Query 010020
Match_columns 520
No_of_seqs 225 out of 1624
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 20:05:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010020.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010020hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0165 ArgH Argininosuccinate 100.0 3E-113 6E-118 889.5 46.9 457 58-514 2-458 (459)
2 PLN02646 argininosuccinate lya 100.0 3E-107 6E-112 871.3 46.5 459 57-515 14-472 (474)
3 KOG1316 Argininosuccinate lyas 100.0 2E-107 5E-112 798.2 39.8 458 57-515 4-461 (464)
4 PRK00855 argininosuccinate lya 100.0 9E-100 2E-104 814.6 48.6 455 59-513 4-458 (459)
5 TIGR00838 argH argininosuccina 100.0 7E-100 2E-104 815.0 47.6 453 61-513 1-454 (455)
6 PRK04833 argininosuccinate lya 100.0 2.5E-99 6E-104 808.4 47.7 452 60-511 2-454 (455)
7 PRK06705 argininosuccinate lya 100.0 3.4E-97 7E-102 798.6 46.2 456 60-517 10-475 (502)
8 PRK12308 bifunctional arginino 100.0 8.3E-95 1.8E-99 802.1 48.1 457 60-516 2-459 (614)
9 cd01359 Argininosuccinate_lyas 100.0 6.2E-93 1.3E-97 758.5 45.4 431 81-512 2-434 (435)
10 PRK06389 argininosuccinate lya 100.0 3.3E-88 7.2E-93 709.0 38.4 382 60-452 2-386 (434)
11 PRK02186 argininosuccinate lya 100.0 5.2E-87 1.1E-91 767.7 45.5 439 69-517 417-860 (887)
12 PRK12273 aspA aspartate ammoni 100.0 2.3E-86 5E-91 710.3 43.3 427 32-490 5-464 (472)
13 PRK12425 fumarate hydratase; P 100.0 6.4E-86 1.4E-90 704.3 42.1 424 33-488 3-458 (464)
14 PRK13353 aspartate ammonia-lya 100.0 2.6E-85 5.7E-90 702.3 43.0 429 30-490 3-462 (473)
15 cd01357 Aspartase Aspartase. T 100.0 5.2E-84 1.1E-88 689.0 42.2 419 33-483 1-450 (450)
16 PRK00485 fumC fumarate hydrata 100.0 4.6E-84 9.9E-89 692.4 41.7 423 32-488 4-460 (464)
17 PRK08470 adenylosuccinate lyas 100.0 1.3E-83 2.8E-88 685.1 40.6 417 65-506 4-441 (442)
18 PRK14515 aspartate ammonia-lya 100.0 2.3E-83 5.1E-88 684.8 40.4 427 31-490 10-468 (479)
19 PRK07492 adenylosuccinate lyas 100.0 4.5E-83 9.7E-88 678.6 41.5 412 65-507 4-433 (435)
20 PRK08540 adenylosuccinate lyas 100.0 2.9E-83 6.3E-88 685.5 38.7 426 63-512 7-447 (449)
21 cd01597 pCLME prokaryotic 3-ca 100.0 3.6E-83 7.9E-88 683.4 39.1 422 62-507 2-436 (437)
22 PLN00134 fumarate hydratase; P 100.0 2.4E-82 5.1E-87 676.5 42.0 420 39-490 1-454 (458)
23 TIGR00979 fumC_II fumarate hyd 100.0 2.7E-82 5.8E-87 676.0 41.9 423 33-487 2-456 (458)
24 PRK07380 adenylosuccinate lyas 100.0 3.6E-82 7.8E-87 671.0 41.8 411 65-505 4-429 (431)
25 PRK06390 adenylosuccinate lyas 100.0 1.4E-82 3E-87 679.8 38.2 431 63-516 7-449 (451)
26 TIGR00928 purB adenylosuccinat 100.0 3.1E-81 6.7E-86 667.8 39.1 412 63-504 2-434 (435)
27 TIGR00839 aspA aspartate ammon 100.0 1.5E-80 3.3E-85 662.8 42.2 425 33-489 1-459 (468)
28 cd01362 Fumarase_classII Class 100.0 3.7E-80 8E-85 659.7 41.1 421 34-486 2-454 (455)
29 cd01360 Adenylsuccinate_lyase_ 100.0 9.8E-81 2.1E-85 654.0 36.0 364 70-447 4-374 (387)
