ll~~~----~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~~v~~~a~~~L~~l~~~~  303 (434)
T d1q1sc_         230 GVVPQLVKLLGAT----ELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLT--NPKTNIQKEATWTMSNITAGR  303 (434)
T ss_dssp             TCHHHHHHHHTCS----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTT--CSSHHHHHHHHHHHHHHTTSC
T ss_pred             ccchhcccccccc----hhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhc--ccchhhhHHHHHHHhhhcccc
Confidence            9999999998752    35899999999999985 4567788899999999999998  678999999999999999988


Q ss_pred             HHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhh-ChhhHHHHHhCCHHHHHHHHHHhC-cchHHHHHHHH
Q 010019          433 PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVAR-NPENRKLLLSNGVEKLIRQAKENH-EICKDAATDAL  510 (520)
Q Consensus       433 ~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~-~~e~~~~l~~~G~~~lL~~~~~~h-~~~~~~a~aAL  510 (520)
                      ++....+.+.|+++.++..+..  .++.+++.|+|+|.|++.. +++....+++.|+.+.|..++... +.....+..+|
T Consensus       304 ~~~~~~i~~~~~i~~li~~l~~--~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l  381 (434)
T d1q1sc_         304 QDQIQQVVNHGLVPFLVGVLSK--ADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAI  381 (434)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHS--SCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             chhHHHHhhhhhHHHHHHHHhc--cChHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHH
Confidence            8999999999999999999965  5789999999999999864 678889999999988888776543 34445555565


Q ss_pred             HHc
Q 010019          511 RDL  513 (520)
Q Consensus       511 r~L  513 (520)
                      .+|
T Consensus       382 ~~l  384 (434)
T d1q1sc_         382 SNI  384 (434)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544


No 3  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=2.5e-30  Score=275.85  Aligned_cols=367  Identities=16%  Similarity=0.149  Sum_probs=306.6

Q ss_pred             HHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHh-cCcHHHHHHHHhhcccCcHHHHHHHHHHH
Q 010019          122 QSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATK-NGGVELVCSICYKMRCGSKRVLDSCLKTM  200 (520)
Q Consensus       122 ~~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~-~Gaip~Lv~lL~~~~~~~~~~~~~al~~L  200 (520)
                      .++..|.+.+.+       .|.+.+..|+..|.++++   ....|..+++ .|++|.|+.+|++.  ++.+++..|..+|
T Consensus        17 ~aip~L~~lL~~-------~~~~v~~~A~~~l~~l~~---~~~~~~~~~~~~~~v~~l~~~L~~~--~~~~~~~~a~~~L   84 (529)
T d1jdha_          17 RAIPELTKLLND-------EDQVVVNKAAVMVHQLSK---KEASRHAIMRSPQMVSAIVRTMQNT--NDVETARCTAGTL   84 (529)
T ss_dssp             CHHHHHHHHHTC-------SCHHHHHHHHHHHHHHHT---SHHHHHHHHTCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC-------CCHHHHHHHHHHHHHHHh---ccHHHHHHHHhhhHHHHHHHHHcCC--CCHHHHHHHHHHH
Confidence            468888888876       788899999999999997   4555555555 57899999999875  3677888889999


Q ss_pred             HHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHH
Q 010019          201 ALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQS  280 (520)
Q Consensus       201 a~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~  280 (520)
                      ..++.+.+.+..+++.||++.|+++|+  +++++++..++++|.++|..++..|..+.+.|++++|+.+|++.+.+++..
T Consensus        85 ~~l~~~~~~~~~i~~~g~i~~Li~lL~--~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~~~~~  162 (529)
T d1jdha_          85 HNLSHHREGLLAIFKSGGIPALVKMLG--SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAI  162 (529)
T ss_dssp             HHHTTSHHHHHHHHHTTHHHHHHHHTT--CSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHH
T ss_pred             HHHhCCchhHHHHHHCCCHHHHHHHhC--CCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccChHHHHH
Confidence            999877777888999999999999997  467899999999999999988889999999999999999999877789999


Q ss_pred             HHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHH
Q 010019          281 LYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALL  360 (520)
Q Consensus       281 a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll  360 (520)
                      ++++|.+|+..++..         ...+.+.|++++|+.+|+.+++..++..++++|++++.+++++..+++.|+++.|+
T Consensus       163 a~~~L~~l~~~~~~~---------~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~g~~~~L~  233 (529)
T d1jdha_         163 TTDCLQILAYGNQES---------KLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALG  233 (529)
T ss_dssp             HHHHHHHHHTTCHHH---------HHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHH
T ss_pred             HHHHHHHHhhhhhHH---------HHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhccccccchhhhhhhhhhHH
Confidence            999999999765432         23566889999999999987667788899999999999999999999999999999


Q ss_pred             HHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 010019          361 RCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM  440 (520)
Q Consensus       361 ~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~  440 (520)
                      .++...    +.+++..++++|++++.....+  +...|+++.|++++.  ++++.+++.++++|++|+..+++++..+.
T Consensus       234 ~ll~~~----~~~~~~~a~~~l~~ls~~~~~~--~~~~~~i~~Lv~ll~--~~~~~~~~~a~~~L~~l~~~~~~~~~~i~  305 (529)
T d1jdha_         234 LHLTDP----SQRLVQNCLWTLRNLSDAATKQ--EGMEGLLGTLVQLLG--SDDINVVTCAAGILSNLTCNNYKNKMMVC  305 (529)
T ss_dssp             TTTTSS----CHHHHHHHHHHHHHHHTTCTTC--SCCHHHHHHHHHHTT--CSCHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred             HHhccc----chhhhhhhhhHHHhccccccch--hhhhhcchhhhhhcc--cccHHHHHHHHHHHHhhccchhHHHHHHH
Confidence            998753    3589999999999998554332  334578999999998  77899999999999999999999999999


Q ss_pred             hcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhCh---hhHHHHHhCCHHHHHHHHHHhCc--chHHHHHHHHHHcCC
Q 010019          441 EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNP---ENRKLLLSNGVEKLIRQAKENHE--ICKDAATDALRDLGL  515 (520)
Q Consensus       441 ~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~---e~~~~l~~~G~~~lL~~~~~~h~--~~~~~a~aALr~Lg~  515 (520)
                      +.|+++.++.++...++.+.++..|+++|+|++...+   ..+..+...|..+.|..++....  .....+..+|++|..
T Consensus       306 ~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~~~~l~~l~~  385 (529)
T d1jdha_         306 QVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL  385 (529)
T ss_dssp             HTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTT
T ss_pred             HhhhHHHHHHHHHhhhcchhHHHHHHHHhhcccchhhcchhhhhhHHhcccchhHHHHHhccchHHHHHHHHHHHhhcch
Confidence            9999999999998777889999999999999975533   34556667777777777664432  234567788999987


Q ss_pred             CCCC
Q 010019          516 DDYN  519 (520)
Q Consensus       516 ~~~n  519 (520)
                      +..|
T Consensus       386 ~~~~  389 (529)
T d1jdha_         386 CPAN  389 (529)
T ss_dssp             SGGG
T ss_pred             hhhh
Confidence            6543


No 4  
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.7e-27  Score=253.63  Aligned_cols=343  Identities=17%  Similarity=0.182  Sum_probs=287.3

Q ss_pred             HHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHH
Q 010019          123 SLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMAL  202 (520)
Q Consensus       123 ~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~  202 (520)
                      .+..|...+.+.      ++.+....++..|..+|.   +++++..+++.|++|.|+.+|++.   +++++..|+++|++
T Consensus        60 ~v~~l~~~L~~~------~~~~~~~~a~~~L~~l~~---~~~~~~~i~~~g~i~~Li~lL~~~---~~~v~~~a~~aL~~  127 (529)
T d1jdha_          60 MVSAIVRTMQNT------NDVETARCTAGTLHNLSH---HREGLLAIFKSGGIPALVKMLGSP---VDSVLFYAITTLHN  127 (529)
T ss_dssp             HHHHHHHHHHHC------CCHHHHHHHHHHHHHHTT---SHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC------CCHHHHHHHHHHHHHHhC---CchhHHHHHHCCCHHHHHHHhCCC---CHHHHHHHHHHHHH
Confidence            466666666542      456777889999999987   788999999999999999999874   78899999999998


Q ss_pred             hhccccc-chhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCCh-HHHHH
Q 010019          203 LVHDVQS-TETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRN-DSIQS  280 (520)
Q Consensus       203 l~~~~~~-~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~-~~~~~  280 (520)
                      ++.+.+. +..+.+.|+++.|+++|+  +++.+++..+++++.+++..++.++..+.+.|+++.|+.+|+.+.. .++..
T Consensus       128 l~~~~~~~~~~~~~~g~i~~Lv~lL~--~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~  205 (529)
T d1jdha_         128 LLLHQEGAKMAVRLAGGLQKMVALLN--KTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWT  205 (529)
T ss_dssp             HHHHCTTHHHHHHHHTHHHHHHHGGG--CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHH
T ss_pred             hhcccchhhhHHHhcCCchHHHHHHH--ccChHHHHHHHHHHHHHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHH
Confidence            8766543 567789999999999997  4578999999999999998888889999999999999999988754 77788


Q ss_pred             HHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHH
Q 010019          281 LYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALL  360 (520)
Q Consensus       281 a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll  360 (520)
                      +++++.+|+.+++++.          .+.+.|++++|+.++... +..++..++++|++++....  ......|+++.|+
T Consensus       206 ~~~~l~~ls~~~~~~~----------~~~~~g~~~~L~~ll~~~-~~~~~~~a~~~l~~ls~~~~--~~~~~~~~i~~Lv  272 (529)
T d1jdha_         206 TSRVLKVLSVCSSNKP----------AIVEAGGMQALGLHLTDP-SQRLVQNCLWTLRNLSDAAT--KQEGMEGLLGTLV  272 (529)
T ss_dssp             HHHHHHHHTTSTTHHH----------HHHHTTHHHHHHTTTTSS-CHHHHHHHHHHHHHHHTTCT--TCSCCHHHHHHHH
T ss_pred             HHHHHhhhhccccccc----------hhhhhhhhhhHHHHhccc-chhhhhhhhhHHHhcccccc--chhhhhhcchhhh
Confidence            9999999998876654          688899999999999864 56788999999999974332  2344568899999


Q ss_pred             HHHhccCCCCcHHHHHHHHHHHHHhh-CCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHH---HH
Q 010019          361 RCIDDSGLQGNKTVARICCSLLSKLA-GSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPE---NA  436 (520)
Q Consensus       361 ~lL~~~~~~~~~~v~~~al~aL~~La-~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~---~~  436 (520)
                      +++...    +..++..++++|++|+ .+++++..+.+.|+++.++.++...++.+.+++.++++|++|+.+.+.   ..
T Consensus       273 ~ll~~~----~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~~l~~~~~~~~~~~  348 (529)
T d1jdha_         273 QLLGSD----DINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQ  348 (529)
T ss_dssp             HHTTCS----CHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHH
T ss_pred             hhcccc----cHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHHHHhhhcchhHHHHHHHHhhcccchhhcchhhh
Confidence            998752    3589999999999998 467888899999999999999987778899999999999999975432   45


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHHHh
Q 010019          437 ARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAKEN  498 (520)
Q Consensus       437 ~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~~~  498 (520)
                      ..+...|+++.++.++.. +++..+++.++++|+|++ .+++++..+.+.|+.+.|..++..
T Consensus       349 ~~i~~~~~l~~L~~ll~~-~~~~~~~~~~~~~l~~l~-~~~~~~~~l~~~g~i~~L~~lL~~  408 (529)
T d1jdha_         349 NAVRLHYGLPVVVKLLHP-PSHWPLIKATVGLIRNLA-LCPANHAPLREQGAIPRLVQLLVR  408 (529)
T ss_dssp             HHHHHTTCHHHHHHTTST-TCCHHHHHHHHHHHHHHT-TSGGGHHHHHHTTHHHHHHHHHHH
T ss_pred             hhHHhcccchhHHHHHhc-cchHHHHHHHHHHHhhcc-hhhhhhhhhhhcccHHHHHHHHhc
Confidence            567789999999999865 466778899999999994 578999999999998888887754


No 5  
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.94  E-value=1.4e-24  Score=223.70  Aligned_cols=347  Identities=13%  Similarity=0.121  Sum_probs=281.1

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      +..|...+.+.      .+.+.+..++..|..+|+.  ++..+..+.+.|++|.|+.+|++.   +.+++..|+++|+++
T Consensus        58 i~~Lv~lL~~~------~~~~v~~~a~~~L~~la~~--~~~~~~~i~~~~~i~~l~~~L~~~---~~~~~~~a~~~L~nl  126 (434)
T d1q1sc_          58 IPKFVSFLGKT------DCSPIQFESAWALTNIASG--TSEQTKAVVDGGAIPAFISLLASP---HAHISEQAVWALGNI  126 (434)
T ss_dssp             HHHHHHHTTCG------GGHHHHHHHHHHHHHHHTS--CHHHHHHHHHTTHHHHHHHHTTCS---CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccC------CCHHHHHHHHHHHHHHhcC--ChhhhhHhhhccchhhhhhccccC---CHHHHHHHHHHHHHH
Confidence            56777777541      4566778899999999986  788899999999999999999874   778888899999988


Q ss_pred             hcccc-cchhHHhcCCcHHHHHHHhcCCC---ChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHH
Q 010019          204 VHDVQ-STETFRTGGGPKLLVNILIDGNE---DPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQ  279 (520)
Q Consensus       204 ~~~~~-~~~~i~~~ggi~~Lv~lL~~~~~---~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~  279 (520)
                      +.+++ .+..+...|+++.++.+|..+..   .......+++.+.+++.............++++.|+.++.+.+.+++.
T Consensus       127 ~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~  206 (434)
T d1q1sc_         127 AGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLA  206 (434)
T ss_dssp             HTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHH
T ss_pred             hccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhccccchhh
Confidence            86553 35667788999999999976543   235566778889888876554555555668899999999887779999


Q ss_pred             HHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhcc-ChhhHHHHHhcCChHH
Q 010019          280 SLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAV-NDEICKSVAENGGIDA  358 (520)
Q Consensus       280 ~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~-~~e~~~~i~~~Ggv~~  358 (520)
                      .++++|.+|+..++...         ..+.+.|+++.|+.+++. .+..++..++.+|.+++. +++.+..+.+.|+++.
T Consensus       207 ~a~~~l~~l~~~~~~~~---------~~~~~~~~~~~Lv~ll~~-~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~  276 (434)
T d1q1sc_         207 DSCWAISYLTDGPNERI---------EMVVKKGVVPQLVKLLGA-TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAV  276 (434)
T ss_dssp             HHHHHHHHHTSSCHHHH---------HHHHTTTCHHHHHHHHTC-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGG
T ss_pred             hHHhhhcccchhhhhhH---------HHHhhcccchhccccccc-chhhhhhchhhhhhhHHhhhhHHHHHHHhccccch
Confidence            99999999997654322         345578999999999986 467889999999999985 5677889999999999


Q ss_pred             HHHHHhccCCCCcHHHHHHHHHHHHHhhC-CCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcC-CHHHH
Q 010019          359 LLRCIDDSGLQGNKTVARICCSLLSKLAG-SDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLR-SPENA  436 (520)
Q Consensus       359 Ll~lL~~~~~~~~~~v~~~al~aL~~La~-~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~-~~~~~  436 (520)
                      ++.+|+..    +.+++..++++|.+|+. +++.+..+.+.|+++.++.++.  ..++.++..++++|.+++.. +++..
T Consensus       277 l~~ll~~~----~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~--~~~~~v~~~a~~~l~nl~~~~~~~~~  350 (434)
T d1q1sc_         277 FPSLLTNP----KTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLS--KADFKTQKEAAWAITNYTSGGTVEQI  350 (434)
T ss_dssp             HHHHTTCS----SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHH--SSCHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred             HHHhhccc----chhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHh--ccChHHHHHHHHHHHHHHhcCCHHHH
Confidence            99999853    34899999999999985 4566778899999999999998  67899999999999999864 56788


Q ss_pred             HHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh------hChhhHHHHHhCCHHHHHHHHHHhCc
Q 010019          437 ARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA------RNPENRKLLLSNGVEKLIRQAKENHE  500 (520)
Q Consensus       437 ~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~------~~~e~~~~l~~~G~~~lL~~~~~~h~  500 (520)
                      ..+.+.|+++.++.++..  ++++++..+.++|.++..      .++..+..+.+.|+.+.|..+ ..|+
T Consensus       351 ~~l~~~~~i~~L~~ll~~--~d~~~~~~~l~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~L-~~~~  417 (434)
T d1q1sc_         351 VYLVHCGIIEPLMNLLSA--KDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL-QRHE  417 (434)
T ss_dssp             HHHHHTTCHHHHHHHTTS--SCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHHH-HTCS
T ss_pred             HHHHHCCcHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHcCCHHHHHHH-HcCC
Confidence            889999999999999954  689999999999999852      123356677788888888664 5664


No 6  
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.93  E-value=6.9e-24  Score=224.28  Aligned_cols=321  Identities=11%  Similarity=0.093  Sum_probs=267.3

Q ss_pred             cCcHHHHHHHHhhcccCcHHHHHHHHHHHHHhhccc--ccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcC
Q 010019          172 NGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDV--QSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATG  249 (520)
Q Consensus       172 ~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~--~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~  249 (520)
                      ...++.++..+.+.   +...+..++..+..++...  +....++++|++|.|+.+|+. ..+.+++..++|+|.++|..
T Consensus        75 ~~~l~~~~~~~~s~---~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~-~~~~~iq~~a~~~L~ni~~~  150 (503)
T d1wa5b_          75 QQELPQMTQQLNSD---DMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRE-NQPEMLQLEAAWALTNIASG  150 (503)
T ss_dssp             -CCHHHHHHHHSCS---SHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTST-TSCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHcC
Confidence            45688888888764   6677777888887766332  334578899999999999975 35688999999999999988


Q ss_pred             ChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhH
Q 010019          250 NEVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPS  329 (520)
Q Consensus       250 ~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~  329 (520)
                      .+.....+.+.|+++.++.+|.+...+++..++|+|++|+.++.         ++...+.+.|++++|+.++... +..+
T Consensus       151 ~~~~~~~~~~~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~---------~~r~~l~~~~~~~~L~~ll~~~-~~~~  220 (503)
T d1wa5b_         151 TSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDST---------DYRDYVLQCNAMEPILGLFNSN-KPSL  220 (503)
T ss_dssp             CHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCH---------HHHHHHHHTTCHHHHHHGGGSC-CHHH
T ss_pred             CHHHHHHHHhCCChHHHHHHhcCCChhHHHHHHHHHHHHhhhhH---------HHHHHHHhhcccccchhhcccC-CHHH
Confidence            88888889999999999999998877999999999999997642         2234667899999999999864 5678


Q ss_pred             HHHHHHHHHHhccCh-hhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCC-CchHHHHHhcCCHHHHHHH
Q 010019          330 LISASIALKAVAVND-EICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGS-DSNKSAIIENGGMDKLIVV  407 (520)
Q Consensus       330 ~~~a~~aL~~La~~~-e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~-~~~k~~Iv~~g~l~~Lv~l  407 (520)
                      +..++|+|++|+.+. .........|+++.++.++..    .+.+++..++++|.+|+.. ++....+++.|+++.++.+
T Consensus       221 ~~~~~~~l~nl~~~~~~~~~~~~~~~~l~~l~~~l~~----~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~l  296 (503)
T d1wa5b_         221 IRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYS----MDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVEL  296 (503)
T ss_dssp             HHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTC----CCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHG
T ss_pred             HHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHhcc----ccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhc
Confidence            899999999999544 334444567889999998875    2358999999999999965 4556778999999999999


Q ss_pred             HhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCC
Q 010019          408 SARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNG  487 (520)
Q Consensus       408 L~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G  487 (520)
                      +.  ++++.++..++.+|.+|+..+++....+.+.|+++.+..++..  .++.+++.++|+|.|++..+++....+++.|
T Consensus       297 l~--~~~~~v~~~al~~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~--~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~  372 (503)
T d1wa5b_         297 LS--HESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSS--PKENIKKEACWTISNITAGNTEQIQAVIDAN  372 (503)
T ss_dssp             GG--CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred             cc--CCchhhhhhHHHHHHHHHHHHHHHHHhhhccchHHHHHHHhcC--CCHHHHHHHHHHHHHHhhccHHHHHHHHHcc
Confidence            98  6789999999999999999898899999999999999988853  5788999999999999988999999999999


Q ss_pred             HHHHHHHHHHhC-cchHHHHHHHHHHcC
Q 010019          488 VEKLIRQAKENH-EICKDAATDALRDLG  514 (520)
Q Consensus       488 ~~~lL~~~~~~h-~~~~~~a~aALr~Lg  514 (520)
                      +.+.+...+... ...+..|..||.++.
T Consensus       373 ~l~~li~~l~~~~~~v~~~a~~~l~nl~  400 (503)
T d1wa5b_         373 LIPPLVKLLEVAEYKTKKEACWAISNAS  400 (503)
T ss_dssp             CHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             ccchhHHhcccCChhHHHHHHHHHHHHH
Confidence            988887777554 467888888888875


No 7  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.93  E-value=1.1e-24  Score=221.85  Aligned_cols=361  Identities=14%  Similarity=0.150  Sum_probs=272.3

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      |..|...+.+       +|++.+..++..|.++|..  ++.+|..+.+.|+||+|+++|++.   +.+++..|+.+|..+
T Consensus         4 ip~lv~~L~~-------~~~~~~~~a~~~l~~l~~~--~~~~~~~i~~~g~i~~Lv~lL~~~---~~~v~~~a~~aL~~L   71 (457)
T d1xm9a1           4 IPKAVQYLSS-------QDEKYQAIGAYYIQHTCFQ--DESAKQQVYQLGGICKLVDLLRSP---NQNVQQAAAGALRNL   71 (457)
T ss_dssp             HHHHHHHHHS-------SCTHHHHHHHHHHHHHTSS--CSSHHHHHHHTTHHHHHHHHTTSS---CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCC-------CCHHHHHHHHHHHHHHHcC--CHHHHHHHHHCCcHHHHHHHHCCC---CHHHHHHHHHHHHHH
Confidence            5567777777       7899999999999999986  899999999999999999999874   788998899999988


Q ss_pred             hccc-ccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHh-----------
Q 010019          204 VHDV-QSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILS-----------  271 (520)
Q Consensus       204 ~~~~-~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~-----------  271 (520)
                      +.++ +.+..+.+.||++.++.++.+ ..+.+++..+++++.+++.. +..+..+...|+ +.++..+.           
T Consensus        72 ~~~~~~~~~~i~~~g~v~~li~~l~~-~~~~~~~~~a~~~l~~l~~~-~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~  148 (457)
T d1xm9a1          72 VFRSTTNKLETRRQNGIREAVSLLRR-TGNAEIQKQLTGLLWNLSST-DELKEELIADAL-PVLADRVIIPFSGWCDGNS  148 (457)
T ss_dssp             HSSCHHHHHHHHHTTCHHHHHHHHTT-CCCHHHHHHHHHHHHHHHTS-SSTHHHHHHHHH-HHHHHHTTHHHHTCC----
T ss_pred             HcCCHHHHHHHHHCCChHHHHHHHhc-cCcHHHHHHHHHHHHHHHhh-hhhHHHHHhccc-HHHHHHHHhhhhhhhcchh
Confidence            7544 446788899999999999874 46788999999999999864 455666665544 44443331           


Q ss_pred             -----cCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHH-HcCCHHHHHHHHhcCC-----ChhHHHHHHHHH---
Q 010019          272 -----RQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFA-KIGIARALVHSLHAGL-----SSPSLISASIAL---  337 (520)
Q Consensus       272 -----~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~-~~g~l~~Lv~lL~~~~-----~~~~~~~a~~aL---  337 (520)
                           .....++..++++|.+++.+++++.          .+. ..|+++.|+.+++...     .......+...+   
T Consensus       149 ~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~----------~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~  218 (457)
T d1xm9a1         149 NMSREVVDPEVFFNATGCLRNLSSADAGRQ----------TMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL  218 (457)
T ss_dssp             -----CCCHHHHHHHHHHHHHHTTSHHHHH----------HHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHH
T ss_pred             hhhcccccHHHHHHHHHHHHHHhcCchHHH----------HHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhh
Confidence                 1123778889999999998765433          344 4577888888876421     111111111111   


Q ss_pred             ------------------------------------------------HHhccChhhHHHHHhcCChHHHHHHHhccCCC
Q 010019          338 ------------------------------------------------KAVAVNDEICKSVAENGGIDALLRCIDDSGLQ  369 (520)
Q Consensus       338 ------------------------------------------------~~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~  369 (520)
                                                                      ...+........+.+.++++.++.++....  
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~--  296 (457)
T d1xm9a1         219 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK--  296 (457)
T ss_dssp             TTTHHHHSCCHHHHHHHTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCC--
T ss_pred             hhhhHHHHHHHHHHHHhhhhhhhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhccc--
Confidence                                                            111122333444556677888888887642  


Q ss_pred             CcHHHHHHHHHHHHHhhCCCc------hHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcC
Q 010019          370 GNKTVARICCSLLSKLAGSDS------NKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAG  443 (520)
Q Consensus       370 ~~~~v~~~al~aL~~La~~~~------~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G  443 (520)
                       +..+...+++++.+++.+..      .+..+.+.|+++.|+.+|.  +.++.+++.++++|.+|+. +++++..+.+ +
T Consensus       297 -~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~~l~--~~~~~v~~~a~~~l~~La~-~~~~~~~i~~-~  371 (457)
T d1xm9a1         297 -KDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQ--SGNSDVVRSGASLLSNMSR-HPLLHRVMGN-Q  371 (457)
T ss_dssp             -CHHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTT--CSCHHHHHHHHHHHHHHHT-SGGGHHHHHH-H
T ss_pred             -chHHHHHHHHHHHHHhhccccchHHHHHHHHHHcCChHHHHhhhc--CccHHHHHHHHHHHHHHhh-ChhHHHHHHH-h
Confidence             24788999999999986543      3455678899999999998  7789999999999999995 7788777664 6


Q ss_pred             cHHHHHHHHHhCC----CCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHHHhCc--chHHHHHHHHHHcCCC
Q 010019          444 SGDLAIQAMLKFP----NAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAKENHE--ICKDAATDALRDLGLD  516 (520)
Q Consensus       444 ~i~~lv~~L~~~~----~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~~~h~--~~~~~a~aALr~Lg~~  516 (520)
                      +++.++.+|..+.    .+.+++..||++|+|++..+++++..+++.|+.+.|..++..+.  ..+..|..+|++|..+
T Consensus       372 ~i~~li~~L~~~~~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~g~i~~L~~l~~~~~~~~~~~aA~~~L~~L~~~  450 (457)
T d1xm9a1         372 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS  450 (457)
T ss_dssp             THHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSS
T ss_pred             hHHHHHHHHhccccCcCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHcC
Confidence            7888998886542    34679999999999999899999999999999888888887663  4678899999999654


No 8  
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88  E-value=1.8e-21  Score=197.58  Aligned_cols=324  Identities=11%  Similarity=0.110  Sum_probs=237.5

Q ss_pred             CcHHHHHHHHhhcccCcHHHHHHHHHHHHHhhccc-ccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCCh
Q 010019          173 GGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDV-QSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNE  251 (520)
Q Consensus       173 Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~-~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e  251 (520)
                      +.||.||++|+++   +++++..|.++|.+++.++ +.+..+++.||+|.|+++|+  +++++++..++++|.+++..++
T Consensus         2 ~~ip~lv~~L~~~---~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~--~~~~~v~~~a~~aL~~L~~~~~   76 (457)
T d1xm9a1           2 LTIPKAVQYLSSQ---DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR--SPNQNVQQAAAGALRNLVFRST   76 (457)
T ss_dssp             CCHHHHHHHHHSS---CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTT--SSCHHHHHHHHHHHHHHHSSCH
T ss_pred             CCHHHHHHHhCCC---CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHC--CCCHHHHHHHHHHHHHHHcCCH
Confidence            5799999999985   7899999999999998654 45899999999999999997  4679999999999999998899


Q ss_pred             hhHHHHHhcCCHHHHHHHHhcCCh-HHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHH---------
Q 010019          252 VVKESYMELKIDELILEILSRQRN-DSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSL---------  321 (520)
Q Consensus       252 ~nr~~i~~~g~i~~Lv~lL~~~~~-~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL---------  321 (520)
                      .+|..+.+.|+++.|+.++....+ +++..++++|.+|+..+..+.          .+.. .+++.++..+         
T Consensus        77 ~~~~~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~----------~~~~-~~~~~l~~~~~~~~~~~~~  145 (457)
T d1xm9a1          77 TNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE----------ELIA-DALPVLADRVIIPFSGWCD  145 (457)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHH----------HHHH-HHHHHHHHHTTHHHHTCC-
T ss_pred             HHHHHHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhHH----------HHHh-cccHHHHHHHHhhhhhhhc
Confidence            999999999999999999987644 778889999999998776543          2222 2344444443         


Q ss_pred             ------hcCCChhHHHHHHHHHHHhccChhhHHHHHh-cCChHHHHHHHhccCCC--CcHHHHHHHH-------------
Q 010019          322 ------HAGLSSPSLISASIALKAVAVNDEICKSVAE-NGGIDALLRCIDDSGLQ--GNKTVARICC-------------  379 (520)
Q Consensus       322 ------~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~-~Ggv~~Ll~lL~~~~~~--~~~~v~~~al-------------  379 (520)
                            ....+..++..++++|++++.+++++..+.. .|+++.++.++......  ........+.             
T Consensus       146 ~~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  225 (457)
T d1xm9a1         146 GNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAE  225 (457)
T ss_dssp             --------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHH
T ss_pred             chhhhhcccccHHHHHHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHH
Confidence                  2233567888999999999988888777665 45678898887532100  0000111111             


Q ss_pred             --------------------------------------HHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHH
Q 010019          380 --------------------------------------SLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEV  421 (520)
Q Consensus       380 --------------------------------------~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a  421 (520)
                                                            ..+...+........+...++++.++.++.. ..++.+++.+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~-~~~~~~~~~~  304 (457)
T d1xm9a1         226 VPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGK-SKKDATLEAC  304 (457)
T ss_dssp             SCCHHHHHHHTC----------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHH-CCCHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhc-ccchHHHHHH
Confidence                                                  1111222333444445556778889998874 4678999999


Q ss_pred             HHHHHHHhcCCHH-----HHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHH
Q 010019          422 MSIITVLSLRSPE-----NAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAK  496 (520)
Q Consensus       422 ~~aL~nLa~~~~~-----~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~  496 (520)
                      ++++.+++.....     ....+.+.|+++.++.+|..  .++.+++.++++|+|| +++++++..+.+.|+.+++. ++
T Consensus       305 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~L~~~l~~--~~~~v~~~a~~~l~~L-a~~~~~~~~i~~~~i~~li~-~L  380 (457)
T d1xm9a1         305 AGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQS--GNSDVVRSGASLLSNM-SRHPLLHRVMGNQVFPEVTR-LL  380 (457)
T ss_dssp             HHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHHHHHTTC--SCHHHHHHHHHHHHHH-HTSGGGHHHHHHHTHHHHHH-TT
T ss_pred             HHHHHHHhhccccchHHHHHHHHHHcCChHHHHhhhcC--ccHHHHHHHHHHHHHH-hhChhHHHHHHHhhHHHHHH-HH
Confidence            9999999865432     23445678999999999954  6899999999999999 57889988888877666664 33


Q ss_pred             HhCc-------chHHHHHHHHHHcCCCC
Q 010019          497 ENHE-------ICKDAATDALRDLGLDD  517 (520)
Q Consensus       497 ~~h~-------~~~~~a~aALr~Lg~~~  517 (520)
                      ..+.       +....+..+|++|..++
T Consensus       381 ~~~~~~~~~~~~v~~~a~~~L~~l~~~~  408 (457)
T d1xm9a1         381 TSHTGNTSNSEDILSSACYTVRNLMASQ  408 (457)
T ss_dssp             TSCCSCSTTHHHHHHHHHHHHHHHHTTC
T ss_pred             hccccCcCCcHHHHHHHHHHHHHHhcCC
Confidence            3321       13445788899887554


No 9  
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80  E-value=3.8e-19  Score=172.69  Aligned_cols=204  Identities=15%  Similarity=0.142  Sum_probs=173.4

Q ss_pred             hHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhcc-ChhhHHHHHhc
Q 010019          275 NDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAV-NDEICKSVAEN  353 (520)
Q Consensus       275 ~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~-~~e~~~~i~~~  353 (520)
                      .+....|+.+|.+|+.+.|          +++.+.+.||+++|+..+-++++++++..++++|++++. ++..+..+++.
T Consensus        31 ~~~~~~Al~~L~~L~~~~d----------~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~  100 (264)
T d1xqra1          31 QQEREGALELLADLCENMD----------NAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGL  100 (264)
T ss_dssp             HHHHHHHHHHHHHHHTSHH----------HHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCHH----------HHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3667779999999997654          355888999999999865555678899999999999996 55677788999


Q ss_pred             CChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhC-CCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCC
Q 010019          354 GGIDALLRCIDDSGLQGNKTVARICCSLLSKLAG-SDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRS  432 (520)
Q Consensus       354 Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~-~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~  432 (520)
                      |+++.|+.+|....   +..++..++++|++|+. ++.++..+.+.||++.|+.+|+  ++++.+++.++++|++|+..+
T Consensus       101 ~~i~~Lv~lL~~~~---~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~--~~~~~~~~~a~~~L~~l~~~~  175 (264)
T d1xqra1         101 GALRKLLRLLDRDA---CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQ--QQVQKLKVKSAFLLQNLLVGH  175 (264)
T ss_dssp             THHHHHHHHHHHCS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH--SSCHHHHHHHHHHHHHHHHHC
T ss_pred             CchHHHHHHhhcCC---CHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHh--cCchHHHHHHHHHHHHHHhcc
Confidence            99999999998642   34899999999999995 5677888999999999999998  779999999999999999989


Q ss_pred             HHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhC--CHHHHHHHH
Q 010019          433 PENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSN--GVEKLIRQA  495 (520)
Q Consensus       433 ~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~--G~~~lL~~~  495 (520)
                      ++++..+.+.|+++.++.+|..  .++.+++.|+++|.+|+..+++....+...  +....+...
T Consensus       176 ~~~~~~~~~~~~v~~L~~lL~~--~~~~~~~~a~~aL~~L~~~~~~~~~~~~~~~l~~~~~L~~~  238 (264)
T d1xqra1         176 PEHKGTLCSMGMVQQLVALVRT--EHSPFHEHVLGALCSLVTDFPQGVRECREPELGLEELLRHR  238 (264)
T ss_dssp             GGGHHHHHHTTHHHHHHHHHTS--CCSTHHHHHHHHHHHHHTTCHHHHHHHHCGGGCHHHHHHHH
T ss_pred             HHHHHHHHHhhhHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcCHHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999999999999954  578899999999999988888888777654  445555544


No 10 
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79  E-value=3.1e-18  Score=166.08  Aligned_cols=196  Identities=14%  Similarity=0.170  Sum_probs=166.9

Q ss_pred             ChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHH-HHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHH
Q 010019          232 DPEILNSGFAVVAASATGNEVVKESYMELKIDELILE-ILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAK  310 (520)
Q Consensus       232 ~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~-lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~  310 (520)
                      +.+....|+.+|.+++. +.+++..+.+.|++++|+. ++++.+.+++..|+++|++++.++..         ....+.+
T Consensus        30 ~~~~~~~Al~~L~~L~~-~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~---------~~~~~~~   99 (264)
T d1xqra1          30 DQQEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAA---------IQEQVLG   99 (264)
T ss_dssp             HHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHH---------HHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
Confidence            45677789999999984 6778999999999999986 56665668889999999999986532         1235668


Q ss_pred             cCCHHHHHHHHhcCCChhHHHHHHHHHHHhc-cChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhh-CC
Q 010019          311 IGIARALVHSLHAGLSSPSLISASIALKAVA-VNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLA-GS  388 (520)
Q Consensus       311 ~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La-~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La-~~  388 (520)
                      .|++|+|+.+|.+.+++.++..++++|++|+ .++.+...+.+.||++.|+.+|.+.    +..++..++++|++|+ ++
T Consensus       100 ~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~----~~~~~~~a~~~L~~l~~~~  175 (264)
T d1xqra1         100 LGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ----VQKLKVKSAFLLQNLLVGH  175 (264)
T ss_dssp             TTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS----CHHHHHHHHHHHHHHHHHC
T ss_pred             cCchHHHHHHhhcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcC----chHHHHHHHHHHHHHHhcc
Confidence            9999999999987667788999999999999 5667788999999999999999863    3589999999999997 67


Q ss_pred             CchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcC
Q 010019          389 DSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAG  443 (520)
Q Consensus       389 ~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G  443 (520)
                      ++++..+++.|+++.|+.+|+  ++++.+++.++++|.+|+..+++....+...+
T Consensus       176 ~~~~~~~~~~~~v~~L~~lL~--~~~~~~~~~a~~aL~~L~~~~~~~~~~~~~~~  228 (264)
T d1xqra1         176 PEHKGTLCSMGMVQQLVALVR--TEHSPFHEHVLGALCSLVTDFPQGVRECREPE  228 (264)
T ss_dssp             GGGHHHHHHTTHHHHHHHHHT--SCCSTHHHHHHHHHHHHHTTCHHHHHHHHCGG
T ss_pred             HHHHHHHHHhhhHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHhh
Confidence            899999999999999999998  67899999999999999998888877776543


No 11 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.42  E-value=2.2e-05  Score=79.43  Aligned_cols=319  Identities=15%  Similarity=0.131  Sum_probs=195.6

Q ss_pred             cHHHHHHHHhhcccCcHHHHHHHHHHHHHhhcccccchhHH---hcCCcH---HHHHHHhcCCCChHHHHHHHHHHHHHh
Q 010019          174 GVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFR---TGGGPK---LLVNILIDGNEDPEILNSGFAVVAASA  247 (520)
Q Consensus       174 aip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~~~~~i~---~~ggi~---~Lv~lL~~~~~~~~v~~~a~~~L~~~~  247 (520)
                      ++..++.+|+..  ...++....|..+.-++.+++.+..++   .....+   ++..+|.  .++.-++..++..+..++
T Consensus        75 ~~~~~l~lL~~~--sk~d~vqyvL~Li~dLL~~d~~~~~~~~~~~~~~~~~~~~f~~~l~--~~d~~~~~~s~~i~~ll~  150 (477)
T d1ho8a_          75 TLIPLIHLLSTS--DNEDCKKSVQNLIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLK--GDFQTVLISGFNVVSLLV  150 (477)
T ss_dssp             THHHHHHHHHSC--CCHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHCTTHHHHHHHHCSC--SSHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhc--CcHHHHHHHHHHHHHHHhcCcchhHHHHHHhhCccchhHHHHHhcc--CchhHHHHHHHHHHHHHH
Confidence            577889999865  356777778888887776654333332   111111   2222222  233345556666666665


Q ss_pred             cCChhhHHHHHhcCCHHHHHHHHhc-CChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHH--HcCCHHHHHHHHhcC
Q 010019          248 TGNEVVKESYMELKIDELILEILSR-QRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFA--KIGIARALVHSLHAG  324 (520)
Q Consensus       248 ~~~e~nr~~i~~~g~i~~Lv~lL~~-~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~--~~g~l~~Lv~lL~~~  324 (520)
                      .....+....-...-...++..|.. ...+.+.-+...|..|...+..|.          .+.  +...+++|++.|+..
T Consensus       151 ~~~~~~~~~~e~l~~~~~~l~~l~~~~~~~~~~i~v~~lq~llr~~~~R~----------~fw~~~~~~~~~l~~il~~a  220 (477)
T d1ho8a_         151 QNGLHNVKLVEKLLKNNNLINILQNIEQMDTCYVCIRLLQELAVIPEYRD----------VIWLHEKKFMPTLFKILQRA  220 (477)
T ss_dssp             STTTCCHHHHHHHHHCHHHHHHHHCTTCHHHHHHHHHHHHHHHTSHHHHH----------HHHTTHHHHHHHHHHHHHHH
T ss_pred             hccccccchHHHHHHhhHHHHHhhcccccchHHHHHHHHHHHhcCccHHH----------HHHHcccchHHHHHHHHHHH
Confidence            4322222111111111233333433 333555556777888887665554          332  234567777777641


Q ss_pred             ----------------CChhHHHHHHHHHHHhccChhhHHHHHhcC--ChHHHHHHHhccCCCCcHHHHHHHHHHHHHhh
Q 010019          325 ----------------LSSPSLISASIALKAVAVNDEICKSVAENG--GIDALLRCIDDSGLQGNKTVARICCSLLSKLA  386 (520)
Q Consensus       325 ----------------~~~~~~~~a~~aL~~La~~~e~~~~i~~~G--gv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La  386 (520)
                                      ....++-.++.++|-|+.+++.+..+.+.+  .|+.++++++..+.+   .+++-++.+|+||.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlLSF~~~~~~~l~~~~~~~i~~l~~i~~~s~KE---KvvRv~l~~l~Nll  297 (477)
T d1ho8a_         221 TDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKE---KVSRLCISIILQCC  297 (477)
T ss_dssp             HC-------------CCHHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHCCSH---HHHHHHHHHHHHTT
T ss_pred             hcccccchhhcccCCCccHHHHHHHHHHHHHHHcCHHHHHHHHHhhhHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHh
Confidence                            012456789999999999999888888764  488899999876543   89999999999998


Q ss_pred             CCCc--h----HHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhc---------------------CCH------
Q 010019          387 GSDS--N----KSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSL---------------------RSP------  433 (520)
Q Consensus       387 ~~~~--~----k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~---------------------~~~------  433 (520)
                      ..+.  +    ...++..++++.+-.+..++-.++++.+.--..--.|-.                     -+|      
T Consensus       298 ~~~~~~~~~~~~~~~v~~~~l~~l~~L~~r~~~Dedl~edl~~L~~~L~~~~k~lTsfd~Y~~Ev~Sg~L~WSP~H~se~  377 (477)
T d1ho8a_         298 STRVKQHKKVIKQLLLLGNALPTVQSLSERKYSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNG  377 (477)
T ss_dssp             SSSSTTHHHHHHHHHHHHCHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHH
T ss_pred             hhhhhhhhhHHHHHHHHcchhHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHhcCCCCCCCCcCChh
Confidence            5432  2    334566677776666666666788876543322111110                     122      


Q ss_pred             ---HHHHHHHhcC--cHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHHHhCc
Q 010019          434 ---ENAARAMEAG--SGDLAIQAMLK--------FPNAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAKENHE  500 (520)
Q Consensus       434 ---~~~~~i~~~G--~i~~lv~~L~~--------~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~~~h~  500 (520)
                         +|+..+-+.+  .+..|+++|+.        .++++.+..-||--|..++...|+-+..+-+.|+-..++++| .|+
T Consensus       378 FW~EN~~kf~e~~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~gr~il~~lg~K~~vM~Lm-~h~  456 (477)
T d1ho8a_         378 FWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELL-NHS  456 (477)
T ss_dssp             HHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHT-SCS
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHHCcchhHHHHHcCcHHHHHHHh-cCC
Confidence               2222222222  36788888863        235788888999999999988999999888889999999988 664


Q ss_pred             chHHHHHHHHH
Q 010019          501 ICKDAATDALR  511 (520)
Q Consensus       501 ~~~~~a~aALr  511 (520)
                       ..++.+.||.
T Consensus       457 -d~~Vr~eAL~  466 (477)
T d1ho8a_         457 -DSRVKYEALK  466 (477)
T ss_dssp             -SHHHHHHHHH
T ss_pred             -CHHHHHHHHH
Confidence             4555555554


No 12 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35  E-value=5.5e-05  Score=78.70  Aligned_cols=297  Identities=11%  Similarity=0.039  Sum_probs=180.3