30 PRK09053 3-carboxy-cis,cis-muc 100.0 3.7E-79 8E-84 654.0 42.1 420 59-509 5-447 (452)
31 cd01595 Adenylsuccinate_lyase_ 100.0 4.8E-80 1E-84 648.5 31.2 355 85-447 8-375 (381)
32 cd01596 Aspartase_like asparta 100.0 1.9E-78 4.2E-83 645.1 42.7 418 34-483 2-450 (450)
33 COG0015 PurB Adenylosuccinate 100.0 3E-77 6.5E-82 622.4 41.0 414 63-506 2-436 (438)
34 cd03302 Adenylsuccinate_lyase_ 100.0 7.8E-77 1.7E-81 632.6 39.8 402 63-486 2-432 (436)
35 cd01334 Lyase_I Lyase class I 100.0 1.7E-75 3.7E-80 602.5 32.5 321 89-409 2-325 (325)
36 PRK09285 adenylosuccinate lyas 100.0 2.5E-71 5.5E-76 590.8 36.4 408 60-505 10-455 (456)
37 COG1027 AspA Aspartate ammonia 100.0 4.7E-71 1E-75 552.0 34.7 427 32-490 4-463 (471)
38 COG0114 FumC Fumarase [Energy 100.0 3.1E-70 6.7E-75 547.9 37.1 427 32-490 3-461 (462)
39 TIGR02426 protocat_pcaB 3-carb 100.0 5.1E-71 1.1E-75 570.4 30.1 327 63-406 3-338 (338)
40 PRK05975 3-carboxy-cis,cis-muc 100.0 1.6E-69 3.5E-74 560.7 29.2 333 58-408 7-347 (351)
41 cd01598 PurB PurB_like adenylo 100.0 2.4E-67 5.2E-72 554.8 33.8 344 86-450 9-388 (425)
42 PLN02848 adenylosuccinate lyas 100.0 1.7E-65 3.7E-70 545.3 39.6 412 61-504 14-457 (458)
43 PF00206 Lyase_1: Lyase; Inte 100.0 1.3E-67 2.8E-72 540.8 19.8 295 64-358 1-312 (312)
44 KOG1317 Fumarase [Energy produ 100.0 7.8E-58 1.7E-62 445.7 24.0 428 30-489 26-485 (487)
45 KOG2700 Adenylosuccinate lyase 100.0 1.2E-48 2.6E-53 396.9 29.7 393 96-508 40-460 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 4.5E-39 9.8E-44 315.6 25.1 208 145-399 16-230 (231)
47 PRK08937 adenylosuccinate lyas 100.0 2.8E-35 6E-40 286.7 18.9 185 298-486 22-213 (216)
48 PF14698 ASL_C2: Argininosucci 99.5 5E-14 1.1E-18 112.5 6.7 70 421-490 1-70 (70)
49 PF10397 ADSL_C: Adenylosuccin 99.0 8E-10 1.7E-14 91.0 6.5 80 419-506 1-81 (81)
50 PF08328 ASL_C: Adenylosuccina 97.6 0.0003 6.5E-09 60.8 8.6 76 373-450 2-80 (115)
51 PF10415 FumaraseC_C: Fumarase 96.8 0.002 4.3E-08 49.0 4.3 52 424-489 2-54 (55)
52 KOG2700 Adenylosuccinate lyase 94.5 0.08 1.7E-06 55.9 6.4 163 159-358 182-354 (481)
53 PF10925 DUF2680: Protein of u 79.6 11 0.00025 29.0 7.1 47 86-132 11-57 (59)
54 PF14748 P5CR_dimer: Pyrroline 32.3 1.3E+02 0.0029 25.7 5.9 41 422-462 22-66 (107)
55 KOG4797 Transcriptional regula 25.7 1.9E+02 0.0041 25.1 5.4 36 168-203 55-90 (123)
56 PF01978 TrmB: Sugar-specific 24.9 58 0.0013 25.1 2.2 43 406-451 6-49 (68)
57 PRK07634 pyrroline-5-carboxyla 20.3 3.2E+02 0.0069 26.4 6.9 31 422-452 183-213 (245)
No 1
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-113 Score=889.46 Aligned_cols=457 Identities=56% Similarity=0.826 Sum_probs=450.0
Q ss_pred ccccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccC
Q 010020 58 EVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTD 137 (520)
Q Consensus 58 ~~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~ 137 (520)
.+++|||||++.+++.+..|+.+..+|++|+.++|.+++||+.||.+.|+|+++++++|.++|.+|.+++..+.|.+++.
T Consensus 2 ~~~lwggRf~~~~~~~~~~~~~Si~~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e~~~g~~~~~~~ 81 (459)
T COG0165 2 SNKLWGGRFSGGPDPLVKEFNASISFDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEEIRAGKFELDPD 81 (459)
T ss_pred CCCCCCCCccCCCcHHHHHHhccchhHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCCccCCCc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999988888999999
Q ss_pred CCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCc
Q 010020 138 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (520)
Q Consensus 138 ~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A 217 (520)
.||+|+++|++|++++|+.|+++|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+|+||||||+|+|
T Consensus 82 ~EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTHlQ~A 161 (459)
T COG0165 82 DEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTHLQRA 161 (459)
T ss_pred cccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHH
Q 010020 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297 (520)
Q Consensus 218 ~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~ 297 (520)
||+|||||+.+|++.|.||++||.++++|++.+|||+||++||++|+||+++|++|||+.+..||+|++++||+++|+++
T Consensus 162 QPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~le~l~ 241 (459)
T COG0165 162 QPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFILEFLS 241 (459)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccc
Q 010020 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 377 (520)
Q Consensus 298 ~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD 377 (520)
++++++.+|||||+|+++|+|+|||+|++|+++++|||||||||||+++|++|++++++.|.+.+++++++++|++||||
T Consensus 242 ~~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPlaYnrD 321 (459)
T COG0165 242 AAALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLAYNRD 321 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCcccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCC
Q 010020 378 LQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKEC 457 (520)
Q Consensus 378 ~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~ 457 (520)
+|++++.+++++..+..+|..+..++++|+||+++|++.+..||++||++|++||++|+|||+||++|+++|+.+.+.|+
T Consensus 322 lQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~ 401 (459)
T COG0165 322 LQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAEERGK 401 (459)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhh
Q 010020 458 QLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG 514 (520)
Q Consensus 458 ~l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~ 514 (520)
++.++..++++.+...+.+++.++++|+.+|+.|.++||++|+.|+++++++++.++
T Consensus 402 ~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~ 458 (459)
T COG0165 402 DLADLSLEELQSISPLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA 458 (459)
T ss_pred CHHhccHHHHhhhccccchHHHHHhchHHHHHHhhccCCCCHHHHHHHHHHHHHhhc
Confidence 999999999998888899999999999999999999999999999999999998875
No 2
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=2.9e-107 Score=871.25 Aligned_cols=459 Identities=79% Similarity=1.208 Sum_probs=446.5
Q ss_pred cccccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCccccc
Q 010020 57 KEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT 136 (520)
Q Consensus 57 ~~~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~ 136 (520)
+.+++||+||++++++.+..|+.+..+|+++++++|.+++||++||.++|+||++++++|.++|++|..+...++|++++
T Consensus 14 ~~~~~w~~r~~~~~~~~~~~~~~s~~~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~~~~f~~~~ 93 (474)
T PLN02646 14 KEKKLWGGRFEEGVTPAVEKFNESISFDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIEAGKFEWRP 93 (474)
T ss_pred HHhhhhcCCCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCCcCCC
Confidence 34579999999989999999999999999999999999999999999999999999999999999999887778999999
Q ss_pred CCCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCC
Q 010020 137 DREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 216 (520)
Q Consensus 137 ~~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~ 216 (520)
+.||+||++|++|++++|+.|+|||+|||||||++|+++|++|+.+..+.+.|.+|+++|.++|++|.+|+||||||+||
T Consensus 94 ~~ed~h~~iE~~L~e~~G~~g~~lH~grSrND~v~Ta~~L~lr~~l~~l~~~L~~L~~~L~~~A~~~~dtvmpGrTHlQ~ 173 (474)
T PLN02646 94 DREDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDTRLWCRDAIDVIRKRIKTLQVALVELAEKNVDLVVPGYTHLQR 173 (474)
T ss_pred CCCchHHHHHHHHHHHhchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCcc
Confidence 89999999999999999988999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHH
Q 010020 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 296 (520)
Q Consensus 217 A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~ 296 (520)
|||||||||+++|+++|.|+++||.+++++++.+|||||+++||++++||+++|++|||..|..|++||+++||+++|++
T Consensus 174 AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr~~~A~~LGf~~~~~n~~da~~~RD~~~e~~ 253 (474)
T PLN02646 174 AQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVLEFL 253 (474)
T ss_pred ceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCHHHHHHHhCCCCCCCChHHHHhccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 297 ~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
++++.++++|+|||+||++|+++||||+.+|+++++|||||||||||+++|.++++|+++.|+..+++.+++++|++|||
T Consensus 254 ~~la~ia~~LsRia~Dl~l~ss~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~p~~~~r 333 (474)
T PLN02646 254 FANSITAIHLSRLGEEWVLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTAYNR 333 (474)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhhHHHHHHhcCCchHhhc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcC
Q 010020 377 DLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKE 456 (520)
Q Consensus 377 D~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g 456 (520)
|+|++|..+++++..+..+|..+..++++|+||++||++++.+|++++|+++++|+++|+|||+||++|+++++.+.++|
T Consensus 334 D~q~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~Gi~fr~Ah~iV~~~v~~a~~~g 413 (474)
T PLN02646 334 DLQEDKEPLFDSVDTVSDMLEVATEFAQNITFNPERIKKSLPAGMLDATTLADYLVRKGVPFRETHHIVGAAVALAESKG 413 (474)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhh
Q 010020 457 CQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 515 (520)
Q Consensus 457 ~~l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~ 515 (520)
+++.++..+++..+...+++++.+++||+.+|++|.++|||+|+.|+++++++++.++.