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      |..|.+.+.+       .|......+++.|..++.. -+++ |.   ....+|.|.++++.    +.++...+.+.|+.+
T Consensus        12 i~~l~~~l~~-------~~~~~R~~a~~~l~~ia~~-lg~~-~~---~~~lip~l~~~~~~----~~ev~~~~~~~l~~~   75 (588)
T d1b3ua_          12 IAVLIDELRN-------EDVQLRLNSIKKLSTIALA-LGVE-RT---RSELLPFLTDTIYD----EDEVLLALAEQLGTF   75 (588)
T ss_dssp             HHHHHHHTTC-------SCHHHHHHHHHTHHHHHHH-SCHH-HH---HHTHHHHHHHTCCC----CHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcC-------CCHHHHHHHHHHHHHHHHH-hCcH-hh---HHHHHHHHHHHhcC----cHHHHHHHHHHHHHH
Confidence            4556666766       6788888899999888763 1222 11   23568888887754    345665566666665


Q ss_pred             hcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHH
Q 010019          204 VHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLYD  283 (520)
Q Consensus       204 ~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~  283 (520)
                      .....+ +..+ ..-++.+..++.  .++..+...|+.++..++....  ...+ +.-.+|.+..+..+........|+.
T Consensus        76 ~~~~~~-~~~~-~~ll~~l~~l~~--~~~~~Vr~~a~~~l~~i~~~~~--~~~~-~~~l~p~i~~L~~~~~~~~r~~a~~  148 (588)
T d1b3ua_          76 TTLVGG-PEYV-HCLLPPLESLAT--VEETVVRDKAVESLRAISHEHS--PSDL-EAHFVPLVKRLAGGDWFTSRTSACG  148 (588)
T ss_dssp             SGGGTS-GGGG-GGGHHHHHHHTT--SSCHHHHHHHHHHHHHHHTTSC--HHHH-HHTHHHHHHHHHTCSSHHHHHHHGG
T ss_pred             HHHcCC-hhHH-HHHHHHHHHHcc--CCCHHHHHHHHHHHHHHHHhCC--HHHH-HHHHHHHHHHHhcccchHHHHHHHH
Confidence            421100 1110 112344444443  4578899999999998875433  2222 2234454445555433355555777


Q ss_pred             HHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccC--hhhHHHHHhcCChHHHHH
Q 010019          284 AIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVN--DEICKSVAENGGIDALLR  361 (520)
Q Consensus       284 aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~--~e~~~~i~~~Ggv~~Ll~  361 (520)
                      .+..+...-+.            ... ...++.+.+++++ .++.+.+.++.++..++..  .+.    .....++.+..
T Consensus       149 ll~~~~~~~~~------------~~~-~~l~~~~~~l~~D-~~~~VR~~a~~~l~~~~~~~~~~~----~~~~l~~~l~~  210 (588)
T d1b3ua_         149 LFSVCYPRVSS------------AVK-AELRQYFRNLCSD-DTPMVRRAAASKLGEFAKVLELDN----VKSEIIPMFSN  210 (588)
T ss_dssp             GHHHHTTTSCH------------HHH-HHHHHHHHHHHTC-SCHHHHHHHHHHHHHHHHTSCHHH----HHHTHHHHHHH
T ss_pred             HHHHHHHHhhH------------HHH-HHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHhcHHH----HHHHHHHHHHH
Confidence            67766543221            111 1236777777764 4578889999999998742  222    22233456666


Q ss_pred             HHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHh
Q 010019          362 CIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAME  441 (520)
Q Consensus       362 lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~  441 (520)
                      ++.+    ++..+...++.+|..++..-....  ...-.+|.+..+++  ..+..|+..++.+|..++..-   ......
T Consensus       211 l~~d----~~~~vr~~a~~~l~~i~~~~~~~~--~~~~i~~~l~~~~~--D~~~~Vr~~~~~~l~~l~~~~---~~~~~~  279 (588)
T d1b3ua_         211 LASD----EQDSVRLLAVEACVNIAQLLPQED--LEALVMPTLRQAAE--DKSWRVRYMVADKFTELQKAV---GPEITK  279 (588)
T ss_dssp             HHTC----SCHHHHTTHHHHHHHHHHHSCHHH--HHHHTHHHHHHHHT--CSSHHHHHHHHHTHHHHHHHH---CHHHHH
T ss_pred             HhcC----CchhhHHHHHHHHHHhhccCCHHH--HHHHHHHHHHHhcc--cccHHHHHHHHHhHHHHHHHh---hhhhhh
Confidence            6554    235788899999998874322111  11235778888886  568899999999999987411   112223


Q ss_pred             cCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 010019          442 AGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       442 ~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      ...++.+..++..  .++.++..|+.++..++.
T Consensus       280 ~~l~~~l~~ll~d--~~~~vr~~a~~~l~~~~~  310 (588)
T d1b3ua_         280 TDLVPAFQNLMKD--CEAEVRAAASHKVKEFCE  310 (588)
T ss_dssp             HTHHHHHHHHHTC--SSHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhc--cchHHHHHHHHHHHHHHH
Confidence            3467788887754  578999999999988864


No 13 
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30  E-value=3.8e-05  Score=80.03  Aligned_cols=303  Identities=11%  Similarity=0.025  Sum_probs=178.3

Q ss_pred             cCcHHHHHHHHhhcccCcHHHHHHHHHHHHHhhcccc--cchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcC
Q 010019          172 NGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQ--STETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATG  249 (520)
Q Consensus       172 ~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~--~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~  249 (520)
                      ...+|.+..+++..   +.++...++..+..++..-.  ......-...++.+...+.  ..+..+...++.++..++..
T Consensus       280 ~~l~~~l~~ll~d~---~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~~--d~~~~vr~~~~~~l~~~~~~  354 (588)
T d1b3ua_         280 TDLVPAFQNLMKDC---EAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVS--DANQHVKSALASVIMGLSPI  354 (588)
T ss_dssp             HTHHHHHHHHHTCS---SHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHHT--CSCHHHHHHHHTTGGGGHHH
T ss_pred             hhhhHHHHHHHhcc---chHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhhc--CCChHHHHHHHHHHhhhhhc
Confidence            34677777777763   67777777777776653321  1122222344566666654  34566766666665544321


Q ss_pred             ChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhH
Q 010019          250 NEVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPS  329 (520)
Q Consensus       250 ~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~  329 (520)
                        ..+... ....++.+...++....++...+...+..+...-..           ..+. ...+|.+..++++. +..+
T Consensus       355 --~~~~~~-~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~-----------~~~~-~~ll~~l~~~~~d~-~~~~  418 (588)
T d1b3ua_         355 --LGKDNT-IEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI-----------RQLS-QSLLPAIVELAEDA-KWRV  418 (588)
T ss_dssp             --HCHHHH-HHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH-----------HHHH-HHHHHHHHHHHTCS-SHHH
T ss_pred             --cchhHH-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcch-----------hhhh-hHHHHHHHHHHhcc-cHHH
Confidence              111111 234678888888876667777766555544321100           0111 23577788887753 4567


Q ss_pred             HHHHHHHHHHhcc--ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHH
Q 010019          330 LISASIALKAVAV--NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVV  407 (520)
Q Consensus       330 ~~~a~~aL~~La~--~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~l  407 (520)
                      ...++.++..++.  ..+.    ......+.++.++.+    ....|...|+.+|+.|+..-.. ... ....++.+.++
T Consensus       419 r~~~~~~l~~l~~~~~~~~----~~~~l~~~l~~~l~D----~~~~VR~~A~~~L~~l~~~~~~-~~~-~~~i~~~l~~~  488 (588)
T d1b3ua_         419 RLAIIEYMPLLAGQLGVEF----FDEKLNSLCMAWLVD----HVYAIREAATSNLKKLVEKFGK-EWA-HATIIPKVLAM  488 (588)
T ss_dssp             HHHHHHHHHHHHHHHCGGG----CCHHHHHHHHHGGGC----SSHHHHHHHHHHHHHHHHHHCH-HHH-HHHTHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcChHh----HHHHHHHHHHhhccC----CchhHHHHHHHHHHHHHHHhCc-HHH-HHHHHHHHHHH
Confidence            7888888887762  2222    111123445555554    2358999999999999732111 111 12356777777


Q ss_pred             HhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCC
Q 010019          408 SARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNG  487 (520)
Q Consensus       408 L~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G  487 (520)
                      +.  +.+..++..++.++..+....+   ........++.+++++..  ..+.|+..++++|..+....+.   ..+...
T Consensus       489 ~~--~~~~~~R~~~~~~l~~l~~~~~---~~~~~~~ilp~ll~~~~D--~v~nVR~~a~~~l~~i~~~~~~---~~~~~~  558 (588)
T d1b3ua_         489 SG--DPNYLHRMTTLFCINVLSEVCG---QDITTKHMLPTVLRMAGD--PVANVRFNVAKSLQKIGPILDN---STLQSE  558 (588)
T ss_dssp             TT--CSCHHHHHHHHHHHHHHHHHHH---HHHHHHHTHHHHHHGGGC--SCHHHHHHHHHHHHHHGGGSCH---HHHHHH
T ss_pred             hc--CCCHHHHHHHHHHHHHHHHHcC---hHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHcCc---HhHHHH
Confidence            65  6678888888888888764211   122334467888887754  4688999999999999543221   223344


Q ss_pred             HHHHHHHHHHhC-cchHHHHHHHHHHcCC
Q 010019          488 VEKLIRQAKENH-EICKDAATDALRDLGL  515 (520)
Q Consensus       488 ~~~lL~~~~~~h-~~~~~~a~aALr~Lg~  515 (520)
                      +.+++..++... ++++..|..||.-|.+
T Consensus       559 i~~~l~~L~~D~d~dVr~~A~~al~~l~~  587 (588)
T d1b3ua_         559 VKPILEKLTQDQDVDVKYFAQEALTVLSL  587 (588)
T ss_dssp             HHHHHHHHTTCSSHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHcCCCCHHHHHHHHHHHHHHhc
Confidence            567777654222 3567779999998864


No 14 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.27  E-value=1.1e-05  Score=85.25  Aligned_cols=267  Identities=13%  Similarity=0.140  Sum_probs=150.7

Q ss_pred             HHHHHHHHhhcccCcHHHHHHHHHHHHHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhH
Q 010019          175 VELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVK  254 (520)
Q Consensus       175 ip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr  254 (520)
                      +|.+.++|.+   .++.+...|..++..+....+  ..+...+.++.+.++|.  ..++.+...|+.++..++..+....
T Consensus       120 ~~~l~~~L~D---~~p~VRk~Aa~~l~kl~~~~p--~~~~~~~~~~~L~~lL~--D~n~~V~~~Al~~L~~I~~~~~~~~  192 (579)
T d2vglb_         120 CEPLRKCLKD---EDPYVRKTAAVCVAKLHDINA--QMVEDQGFLDSLRDLIA--DSNPMVVANAVAALSEISESHPNSN  192 (579)
T ss_dssp             HHHHHHHSSC---SCHHHHHHHHHHHHHHHHSSC--CCHHHHHHHHHHHHTTS--CSCHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             HHHHHHHHhc---CcHHHHHHHHHHHHHHhccCh--hhhhhhhHHHHHHHHHc--CCChHHHHHHHHHHHHHHHhCccch
Confidence            5555666654   477888888888887764432  23334455677777775  4578999999999999876543321


Q ss_pred             HHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHH
Q 010019          255 ESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISAS  334 (520)
Q Consensus       255 ~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~  334 (520)
                      ..-...+.+..|+..+...++-.+..++.+|..++..++..         +..     .++.+...|++ .++.+...++
T Consensus       193 ~~~l~~~~i~~Ll~~l~~~~~~~q~~il~~L~~~~~~~~~~---------~~~-----li~~l~~~L~~-~n~~V~~~a~  257 (579)
T d2vglb_         193 LLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE---------AQS-----ICERVTPRLSH-ANSAVVLSAV  257 (579)
T ss_dssp             SCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHH---------HHH-----HHHHHTTCSCS-STTHHHHHHH
T ss_pred             hHHhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhCCCCHHH---------HHH-----HHHHHHHHHcC-chHHHHHHHH
Confidence            11112234667777777766666667778887766543211         111     23344444433 2445556666


Q ss_pred             HHHHHhcc----ChhhHHHHHhcCChHHHHHHHhc------------------cC-------------CCCcHHHHHHHH
Q 010019          335 IALKAVAV----NDEICKSVAENGGIDALLRCIDD------------------SG-------------LQGNKTVARICC  379 (520)
Q Consensus       335 ~aL~~La~----~~e~~~~i~~~Ggv~~Ll~lL~~------------------~~-------------~~~~~~v~~~al  379 (520)
                      .++..+..    ..+....+.+. ..++++.+++.                  .+             ...+..+...++
T Consensus       258 ~~i~~~~~~~~~~~~~~~~~~~~-l~~~l~~L~s~~~ei~y~aL~~i~~l~~~~p~~l~~~~~~~~~~~~d~~~ik~~~L  336 (579)
T d2vglb_         258 KVLMKFLELLPKDSDYYNMLLKK-LAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKL  336 (579)
T ss_dssp             HHHHHSCCSCCBTTBSHHHHHHH-THHHHHHHTTSCHHHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHH
T ss_pred             HHHHHHHhcCCcchHHHHHHHHH-hhHHHHHHhcCCchHHHHHHHHHHHHHHhCHHHHHHHHHHHHhhcCChHHHHHHHH
Confidence            66655431    11222222221 12233332221                  00             001134445555


Q ss_pred             HHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCH
Q 010019          380 SLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQ  459 (520)
Q Consensus       380 ~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~  459 (520)
                      .+|..|+ +++|...|     ++.|.+.+.  ..+..+++.++.+|..++.+.++....+     ++.+++++..  +..
T Consensus       337 ~iL~~l~-~~~n~~~I-----l~eL~~y~~--~~d~~~~~~ai~aI~~la~~~~~~~~~~-----i~~Ll~ll~~--~~~  401 (579)
T d2vglb_         337 DIMIRLA-SQANIAQV-----LAELKEYAT--EVDVDFVRKAVRAIGRCAIKVEQSAERC-----VSTLLDLIQT--KVN  401 (579)
T ss_dssp             HHHHHTC-CSSTHHHH-----HHHHHHHTT--SSCHHHHHHHHHHHHHHHTTCHHHHHHH-----HHHHHHHHHT--CCH
T ss_pred             HHHHHHc-ChhhHHHH-----HHHHHHHhh--cCCHHHHHHHHHHHHHHHHhCchHHHHH-----HHHHHHHHhC--Cch
Confidence            5555554 22233322     233444444  4578999999999999998877765544     4567777764  355


Q ss_pred             HHHHHHHHHHHHHhhhChhh
Q 010019          460 QLQRSSCFMIRNLVARNPEN  479 (520)
Q Consensus       460 ~vqk~A~~aL~nL~~~~~e~  479 (520)
                      .+..++...++++..++|+.
T Consensus       402 ~v~~e~i~~i~~i~~~~p~~  421 (579)
T d2vglb_         402 YVVQEAIVVIRDIFRKYPNK  421 (579)
T ss_dssp             HHHHHHHHHHHHHHHHSCSS
T ss_pred             hHHHHHHHHHHHHHHhChHH
Confidence            66677778888887666654


No 15 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=98.21  E-value=0.00014  Score=67.38  Aligned_cols=253  Identities=13%  Similarity=0.054  Sum_probs=160.7

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      .+.|...+.+       .|+.....|+..|.....             ..++|.|+.+|++.   +..+...|+.+|..+
T Consensus        21 ~~~L~~~L~d-------~~~~vR~~A~~~L~~~~~-------------~~~~~~l~~~l~d~---~~~vr~~a~~aL~~l   77 (276)
T d1oyza_          21 DDELFRLLDD-------HNSLKRISSARVLQLRGG-------------QDAVRLAIEFCSDK---NYIRRDIGAFILGQI   77 (276)
T ss_dssp             HHHHHHHTTC-------SSHHHHHHHHHHHHHHCC-------------HHHHHHHHHHHTCS---SHHHHHHHHHHHHHS
T ss_pred             HHHHHHHhcC-------CCHHHHHHHHHHHHhhCC-------------HhHHHHHHHHHcCC---CHHHHHHHHHHHHHh
Confidence            4567777766       677777888888876432             13689999999864   788888888888876


Q ss_pred             hcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHH
Q 010019          204 VHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLYD  283 (520)
Q Consensus       204 ~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~  283 (520)
                      .......+.     ..+.+...+.+ ..++.+...++.++..++........     ..++.+...+......+...++.
T Consensus        78 ~~~~~~~~~-----~~~~l~~~~l~-d~~~~vr~~a~~aL~~~~~~~~~~~~-----~~~~~l~~~~~d~~~~vr~~a~~  146 (276)
T d1oyza_          78 KICKKCEDN-----VFNILNNMALN-DKSACVRATAIESTAQRCKKNPIYSP-----KIVEQSQITAFDKSTNVRRATAF  146 (276)
T ss_dssp             CCCTTTHHH-----HHHHHHHHHHH-CSCHHHHHHHHHHHHHHHHHCGGGHH-----HHHHHHHHHTTCSCHHHHHHHHH
T ss_pred             ccccccccc-----hHHHHHHHHhc-CCChhHHHHHHHHHHHHccccchhhH-----HHHHHHHHHhcCcchHHHHHHHH
Confidence            432211111     13344444432 45788999999999888754332222     24556666666555466666776


Q ss_pred             HHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHHHHH
Q 010019          284 AIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCI  363 (520)
Q Consensus       284 aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll~lL  363 (520)
                      ++....                    ....++.+..++... +..+...+..++.........        .++.++..+
T Consensus       147 ~l~~~~--------------------~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  197 (276)
T d1oyza_         147 AISVIN--------------------DKATIPLLINLLKDP-NGDVRNWAAFAININKYDNSD--------IRDCFVEML  197 (276)
T ss_dssp             HHHTC-----------------------CCHHHHHHHHTCS-SHHHHHHHHHHHHHHTCCCHH--------HHHHHHHHT
T ss_pred             HHhhcc--------------------hHHHHHHHHHhcccc-cchhhhhHHHHHHhhhccccc--------cchhhhhhh
Confidence            666432                    124577888887653 455666666666665533211        122344444


Q ss_pred             hccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcC
Q 010019          364 DDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAG  443 (520)
Q Consensus       364 ~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G  443 (520)
                      ..    .+..+...+..+++.+.          ...+++.|++.++    ++.++..++.+|..+..           .+
T Consensus       198 ~~----~~~~~~~~~~~al~~~~----------~~~~~~~L~~~l~----d~~vr~~a~~aL~~ig~-----------~~  248 (276)
T d1oyza_         198 QD----KNEEVRIEAIIGLSYRK----------DKRVLSVLCDELK----KNTVYDDIIEAAGELGD-----------KT  248 (276)
T ss_dssp             TC----SCHHHHHHHHHHHHHTT----------CGGGHHHHHHHHT----SSSCCHHHHHHHHHHCC-----------GG
T ss_pred             hh----hhhhhhhhhccccchhh----------hhhhHHHHHHHhC----ChHHHHHHHHHHHHcCC-----------HH
Confidence            43    23577788888876653          2346888999886    34588899999998752           35


Q ss_pred             cHHHHHHHHHhCCCCHHHHHHHHHHH
Q 010019          444 SGDLAIQAMLKFPNAQQLQRSSCFMI  469 (520)
Q Consensus       444 ~i~~lv~~L~~~~~~~~vqk~A~~aL  469 (520)
                      .++.|..+|..+ ++..|++.|.-+|
T Consensus       249 ~~~~L~~~l~~~-~d~~vr~~A~~~L  273 (276)
T d1oyza_         249 LLPVLDTMLYKF-DDNEIITSAIDKL  273 (276)
T ss_dssp             GHHHHHHHHTTS-SCCHHHHHHHHHH
T ss_pred             HHHHHHHHHccC-CCHHHHHHHHHHH
Confidence            778888888765 4677888877665


No 16 
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.17  E-value=6.6e-05  Score=78.98  Aligned_cols=307  Identities=11%  Similarity=0.068  Sum_probs=184.0

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      +..++..+..       .++.....|+..+.++.+.  +++   .+...|.+|.|.++|...   ++.+...|+.++..+
T Consensus       120 ~~~l~~~L~D-------~~p~VRk~Aa~~l~kl~~~--~p~---~~~~~~~~~~L~~lL~D~---n~~V~~~Al~~L~~I  184 (579)
T d2vglb_         120 CEPLRKCLKD-------EDPYVRKTAAVCVAKLHDI--NAQ---MVEDQGFLDSLRDLIADS---NPMVVANAVAALSEI  184 (579)
T ss_dssp             HHHHHHHSSC-------SCHHHHHHHHHHHHHHHHS--SCC---CHHHHHHHHHHHHTTSCS---CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhc-------CcHHHHHHHHHHHHHHhcc--Chh---hhhhhhHHHHHHHHHcCC---ChHHHHHHHHHHHHH
Confidence            4455555543       5666667777777777764  333   234567788888888763   788999999999888


Q ss_pred             hcccccchhH-HhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHH
Q 010019          204 VHDVQSTETF-RTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLY  282 (520)
Q Consensus       204 ~~~~~~~~~i-~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~  282 (520)
                      ....+....+ ...+.++.++..+..  .++..+...+.++...+...+.....     .++.+...|++.+..++..++
T Consensus       185 ~~~~~~~~~~~l~~~~i~~Ll~~l~~--~~~~~q~~il~~L~~~~~~~~~~~~~-----li~~l~~~L~~~n~~V~~~a~  257 (579)
T d2vglb_         185 SESHPNSNLLDLNPQNINKLLTALNE--CTEWGQIFILDCLSNYNPKDDREAQS-----ICERVTPRLSHANSAVVLSAV  257 (579)
T ss_dssp             TTSCCSCCSCCCHHHHHHHHHHHHHH--CCHHHHHHHHHHHHTSCCCSHHHHHH-----HHHHHTTCSCSSTTHHHHHHH
T ss_pred             HHhCccchhHHhhHHHHHHHHhccCC--CCHHHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHHcCchHHHHHHHH
Confidence            7543221111 112345566666663  46778888888887665433322222     344555555555557777888