T Consensus 414 ~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~~r~~~Gg~~p~~v~~~~~~~~~~l~~ 472 (474)
T PLN02646 414 CELSDLTLEDLKSINPVFEEDVYEVLGVENSVEKFDSYGSTGSRSVLEQLEKWRTKLEI 472 (474)
T ss_pred CCHHHHHHHHHHHhcccchHHHHHhCCHHHHHHHccCCCCCCHHHHHHHHHHHHHHhhc
Confidence 99999999888887777888999999999999999999999999999999999988754
No 3
>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-107 Score=798.18 Aligned_cols=458 Identities=52% Similarity=0.781 Sum_probs=449.7
Q ss_pred cccccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCccccc
Q 010020 57 KEVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT 136 (520)
Q Consensus 57 ~~~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~ 136 (520)
...++|||||++.+++.++.|+.++.+|+.||..|+.+++|+|+++.+.|+|+.++.++|.+++++|..++..+.|.+.|
T Consensus 4 ~~~KlWGGRFtg~~dp~m~~fn~Si~ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~ew~~~kf~~~p 83 (464)
T KOG1316|consen 4 SSQKLWGGRFTGAVDPLMEKFNASIPYDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRREWAAGKFKLNP 83 (464)
T ss_pred cchhhhccccCCCCCHHHHHhhccCccchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCceEeCC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCC
Q 010020 137 DREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 216 (520)
Q Consensus 137 ~~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~ 216 (520)
..||||++.|++|.|.+|+.++++|+||||||+|.|.+|||+|++++.+.-.+..|++++.++|+.+.|++||||||+|.
T Consensus 84 ~dEDvHtanErrL~eliG~~agKlHTgRSRNDQV~TDlRLw~r~~i~~~~~~l~~L~~~~v~rAe~~~dvlmpGYTHLQR 163 (464)
T KOG1316|consen 84 NDEDVHTANERRLTELIGEIAGKLHTGRSRNDQVVTDLRLWLRDAIDTILGLLWNLIRVLVDRAEAELDVLMPGYTHLQR 163 (464)
T ss_pred CchhhhhHHHHHHHHHHhhhhhhcccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCeeccChhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHH
Q 010020 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 296 (520)
Q Consensus 217 A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~ 296 (520)
|||+.|.||+..++..|.||..||.+++.|+|.+|||+||++|+++++||+++++.|||+.+..||++++++||+++||.
T Consensus 164 AQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~~la~~LgF~~v~~NSm~AvsDRDFVvef~ 243 (464)
T KOG1316|consen 164 AQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDREFLAEELGFEGVIMNSMDAVSDRDFVVEFL 243 (464)
T ss_pred ccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHHHHHHhcCCcccchhhhhccccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 297 ~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
+|.++++.+|+|+|+|+++|++.|||+|.+.+++.+|||+||||+||+.+|++|+++++|.|.++++++..+++|+.||+
T Consensus 244 fw~sm~m~HlSRlaEdlIiy~t~EF~Fv~lSDaySTGSSlMPQKKNpDslELlRgksgrV~gdl~g~lmt~KG~PstYnk 323 (464)
T KOG1316|consen 244 FWASMVMTHLSRLAEDLIIYSTKEFGFVTLSDAYSTGSSLMPQKKNPDSLELLRGKSGRVFGDLTGLLMTLKGLPSTYNK 323 (464)
T ss_pred HHHHHHHHHHHHHhhHhheeeccccCceeeccccccCcccCCCCCCCCHHHHhccccceehhhhHHHHHHhcCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcC
Q 010020 377 DLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKE 456 (520)
Q Consensus 377 D~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g 456 (520)
|+|++++++++++.++..+++....++++|+||+++|++.+.. .++||++|+|||+||+|||++|++++++|..|++.|
T Consensus 324 DlQeDKep~Fds~~tv~~~l~v~tgv~stltvn~e~m~~aLt~-dmlATdlA~YLVrKGvPFRqtHhisG~~V~~ae~rg 402 (464)
T KOG1316|consen 324 DLQEDKEPLFDSSKTVSDSLQVATGVISTLTVNQENMEKALTP-DMLATDLAYYLVRKGVPFRQTHHISGKAVRMAEERG 402 (464)
T ss_pred chhhhhhHHHhhHHHHHHHHHHHHHHhhheeECHHHHhhccCc-hhhHhHHHHHHHHcCCCchhhhhhhHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999977 467999999999999999999999999999999999
Q ss_pred CChhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhh
Q 010020 457 CQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI 515 (520)
Q Consensus 457 ~~l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~ 515 (520)
.++.++.+++++.+++.+++|+...++.+++|++|.++||++...|.+++..++..+..
T Consensus 403 ~~l~~LsledlqklsplF~eDv~~v~~ye~sVek~~a~GgTa~s~V~eQl~~~k~al~~ 461 (464)
T KOG1316|consen 403 VTLDKLSLEDLQKLSPLFEEDVFCVFNYENSVEKRCAIGGTAKSCVLEQLRQLKKALLQ 461 (464)
T ss_pred CCcccCCHHHHhhcCcccccchHHhhchhhhHHHhhccCCchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999977654
No 4
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=8.6e-100 Score=814.56 Aligned_cols=455 Identities=56% Similarity=0.840 Sum_probs=440.4
Q ss_pred cccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCC
Q 010020 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (520)
Q Consensus 59 ~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~ 138 (520)
+++||+||++++.+.+.+|..+..+|++++++++.+++||+.||.++|+||++++++|.++|+++..+...+.|++++.+
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~~~~~~~~~~~ 83 (459)
T PRK00855 4 NKLWGGRFSEGPDELVERFTASISFDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIEAGKFEFSPEL 83 (459)
T ss_pred ccccccCCCcchHHHHHHcccCccchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCcccCCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999888777899999999
Q ss_pred CchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcc
Q 010020 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (520)
Q Consensus 139 ~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~ 218 (520)
||+|+++|+++.+.+|+.|+|||+|+||||+++|+++|++|+++..+.+.|.+++++|.++|++|++|+||||||+||||
T Consensus 84 ~d~~~~ie~~l~~~~g~~g~~iH~g~SrnD~~~Ta~~L~~r~~l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~ 163 (459)
T PRK00855 84 EDIHMAIEARLTERIGDVGGKLHTGRSRNDQVATDLRLYLRDEIDEIAELLLELQKALLDLAEEHADTIMPGYTHLQRAQ 163 (459)
T ss_pred CcHHHHHHHHHHHHhccccCcccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccce
Confidence 99999999999999998889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHH
Q 010020 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (520)
Q Consensus 219 P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~ 298 (520)
|||||||+++|+++|.|+++||.+++++++.+||||++++||++++||+++|++|||..+..|+++|+++||++++++++
T Consensus 164 P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~ 243 (459)
T PRK00855 164 PVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDRERTAELLGFDGVTENSLDAVSDRDFALEFLSA 243 (459)
T ss_pred eecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCHHHHHHHcCCCCCCCCHHHHHHccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccc
Q 010020 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (520)
Q Consensus 299 la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~ 378 (520)
++.++++|+|||+||++|+++|||||++|+.+++|||||||||||+.+|.++++|.++.|++.+++.+++++|++|+||+
T Consensus 244 l~~la~~L~ria~Dl~l~ss~e~gei~~p~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~ 323 (459)
T PRK00855 244 ASLLMVHLSRLAEELILWSSQEFGFVELPDAFSTGSSIMPQKKNPDVAELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDL 323 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCeEeCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhh
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCC
Q 010020 379 QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQ 458 (520)
Q Consensus 379 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~ 458 (520)
+++|..+++++..+..++..+..++++|+||+++|++++..+++++|++++.|+++|+|||+||++|+++++++.++|++
T Consensus 324 ~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~~m~~~l~~~~~~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~~~g~~ 403 (459)
T PRK00855 324 QEDKEPLFDAVDTLKLSLEAMAGMLETLTVNKERMREAAGKGFSTATDLADYLVRKGVPFREAHEIVGKAVREAEERGVD 403 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHh
Q 010020 459 LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 513 (520)
Q Consensus 459 l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l 513 (520)
+.++..+.+..+...+++++.+++||+.+|+.|.+.|||+|+.+++++++.+..+
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~~Gg~~~~~~~~~~~~~~~~~ 458 (459)
T PRK00855 404 LADLSLEELQAFSPLITEDVYEVLTPEGSVAARNSIGGTAPEQVREQIARAKARL 458 (459)
T ss_pred HHHHhHHHHHHhcccchHHHHHHhChHHHHHhcCCCCCCCHHHHHHHHHHHHhhc
Confidence 9999988776665556778889999999999999999999999999999887765
No 5
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=7e-100 Score=814.95 Aligned_cols=453 Identities=50% Similarity=0.785 Sum_probs=436.7
Q ss_pred cccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCc
Q 010020 61 LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDRED 140 (520)
Q Consensus 61 ~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~d 140 (520)
+|++||++++++.+..|+.+..+|++++++++.+++||++||.++|+||++.+++|.++|+++..+...++|++++..||
T Consensus 1 ~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~d 80 (455)
T TIGR00838 1 LWGGRFTGGMDPRVAKFNASLSFDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGREGPFILDPDDED 80 (455)
T ss_pred CCCccCCCCccHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcccCCcCCCCCcCc
Confidence 59999998899989999999999999999999999999999999999999999999999999998876678998888999
Q ss_pred hhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccc
Q 010020 141 VHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP 219 (520)
Q Consensus 141 v~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P 219 (520)
+||++|+++.+.+| +.|+|||+|+||||+++|+++|++|+.+..+.+.|..++++|.++|++|++++||||||+|||||
T Consensus 81 ~~~~ie~~l~e~~g~~~g~~iH~g~SrnD~~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P 160 (455)
T TIGR00838 81 IHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLRDHVLELAEALLDLQDALIELAEKHVETLMPGYTHLQRAQP 160 (455)