Q ss_pred             HHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhc-cChh----------------
Q 010019          283 DAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVA-VNDE----------------  345 (520)
Q Consensus       283 ~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La-~~~e----------------  345 (520)
                      .++..+........      +....+.+ ...++++.++.+  +++++..++..+..++ ..++                
T Consensus       258 ~~i~~~~~~~~~~~------~~~~~~~~-~l~~~l~~L~s~--~~ei~y~aL~~i~~l~~~~p~~l~~~~~~~~~~~~d~  328 (579)
T d2vglb_         258 KVLMKFLELLPKDS------DYYNMLLK-KLAPPLVTLLSG--EPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDP  328 (579)
T ss_dssp             HHHHHSCCSCCBTT------BSHHHHHH-HTHHHHHHHTTS--CHHHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSC
T ss_pred             HHHHHHHhcCCcch------HHHHHHHH-HhhHHHHHHhcC--CchHHHHHHHHHHHHHHhCHHHHHHHHHHHHhhcCCh
Confidence            88877654221110      00112221 234555555432  3444444454444442 1110                


Q ss_pred             --hHH-------HHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCC-chHHHHHhcCCHHHHHHHHhccCCCH
Q 010019          346 --ICK-------SVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSD-SNKSAIIENGGMDKLIVVSARFSDDA  415 (520)
Q Consensus       346 --~~~-------~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~-~~k~~Iv~~g~l~~Lv~lL~~~~~~~  415 (520)
                        .+.       .++....++.++.-|..+..+.+.++...++.+|+.++... +...     ..++.|++++.  ....
T Consensus       329 ~~ik~~~L~iL~~l~~~~n~~~Il~eL~~y~~~~d~~~~~~ai~aI~~la~~~~~~~~-----~~i~~Ll~ll~--~~~~  401 (579)
T d2vglb_         329 IYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAE-----RCVSTLLDLIQ--TKVN  401 (579)
T ss_dssp             HHHHHHHHHHHHHTCCSSTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCHHHHH-----HHHHHHHHHHH--TCCH
T ss_pred             HHHHHHHHHHHHHHcChhhHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhCchHHH-----HHHHHHHHHHh--CCch
Confidence              010       11223344555555544444456789999999999999643 2222     24678999998  6688


Q ss_pred             HHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 010019          416 SVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       416 ~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      .+.+.++.++.++..+.|+..     ...++.+.+.+.. -+++.+...++|.|...+.
T Consensus       402 ~v~~e~i~~i~~i~~~~p~~~-----~~ii~~L~~~l~~-~~~~~~~~~~iwilGEy~~  454 (579)
T d2vglb_         402 YVVQEAIVVIRDIFRKYPNKY-----ESIIATLCENLDS-LDEPDARAAMIWIVGEYAE  454 (579)
T ss_dssp             HHHHHHHHHHHHHHHHSCSSC-----CTTHHHHHHTTTT-CCSHHHHHHHHHHHHTTCT
T ss_pred             hHHHHHHHHHHHHHHhChHHH-----HHHHHHHHHHHHh-cCcHHHHHHHHHHHhCccc
Confidence            899999999999987666532     3567777777753 3578888889999987753


No 17 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.09  E-value=0.00013  Score=80.05  Aligned_cols=156  Identities=17%  Similarity=0.104  Sum_probs=94.7

Q ss_pred             hHHHHHHHHHHHhcc--ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCC-C-chHHHHHhcCCHHH
Q 010019          328 PSLISASIALKAVAV--NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGS-D-SNKSAIIENGGMDK  403 (520)
Q Consensus       328 ~~~~~a~~aL~~La~--~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~-~-~~k~~Iv~~g~l~~  403 (520)
                      +....++.++..+..  .......+....-++.++.++.+    .++++...++.+++.|+.. + ..+..+-  ..++.
T Consensus       637 ~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~----~~~~vr~~a~~llgdl~~~~~~~~~~~l~--~~~~~  710 (888)
T d1qbkb_         637 DFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQD----KMPEVRQSSFALLGDLTKACFQHVKPCIA--DFMPI  710 (888)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTC----SSHHHHHHHHHHHHHHHHHCGGGTGGGHH--HHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCC----CChHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHH
Confidence            344445555555541  22222333333445556666654    2358999999999988732 2 2211111  13455


Q ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHH
Q 010019          404 LIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLL  483 (520)
Q Consensus       404 Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l  483 (520)
                      ++..|.  .+.++++.+++|++..|+.+..+.....+ ...++.++..++.......+.+++|.+|.-|+..+|+.....
T Consensus       711 l~~~L~--~~~~~v~~~a~~~ig~ia~~~~~~~~py~-~~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~~p~~~~~~  787 (888)
T d1qbkb_         711 LGTNLN--PEFISVCNNATWAIGEISIQMGIEMQPYI-PMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPM  787 (888)
T ss_dssp             HHHTCC--GGGHHHHHHHHHHHHHHHHHTGGGGGGGS-HHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHCHHHHGGG
T ss_pred             HHHHhC--cCCHHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHCHHHHHhh
Confidence            555554  45678999999999999875444322222 135678888886544456688999999999987888876555


Q ss_pred             HhCCHHHHH
Q 010019          484 LSNGVEKLI  492 (520)
Q Consensus       484 ~~~G~~~lL  492 (520)
                      +..-+.+.+
T Consensus       788 l~~~~~~~~  796 (888)
T d1qbkb_         788 LQQFIRPWC  796 (888)
T ss_dssp             GGGTHHHHH
T ss_pred             HHHHHHHHH
Confidence            555444444


No 18 
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02  E-value=6.8e-05  Score=82.39  Aligned_cols=318  Identities=11%  Similarity=0.054  Sum_probs=163.8

Q ss_pred             cHHHHHHHHhhc-ccCcHHHHHHHHHHHHHhhcccccchhHHh--cCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCC
Q 010019          174 GVELVCSICYKM-RCGSKRVLDSCLKTMALLVHDVQSTETFRT--GGGPKLLVNILIDGNEDPEILNSGFAVVAASATGN  250 (520)
Q Consensus       174 aip~Lv~lL~~~-~~~~~~~~~~al~~La~l~~~~~~~~~i~~--~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~  250 (520)
                      .+|.++.++... ...+......|+.+++++..+-  ...+..  ...++.++..|+  +.++.+...++|+|+.++...
T Consensus       392 il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~--~~~~~~~l~~li~~l~~~l~--d~~~~Vr~~a~~~l~~~~~~~  467 (888)
T d1qbkb_         392 LLPHILPLLKELLFHHEWVVKESGILVLGAIAEGC--MQGMIPYLPELIPHLIQCLS--DKKALVRSITCWTLSRYAHWV  467 (888)
T ss_dssp             SHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTS--HHHHTTTHHHHHHHHHHHTT--SSCHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhH--HHHhcccchhhhHHHHHhcc--CCCHHHHHHHHHHHHHHHHHh
Confidence            466666665432 1235567777788888776432  111111  124566666665  457889999999998876321


Q ss_pred             h-hhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCc-chhhhhhchHHHHHHHcCCHHHHHHHHhcCCChh
Q 010019          251 E-VVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDD-QVVASQVYGYARRFAKIGIARALVHSLHAGLSSP  328 (520)
Q Consensus       251 e-~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~-~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~  328 (520)
                      . .....+ -...++.++..+......++..||++|.+++..... -.+      +...     .++.|+..+.... ..
T Consensus       468 ~~~~~~~~-~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p------~~~~-----il~~l~~~l~~~~-~~  534 (888)
T d1qbkb_         468 VSQPPDTY-LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVP------YLAY-----ILDTLVFAFSKYQ-HK  534 (888)
T ss_dssp             HSSCHHHH-TTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGG------GHHH-----HHHHHHHHTTTCC-HH
T ss_pred             hhhhhhhh-hhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhh------HHHH-----HHHHHHHHHhhhh-HH
Confidence            1 111222 235788888888876668888899999988742111 111      1111     1222333322211 11


Q ss_pred             HHHHHHHHHHHhcc-------ChhhHHH----------------------------HH---hcCCh-------HHHHHHH
Q 010019          329 SLISASIALKAVAV-------NDEICKS----------------------------VA---ENGGI-------DALLRCI  363 (520)
Q Consensus       329 ~~~~a~~aL~~La~-------~~e~~~~----------------------------i~---~~Ggv-------~~Ll~lL  363 (520)
                      ....+..++..++.       .++....                            ++   ..+..       +.++.++
T Consensus       535 ~~~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l  614 (888)
T d1qbkb_         535 NLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLV  614 (888)
T ss_dssp             HHHHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHH
Confidence            11111111111110       0000000                            00   00001       1111111


Q ss_pred             hc-------------cCCCCcHHHHHHHHHHHHHhhC--CCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHH
Q 010019          364 DD-------------SGLQGNKTVARICCSLLSKLAG--SDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVL  428 (520)
Q Consensus       364 ~~-------------~~~~~~~~v~~~al~aL~~La~--~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nL  428 (520)
                      ..             ..+..+.++...++.++..++.  .......+.....++.+...++  ..++.+++.+..++..|
T Consensus       615 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~--~~~~~vr~~a~~llgdl  692 (888)
T d1qbkb_         615 QKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQ--DKMPEVRQSSFALLGDL  692 (888)
T ss_dssp             HHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHT--CSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhC--CCChHHHHHHHHHHHHH
Confidence            10             0111223566677777777762  2223333444455677888887  66899999999999988


Q ss_pred             hcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHHHhC---cchHHH
Q 010019          429 SLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAKENH---EICKDA  505 (520)
Q Consensus       429 a~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~~~h---~~~~~~  505 (520)
                      +...+......++ ..++.++..+.  .....+..+|+|++..++.+.++.....+. .+.+.|...+..-   +...+.
T Consensus       693 ~~~~~~~~~~~l~-~~~~~l~~~L~--~~~~~v~~~a~~~ig~ia~~~~~~~~py~~-~il~~L~~il~~~~~~~~v~~n  768 (888)
T d1qbkb_         693 TKACFQHVKPCIA-DFMPILGTNLN--PEFISVCNNATWAIGEISIQMGIEMQPYIP-MVLHQLVEIINRPNTPKTLLEN  768 (888)
T ss_dssp             HHHCGGGTGGGHH-HHHHHHHHTCC--GGGHHHHHHHHHHHHHHHHHTGGGGGGGSH-HHHHHHHHHHTCTTCCHHHHHH
T ss_pred             HHhhhHHHHHHHH-HHHHHHHHHhC--cCCHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHcCCCccHHHHHH
Confidence            8644443322221 13444555453  246788899999999998655444333332 3445555555321   224455


Q ss_pred             HHHHHHHcC
Q 010019          506 ATDALRDLG  514 (520)
Q Consensus       506 a~aALr~Lg  514 (520)
                      +..||.+||
T Consensus       769 ~~~~lgrl~  777 (888)
T d1qbkb_         769 TAITIGRLG  777 (888)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777887775


No 19 
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=98.01  E-value=0.00032  Score=64.72  Aligned_cols=220  Identities=10%  Similarity=-0.019  Sum_probs=130.2

Q ss_pred             CcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchh
Q 010019          218 GPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVV  297 (520)
Q Consensus       218 gi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~  297 (520)
                      ..+.|+++|+  ++++.+...|+.+|....  .+         .+++.|+.+++..+..++..|+.+|..+........ 
T Consensus        20 ~~~~L~~~L~--d~~~~vR~~A~~~L~~~~--~~---------~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~-   85 (276)
T d1oyza_          20 NDDELFRLLD--DHNSLKRISSARVLQLRG--GQ---------DAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCED-   85 (276)
T ss_dssp             CHHHHHHHTT--CSSHHHHHHHHHHHHHHC--CH---------HHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTHH-
T ss_pred             CHHHHHHHhc--CCCHHHHHHHHHHHHhhC--CH---------hHHHHHHHHHcCCCHHHHHHHHHHHHHhcccccccc-
Confidence            3456778887  467899999999987653  21         357899999988777888889999998865432211 


Q ss_pred             hhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHH
Q 010019          298 ASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARI  377 (520)
Q Consensus       298 ~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~  377 (520)
                                    ..++.|...+-+.+++.+...++.+|+.+........    ...++.+...+.+    .+..+...
T Consensus        86 --------------~~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~----~~~~~~l~~~~~d----~~~~vr~~  143 (276)
T d1oyza_          86 --------------NVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYS----PKIVEQSQITAFD----KSTNVRRA  143 (276)
T ss_dssp             --------------HHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGH----HHHHHHHHHHTTC----SCHHHHHH
T ss_pred             --------------chHHHHHHHHhcCCChhHHHHHHHHHHHHccccchhh----HHHHHHHHHHhcC----cchHHHHH
Confidence                          1245566666555677888999999998874322111    1122344444433    23577777


Q ss_pred             HHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHH-----------------
Q 010019          378 CCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAM-----------------  440 (520)
Q Consensus       378 al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~-----------------  440 (520)
                      ++.+++.+.          +...++.+..++.  ..+..+...+..++..+....+.....+.                 
T Consensus       144 a~~~l~~~~----------~~~~~~~l~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  211 (276)
T d1oyza_         144 TAFAISVIN----------DKATIPLLINLLK--DPNGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIG  211 (276)
T ss_dssp             HHHHHHTC-------------CCHHHHHHHHT--CSSHHHHHHHHHHHHHHTCCCHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred             HHHHHhhcc----------hHHHHHHHHHhcc--cccchhhhhHHHHHHhhhccccccchhhhhhhhhhhhhhhhhhccc
Confidence            777766543          2244566666665  44566666666666555543332221111                 


Q ss_pred             -----hcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHhCCHHHHHHHHHHhCc
Q 010019          441 -----EAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLSNGVEKLIRQAKENHE  500 (520)
Q Consensus       441 -----~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~~G~~~lL~~~~~~h~  500 (520)
                           ....++.|++.+..    +.+...|+++|..+.  ++         ++.+.|..++..+.
T Consensus       212 l~~~~~~~~~~~L~~~l~d----~~vr~~a~~aL~~ig--~~---------~~~~~L~~~l~~~~  261 (276)
T d1oyza_         212 LSYRKDKRVLSVLCDELKK----NTVYDDIIEAAGELG--DK---------TLLPVLDTMLYKFD  261 (276)
T ss_dssp             HHHTTCGGGHHHHHHHHTS----SSCCHHHHHHHHHHC--CG---------GGHHHHHHHHTTSS
T ss_pred             cchhhhhhhHHHHHHHhCC----hHHHHHHHHHHHHcC--CH---------HHHHHHHHHHccCC
Confidence                 12246666666642    235667777777662  22         35566666665543


No 20 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.96  E-value=0.0082  Score=62.42  Aligned_cols=299  Identities=11%  Similarity=0.084  Sum_probs=173.5

Q ss_pred             HHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHH
Q 010019          123 SLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMAL  202 (520)
Q Consensus       123 ~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~  202 (520)
                      ++..|+.-+.+       +++....-|++.|..+..    ++-..     -.++.+..++.+.+ .++-+...|+.++..
T Consensus       104 ~iNtl~KDL~s-------~n~~ir~lALr~L~~i~~----~~i~~-----~l~~~V~k~l~~~d-~~p~VRk~A~l~l~k  166 (584)
T d2vgla_         104 INNAIKNDLAS-------RNPTFMGLALHCIANVGS----REMAE-----AFAGEIPKILVAGD-TMDSVKQSAALCLLR  166 (584)
T ss_dssp             HHHHHHHHHHS-------CCHHHHHHHHHHHHHHCC----HHHHH-----HHTTHHHHHHHCSS-SCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCC-------CCHHHHHHHHHHHHcCCC----HHHHH-----HHHHHHHHhhccCC-CcHHHHHHHHHHHHH
Confidence            45556666655       455555555555555443    22111     12444555555432 356677777777776


Q ss_pred             hhcccccchhHH-hcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCCh------
Q 010019          203 LVHDVQSTETFR-TGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRN------  275 (520)
Q Consensus       203 l~~~~~~~~~i~-~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~------  275 (520)
                      +....   ++.. ..+.++.+.++|.  ..++.+...++.++..++..++.....+.. ..++.|..++.....      
T Consensus       167 i~~~~---pd~~~~~~~~~~L~~lL~--D~d~~V~~aAl~ll~eI~~~~p~~~~~~~~-~~i~~L~~ll~~~~~~~~~~~  240 (584)
T d2vgla_         167 LYRTS---PDLVPMGDWTSRVVHLLN--DQHLGVVTAATSLITTLAQKNPEEFKTSVS-LAVSRLSRIVTSASTDLQDYT  240 (584)
T ss_dssp             HHHHC---GGGCCCCSCHHHHHHHTT--CSCHHHHHHHHHHHHHHHHHCHHHHTTHHH-HHHHHHHHHHHCCSSSCSTTE
T ss_pred             HHHhC---hhhhhhhhHHHHHHHHhc--CCChhHHHHHHHHHHHHHHhCHHHHHHHHH-HHHHHHHHHHhhcccchHHHH
Confidence            65433   2333 3456888999986  457889999999999988655443222221 344455555443211      


Q ss_pred             -------HHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCC----------hhHHHHHHHHHH
Q 010019          276 -------DSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLS----------SPSLISASIALK  338 (520)
Q Consensus       276 -------~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~----------~~~~~~a~~aL~  338 (520)
                             -.+......+..+...++...        ...+.+  .+..++.-+.....          ..+.-+++.++.
T Consensus       241 ~~~~~~~~lq~~il~ll~~l~~~~~~~~--------~~~l~~--~l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~  310 (584)
T d2vgla_         241 YYFVPAPWLSVKLLRLLQCYPPPEDPAV--------RGRLTE--CLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLII  310 (584)
T ss_dssp             ETTEESHHHHHHHHHHGGGSSSCSSHHH--------HHHHHH--HHHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhcccHHHHHHHHHHHHHhCCcccHHH--------HHHHHH--HHHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHH
Confidence                   223334555555555443322        111211  12333332222211          123334555555


Q ss_pred             HhccChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHH
Q 010019          339 AVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVL  418 (520)
Q Consensus       339 ~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~  418 (520)
                      .+...++....     +++.+..+|.+    .+..+.-.++..|..|+........+..  -...++..+.. .+++.++
T Consensus       311 ~~~~~~~~~~~-----~i~~l~~lL~s----~~~niry~aL~~L~~L~~~~~~~~~~~~--~~~~il~~l~~-~~~~~Ir  378 (584)
T d2vgla_         311 HHDSEPNLLVR-----ACNQLGQFLQH----RETNLRYLALESMCTLASSEFSHEAVKT--HIETVINALKT-ERDVSVR  378 (584)
T ss_dssp             HHCCCHHHHHH-----HHHHHHHHSSC----SCHHHHHHHHHHHHHHTTCTTTHHHHHT--THHHHHHHHTT-CCCHHHH
T ss_pred             hcCCCHHHHHH-----HHHHHHHHhcC----CCcchHHHHHHHHHHHHccCCCHHHHHH--HHHHHHHhccc-CchhHHH
Confidence            55444333322     34677777764    2358999999999999977655544443  46667776652 4578999


Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhh
Q 010019          419 QEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVAR  475 (520)
Q Consensus       419 ~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~  475 (520)
                      ..++..|..|+  +++|...+     ++.+...+..  .+..+++++..+|..++.+
T Consensus       379 ~~aL~lL~~L~--n~~Ni~~I-----v~eL~~yl~~--~d~~~k~~~i~~I~~la~k  426 (584)
T d2vgla_         379 QRAVDLLYAMC--DRSNAQQI-----VAEMLSYLET--ADYSIREEIVLKVAILAEK  426 (584)
T ss_dssp             HHHHHHHHHHC--CHHHHHHH-----HHHHHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhC--CHHHHHHH-----HHHHHHHHhh--CCHHHHHHHHHHHHHHHHH
Confidence            99999999998  56887766     4556667765  5788999999999999864


No 21 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.67  E-value=5.7e-05  Score=85.29  Aligned_cols=349  Identities=13%  Similarity=0.119  Sum_probs=180.1

Q ss_pred             HHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHhh
Q 010019          125 ERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLV  204 (520)
Q Consensus       125 ~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l~  204 (520)
                      ..|-+++.+       .|++...-|+..|....+..  ...-..-.....++.|+++|...   +++++..|++.|+.+.
T Consensus         6 ~~ll~k~~~-------~D~d~R~ma~~dl~~~l~~~--~~~~~~~~~~~i~~~ll~~L~D~---~~~Vq~~A~k~l~~l~   73 (1207)
T d1u6gc_           6 SNLLEKMTS-------SDKDFRFMATNDLMTELQKD--SIKLDDDSERKVVKMILKLLEDK---NGEVQNLAVKCLGPLV   73 (1207)
T ss_dssp             HHHHHHTTC-------SSHHHHHHHHHHHHHHTSSS--CCSCCTTHHHHHHHHHHHHTTCS---SHHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCC-------CCHhHHHHHHHHHHHHHhhc--ccccChHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHH
Confidence            344445555       78888888999998877641  11101011123678899988753   7889988888888876


Q ss_pred             cccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCCh-hh--H--HHHHhcCCHHHHHHHHhcCCh-HHH
Q 010019          205 HDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNE-VV--K--ESYMELKIDELILEILSRQRN-DSI  278 (520)
Q Consensus       205 ~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e-~n--r--~~i~~~g~i~~Lv~lL~~~~~-~~~  278 (520)
                      ..-.  ...+ ...++.|+..|.+  ++.+....+..+|..+...-. ..  .  ....-...++.+...+....+ .+.
T Consensus        74 ~~~~--~~~~-~~l~~~L~~~l~~--~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~  148 (1207)
T d1u6gc_          74 SKVK--EYQV-ETIVDTLCTNMLS--DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQ  148 (1207)
T ss_dssp             TTSC--HHHH-HHHHHHHHHHTTC--SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHH
T ss_pred             HhCc--HhhH-HHHHHHHHHHhcC--CchhhhHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhcCCCCHHHH
Confidence            4321  1111 1223444444432  334444444444433321100 00  0  011111234445555544433 555


Q ss_pred             HHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccC--hhhHHHHHhcCCh
Q 010019          279 QSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVN--DEICKSVAENGGI  356 (520)
Q Consensus       279 ~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~--~e~~~~i~~~Ggv  356 (520)
                      ..++.+|..+........     ..+.     ...++.|+..|.+ ++..+.+.++.+|+.|+..  ++...     ..+
T Consensus       149 ~~al~~l~~l~~~~g~~l-----~~~~-----~~il~~l~~~l~~-~~~~vR~~A~~~l~~l~~~~~~~~~~-----~~~  212 (1207)
T d1u6gc_         149 LEALDIMADMLSRQGGLL-----VNFH-----PSILTCLLPQLTS-PRLAVRKRTIIALGHLVMSCGNIVFV-----DLI  212 (1207)
T ss_dssp             HHHHHHHHHHHHHTCSSC-----TTTH-----HHHHHHHGGGGGC-SSHHHHHHHHHHHHHHTTTC----CT-----THH
T ss_pred             HHHHHHHHHHHHHhhHhh-----HHHH-----HHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHCCHHHHH-----HHH
Confidence            667777776653211100     0000     1134555555554 3467888899999999742  22111     235


Q ss_pred             HHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHh--cCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHH
Q 010019          357 DALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIE--NGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPE  434 (520)
Q Consensus       357 ~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~--~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~  434 (520)
                      +.++..+..+...   .+...++.+|+.|+.....+  +..  ...++.++..+.  .+++.+++.++.++..++...++
T Consensus       213 ~~ll~~l~~~~~~---~~~~~~~~~l~~l~~~~~~~--~~~~l~~i~~~l~~~l~--~~~~~~r~~al~~l~~l~~~~~~  285 (1207)
T d1u6gc_         213 EHLLSELSKNDSM---STTRTYIQCIAAISRQAGHR--IGEYLEKIIPLVVKFCN--VDDDELREYCIQAFESFVRRCPK  285 (1207)
T ss_dssp             HHHHHHHHHTCSS---CSCTTHHHHHHHHHHHSSGG--GTTSCTTHHHHHHHHHS--SCCTTTHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHccCCCH---HHHHHHHHHHHHHHHHcchh--hHHHHHHHHHHHHHHhc--CccHHHHHHHHHHHHHHHHhChh
Confidence            6677666543222   34455666666665321111  111  245788888887  67788999999999888765443


Q ss_pred             HH----HHHHhc-------------------------CcHH---HHHHHH--HhCCCCHHHHHHHHHHHHHHhhhChhhH
Q 010019          435 NA----ARAMEA-------------------------GSGD---LAIQAM--LKFPNAQQLQRSSCFMIRNLVARNPENR  480 (520)
Q Consensus       435 ~~----~~i~~~-------------------------G~i~---~lv~~L--~~~~~~~~vqk~A~~aL~nL~~~~~e~~  480 (520)
                      ..    ..++..                         ...+   .....+  ........+.+.|+.+|..+....++..
T Consensus       286 ~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~~~~l  365 (1207)
T d1u6gc_         286 EVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEML  365 (1207)
T ss_dssp             CCHHHHHHHHHHHTTCCCCC------------------------------------CTTHHHHHHHHHHHHHHTTCCTTH
T ss_pred             hhhhhHHHHHHHHHHHHhcCcchhhhhHHHHHhhhhhhccchhhhhHHHHHhhhhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence            11    111100                         0000   000000  0011345788889999999987777777


Q ss_pred             HHHHhCCHHHHHHHHHHhCcchHHHHHHHHHHc
Q 010019          481 KLLLSNGVEKLIRQAKENHEICKDAATDALRDL  513 (520)
Q Consensus       481 ~~l~~~G~~~lL~~~~~~h~~~~~~a~aALr~L  513 (520)
                      ..+.+.-+..++......++.++..+..++..+
T Consensus       366 ~~~~~~~~~~L~~~l~d~~~~vr~~~~~~l~~l  398 (1207)
T d1u6gc_         366 PEFYKTVSPALISRFKEREENVKADVFHAYLSL  398 (1207)
T ss_dssp             HHHHTTTHHHHHSTTSCSSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            766665444444333222345566666655544


No 22 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61  E-value=0.0023  Score=62.63  Aligned_cols=285  Identities=9%  Similarity=-0.001  Sum_probs=149.0

Q ss_pred             HHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHh
Q 010019          124 LERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALL  203 (520)
Q Consensus       124 l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l  203 (520)
                      +..|...+.+.     ..+......++..+..++..  .......-.-...++.++..+.+.+ .+..+...|++.+..+
T Consensus       129 ~~~l~~~l~~~-----~~~~~~~~~~l~~l~~~~~~--~~~~~~~~~~~~il~~~~~~l~~~~-~~~~v~~~a~~~l~~~  200 (458)
T d1ibrb_         129 IPQLVANVTNP-----NSTEHMKESTLEAIGYICQD--IDPEQLQDKSNEILTAIIQGMRKEE-PSNNVKLAATNALLNS  200 (458)
T ss_dssp             HHHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHH--SCGGGTGGGHHHHHHHHHHHHSTTC-CCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhh-----cchHHHHHHHHHHHHHHHhh--ccchhhhhhHHHHHHHHHHHhcccc-cCHHHHHHHHHHHHHH
Confidence            44555555441     13334444556666665542  1111111112334677777776542 3557788888888777


Q ss_pred             hcccccc--hhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHH
Q 010019          204 VHDVQST--ETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSIQSL  281 (520)
Q Consensus       204 ~~~~~~~--~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a  281 (520)
                      .......  .........+.+..++.  +.++++...++.++..++......-...+.....+.+...+.+..+++...+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a  278 (458)
T d1ibrb_         201 LEFTKANFDKESERHFIMQVVCEATQ--CPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQG  278 (458)
T ss_dssp             TTTTHHHHTSHHHHHHHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHH
T ss_pred             HHhhhhhhhhHHHHHHhHhhHHHHhc--CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence            6322100  00111112333444443  4578898899999988875433221111222233444555555555777778


Q ss_pred             HHHHHHhcCCCC------------cchhhhhhchHHHHHHHcCCHHHHHHHHhcCC------ChhHHHHHHHHHHHhcc-
Q 010019          282 YDAIRVLLTPDD------------DQVVASQVYGYARRFAKIGIARALVHSLHAGL------SSPSLISASIALKAVAV-  342 (520)
Q Consensus       282 ~~aL~~Ls~~dd------------~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~------~~~~~~~a~~aL~~La~-  342 (520)
                      +..+..++....            ...+........+... ...++.+.+.+....      +..+...+..++..++. 
T Consensus       279 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~  357 (458)
T d1ibrb_         279 IEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGAL-QYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATC  357 (458)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHH-HHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHH-HHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHh
Confidence            877777652110            0000000001111222 123455556554321      12355667777777762 


Q ss_pred             ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCC--chHHHHHhcCCHHHHHHHHhccCCCHHHHHH
Q 010019          343 NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSD--SNKSAIIENGGMDKLIVVSARFSDDASVLQE  420 (520)
Q Consensus       343 ~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~--~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~  420 (520)
                      ..+.        .++.++..+.....++++.++..++.+|+.++...  +.....+ ...++.|+..++  .+++.|+..
T Consensus       358 ~~~~--------~~~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l-~~i~~~l~~~l~--d~~~~VR~~  426 (458)
T d1ibrb_         358 CEDD--------IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMK--DPSVVVRDT  426 (458)
T ss_dssp             TTTT--------HHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTT-TTHHHHHHHGGG--CSCHHHHHH
T ss_pred             ccHh--------hhhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHHH-HHHHHHHHHHhC--CCCHHHHHH
Confidence            1111        13445555544333345789999999999998432  2111122 246788888887  678999999


Q ss_pred             HHHHHHHHhc
Q 010019          421 VMSIITVLSL  430 (520)
Q Consensus       421 a~~aL~nLa~  430 (520)
                      ||++|..++.
T Consensus       427 a~~~l~~i~~  436 (458)
T d1ibrb_         427 AAWTVGRICE  436 (458)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999874


No 23 
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.60  E-value=0.008  Score=60.23  Aligned_cols=231  Identities=10%  Similarity=0.038  Sum_probs=151.8

Q ss_pred             CCChHHHHHHHHHHHHHhcCChhhHHHHHhc--CCHHHHHHHHhcC-C-------------h---HHHHHHHHHHHHhcC
Q 010019          230 NEDPEILNSGFAVVAASATGNEVVKESYMEL--KIDELILEILSRQ-R-------------N---DSIQSLYDAIRVLLT  290 (520)
Q Consensus       230 ~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~--g~i~~Lv~lL~~~-~-------------~---~~~~~a~~aL~~Ls~  290 (520)
                      +++.+.+..|+.++..+.. .+..|..|++.  ..+++|+++|+.. +             .   ..+=.++-+++-|++
T Consensus       176 ~~~~~~~~i~v~~lq~llr-~~~~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~~~~~~~~~~Ql~Y~~ll~lWlLSF  254 (477)
T d1ho8a_         176 IEQMDTCYVCIRLLQELAV-IPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVATNSNHLGIQLQYHSLLLIWLLTF  254 (477)
T ss_dssp             TTCHHHHHHHHHHHHHHHT-SHHHHHHHHTTHHHHHHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHTT
T ss_pred             ccccchHHHHHHHHHHHhc-CccHHHHHHHcccchHHHHHHHHHHHhcccccchhhcccCCCccHHHHHHHHHHHHHHHc
Confidence            4567777788888887754 57789998743  4688888888652 0             0   223347778888888


Q ss_pred             CCCcchhhhhhchHHHHHHHc--CCHHHHHHHHhcCCChhHHHHHHHHHHHhccChh------hHHHHHhcCChHHHHHH
Q 010019          291 PDDDQVVASQVYGYARRFAKI--GIARALVHSLHAGLSSPSLISASIALKAVAVNDE------ICKSVAENGGIDALLRC  362 (520)
Q Consensus       291 ~dd~~v~~~~a~~~a~~i~~~--g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e------~~~~i~~~Ggv~~Ll~l  362 (520)
                      +.+.          +..+.+.  +.++.|+++++..+...+.+-++.+|.||.....      ....++..++++ ++..
T Consensus       255 ~~~~----------~~~l~~~~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~~v~~~~l~-~l~~  323 (477)
T d1ho8a_         255 NPVF----------ANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQLLLLGNALP-TVQS  323 (477)
T ss_dssp             SHHH----------HHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHHHHHHCHHH-HHHH
T ss_pred             CHHH----------HHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHcchhH-HHHH
Confidence            6532          2244443  3488999999887666677888889999984321      233455555554 4555


Q ss_pred             HhccCCCCcHHHHHHHHHHH-------HHhhCCCchHHHHHh--------------------------cCCHHHHHHHHh
Q 010019          363 IDDSGLQGNKTVARICCSLL-------SKLAGSDSNKSAIIE--------------------------NGGMDKLIVVSA  409 (520)
Q Consensus       363 L~~~~~~~~~~v~~~al~aL-------~~La~~~~~k~~Iv~--------------------------~g~l~~Lv~lL~  409 (520)
                      |.... -.|.++.+..-.+-       ..|++.|+-+..+-.                          ...+..|+++|.
T Consensus       324 L~~r~-~~Dedl~edl~~L~~~L~~~~k~lTsfd~Y~~Ev~Sg~L~WSP~H~se~FW~EN~~kf~e~~~~llk~L~~lL~  402 (477)
T d1ho8a_         324 LSERK-YSDEELRQDISNLKEILENEYQELTSFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQ  402 (477)
T ss_dssp             HHSSC-CSSHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHH
T ss_pred             HhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHhcCCCCCCCCcCChhHHHHHHHhhcccchHHHHHHHHHHh
Confidence            54321 12345544332221       222222333322211                          123788899986


Q ss_pred             c--------cCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhh
Q 010019          410 R--------FSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVAR  475 (520)
Q Consensus       410 ~--------~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~  475 (520)
                      .        .+.++.+..-||-=|..++...|.-+..+-+.|+=..++++| .| .+++|+++|-.++.-+..+
T Consensus       403 ~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~gr~il~~lg~K~~vM~Lm-~h-~d~~Vr~eAL~avQklm~~  474 (477)
T d1ho8a_         403 AKVRNGDVNAKQEKIIIQVALNDITHVVELLPESIDVLDKTGGKADIMELL-NH-SDSRVKYEALKATQAIIGY  474 (477)
T ss_dssp             HHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHSHHHHHHHHT-SC-SSHHHHHHHHHHHHHHHHH
T ss_pred             hcccccccccCCCcceeehhhhhHHHHHHHCcchhHHHHHcCcHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHh
Confidence            3        234788888999999999998998888888889988888888 45 5899999999998877544


No 24 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.48  E-value=0.017  Score=61.19  Aligned_cols=326  Identities=10%  Similarity=0.045  Sum_probs=174.2

Q ss_pred             HHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHH
Q 010019          123 SLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKTMAL  202 (520)
Q Consensus       123 ~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~  202 (520)
                      .+..|.+.+.+.     +........++..|..+|+.  -......-.-...++.++..+.+.+ .+..+...++.++..
T Consensus       129 li~~L~~~l~~~-----~~~~~~~~~~l~~l~~i~~~--~~~~~~~~~~~~il~~i~~~l~~~~-~~~~v~~~a~~~l~~  200 (876)
T d1qgra_         129 LIPQLVANVTNP-----NSTEHMKESTLEAIGYICQD--IDPEQLQDKSNEILTAIIQGMRKEE-PSNNVKLAATNALLN  200 (876)
T ss_dssp             HHHHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHH--SCHHHHGGGHHHHHHHHHHHHSTTC-SCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCC-----CCcHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHcCcC-ccHHHHHHHHHHHHH
Confidence            355555555441     12234445677777777763  1111111111345778888776542 355777778888776


Q ss_pred             hhcccccchhHHhcC----CcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHH
Q 010019          203 LVHDVQSTETFRTGG----GPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELILEILSRQRNDSI  278 (520)
Q Consensus       203 l~~~~~~~~~i~~~g----gi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~  278 (520)
                      ......  ..+....    .++.+...+.  ..++++...++.++..++......-...+.....+.+...+.....++.
T Consensus       201 ~~~~~~--~~~~~~~~~~~i~~~l~~~~~--~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  276 (876)
T d1qgra_         201 SLEFTK--ANFDKESERHFIMQVVCEATQ--CPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVA  276 (876)
T ss_dssp             HGGGCH--HHHTSHHHHHHHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHH
T ss_pred             HHHHhh--hhhhHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence            653211  1111011    1233333333  4578888899999888876554433333444455566666666555666


Q ss_pred             HHHHHHHHHhcCCCCcch------------hhhhhchHHHHHHHcCCHHHHHHHHhcCCC------hhHHHHHHHHHHHh
Q 010019          279 QSLYDAIRVLLTPDDDQV------------VASQVYGYARRFAKIGIARALVHSLHAGLS------SPSLISASIALKAV  340 (520)
Q Consensus       279 ~~a~~aL~~Ls~~dd~~v------------~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~------~~~~~~a~~aL~~L  340 (520)
                      ..++..+..++.......            +........+.+ ....++.+...+....+      ..+...+..+|..+
T Consensus       277 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l  355 (876)
T d1qgra_         277 LQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGA-LQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLL  355 (876)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHH-HHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHH-HHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHH
Confidence            666655555542110000            000000011111 11234555555543211      13455566666666


Q ss_pred             ccChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchH--HHHHhcCCHHHHHHHHhccCCCHHHH
Q 010019          341 AVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNK--SAIIENGGMDKLIVVSARFSDDASVL  418 (520)
Q Consensus       341 a~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k--~~Iv~~g~l~~Lv~lL~~~~~~~~v~  418 (520)
                      +..       ....+++.++..+.......+......++.+++.++......  .... ...++.++..+.  ..++.|+
T Consensus       356 ~~~-------~~~~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~l~--d~~~~vr  425 (876)
T d1qgra_         356 ATC-------CEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMK--DPSVVVR  425 (876)
T ss_dssp             HHH-------HGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHT--CSSHHHH
T ss_pred             HHH-------hhhhhhhhhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHH-HHHHHHHHHhhc--CCccHHH
Confidence            521       122345677777766544455678888888888887543222  2222 246788888887  6789999


Q ss_pred             HHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHH-HhCCCCHHHHHHHHHHHHHHhh
Q 010019          419 QEVMSIITVLSLRSPENAARAMEAGSGDLAIQAM-LKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       419 ~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L-~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      ..+++++..++...+..   ......++.++..+ ..-.+++.++..+||++.+++.
T Consensus       426 ~~a~~~l~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~l~~l~~  479 (876)
T d1qgra_         426 DTAAWTVGRICELLPEA---AINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAE  479 (876)
T ss_dssp             HHHHHHHHHHHHHCGGG---TSSTTTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcchh---hhhHHHhhhHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence            99999999988533221   11112233333332 2233578899999999999864


No 25 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.33  E-value=0.04  Score=57.94  Aligned_cols=371  Identities=13%  Similarity=0.116  Sum_probs=189.7

Q ss_pred             hhhHHHHHHHHHHHHhhcCCChhHHHHHHHHHH--hhcCcccCCccccCCCCCCCCCCcHHHHHHHHHHHhhcCCCCCCh
Q 010019           63 TISQEAFDEVVKENMEDLGMEPTEALQDAIQTL--SLQGVDLSGIVKCVPGESSLKDNPLIQSLERLKQLDLNSKDKFSD  140 (520)
Q Consensus        63 ~isQetfDe~V~eni~~~~m~p~eal~~aI~qf--~~qgvdls~i~~~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~~~~  140 (520)
                      .|+++.... +|+.+-..=-+++.-+|..+.+.  ..-..|++             ...-...+..|...+.+.      
T Consensus        87 ~i~~~~~~~-ik~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p-------------~~~wpeli~~L~~~~~s~------  146 (861)
T d2bpta1          87 QVSPEAKNQ-IKTNALTALVSIEPRIANAAAQLIAAIADIELP-------------HGAWPELMKIMVDNTGAE------  146 (861)
T ss_dssp             HSCHHHHHH-HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGG-------------GTCCHHHHHHHHHHTSTT------
T ss_pred             cCCHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCC-------------cCchHHHHHHHHHHhcCC------
Confidence            455555544 34444333346777777776663  11112221             011135677787777652      


Q ss_pred             hhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHH---HhhcccCcHHHHHHHHHHHHHhhcccccc--hhHHh
Q 010019          141 EDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSI---CYKMRCGSKRVLDSCLKTMALLVHDVQST--ETFRT  215 (520)
Q Consensus       141 ~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~l---L~~~~~~~~~~~~~al~~La~l~~~~~~~--~~i~~  215 (520)
                      .+......++..|..+|... ++.....  -....+.|..+   +.+. ..+..+...++..+..+...-...  .....
T Consensus       147 ~~~~~~~~al~~l~~i~e~~-~~~~~~~--~~~~~~il~~i~~~~~~~-~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~  222 (861)
T d2bpta1         147 QPENVKRASLLALGYMCESA-DPQSQAL--VSSSNNILIAIVQGAQST-ETSKAVRLAALNALADSLIFIKNNMEREGER  222 (861)
T ss_dssp             SCHHHHHHHHHHHHHHHHTS-STTSSTT--GGGHHHHHHHHHHHHSTT-CCCHHHHHHHHHHHHHHGGGCHHHHTSHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHh-hHHHHHH--HHHHHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHhHhHHhhhhh
Confidence            23344456788888888641 1111111  11222333333   3332 235677778888887765322110  00111


Q ss_pred             cCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHHHHHhcCCHHHH-HHHHhcCChHHHHHHHHHHHHhcCCCCc
Q 010019          216 GGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKESYMELKIDELI-LEILSRQRNDSIQSLYDAIRVLLTPDDD  294 (520)
Q Consensus       216 ~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~g~i~~L-v~lL~~~~~~~~~~a~~aL~~Ls~~dd~  294 (520)
                      ...++.+.+.+.  ..+.++...++.++..++......-...+.. .+..+ ....++..+++...++..+..++.....
T Consensus       223 ~~~~~~l~~~~~--~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~-~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~  299 (861)
T d2bpta1         223 NYLMQVVCEATQ--AEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQ-ALYALTIATMKSPNDKVASMTVEFWSTICEEEID  299 (861)
T ss_dssp             HHHHHHHHHHHT--CSCHHHHHHHHHHHHHHHHHHGGGCHHHHHH-THHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHhHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence            123455556665  4578888889999888775433322222221 23333 3333333446666677766665532110


Q ss_pred             chhh--------hhhchHHHHHHHcCCHHHHHHHHhcCCC------hhHHHHHHHHHHHhccChhhHHHHHhcCChHHHH
Q 010019          295 QVVA--------SQVYGYARRFAKIGIARALVHSLHAGLS------SPSLISASIALKAVAVNDEICKSVAENGGIDALL  360 (520)
Q Consensus       295 ~v~~--------~~a~~~a~~i~~~g~l~~Lv~lL~~~~~------~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll  360 (520)
                      ....        ...+........ ..++.+...+....+      ......+..+|..++...       ....++.+.
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~l~-~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~  371 (861)
T d2bpta1         300 IAYELAQFPQSPLQSYNFALSSIK-DVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNC-------GNHILEPVL  371 (861)
T ss_dssp             HHHHHHHCTTCSCCCCCHHHHHHH-HHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHH-------GGGGHHHHH
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhc-------chhhhhhhc
Confidence            0000        000111111111 235666666654321      134455566666665221       112345555


Q ss_pred             HHHhccCCCCcHHHHHHHHHHHHHhhCCCch--HHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 010019          361 RCIDDSGLQGNKTVARICCSLLSKLAGSDSN--KSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAAR  438 (520)
Q Consensus       361 ~lL~~~~~~~~~~v~~~al~aL~~La~~~~~--k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~  438 (520)
                      ..+.......+......++.+++.++.....  .....+ ..++.++..+.  ..++.|++.+++++..++...+.   .
T Consensus       372 ~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~-~~l~~l~~~l~--d~~~~vr~~a~~~l~~l~~~~~~---~  445 (861)
T d2bpta1         372 EFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMN--DQSLQVKETTAWCIGRIADSVAE---S  445 (861)
T ss_dssp             HHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGG--CSCHHHHHHHHHHHHHHHHHHGG---G
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHHhc--CcchhhhhHHHHHHHHHHHHhch---h
Confidence            5554443444568888999999998854322  222222 35778888887  67899999999999988742111   1