T ss_pred HHHHHHHHHHHHhCCCccCCccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccccccee
Confidence 99999999999999 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHH
Q 010020 220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSAN 299 (520)
Q Consensus 220 ~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~l 299 (520)
||||||+++|+++|.|+++||.+++++++.+|||||+++||++++||+++|+.|||+.+..|+++|+++||+++++++++
T Consensus 161 ~T~G~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~~~~l 240 (455)
T TIGR00838 161 ITLAHHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDREYLAELLGFDAVTENSLDAVSDRDFILELLFVA 240 (455)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCHHHHHHHcCCCCCcCCHHHHHhCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccc
Q 010020 300 SIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ 379 (520)
Q Consensus 300 a~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~ 379 (520)
+.++++|+|||+||++|+++|||||++|+.+++|||||||||||+.+|.++++|+++.|+..+++.+.+++|++||||.+
T Consensus 241 ~~~a~~L~ria~Dl~l~ss~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~~ 320 (455)
T TIGR00838 241 ALIMVHLSRFAEDLILWSTGEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPLAYNRDLQ 320 (455)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCChHhhhhhH
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCCh
Q 010020 380 EDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQL 459 (520)
Q Consensus 380 ~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l 459 (520)
+++..+++++..+..++..+..++++|+||+++|++++..+++++|++++.|+++|+|||+||++|+++++.+.++|+++
T Consensus 321 ~~~~~l~~~~~~~~~al~~~~~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~~~a~~~g~~l 400 (455)
T TIGR00838 321 EDKEPLFDALKTVELSLEMATGMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELVATAIERGKGL 400 (455)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHh
Q 010020 460 QDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL 513 (520)
Q Consensus 460 ~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l 513 (520)
.++..++...+...+++++.+++||+.++++|.++|||+|+.|++++++.+..+
T Consensus 401 ~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~Gg~~~~~~~~~~~~~~~~~ 454 (455)
T TIGR00838 401 EELTLEELQKFSPEFDEDVYEALDPESSVEKRDAKGGTAPEEVLQAIAEAKARL 454 (455)
T ss_pred HHHHHHHHhhhcccCHHHHHHHCCHHHHHHhccCCCCCCHHHHHHHHHHHHHhc
Confidence 999887654355566778999999999999999999999999999999887754
No 6
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.5e-99 Score=808.35 Aligned_cols=452 Identities=44% Similarity=0.717 Sum_probs=432.2
Q ss_pred ccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcC-CcccccCC
Q 010020 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAG-KFMWRTDR 138 (520)
Q Consensus 60 ~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~-~~~~~~~~ 138 (520)
.+|++||+.++++....|+++..+|+++.++++++.+||++||+++|+||++++++|.++|+++.++...+ .+.+++..
T Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~ 81 (455)
T PRK04833 2 ALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEVRANPQQILASDA 81 (455)
T ss_pred cCcccccCCcchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhhhcCCcccCCCCC
Confidence 47999999877899999999999999999999999999999999999999999999999999997653222 45567789
Q ss_pred CchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcc
Q 010020 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (520)
Q Consensus 139 ~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~ 218 (520)
+|+|.+++++|.+++|+.|+|||+|+||||+++|+++|++|+++..+.+.|..++++|.++|++|++|+||||||+||||
T Consensus 82 edv~~~ie~~L~~~~g~~g~~lH~grSrnD~~~Ta~rl~~r~~l~~l~~~l~~l~~~L~~~A~~~~~tvm~GrTH~Q~Aq 161 (455)
T PRK04833 82 EDIHSWVEGKLIDKVGDLGKKLHTGRSRNDQVATDLKLWCKDQVAELLTALRQLQSALVETAENNQDAVMPGYTHLQRAQ 161 (455)
T ss_pred chHHHHHHHHHHHHhccccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeccccCccce
Confidence 99999999999999998899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHH
Q 010020 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (520)
Q Consensus 219 P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~ 298 (520)
|||||||+++|+++|.|+.+||.+++++++.+||||||++||++++||+++|++|||+.|..|+++++++||++++++++
T Consensus 162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr~~~a~~LGf~~~~~n~~~a~~~rd~~~e~~~~ 241 (455)
T PRK04833 162 PVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSD 241 (455)
T ss_pred eccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCHHHHHHHhCCCCCCCCHHHHHhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccc
Q 010020 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (520)
Q Consensus 299 la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~ 378 (520)
++.++++|+|||+|+++|+|+|||++++++++++|||||||||||+.+|+++++|+++.|.+++++.+++++|++||||+
T Consensus 242 l~~~a~~L~ria~Dl~l~ss~e~g~~el~~~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~ 321 (455)
T PRK04833 242 ASISMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDM 321 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCceeeCCCCCCCcccCCCCCCChHHHHHHHHHHHHHhhHHHHHHHHhCChHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCC
Q 010020 379 QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQ 458 (520)
Q Consensus 379 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~ 458 (520)
|+.+..+++++..+..++..+..++++|+||++||++++.+|+++++++++.|+++|+|||+||++|+++++.+.++|++
T Consensus 322 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~~~~~~ 401 (455)