Q ss_pred             HHhcCcHHHHHHH-HHhCCCCHHHHHHHHHHHHHHhh
Q 010019          439 AMEAGSGDLAIQA-MLKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       439 i~~~G~i~~lv~~-L~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      +......+.++.. +....+++.++..+|+++.++..
T Consensus       446 ~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~l~~  482 (861)
T d2bpta1         446 IDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVE  482 (861)
T ss_dssp             SCTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred             hhhHHhhhhhhHHHHhccccChHHHHHHHHHHHHHHH
Confidence            1112223333332 22234578899999999998864


No 26 
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.31  E-value=0.012  Score=61.01  Aligned_cols=273  Identities=8%  Similarity=0.035  Sum_probs=156.2

Q ss_pred             HHHHHHHHhhcccCcHHHHHHHHHHHHHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhH
Q 010019          175 VELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVK  254 (520)
Q Consensus       175 ip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr  254 (520)
                      +..+..-|++   .++.+...||++|+++..     +++.. ...+.+.++|.....++-+...|+.++..+...+++  
T Consensus       105 iNtl~KDL~s---~n~~ir~lALr~L~~i~~-----~~i~~-~l~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd--  173 (584)
T d2vgla_         105 NNAIKNDLAS---RNPTFMGLALHCIANVGS-----REMAE-AFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPD--  173 (584)
T ss_dssp             HHHHHHHHHS---CCHHHHHHHHHHHHHHCC-----HHHHH-HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGG--
T ss_pred             HHHHHHHcCC---CCHHHHHHHHHHHHcCCC-----HHHHH-HHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChh--
Confidence            4445555555   377888889999999863     23321 124556666665556788999999999888755443  


Q ss_pred             HHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCC---------
Q 010019          255 ESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGL---------  325 (520)
Q Consensus       255 ~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~---------  325 (520)
                       .+...+.++.|.++|...+..++.+|+.++..++..+...  +       +.+. ...++.|..++....         
T Consensus       174 -~~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~p~~--~-------~~~~-~~~i~~L~~ll~~~~~~~~~~~~~  242 (584)
T d2vgla_         174 -LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEE--F-------KTSV-SLAVSRLSRIVTSASTDLQDYTYY  242 (584)
T ss_dssp             -GCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHH--H-------TTHH-HHHHHHHHHHHHCCSSSCSTTEET
T ss_pred             -hhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHhCHHH--H-------HHHH-HHHHHHHHHHHhhcccchHHHHHh
Confidence             3344568999999998766688889999999888643110  0       0111 123444545544321         


Q ss_pred             ---ChhHHHHHHHHHHHhccC--hhhHHHHHhcCChHHHHHHHhccCCCC-------cHHHHHHHHHHHHHhhCCCchHH
Q 010019          326 ---SSPSLISASIALKAVAVN--DEICKSVAENGGIDALLRCIDDSGLQG-------NKTVARICCSLLSKLAGSDSNKS  393 (520)
Q Consensus       326 ---~~~~~~~a~~aL~~La~~--~e~~~~i~~~Ggv~~Ll~lL~~~~~~~-------~~~v~~~al~aL~~La~~~~~k~  393 (520)
                         ++-.+......+..+...  ++....+.+.  +..++.-+.......       ...+.-.++.++..+...+....
T Consensus       243 ~~~~~~lq~~il~ll~~l~~~~~~~~~~~l~~~--l~~Il~~~~~~~~~~~~~~~~~~~aVl~e~i~~i~~~~~~~~~~~  320 (584)
T d2vgla_         243 FVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTEC--LETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLV  320 (584)
T ss_dssp             TEESHHHHHHHHHHGGGSSSCSSHHHHHHHHHH--HHHHHHHHHSCCSCSSHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred             hcccHHHHHHHHHHHHHhCCcccHHHHHHHHHH--HHHHHHHhhhccccccHHhhhhHHHHHHHHHHHHHhcCCCHHHHH
Confidence               123344445555555432  2222222211  122222222111111       01344455555555433322221


Q ss_pred             HHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 010019          394 AIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLV  473 (520)
Q Consensus       394 ~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~  473 (520)
                           .+++.+..+|.  +.++.++..++..|..|+...+. .. ++.. -...++..+.. .++..+++.+...|.+++
T Consensus       321 -----~~i~~l~~lL~--s~~~niry~aL~~L~~L~~~~~~-~~-~~~~-~~~~il~~l~~-~~~~~Ir~~aL~lL~~L~  389 (584)
T d2vgla_         321 -----RACNQLGQFLQ--HRETNLRYLALESMCTLASSEFS-HE-AVKT-HIETVINALKT-ERDVSVRQRAVDLLYAMC  389 (584)
T ss_dssp             -----HHHHHHHHHSS--CSCHHHHHHHHHHHHHHTTCTTT-HH-HHHT-THHHHHHHHTT-CCCHHHHHHHHHHHHHHC
T ss_pred             -----HHHHHHHHHhc--CCCcchHHHHHHHHHHHHccCCC-HH-HHHH-HHHHHHHhccc-CchhHHHHHHHHHHHHhC
Confidence                 25678888887  67899999999999999865322 11 1111 34455555643 357789999999999985


Q ss_pred             hhChhhHHHHH
Q 010019          474 ARNPENRKLLL  484 (520)
Q Consensus       474 ~~~~e~~~~l~  484 (520)
                        ++++...++
T Consensus       390 --n~~Ni~~Iv  398 (584)
T d2vgla_         390 --DRSNAQQIV  398 (584)
T ss_dssp             --CHHHHHHHH
T ss_pred             --CHHHHHHHH
Confidence              566665554


No 27 
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.07  E-value=0.013  Score=56.99  Aligned_cols=257  Identities=11%  Similarity=0.041  Sum_probs=138.4

Q ss_pred             CcHHHHHHHHHHHHHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChhhHH-HHH--------
Q 010019          188 GSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEVVKE-SYM--------  258 (520)
Q Consensus       188 ~~~~~~~~al~~La~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~nr~-~i~--------  258 (520)
                      +|.+.+..|-+.|..+...+  .+.+     +..+..+|.+...+..+...|+-.+.+....+..... ...        
T Consensus        12 ~d~~~r~~A~~~L~~~~~~~--~~~~-----~~~l~~il~~~~~~~~~R~~A~i~lk~~l~~~~~~~~~~~~~~~~~l~~   84 (458)
T d1ibrb_          12 PDRLELEAAQKFLERAAVEN--LPTF-----LVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDA   84 (458)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH--HHHH-----HHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCH
T ss_pred             cCHHHHHHHHHHHHHHHhcC--chHH-----HHHHHHHHhcCCCCHHHHHHHHHHHHHHhhccCchhhhHHhhhhccCCH
Confidence            47777777777776665332  1333     4567777776555566766777677766544332211 110        


Q ss_pred             --hcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHH---cCCHHHHHHHHhcCC-ChhHHHH
Q 010019          259 --ELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAK---IGIARALVHSLHAGL-SSPSLIS  332 (520)
Q Consensus       259 --~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~---~g~l~~Lv~lL~~~~-~~~~~~~  332 (520)
                        ...+...+++.+.+.. ..++.++.++..++..+               +..   .+.++.|++.+.+.. +......
T Consensus        85 ~~~~~i~~~ll~~~~~~~-~~~~~~~~~~~~i~~~~---------------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  148 (458)
T d1ibrb_          85 NARREVKNYVLQTLGTET-YRPSSASQCVAGIACAE---------------IPVNQWPELIPQLVANVTNPNSTEHMKES  148 (458)
T ss_dssp             HHHHHHHHHHHHHTTCCC-SSSCSHHHHHHHHHHHH---------------GGGTCCTTHHHHHHHHHHCTTCCHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCc-HHHHHHHHHHHHHHHHh---------------CCcccCcchhHHHHHHHHhhcchHHHHHH
Confidence              1122333444444332 22223333333322211               111   246788888887654 3455566


Q ss_pred             HHHHHHHhcc-ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchH--HHHHhcCCHHHHHHHHh
Q 010019          333 ASIALKAVAV-NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNK--SAIIENGGMDKLIVVSA  409 (520)
Q Consensus       333 a~~aL~~La~-~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k--~~Iv~~g~l~~Lv~lL~  409 (520)
                      ++.+|..+.. .......-.-...++.++..+...  ..+.++...++.++..+.......  .........+.+..++.
T Consensus       149 ~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~--~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  226 (458)
T d1ibrb_         149 TLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKE--EPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQ  226 (458)
T ss_dssp             HHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTT--CCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhhccchhhhhhHHHHHHHHHHHhccc--ccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHHhc
Confidence            7777777652 111111111112245666666542  234589999999999887542211  11122223455666665


Q ss_pred             ccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Q 010019          410 RFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLV  473 (520)
Q Consensus       410 ~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~  473 (520)
                        ..++.++..++.+|..++...++.....+.......+...+.  +.+..+...|+..+..++
T Consensus       227 --~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~a~~~l~~i~  286 (458)
T d1ibrb_         227 --CPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMK--SDIDEVALQGIEFWSNVC  286 (458)
T ss_dssp             --CSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHH--CSSHHHHHHHHHHHHHHH
T ss_pred             --CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHH
Confidence              568999999999999998655543322222223344444443  357788888998888775


No 28 
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.74  E-value=0.033  Score=58.60  Aligned_cols=257  Identities=12%  Similarity=0.029  Sum_probs=134.5

Q ss_pred             cHHHHHHHHHHHHHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcC-----------------Ch
Q 010019          189 SKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATG-----------------NE  251 (520)
Q Consensus       189 ~~~~~~~al~~La~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~-----------------~e  251 (520)
                      |+.++..|-..|-.+...+  .+.+     +..+++++.+...+..+...|+-.+.+....                 .+
T Consensus        18 d~~~r~~Ae~~L~~~~~~~--~~~~-----~~~l~~il~~~~~~~~~r~~A~i~lkn~i~~~~~~~~~~~~~~~~~~i~~   90 (861)
T d2bpta1          18 DQNIRLTSETQLKKLSNDN--FLQF-----AGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSP   90 (861)
T ss_dssp             SHHHHHHHHHHHHHHHHHC--HHHH-----HHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CHHHHHHHHHHHHHHHhcC--chHH-----HHHHHHHHHcCCCCHHHHHHHHHHHHHHhhcccchhhhhHHhhhHhcCCH
Confidence            5555555555554443221  1111     3445555555444555555555555554332                 22


Q ss_pred             hhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHH
Q 010019          252 VVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLI  331 (520)
Q Consensus       252 ~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~  331 (520)
                      +.|..+     -..++..|.+....++..++.++..++..+-+..       .+     ...++.|++.+.+..+...+.
T Consensus        91 ~~~~~i-----k~~ll~~l~~~~~~vr~~~a~~i~~i~~~~~p~~-------~w-----peli~~L~~~~~s~~~~~~~~  153 (861)
T d2bpta1          91 EAKNQI-----KTNALTALVSIEPRIANAAAQLIAAIADIELPHG-------AW-----PELMKIMVDNTGAEQPENVKR  153 (861)
T ss_dssp             HHHHHH-----HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHGGGT-------CC-----HHHHHHHHHHTSTTSCHHHHH
T ss_pred             HHHHHH-----HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCcC-------ch-----HHHHHHHHHHhcCCCcHHHHH
Confidence            333333     2456677766555666667778877764321100       00     013667777776544445566


Q ss_pred             HHHHHHHHhccC-hhhHHHHHhcCChHHHHHHHhcc-CCCCcHHHHHHHHHHHHHhhCCCchH--HHHHhcCCHHHHHHH
Q 010019          332 SASIALKAVAVN-DEICKSVAENGGIDALLRCIDDS-GLQGNKTVARICCSLLSKLAGSDSNK--SAIIENGGMDKLIVV  407 (520)
Q Consensus       332 ~a~~aL~~La~~-~e~~~~i~~~Ggv~~Ll~lL~~~-~~~~~~~v~~~al~aL~~La~~~~~k--~~Iv~~g~l~~Lv~l  407 (520)
                      .++.+|..++.. +.....+. ....+.+..++... .+..+..+...++.+|.++...-...  ........++.+...
T Consensus       154 ~al~~l~~i~e~~~~~~~~~~-~~~~~il~~i~~~~~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  232 (861)
T d2bpta1         154 ASLLALGYMCESADPQSQALV-SSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEA  232 (861)
T ss_dssp             HHHHHHHHHHHTSSTTSSTTG-GGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHH-HHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHH
Confidence            677888887622 11111111 11112233333211 12234688899999999887432111  111112346677777


Q ss_pred             HhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 010019          408 SARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       408 L~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      ++  ..++.++..++.+|..++...++.....+.. .+..+..... ...++.+...++..+..++.
T Consensus       233 ~~--~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~-~l~~l~~~~~-~~~~~~v~~~~~~~l~~l~~  295 (861)
T d2bpta1         233 TQ--AEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQ-ALYALTIATM-KSPNDKVASMTVEFWSTICE  295 (861)
T ss_dssp             HT--CSCHHHHHHHHHHHHHHHHHHGGGCHHHHHH-THHHHHHHHT-TCSSHHHHHHHHHHHHHHHH
T ss_pred             hc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh-cCccHHHHHHHHHHHHHHHH
Confidence            77  6789999999999999986544433222221 1222222222 33577888888888877753


No 29 
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.49  E-value=0.064  Score=56.57  Aligned_cols=264  Identities=12%  Similarity=0.027  Sum_probs=148.5

Q ss_pred             HHHHhhcccCcHHHHHHHHHHHHHhhcccccchhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCC--------
Q 010019          179 CSICYKMRCGSKRVLDSCLKTMALLVHDVQSTETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGN--------  250 (520)
Q Consensus       179 v~lL~~~~~~~~~~~~~al~~La~l~~~~~~~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~--------  250 (520)
                      +++|...-.+|.+....|-..|..+...+  .+.+     +..|++++.+.+.+..+...|+-.+.+....+        
T Consensus         4 ~~~L~~~~s~d~~~r~~Ae~~L~~~~~~~--~~~f-----~~~L~~i~~~~~~~~~iR~~A~i~lKn~i~~~~~~~~~~~   76 (876)
T d1qgra_           4 ITILEKTVSPDRLELEAAQKFLERAAVEN--LPTF-----LVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQY   76 (876)
T ss_dssp             HHHHHGGGCSCHHHHHHHHHHHHHHHHHH--HHHH-----HHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHH
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHHHhcC--hhHH-----HHHHHHHHhcCCCCHHHHHHHHHHHHHHhhccccchhhhh
Confidence            34444332347777777777776654322  1222     46677777766556677777777777755433        


Q ss_pred             --------hhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHh
Q 010019          251 --------EVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLH  322 (520)
Q Consensus       251 --------e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~  322 (520)
                              ++.|..+     -..++..|.+.. ...+.++.++..++..+-+.-       .+     .+.++.|++.+.
T Consensus        77 ~~~~~~i~~~~k~~i-----k~~ll~~l~~~~-~~~~~~a~~i~~i~~~~~p~~-------~W-----peli~~L~~~l~  138 (876)
T d1qgra_          77 QQRWLAIDANARREV-----KNYVLHTLGTET-YRPSSASQCVAGIACAEIPVN-------QW-----PELIPQLVANVT  138 (876)
T ss_dssp             HHHHHTSCHHHHHHH-----HHHHHHHTTTCC-SSSCHHHHHHHHHHHHHGGGT-------CC-----TTHHHHHHHHHH
T ss_pred             hcccccCCHHHHHHH-----HHHHHHHhcCCc-HHHHHHHHHHHHHHHHHCCcc-------cc-----HHHHHHHHHHhc
Confidence                    2223222     235666665533 334445666666553221000       00     145888888887


Q ss_pred             cCCC-hhHHHHHHHHHHHhcc--ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHH--HHHh
Q 010019          323 AGLS-SPSLISASIALKAVAV--NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKS--AIIE  397 (520)
Q Consensus       323 ~~~~-~~~~~~a~~aL~~La~--~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~--~Iv~  397 (520)
                      +... ..++..++.+|..++.  ..+.-.... ...++.++..+...  ..+.++...++.++.++........  ....
T Consensus       139 ~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~-~~il~~i~~~l~~~--~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~  215 (876)
T d1qgra_         139 NPNSTEHMKESTLEAIGYICQDIDPEQLQDKS-NEILTAIIQGMRKE--EPSNNVKLAATNALLNSLEFTKANFDKESER  215 (876)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGH-HHHHHHHHHHHSTT--CSCHHHHHHHHHHHHHHGGGCHHHHTSHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHcCc--CccHHHHHHHHHHHHHHHHHhhhhhhHHHHH
Confidence            6442 4556677888888762  222111111 12345666766542  2345788888888887764321111  1111


Q ss_pred             cCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh
Q 010019          398 NGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA  474 (520)
Q Consensus       398 ~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~  474 (520)
                      .-.++.+...+.  ..++.++..++.+|..++...++.....+.......+...+.  .....+...+...+..++.
T Consensus       216 ~~i~~~l~~~~~--~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~i~~  288 (876)
T d1qgra_         216 HFIMQVVCEATQ--CPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMK--SDIDEVALQGIEFWSNVCD  288 (876)
T ss_dssp             HHHHHHHHHHTT--CSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHT--CSSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHH
Confidence            112445555555  568999999999999998766665544444444555555553  3577888888877777653


No 30 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=96.14  E-value=0.0036  Score=49.84  Aligned_cols=88  Identities=7%  Similarity=0.098  Sum_probs=65.1

Q ss_pred             CChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCH
Q 010019          354 GGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSP  433 (520)
Q Consensus       354 Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~  433 (520)
                      .+++.|+.+|.+    +++.+...++.+|+.+..          .+.++.|+.+|+  .+++.|+..++.+|..+.  ++
T Consensus        22 ~~~~~L~~~l~d----~~~~vR~~a~~~L~~~~~----------~~~~~~L~~~l~--d~~~~VR~~a~~aL~~i~--~~   83 (111)
T d1te4a_          22 EAFEPLLESLSN----EDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLE--DDSGFVRSGAARSLEQIG--GE   83 (111)
T ss_dssp             TTHHHHHHGGGC----SCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHH--HCCTHHHHHHHHHHHHHC--SH
T ss_pred             HHHHHHHHHHcC----CCHHHHHHHHHHHHhcch----------hhhHHHHHhhhc--cchhHHHHHHHHHHHHhC--cc
Confidence            357788888874    246899999999987642          235789999998  678999999999999875  22


Q ss_pred             HHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 010019          434 ENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIR  470 (520)
Q Consensus       434 ~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~  470 (520)
                               +.++.|..++. + .++.|++.|..+|.
T Consensus        84 ---------~~~~~L~~ll~-d-~~~~vr~~A~~aL~  109 (111)
T d1te4a_          84 ---------RVRAAMEKLAE-T-GTGFARKVAVNYLE  109 (111)
T ss_dssp             ---------HHHHHHHHHTT-S-CCTHHHHHHHHHGG
T ss_pred             ---------chHHHHHHHHc-C-CCHHHHHHHHHHHH
Confidence                     24566666664 3 47889888887763


No 31 
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=95.87  E-value=0.0064  Score=48.30  Aligned_cols=88  Identities=10%  Similarity=0.101  Sum_probs=66.8

Q ss_pred             CCHHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCch
Q 010019          312 GIARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSN  391 (520)
Q Consensus       312 g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~  391 (520)
                      .++++|+.+|.+ .++.+...++++|+++..          .+.++.|+.+|.+.    ++.|...++.+|+.+..    
T Consensus        22 ~~~~~L~~~l~d-~~~~vR~~a~~~L~~~~~----------~~~~~~L~~~l~d~----~~~VR~~a~~aL~~i~~----   82 (111)
T d1te4a_          22 EAFEPLLESLSN-EDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLEDD----SGFVRSGAARSLEQIGG----   82 (111)
T ss_dssp             TTHHHHHHGGGC-SCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHHHC----CTHHHHHHHHHHHHHCS----
T ss_pred             HHHHHHHHHHcC-CCHHHHHHHHHHHHhcch----------hhhHHHHHhhhccc----hhHHHHHHHHHHHHhCc----
Confidence            468899999875 467888999999887642          12468899999862    23899999999987632    


Q ss_pred             HHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHH
Q 010019          392 KSAIIENGGMDKLIVVSARFSDDASVLQEVMSIIT  426 (520)
Q Consensus       392 k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~  426 (520)
                            .+.++.|..+++  .+++.|++.|+.+|.
T Consensus        83 ------~~~~~~L~~ll~--d~~~~vr~~A~~aL~  109 (111)
T d1te4a_          83 ------ERVRAAMEKLAE--TGTGFARKVAVNYLE  109 (111)
T ss_dssp             ------HHHHHHHHHHTT--SCCTHHHHHHHHHGG
T ss_pred             ------cchHHHHHHHHc--CCCHHHHHHHHHHHH
Confidence                  245778888887  668999999988774


No 32 
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.13  E-value=0.096  Score=57.93  Aligned_cols=282  Identities=9%  Similarity=0.041  Sum_probs=142.4

Q ss_pred             HHHHHHHHhhcccCcHHHHHHHHHHHHHhhccccc--chhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHHHHhcCChh
Q 010019          175 VELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQS--TETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVAASATGNEV  252 (520)
Q Consensus       175 ip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~~--~~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~~~~~~~e~  252 (520)
                      ++.+...+++   .+..+...++..+..+....+.  .+.+  ...++.++..+........+...++..+..+...+..
T Consensus       433 ~~~l~~~l~~---~~~~~r~~~~~~l~~l~~~~~~~l~~~l--~~~~~~i~~~l~~~~~~~~~~~~al~~l~~l~~~~~~  507 (1207)
T d1u6gc_         433 VKALHKQMKE---KSVKTRQCCFNMLTELVNVLPGALTQHI--PVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSP  507 (1207)
T ss_dssp             HHHHHHHTTC---SCHHHHHHHHHHHHHHHHHSTTTTGGGH--HHHHHHHHHHTTCSSSCHHHHHHHHHHHHHHHHSSCG
T ss_pred             HHHHHHHhcC---CchhHHHHHHHHHHHHHHHcchHHHHhh--HhhHHHHHHHHhcccchhHHHHHHHHHHHHHHHhccH
Confidence            3344444443   2455555555655554422110  1111  1124455556654445566777788888777665543