T PRK04833 322 QEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKP 401 (455)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhCeECHHHHHHHHHccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHH
Q 010020 459 LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVA 511 (520)
Q Consensus 459 l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~ 511 (520)
+.++..+.+..+...+++++.+++||+++|+.|.++|||+|+.|.++++++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~l~p~~~v~~r~~~Gg~~~~~v~~~~~~~~~ 454 (455)
T PRK04833 402 LEDLPLAELQKFSSVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAAAKA 454 (455)
T ss_pred hhhcCHHHHHHhcccchHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHhh
Confidence 99999888776666678889999999999999999999999999999988764
No 7
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.4e-97 Score=798.63 Aligned_cols=456 Identities=24% Similarity=0.383 Sum_probs=424.6
Q ss_pred ccccCCCcccHHHHHHhcccchhccH-HHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCC
Q 010020 60 KLWGGRFEESVTDAVEKFTESISYDK-ALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDR 138 (520)
Q Consensus 60 ~~~g~r~~~~~~~~~~~f~~~~~~~~-~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~ 138 (520)
.+||+||++++.+.+. |..+..++. ..+...+.+++||+.||+++|+||++++++|.++++++.+ ...+.+.+.+.+
T Consensus 10 ~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~-~~~~~l~~~~~~ 87 (502)
T PRK06705 10 KSEGADFPGKTYVDCV-LQHVFNFQRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEE-IPEEQLLYTEQH 87 (502)
T ss_pred HHhcccCCCCcchhHH-hhcccchhHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhh-cccCccccCCCC
Confidence 5799999988887777 888887765 4455666799999999999999999999999999998743 355777777889
Q ss_pred CchhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCc
Q 010020 139 EDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (520)
Q Consensus 139 ~dv~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A 217 (520)
||+|+++|..+.+..| +.|+|+|+|+|||||++|+++|++|+++..+...|..++++|.++|++|+||+||||||+|||
T Consensus 88 edv~~~ie~~l~~~~G~~~g~~lH~GrSrnD~v~Ta~~L~lr~~l~~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~A 167 (502)
T PRK06705 88 EDLFFLVEHLISQEAKSDFVSNMHIGRSRNDMGVTMYRMSLRRYVLRLMEHHLLLQESILQLAADHKETIMPAYTHTQPA 167 (502)
T ss_pred CchHHHHHHHHHHhcCchhhccccCCCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEecccCCccc
Confidence 9999999999999998 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHH
Q 010020 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297 (520)
Q Consensus 218 ~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~ 297 (520)
||||||||+++|+++|.||++||.+++++++.+||||||++|+++|+||+++|++|||+.|..|+++++++||+++|+++
T Consensus 168 qP~T~G~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~~r~~~a~~LGf~~~~~ns~~a~~~rD~~~e~~~ 247 (502)
T PRK06705 168 QPTTFGHYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPIKRERVADLLGFTNVIENSYDAVAGADYLLEVSS 247 (502)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchHHHHHHHHHcCCCCCcCCHHHHHhccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998899888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccc
Q 010020 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 377 (520)
Q Consensus 298 ~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD 377 (520)
++++++++|+|||+||++|+++|||+|++|+++++|||||||||||+++|+||++++++.|++++++.+++++|..|++|
T Consensus 248 ~la~~~~~L~Ria~Dl~~~ss~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~~~~~~~d 327 (502)
T PRK06705 248 LLMVMMTNTSRWIHDFLLLATKEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPFGDIVD 327 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-cccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHc-CCChhhHHHHHHHHHHHHHHc
Q 010020 378 LQED-KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVPFRTSHDIVGKAVALCVSK 455 (520)
Q Consensus 378 ~~~~-~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~-G~~fr~Ah~~v~~~v~~a~~~ 455 (520)
+|.+ +..+++++..+..++..+..++++|+||++||++|+..|++++|+++++|+++ |+|||+||++|+++++.+.++
T Consensus 328 ~q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV~~~v~~a~~~ 407 (502)
T PRK06705 328 TEDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAASVIANMSLEQ 407 (502)
T ss_pred hHhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 8766 67788888888888999999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCChhHhhHHHHhh-----cCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhhhc
Q 010020 456 ECQLQDLSLDEMRS-----LNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 517 (520)
Q Consensus 456 g~~l~el~~~~~~~-----~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~~~ 517 (520)
|+++.++..++... +...+ ++++..++||+.++..|.++|||+|+.|+++++.+++.+++++
T Consensus 408 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~Gg~~p~~v~~~~~~~~~~~~~~~ 475 (502)
T PRK06705 408 KKELHELCFKDVNIYLQEKFKIQLLEKEWEEIISPEAFIQKRNVYGGPSKKEMERMINNRKELFRKEE 475 (502)
T ss_pred CCCHHHhhHHHHHhhhhhhhhhcCCHHHHHHHCCHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999988775432 21223 5678999999999999999999999999999999998887654
No 8
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=8.3e-95 Score=802.05 Aligned_cols=457 Identities=43% Similarity=0.724 Sum_probs=437.1
Q ss_pred ccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcC-CcccccCC
Q 010020 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAG-KFMWRTDR 138 (520)
Q Consensus 60 ~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~-~~~~~~~~ 138 (520)
.+|++||+.++++.+..|+++..+++++..+++.+++||++||++.|+||++++++|.++++++..+...+ .+...+..