Q ss_pred             hHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCC-ChhHHH
Q 010019          253 VKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGL-SSPSLI  331 (520)
Q Consensus       253 nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~-~~~~~~  331 (520)
                      ..-.-.-....+.++..+......+...+..++..+...-..... ....+....+.  ..++.++..+.... +.++..
T Consensus       508 ~~~~~~~~~l~~~~~~~~~~~~~~i~~~al~~~~~l~~~l~~~~~-~~~~~~~~~~~--~l~~~~~~~l~~~~~~~e~~~  584 (1207)
T d1u6gc_         508 QVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQ-PSSFDATPYIK--DLFTCTIKRLKAADIDQEVKE  584 (1207)
T ss_dssp             GGGHHHHTTTHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCCSSS-CCCCCCHHHHH--HHHHHHHHHHSCSSSCHHHHH
T ss_pred             HHHHHHHHhhhhhHHHHHccccHHHHHHHHHHHHHHHHHhhhhcc-chhhhhHHHHH--HHHHHHHHHHHhcccchHHHH
Confidence            322222345777888888765555555555554443321000000 00000111111  13556666666543 456777


Q ss_pred             HHHHHHHHhcc-Chhh-HHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCC---chHHHHHhcCCHHHHHH
Q 010019          332 SASIALKAVAV-NDEI-CKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSD---SNKSAIIENGGMDKLIV  406 (520)
Q Consensus       332 ~a~~aL~~La~-~~e~-~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~---~~k~~Iv~~g~l~~Lv~  406 (520)
                      .+..++..+.. ..+. ...+.  ..++.++..+..    .  .....++.++..++...   .... +.. ..++.+..
T Consensus       585 ~al~~l~~l~~~~~~~~~~~~~--~~l~~l~~~l~~----~--~~r~~a~~~l~~i~~~~~~~~~~~-~l~-~~~~~l~~  654 (1207)
T d1u6gc_         585 RAISCMGQIICNLGDNLGSDLP--NTLQIFLERLKN----E--ITRLTTVKALTLIAGSPLKIDLRP-VLG-EGVPILAS  654 (1207)
T ss_dssp             HHHHHHHHHHHHTGGGCCTHHH--HHHHHHHHHTTS----S--SHHHHHHHHHHHHTTCSSCCCCHH-HHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhHHHHH--HHHHHHHHHhcc----h--hhHHHHHHHHHHHHHhccchhHHH-HHH-HHHHHHHH
Confidence            77777776652 1111 11110  112333333332    1  35567788888887432   2222 222 35677777


Q ss_pred             HHhccCCCHHHHHHHHHHHHHHhcCCH-----HHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhChhhHH
Q 010019          407 VSARFSDDASVLQEVMSIITVLSLRSP-----ENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVARNPENRK  481 (520)
Q Consensus       407 lL~~~~~~~~v~~~a~~aL~nLa~~~~-----~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~  481 (520)
                      .++  ..+..++..++.+|..+....+     .....+     ++.+..++  ...+..++..+..++..++...++...
T Consensus       655 ~l~--~~~~~~r~~al~~L~~l~~~~~~~~~~~~~~~~-----l~~l~~ll--~~~d~~v~~~~l~~l~~l~~~~~~~~~  725 (1207)
T d1u6gc_         655 FLR--KNQRALKLGTLSALDILIKNYSDSLTAAMIDAV-----LDELPPLI--SESDMHVSQMAISFLTTLAKVYPSSLS  725 (1207)
T ss_dssp             HTT--SCCHHHHHHHHHHHHHHHHHCCTTCCHHHHHHH-----HTTCGGGS--CTTCHHHHHHHHHHHHHHTTSCGGGGG
T ss_pred             hcc--cchHHHHHHHHHHHHHHHHhccccchhHHHhhH-----HHhhcccc--ccccHHHHHHHHHHHHHHHhhcchhhh
Confidence            787  6788999999999988864321     111111     11122222  235677888888888888766665544


Q ss_pred             HH
Q 010019          482 LL  483 (520)
Q Consensus       482 ~l  483 (520)
                      .+
T Consensus       726 ~~  727 (1207)
T d1u6gc_         726 KI  727 (1207)
T ss_dssp             GT
T ss_pred             hH
Confidence            33


No 33 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.98  E-value=1.6  Score=41.31  Aligned_cols=149  Identities=11%  Similarity=0.165  Sum_probs=98.4

Q ss_pred             hhHHHHHhcCChHHHHHHHhccC-------CCCcHHHHHHHHHHHHHhhCCCchHHHHH-hcCCHHHHHHHHhccCCCHH
Q 010019          345 EICKSVAENGGIDALLRCIDDSG-------LQGNKTVARICCSLLSKLAGSDSNKSAII-ENGGMDKLIVVSARFSDDAS  416 (520)
Q Consensus       345 e~~~~i~~~Ggv~~Ll~lL~~~~-------~~~~~~v~~~al~aL~~La~~~~~k~~Iv-~~g~l~~Lv~lL~~~~~~~~  416 (520)
                      ...+.+ ..+|+..|+.+|....       ...+......++.+|+.|..+..+...++ ..+++..|+..|.  +..+.
T Consensus        37 sWv~~F-~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~--s~~~~  113 (343)
T d2bnxa1          37 SWVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMD--PAVPN  113 (343)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCC--TTSHH
T ss_pred             hHHHHH-HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhccHHHHHHHHcChHHHHHHHHccC--CCchH
Confidence            456666 5678899998885421       11235688899999999998877666654 4567888988887  77899


Q ss_pred             HHHHHHHHHHHHhcCC--HHHHHH----------HHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHH-hhhCh------
Q 010019          417 VLQEVMSIITVLSLRS--PENAAR----------AMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNL-VARNP------  477 (520)
Q Consensus       417 v~~~a~~aL~nLa~~~--~~~~~~----------i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL-~~~~~------  477 (520)
                      ++..+.-.|+.+|.-.  ++....          ..+.+-...+++.|+.. ++...+ .+|+.+-|. +...+      
T Consensus       114 tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv~~l~~~-~~~ey~-~a~m~lIN~li~~~~dl~~R~  191 (343)
T d2bnxa1         114 MMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSG-TSIALK-VGCLQLINALITPAEELDFRV  191 (343)
T ss_dssp             HHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTT-SCHHHH-HHHHHHHHHHHTTCSCHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHHHHHhcc-ccHHHH-HHHHHHHHHHHcCcccHHHHH
Confidence            9999999999998532  111222          22233456667666543 455554 445544454 43333      


Q ss_pred             hhHHHHHhCCHHHHHHHHHHh
Q 010019          478 ENRKLLLSNGVEKLIRQAKEN  498 (520)
Q Consensus       478 e~~~~l~~~G~~~lL~~~~~~  498 (520)
                      ..|..|...|+.+++..+...
T Consensus       192 ~lR~E~~~~Gl~~il~~l~~~  212 (343)
T d2bnxa1         192 HIRSELMRLGLHQVLQELREI  212 (343)
T ss_dssp             HHHHHHHHTTHHHHHHHHTTC
T ss_pred             HHHHHHHHCChHHHHHHHHcc
Confidence            236777788999999877543


No 34 
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.30  E-value=2.6  Score=39.67  Aligned_cols=150  Identities=13%  Similarity=0.110  Sum_probs=94.6

Q ss_pred             hcCCcHHHHHHHhcC---C------CChHHHHHHHHHHHHHhcCChhhHHHHHhc-CCHHHHHHHHhcCChHHHHHHHHH
Q 010019          215 TGGGPKLLVNILIDG---N------EDPEILNSGFAVVAASATGNEVVKESYMEL-KIDELILEILSRQRNDSIQSLYDA  284 (520)
Q Consensus       215 ~~ggi~~Lv~lL~~~---~------~~~~v~~~a~~~L~~~~~~~e~nr~~i~~~-g~i~~Lv~lL~~~~~~~~~~a~~a  284 (520)
                      ..+|+..|+++|..-   .      .+...+..++++|..++. +......+++. .++..|+..|.+....+...|...
T Consensus        43 ~~~G~~~L~~~L~~l~~~~~~~~~~~d~~~e~e~l~CLkalmn-~~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~el  121 (343)
T d2bnxa1          43 GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMN-NKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKL  121 (343)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHHHHTS-SHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHH
T ss_pred             HhccHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhc-cHHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHH
Confidence            456888888877431   1      124577788899988865 45555555544 688888888877666777779999


Q ss_pred             HHHhcCCCCc---chhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccC-hh------hHHHHHhcC
Q 010019          285 IRVLLTPDDD---QVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVN-DE------ICKSVAENG  354 (520)
Q Consensus       285 L~~Ls~~dd~---~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~-~e------~~~~i~~~G  354 (520)
                      |..+|...++   ....-.+.++.....+.+-..++++.|+...+.+.+..+...+-.|... ++      .+..+..+ 
T Consensus       122 L~~lc~~~~~~~g~~~vL~Al~~~~~~~e~~RF~~lv~~l~~~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~-  200 (343)
T d2bnxa1         122 LSALCILPQPEDMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRL-  200 (343)
T ss_dssp             HHHHHTCCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHT-
T ss_pred             HHHHHhccCCCchHHHHHHHHHHHHHhcCCCcHHHHHHHHhccccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHC-
Confidence            9999865432   1111223344444555677899999998765555555554444444432 22      23445566 


Q ss_pred             ChHHHHHHHhcc
Q 010019          355 GIDALLRCIDDS  366 (520)
Q Consensus       355 gv~~Ll~lL~~~  366 (520)
                      |+..++.-|+..
T Consensus       201 Gl~~il~~l~~~  212 (343)
T d2bnxa1         201 GLHQVLQELREI  212 (343)
T ss_dssp             THHHHHHHHTTC
T ss_pred             ChHHHHHHHHcc
Confidence            466677777764


No 35 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=87.63  E-value=3.1  Score=39.01  Aligned_cols=136  Identities=12%  Similarity=0.160  Sum_probs=76.5

Q ss_pred             HHHHHHHHhcC---CChhHHHHHHHHHHHhc----cChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhh
Q 010019          314 ARALVHSLHAG---LSSPSLISASIALKAVA----VNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLA  386 (520)
Q Consensus       314 l~~Lv~lL~~~---~~~~~~~~a~~aL~~La----~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La  386 (520)
                      +..+.++++..   .++.+...+..++++|.    .+...|.    ...++.+.+.+....+..+.+-...++.+|+|+.
T Consensus       125 l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c~~~~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g  200 (336)
T d1lsha1         125 LSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCP----DELLQPLHDLLSQSSDRAKEEEIVLALKALGNAG  200 (336)
T ss_dssp             HHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCC----GGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHhcCCCCCc----HHHHHHHHHHHHHhhcccchHHHHHHHHHHhccC
Confidence            44555555431   23455566667776665    2323332    1224555555543222223355567788888874


Q ss_pred             CCCchHHHHHhcCCHHHHHHHHhcc-----CCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHH
Q 010019          387 GSDSNKSAIIENGGMDKLIVVSARF-----SDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQL  461 (520)
Q Consensus       387 ~~~~~k~~Iv~~g~l~~Lv~lL~~~-----~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~v  461 (520)
                       .+         +.++.|...+...     .....++..|+++|..++..+|...+        +.++.++.+...+.++
T Consensus       201 -~p---------~~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~~p~~v~--------~~l~~i~~n~~e~~Ev  262 (336)
T d1lsha1         201 -QP---------NSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQ--------EIVLPIFLNVAIKSEL  262 (336)
T ss_dssp             -CG---------GGHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHHHH--------HHHHHHHHCTTSCHHH
T ss_pred             -CH---------hHHHHHHHHhcccccccccccHHHHHHHHHHHHHhhhcCcHHHH--------HHHHHHHcCCCCChHH
Confidence             33         2355666656421     12578999999999999987775443        3344555555566776


Q ss_pred             HHHHHHHHHH
Q 010019          462 QRSSCFMIRN  471 (520)
Q Consensus       462 qk~A~~aL~n  471 (520)
                      .-.|..+|-.
T Consensus       263 RiaA~~~lm~  272 (336)
T d1lsha1         263 RIRSCIVFFE  272 (336)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            6556555533


No 36 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.53  E-value=38  Score=30.96  Aligned_cols=170  Identities=11%  Similarity=0.073  Sum_probs=124.0

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCChhHHHHHHHHHHHhccC-hhh----HHHHHhcCChHHHHHHHhccCCCCcHHHHHHHH
Q 010019          305 ARRFAKIGIARALVHSLHAGLSSPSLISASIALKAVAVN-DEI----CKSVAENGGIDALLRCIDDSGLQGNKTVARICC  379 (520)
Q Consensus       305 a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~-~e~----~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al  379 (520)
                      ++.+...+.+..|+..|..- +-+..++++....+|... .+.    ..-+...  -+.|..++..+ +.+  ++.-.+=
T Consensus        62 ~~e~~~~d~l~~Li~~L~~L-~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~--~eil~~L~~gy-e~~--eiAl~~G  135 (330)
T d1upka_          62 AQELYNSGLLSTLVADLQLI-DFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQ--QNILFMLLKGY-ESP--EIALNCG  135 (330)
T ss_dssp             HHHHHHHSHHHHHHHTGGGS-CHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTC--THHHHHHHHGG-GST--TTHHHHH
T ss_pred             HHHHHHhChHHHHHHhCCCC-CCchhhhHHHHHHHHhhcCCCCCCccHHHHHcC--HHHHHHHHhhc-CCc--chhhhhh
Confidence            34677778888888888764 456788998888888632 111    1233322  24455555543 433  6767777


Q ss_pred             HHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCc---HHHHHHHHHhCC
Q 010019          380 SLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGS---GDLAIQAMLKFP  456 (520)
Q Consensus       380 ~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~---i~~lv~~L~~~~  456 (520)
                      ..|+-...++.....|.....+..+.+.++  .++-+|.-.|..++..|-.+++......+..+.   ....-.+|  .+
T Consensus       136 ~mLREcik~e~lak~iL~s~~f~~fF~yv~--~~~FdiasDAf~TfkelLt~hk~~~aefl~~Nyd~Ff~~~~~LL--~s  211 (330)
T d1upka_         136 IMLRECIRHEPLAKIILWSEQFYDFFRYVE--MSTFDIASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLL--HS  211 (330)
T ss_dssp             HHHHHHHTSHHHHHHHHHSGGGGHHHHHTT--CSSHHHHHHHHHHHHHHHHSSHHHHHHHHHHTHHHHHHHHHHHT--TC
T ss_pred             HHHHHHHhhHHHHHHHHccHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHhCHHHHHHHHHHhHHHHHHHHHHHh--cC
Confidence            778888888888888988888999999888  778999999999999999999988888887764   34445556  45


Q ss_pred             CCHHHHHHHHHHHHHHhhhChhhHHHHHh
Q 010019          457 NAQQLQRSSCFMIRNLVARNPENRKLLLS  485 (520)
Q Consensus       457 ~~~~vqk~A~~aL~nL~~~~~e~~~~l~~  485 (520)
                      ++..+++++.-+|..+.. ++.+...|..
T Consensus       212 ~NYVtrRqSlKLLgelLl-dr~N~~vm~~  239 (330)
T d1upka_         212 ENYVTKRQSLKLLGELLL-DRHNFTIMTK  239 (330)
T ss_dssp             SSHHHHHHHHHHHHHHHH-SGGGHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHh-hhhHHHHHHH
Confidence            799999999999999953 4566555543


No 37 
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.52  E-value=40  Score=30.80  Aligned_cols=223  Identities=10%  Similarity=0.102  Sum_probs=136.0

Q ss_pred             HHhcCcHHHHHHHHhhcccCcHHHHHHHHHHHHHhhccccc-c---hhHHhcCCcHHHHHHHhcCCCChHHHHHHHHHHH
Q 010019          169 ATKNGGVELVCSICYKMRCGSKRVLDSCLKTMALLVHDVQS-T---ETFRTGGGPKLLVNILIDGNEDPEILNSGFAVVA  244 (520)
Q Consensus       169 i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~La~l~~~~~~-~---~~i~~~ggi~~Lv~lL~~~~~~~~v~~~a~~~L~  244 (520)
                      +.+.+.+..|+..|..-   +-+....+....+.+..-+.+ +   .+.+..  -|.++..|-++.+++++...+-..|+
T Consensus        65 ~~~~d~l~~Li~~L~~L---~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~--~~eil~~L~~gye~~eiAl~~G~mLR  139 (330)
T d1upka_          65 LYNSGLLSTLVADLQLI---DFEGKKDVAQIFNNILRRQIGTRTPTVEYICT--QQNILFMLLKGYESPEIALNCGIMLR  139 (330)
T ss_dssp             HHHHSHHHHHHHTGGGS---CHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHT--CTHHHHHHHHGGGSTTTHHHHHHHHH
T ss_pred             HHHhChHHHHHHhCCCC---CCchhhhHHHHHHHHhhcCCCCCCccHHHHHc--CHHHHHHHHhhcCCcchhhhhhHHHH
Confidence            33456777788777664   444444555666666643321 1   122332  23444444445567777766555565


Q ss_pred             HHhcCChhhHHHHHhcCCHHHHHHHHhcCChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHc---CCHHHHHHHH
Q 010019          245 ASATGNEVVKESYMELKIDELILEILSRQRNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKI---GIARALVHSL  321 (520)
Q Consensus       245 ~~~~~~e~nr~~i~~~g~i~~Lv~lL~~~~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~---g~l~~Lv~lL  321 (520)
                      .+ .+++.-...+........+.+.+...+=++...|..++..|.+.... +        +..+...   ........+|
T Consensus       140 Ec-ik~e~lak~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~hk~-~--------~aefl~~Nyd~Ff~~~~~LL  209 (330)
T d1upka_         140 EC-IRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRHKL-L--------SAEFLEQHYDRFFSEYEKLL  209 (330)
T ss_dssp             HH-HTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSSHH-H--------HHHHHHHTHHHHHHHHHHHT
T ss_pred             HH-HhhHHHHHHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhCHH-H--------HHHHHHHhHHHHHHHHHHHh
Confidence            54 67888888888888888888888775548888888888877653311 1        1122211   1344556777


Q ss_pred             hcCCChhHHHHHHHHHHHhccChhhHHHHH----hcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCCCchHHHHHh
Q 010019          322 HAGLSSPSLISASIALKAVAVNDEICKSVA----ENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGSDSNKSAIIE  397 (520)
Q Consensus       322 ~~~~~~~~~~~a~~aL~~La~~~e~~~~i~----~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~~~~k~~Iv~  397 (520)
                      .+. +=-++..+...|+.+..+..|...+.    +..-+..++.+|++.    +..++-+|.-++.-...+|..-..|.+
T Consensus       210 ~s~-NYVtrRqSlKLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~----sk~Iq~EAFhVFKvFVANpnKp~~I~~  284 (330)
T d1upka_         210 HSE-NYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDK----SRNIQFEAFHVFKVFVANPNKTQPILD  284 (330)
T ss_dssp             TCS-SHHHHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCS----CHHHHHHHHHHHHHHHHCSSCCHHHHH
T ss_pred             cCC-chHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCc----hhhHHHHhhhHhhhhhcCCCCCHHHHH
Confidence            654 33467889999999987777765543    333467788888763    358999999999888766643333322


Q ss_pred             c--CCHHHHHHHHhcc
Q 010019          398 N--GGMDKLIVVSARF  411 (520)
Q Consensus       398 ~--g~l~~Lv~lL~~~  411 (520)
                      -  .-=..|+..|..+
T Consensus       285 IL~~Nr~kLl~fl~~f  300 (330)
T d1upka_         285 ILLKNQAKLIEFLSKF  300 (330)
T ss_dssp             HHHHTHHHHHHHHHHT
T ss_pred             HHHHhHHHHHHHHHhC
Confidence            1  1124555555544


No 38 
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=68.87  E-value=0.6  Score=34.04  Aligned_cols=25  Identities=20%  Similarity=0.425  Sum_probs=20.7

Q ss_pred             HhhcCCChhHHHHHHHHHH-hhcCcc
Q 010019           77 MEDLGMEPTEALQDAIQTL-SLQGVD  101 (520)
Q Consensus        77 i~~~~m~p~eal~~aI~qf-~~qgvd  101 (520)
                      +...++.||.+||++|++| +.+||+
T Consensus        53 l~~~~l~pN~~L~~~I~~~~~~~~~e   78 (78)
T d1t1ha_          53 LLHAGLTPNYVLKSLIALWCESNGIE   78 (78)
T ss_dssp             CSSCCCEECTTTHHHHHHHHHHSCCC
T ss_pred             CCcccccchHHHHHHHHHHHHHhCcC
Confidence            4456788999999999999 778874


No 39 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=52.79  E-value=3.1  Score=36.93  Aligned_cols=146  Identities=15%  Similarity=0.045  Sum_probs=66.3

Q ss_pred             CCHHHHHHHHhcCChHHHHHHHHH-----HHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCCChhHHHHHHH
Q 010019          261 KIDELILEILSRQRNDSIQSLYDA-----IRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGLSSPSLISASI  335 (520)
Q Consensus       261 g~i~~Lv~lL~~~~~~~~~~a~~a-----L~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~~~~~~~~a~~  335 (520)
                      -.+..|+.+++..+..+...++..     |..|..+++..|        .+..+..=..+.|..+++. ++..+...++.
T Consensus        66 a~~~~L~~Ll~D~d~~VR~~AA~~Lp~~~L~~L~~D~d~~V--------R~~aa~~l~~~~L~~Ll~D-~d~~VR~~aa~  136 (233)
T d1lrva_          66 SPVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREV--------RITVADRLPLEQLEQMAAD-RDYLVRAYVVQ  136 (233)
T ss_dssp             SCGGGGGGGTTCSSHHHHHHHHTTSCSGGGGGTTTCSCHHH--------HHHHHHHSCTGGGGGGTTC-SSHHHHHHHHH
T ss_pred             CCHHHHHHHhcCCCHHHHHHHHHHcCHHHHHHHhcCCChhH--------HHHHHhccCHHHHHHHhcC-CCHHHHHHHHh
Confidence            345566666665554666555533     344544444333        1122232234555555543 34555444443


Q ss_pred             H-----HHHhcc--ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHH-----HHhhCCC--chHHHHHhcCCH
Q 010019          336 A-----LKAVAV--NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLL-----SKLAGSD--SNKSAIIENGGM  401 (520)
Q Consensus       336 a-----L~~La~--~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL-----~~La~~~--~~k~~Iv~~g~l  401 (520)
                      .     |..|..  +.+.+..+...-+.+.|..++.+    .+..|...+...|     ..|+..+  ..|..+++.. .
T Consensus       137 ~~~~~~L~~L~~D~d~~VR~~aA~~~~~~~L~~l~~D----~d~~VR~~aa~~L~~~~L~~l~~D~d~~VR~aaae~~-~  211 (233)
T d1lrva_         137 RIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQD----PEPEVRRIVASRLRGDDLLELLHDPDWTVRLAAVEHA-S  211 (233)
T ss_dssp             HSCGGGGGGTTTCSCHHHHHHHHHHSCGGGGGGSTTC----SSHHHHHHHHHHCCGGGGGGGGGCSSHHHHHHHHHHS-C
T ss_pred             ccchhHHHHHhcCCCHHHHHHHHHhcCHHHHHHHccC----CCHHHHHHHHHhcCcHHHHHHHhCCCHHHHHHHHHhc-c
Confidence            2     222332  22334444444455555555443    2346666665433     2333222  3344444432 2


Q ss_pred             HHHHHHHhccCCCHHHHHHHH
Q 010019          402 DKLIVVSARFSDDASVLQEVM  422 (520)
Q Consensus       402 ~~Lv~lL~~~~~~~~v~~~a~  422 (520)
                      +.++..|.  .+++.|++.+.
T Consensus       212 ~~ll~~L~--D~d~~VR~aA~  230 (233)
T d1lrva_         212 LEALRELD--EPDPEVRLAIA  230 (233)
T ss_dssp             HHHHHHCC--CCCHHHHHHHH
T ss_pred             HHHHHHhC--CCCHHHHHHHH
Confidence            33445554  44566665544


No 40 
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=47.40  E-value=3.2  Score=36.82  Aligned_cols=33  Identities=12%  Similarity=0.082  Sum_probs=19.3

Q ss_pred             chHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHH
Q 010019          390 SNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSI  424 (520)
Q Consensus       390 ~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~a  424 (520)
                      +.+..+...-+.+.|..+++  ..++.|+..++..
T Consensus       153 ~VR~~aA~~~~~~~L~~l~~--D~d~~VR~~aa~~  185 (233)
T d1lrva_         153 QVRKLVAKRLPEESLGLMTQ--DPEPEVRRIVASR  185 (233)
T ss_dssp             HHHHHHHHHSCGGGGGGSTT--CSSHHHHHHHHHH
T ss_pred             HHHHHHHHhcCHHHHHHHcc--CCCHHHHHHHHHh
Confidence            34444444445566666665  5677777776654


No 41 
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.65  E-value=2.2  Score=30.94  Aligned_cols=26  Identities=19%  Similarity=0.397  Sum_probs=20.1

Q ss_pred             HHHHhhcCCChhHHHHHHHHHH-hhcC
Q 010019           74 KENMEDLGMEPTEALQDAIQTL-SLQG   99 (520)
Q Consensus        74 ~eni~~~~m~p~eal~~aI~qf-~~qg   99 (520)
                      ++.+...++.||.+|+++|++| +.+|
T Consensus        49 ~~~l~~~~l~pN~~L~~~I~~~l~~~~   75 (80)
T d2c2la2          49 RSPLTQEQLIPNLAMKEVIDAFISENG   75 (80)
T ss_dssp             CCCCCGGGCEECHHHHHHHHHHHTTCS
T ss_pred             cccccccccccHHHHHHHHHHHHHHCC
Confidence            4445566789999999999999 4445


No 42 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.50  E-value=73  Score=32.36  Aligned_cols=131  Identities=13%  Similarity=0.151  Sum_probs=78.6

Q ss_pred             HHHHHHHhcC-ChHHHHHHHHHHHHhcCCCCcchhhhhhchHHHHHHHcCCHHHHHHHHhcCC-ChhHHHHHHHHHHHhc
Q 010019          264 ELILEILSRQ-RNDSIQSLYDAIRVLLTPDDDQVVASQVYGYARRFAKIGIARALVHSLHAGL-SSPSLISASIALKAVA  341 (520)
Q Consensus       264 ~~Lv~lL~~~-~~~~~~~a~~aL~~Ls~~dd~~v~~~~a~~~a~~i~~~g~l~~Lv~lL~~~~-~~~~~~~a~~aL~~La  341 (520)
                      +.|..+|... +.+.++.|-.-|..+..++                   |.+..|+.++.+.. +..+...|+..|.|..
T Consensus         5 ~~l~~ll~~s~~~~~~k~Ae~~L~~~~~~p-------------------~f~~~L~~i~~~~~~~~~iR~~A~i~lKn~i   65 (959)
T d1wa5c_           5 ETVAKFLAESVIASTAKTSERNLRQLETQD-------------------GFGLTLLHVIASTNLPLSTRLAGALFFKNFI   65 (959)
T ss_dssp             HHHHHHHHHTTSGGGHHHHHHHHHHHHTST-------------------THHHHHHHHHHCTTSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCChHHHHHHHHHHHHHHcCC-------------------CHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            4455555543 3355666666666665432                   55778888887655 4567777777777665


Q ss_pred             c------------ChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhCC--CchHHHHHhcCCHHHHHHH
Q 010019          342 V------------NDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAGS--DSNKSAIIENGGMDKLIVV  407 (520)
Q Consensus       342 ~------------~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~~--~~~k~~Iv~~g~l~~Lv~l  407 (520)
                      .            .++.+..|.     ..++.+|...    +..+....+.+++.++..  |+.=     -+.++.|++.
T Consensus        66 ~~~W~~~~~~~~i~~e~k~~Ik-----~~ll~~l~~~----~~~ir~~l~~~i~~I~~~d~p~~W-----p~ll~~l~~~  131 (959)
T d1wa5c_          66 KRKWVDENGNHLLPANNVELIK-----KEIVPLMISL----PNNLQVQIGEAISSIADSDFPDRW-----PTLLSDLASR  131 (959)
T ss_dssp             HHHSBCSSSCBSSCHHHHHHHH-----HHHHHHHHHS----CHHHHHHHHHHHHHHHHHHSTTTC-----TTHHHHHHTT
T ss_pred             HHhcccccccCCCCHHHHHHHH-----HHHHHHHhCC----cHHHHHHHHHHHHHHHHHhCcccc-----HHHHHHHHHH
Confidence            2            123343333     3566666542    236888888888888742  1110     0345666666


Q ss_pred             HhccCCCHHHHHHHHHHHHHHh
Q 010019          408 SARFSDDASVLQEVMSIITVLS  429 (520)
Q Consensus       408 L~~~~~~~~v~~~a~~aL~nLa  429 (520)
                      ++  ++++..+..++.+|..++
T Consensus       132 l~--s~~~~~~~~~L~~l~~i~  151 (959)
T d1wa5c_         132 LS--NDDMVTNKGVLTVAHSIF  151 (959)
T ss_dssp             CC--SSCTTHHHHHHHHHHHHH
T ss_pred             hC--CCCHHHHHHHHHHHHHHH
Confidence            65  556677777788887776


No 43 
>d2bj7a1 a.43.1.3 (A:1-50) Nickel responsive regulator NikR, N-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=41.60  E-value=13  Score=24.28  Aligned_cols=26  Identities=31%  Similarity=0.540  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010019           67 EAFDEVVKENMEDLGMEPTEALQDAIQTL   95 (520)
Q Consensus        67 etfDe~V~eni~~~~m~p~eal~~aI~qf   95 (520)
                      +.||+.|++.=  | -+..||+|++|.++
T Consensus        16 ~~lD~~v~~~g--y-~nRSEaIRdliR~~   41 (50)
T d2bj7a1          16 EKFDQIIEEIG--Y-ENRSEAIRDLIRDF   41 (50)
T ss_dssp             HHHHHHHHHHT--C-SSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC--C-CcHHHHHHHHHHHH
Confidence            57888888732  3 38889999998875


No 44 
>d2hzaa1 a.43.1.3 (A:1-48) Nickel responsive regulator NikR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=38.61  E-value=16  Score=23.63  Aligned_cols=26  Identities=19%  Similarity=0.318  Sum_probs=18.3

Q ss_pred             HHHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 010019           67 EAFDEVVKENMEDLGMEPTEALQDAIQTL   95 (520)
Q Consensus        67 etfDe~V~eni~~~~m~p~eal~~aI~qf   95 (520)
                      +.||+.|++.=   =-+..||+|++|..+
T Consensus        14 ~~lD~~v~~~g---y~nRSEaIRdliR~~   39 (48)
T d2hzaa1          14 ETLDSLSQRRG---YNNRSEAIRDILRSA   39 (48)
T ss_dssp             HHHHHHHHHTT---CCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC---CCcHHHHHHHHHHHH
Confidence            56788887732   247788888888764


No 45 
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.31  E-value=48  Score=33.87  Aligned_cols=135  Identities=9%  Similarity=0.086  Sum_probs=85.4

Q ss_pred             HHHHHHHHhcCCChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHHHHHhccCCCCcHHHHHHHHHHHHHhhC------
Q 010019          314 ARALVHSLHAGLSSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSGLQGNKTVARICCSLLSKLAG------  387 (520)
Q Consensus       314 l~~Lv~lL~~~~~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~~~~~~~v~~~al~aL~~La~------  387 (520)
                      ++.|.++|....+++..+.|=..|..+..++++         ...|+.++.+...  +..++..|+-.|+|...      
T Consensus         4 ~~~l~~ll~~s~~~~~~k~Ae~~L~~~~~~p~f---------~~~L~~i~~~~~~--~~~iR~~A~i~lKn~i~~~W~~~   72 (959)
T d1wa5c_           4 LETVAKFLAESVIASTAKTSERNLRQLETQDGF---------GLTLLHVIASTNL--PLSTRLAGALFFKNFIKRKWVDE   72 (959)
T ss_dssp             HHHHHHHHHHTTSGGGHHHHHHHHHHHHTSTTH---------HHHHHHHHHCTTS--CHHHHHHHHHHHHHHHHHHSBCS
T ss_pred             HHHHHHHHHHCCChHHHHHHHHHHHHHHcCCCH---------HHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHhcccc
Confidence            567888888766777788888888888666543         4556667765322  24677788888887752      


Q ss_pred             ------CCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHhcCcHHHHHHHHHhCCCCHH
Q 010019          388 ------SDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRS-PENAARAMEAGSGDLAIQAMLKFPNAQQ  460 (520)
Q Consensus       388 ------~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~-~~~~~~i~~~G~i~~lv~~L~~~~~~~~  460 (520)
                            +++.|..|.+     .|+..|.  ..+..++...+.+++.++..+ |+...     +.++.+++.++.  ++..
T Consensus        73 ~~~~~i~~e~k~~Ik~-----~ll~~l~--~~~~~ir~~l~~~i~~I~~~d~p~~Wp-----~ll~~l~~~l~s--~~~~  138 (959)
T d1wa5c_          73 NGNHLLPANNVELIKK-----EIVPLMI--SLPNNLQVQIGEAISSIADSDFPDRWP-----TLLSDLASRLSN--DDMV  138 (959)
T ss_dssp             SSCBSSCHHHHHHHHH-----HHHHHHH--HSCHHHHHHHHHHHHHHHHHHSTTTCT-----THHHHHHTTCCS--SCTT
T ss_pred             cccCCCCHHHHHHHHH-----HHHHHHh--CCcHHHHHHHHHHHHHHHHHhCccccH-----HHHHHHHHHhCC--CCHH
Confidence                  1233444433     5566665  457789999999999888521 22211     345566666643  4555


Q ss_pred             HHHHHHHHHHHHh
Q 010019          461 LQRSSCFMIRNLV  473 (520)
Q Consensus       461 vqk~A~~aL~nL~  473 (520)
                      .+..+..+|..++
T Consensus       139 ~~~~~L~~l~~i~  151 (959)
T d1wa5c_         139 TNKGVLTVAHSIF  151 (959)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            5566677776665


No 46 
>d1nh2d1 a.32.1.1 (D:5-54) Small chain TOA2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.78  E-value=15  Score=23.83  Aligned_cols=23  Identities=26%  Similarity=0.551  Sum_probs=15.3

Q ss_pred             CCCCcchhhhhhHHHHHHHHHHHHh
Q 010019           54 EMGPPKTVRTISQEAFDEVVKENME   78 (520)
Q Consensus        54 ~~~~~~~~~~isQetfDe~V~eni~   78 (520)
                      .|.|..++|+..|  ||.++.|.+.
T Consensus        27 ~I~p~LA~kVL~q--FDk~i~~aL~   49 (50)
T d1nh2d1          27 RIEASLAMRVLET--FDKVVAETLK   49 (50)
T ss_dssp             SSCHHHHHHHHHH--HHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH--HHHHHHHHhc
Confidence            5666667776654  7877777654


No 47 
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=24.96  E-value=2.2e+02  Score=25.24  Aligned_cols=127  Identities=16%  Similarity=0.129  Sum_probs=76.8

Q ss_pred             ChhHHHHHHHHHHHhccChhhHHHHHhcCChHHHHHHHhccC---CCCcHHHHHHHHHHHHHhhCCCchHHHHHhcCCHH
Q 010019          326 SSPSLISASIALKAVAVNDEICKSVAENGGIDALLRCIDDSG---LQGNKTVARICCSLLSKLAGSDSNKSAIIENGGMD  402 (520)
Q Consensus       326 ~~~~~~~a~~aL~~La~~~e~~~~i~~~Ggv~~Ll~lL~~~~---~~~~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~  402 (520)
                      +.+...-+..+|+|+.. ++         .++.|..++....   +.....+...|..+|++++..+..+       .-+
T Consensus       185 ~~~~~~~~LkaLGN~g~-p~---------~i~~l~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~~p~~-------v~~  247 (336)
T d1lsha1         185 KEEEIVLALKALGNAGQ-PN---------SIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRK-------VQE  247 (336)
T ss_dssp             CHHHHHHHHHHHHHHTC-GG---------GHHHHHTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHH-------HHH
T ss_pred             chHHHHHHHHHHhccCC-Hh---------HHHHHHHHhcccccccccccHHHHHHHHHHHHHhhhcCcHH-------HHH
Confidence            44445556788888853 22         2455555554311   1123578899999999998654211       223


Q ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhcCcHHHHHHHHHhCCCCHHHHHHHHHHHHHHhh-hChhhH
Q 010019          403 KLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAMEAGSGDLAIQAMLKFPNAQQLQRSSCFMIRNLVA-RNPENR  480 (520)
Q Consensus       403 ~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~~G~i~~lv~~L~~~~~~~~vqk~A~~aL~nL~~-~~~e~~  480 (520)
                      .+..+......+++++-.|+.+|.. |  +|..       ..+..+...+... .+.+|..-....|+|++. .+|+..
T Consensus       248 ~l~~i~~n~~e~~EvRiaA~~~lm~-t--~P~~-------~~l~~i~~~l~~E-~~~QV~sfv~S~l~~la~s~~P~~~  315 (336)
T d1lsha1         248 IVLPIFLNVAIKSELRIRSCIVFFE-S--KPSV-------ALVSMVAVRLRRE-PNLQVASFVYSQMRSLSRSSNPEFR  315 (336)
T ss_dssp             HHHHHHHCTTSCHHHHHHHHHHHHH-T--CCCH-------HHHHHHHHHHTTC-SCHHHHHHHHHHHHHHTTCCSGGGH
T ss_pred             HHHHHHcCCCCChHHHHHHHHHHHh-c--CCCH-------HHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhCCCcchH
Confidence            5666666667789998888888764 3  2221       1345556666544 466776667778888864 455554


No 48 
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=23.19  E-value=60  Score=27.92  Aligned_cols=100  Identities=10%  Similarity=0.008  Sum_probs=62.6

Q ss_pred             cHHHHHHHHHHHHHhhCCCchHHHHHhcCCHHHHHHHHhccCCCHHHHHHHHHHHHHHhcCCHHHHHHHHh-cCcHHHHH
Q 010019          371 NKTVARICCSLLSKLAGSDSNKSAIIENGGMDKLIVVSARFSDDASVLQEVMSIITVLSLRSPENAARAME-AGSGDLAI  449 (520)
Q Consensus       371 ~~~v~~~al~aL~~La~~~~~k~~Iv~~g~l~~Lv~lL~~~~~~~~v~~~a~~aL~nLa~~~~~~~~~i~~-~G~i~~lv  449 (520)
                      +..++...|..+  +...+.         +.+.+...+.  ++++-.+..+...++.+..+.++....-.+ ...++.+-
T Consensus        91 nW~l~D~~~~~v--~~~~~~---------~~~~~~~W~~--S~~~w~rRag~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  157 (235)
T d1t06a_          91 FYMLSDYVVAVT--LSESNI---------AQDVADKWIA--SGDELKMSAGWSCYCWLLGNRKDNAFSESKISDMLEMVK  157 (235)
T ss_dssp             SHHHHHHTHHHH--HTTSSS---------HHHHHHHHHH--SCCHHHHHHHHHHHHHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHH--HHhChh---------HHHHHHHHhc--CChHHHHHHHHHHHHHHHHhCccCCCCHHHHHHHHHHHH
Confidence            457777666543  222222         2345666777  789999999988888887533221100000 01122233


Q ss_pred             HHHHhCCCCHHHHHHHHHHHHHHhhhChhhHHHHHh
Q 010019          450 QAMLKFPNAQQLQRSSCFMIRNLVARNPENRKLLLS  485 (520)
Q Consensus       450 ~~L~~~~~~~~vqk~A~~aL~nL~~~~~e~~~~l~~  485 (520)
                      ..+  |....-||+...|+|+.+.-++++.....++
T Consensus       158 ~~i--~d~~~~v~kAv~W~Lr~ig~~~~~l~~~al~  191 (235)
T d1t06a_         158 DTI--HHSPERTKSAMNNFLNTVAISYVPLHEKAVE  191 (235)
T ss_dssp             HHG--GGSCHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred             Hhc--cCchHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence            334  4467899999999999998899999887775


No 49 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.99  E-value=1.5e+02  Score=23.15  Aligned_cols=75  Identities=11%  Similarity=-0.081  Sum_probs=53.4

Q ss_pred             HHHHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhc---ccCcHHHHHHH
Q 010019          120 LIQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKM---RCGSKRVLDSC  196 (520)
Q Consensus       120 ~~~~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~---~~~~~~~~~~a  196 (520)
                      ...+++.|+..+.+       +++..+..+|.-|..+.+. =++.++..++..+.+..|+.+++..   ...+..+...+
T Consensus        43 ~k~a~r~l~krl~~-------~~~~~~l~aL~LLe~~vkN-CG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~ki  114 (145)
T d1ujka_          43 PPLATRLLAHKIQS-------PQEWEAIQALTVLETCMKS-CGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKI  114 (145)
T ss_dssp             HHHHHHHHHHHHTC-------SSHHHHHHHHHHHHHHHTS-CCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHH
T ss_pred             HHHHHHHHHHHHcC-------CCHHHHHHHHHHHHHHHHH-HhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHH
Confidence            35689999999987       7888888888888665553 2578888888999999999988631   11245566555


Q ss_pred             HHHHHH
Q 010019          197 LKTMAL  202 (520)
Q Consensus       197 l~~La~  202 (520)
                      +..|-.
T Consensus       115 l~li~~  120 (145)
T d1ujka_         115 LELLYS  120 (145)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555543


No 50 
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.33  E-value=94  Score=24.39  Aligned_cols=61  Identities=11%  Similarity=0.082  Sum_probs=45.9

Q ss_pred             CcHHHHHHHHHHHHHhhCC--CchHHHHHhcCCHHHHHHHHhc----cCCCHHHHHHHHHHHHHHhc
Q 010019          370 GNKTVARICCSLLSKLAGS--DSNKSAIIENGGMDKLIVVSAR----FSDDASVLQEVMSIITVLSL  430 (520)
Q Consensus       370 ~~~~v~~~al~aL~~La~~--~~~k~~Iv~~g~l~~Lv~lL~~----~~~~~~v~~~a~~aL~nLa~  430 (520)
                      .++.++..|+.+|-.+..|  +.....|.+.+.+..|+.++..    ...++.|++..+..|..-+.
T Consensus        57 ~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~  123 (145)
T d1ujka_          57 PQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTV  123 (145)
T ss_dssp             SSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHH
Confidence            3467888899999888855  5666788888889999998853    12467888888888866543


No 51 
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.48  E-value=1e+02  Score=23.98  Aligned_cols=74  Identities=9%  Similarity=-0.010  Sum_probs=51.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCChhhHHHHHHHHHHHHHHhcCCCChhhHHHHHhcCcHHHHHHHHhhcccCcHHHHHHHHHH
Q 010019          120 LIQSLERLKQLDLNSKDKFSDEDLNEMMGLFDKLIELCGGNEGSVNAAVATKNGGVELVCSICYKMRCGSKRVLDSCLKT  199 (520)
Q Consensus       120 ~~~~l~~L~~~l~~~~~~~~~~d~~~~~~al~~L~~l~~~~~~~~~r~~i~~~Gaip~Lv~lL~~~~~~~~~~~~~al~~  199 (520)
                      ...+++.|+..+.+       +++..+..|+.-|..+.+. =+......+...+.+..|+.++++.  .+..+...++..
T Consensus        40 ~k~a~ral~krl~~-------~n~~v~l~aL~LLd~~vkN-cG~~f~~~i~s~~fl~~l~~l~~~~--~~~~Vk~kil~l  109 (145)
T d1dvpa1          40 PKNAFAAIKKKMNS-------PNPHSSCYSLLVLESIVKN-CGAPVHEEVFTKENCEMFSSFLEST--PHENVRQKMLEL  109 (145)
T ss_dssp             HHHHHHHHHHHHTC-------SSHHHHHHHHHHHHHHHHH-SHHHHHHHHSSHHHHHHHHHHHHHC--SCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcC-------CCHHHHHHHHHHHHHHHHc-cchHHHHHHhhHHHHHHHHHHhcCC--CCHHHHHHHHHH
Confidence            35678888888887       7788888888777665553 1466677777788888888888664  355666666666


Q ss_pred             HHHh
Q 010019          200 MALL  203 (520)
Q Consensus       200 La~l  203 (520)
                      +-.-
T Consensus       110 i~~W  113 (145)
T d1dvpa1         110 VQTW  113 (145)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443


Done!