T Consensus 2 ~~~~~r~~~~~~~~~~~~~~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~~~~~~~~~~~ 81 (614)
T PRK12308 2 ALWGGRFSQAADTRFKQFNDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVMEDPEQILLSDA 81 (614)
T ss_pred cccccCCCCcccHHHHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence 47999999889998999999999999999999999999999999999999999999999999986543222 45566779
Q ss_pred CchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcc
Q 010020 139 EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (520)
Q Consensus 139 ~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~ 218 (520)
+|+|.+++++|++.+|+.|+|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|++|+||||||+||||
T Consensus 82 ed~h~~ie~~L~~~~g~~~~~iH~g~S~nD~~~Ta~~L~~r~~~~~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A~ 161 (614)
T PRK12308 82 EDIHSWVEQQLIGKVGDLGKKLHTGRSRNDQVATDLKLWCRQQGQQLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRAQ 161 (614)
T ss_pred ccHHHHHHHHHHHHhcccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCcCCcccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHH
Q 010020 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (520)
Q Consensus 219 P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~ 298 (520)
|+|||||+++|+++|.|+++||.+++++++.+|||||+++||++|++|+++|+.|||..|..|++||+++||+++|++++
T Consensus 162 P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r~~~a~~LG~~~~~~n~~da~~~rd~~~e~~~~ 241 (614)
T PRK12308 162 PVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDREALAHNLGFRRATRNSLDSVSDRDHVMELMSV 241 (614)
T ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCHHHHHHHhCCCCCcCCHHHHHcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccc
Q 010020 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 378 (520)
Q Consensus 299 la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~ 378 (520)
++.++++|+|||+||++|+|+|||++++++++++|||||||||||+.+|.++++++++.|++++++.+++++|++||||+
T Consensus 242 l~~~~~~l~ria~Dl~~~ss~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rd~ 321 (614)
T PRK12308 242 ASISMLHLSRLAEDLIFYNSGESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMTVKALPLAYNKDM 321 (614)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHHHcCCchhhccch
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCC
Q 010020 379 QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQ 458 (520)
Q Consensus 379 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~ 458 (520)
|+.|..+++++..+..++..+..++++|+||++||++|+.+|+++++++++.|+++|+|||+||++|+++++.+.++|++
T Consensus 322 ~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~~v~~~v~~a~~~g~~ 401 (614)
T PRK12308 322 QEDKEGLFDALDTWNDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHHIVGVAVVGAIAKGCA 401 (614)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhhh
Q 010020 459 LQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN 516 (520)
Q Consensus 459 l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~~ 516 (520)
+.++..+++..+...+++++.+++||+.++++|...||++|+.|++++.++++.+++.
T Consensus 402 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~v~~~~~~~~~~l~~~ 459 (614)
T PRK12308 402 LEELSLEQLKEFSDVIEDDVYQILTIESCLEKRCALGGVSPEQVAYAVEQADKRLAAR 459 (614)
T ss_pred hhhCCHHHHHHhhhhhhHHHHHhCCHHHHHHhccCCCCCCHHHHHHHHHHHHHHhcCC
Confidence 9999988766676777888999999999999999999999999999999999988764
No 9
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=6.2e-93 Score=758.51 Aligned_cols=431 Identities=53% Similarity=0.809 Sum_probs=410.7
Q ss_pred hhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCchhhhHHHHHHHHhCCCCCcc
Q 010020 81 ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEPAKKL 160 (520)
Q Consensus 81 ~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~e~~g~~g~~l 160 (520)
..+|+.++++++.+++||++||.++|+||++.+++|.++|+++..++..+.|+.++..+|+|+++|++|++++|+.|+||
T Consensus 2 ~~~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~g~~~~~i 81 (435)
T cd01359 2 ISFDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAEIEAGAFELDPEDEDIHMAIERRLIERIGDVGGKL 81 (435)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcccCCccCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 35678889999999999999999999999999999999999998766678888888899999999999999999888999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHH
Q 010020 161 HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRL 240 (520)
Q Consensus 161 H~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL 240 (520)
|+|+||||+++|+++|++|+++..+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||
T Consensus 82 H~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G~~~~~~~~~l~r~~~rL 161 (435)
T cd01359 82 HTGRSRNDQVATDLRLYLRDALLELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFGHYLLAYAEMLERDLERL 161 (435)
T ss_pred hccCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 010020 241 QDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE 320 (520)
Q Consensus 241 ~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e 320 (520)
.+++++++.+||||++++||++++|++++|++|||+.+..|+++++++||++++++++++.++++|+|||+|+++|+++|
T Consensus 162 ~~~~~~~~~~~lGgaag~gt~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l~~~a~~l~ria~Dl~l~~~~e 241 (435)
T cd01359 162 ADAYKRVNVSPLGAGALAGTTFPIDRERTAELLGFDGPTENSLDAVSDRDFVLEFLSAAALLMVHLSRLAEDLILWSTQE 241 (435)
T ss_pred HHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999998899999999999999999998888888889999999999999999999999999999999999
Q ss_pred cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH
Q 010020 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA 400 (520)
Q Consensus 321 ~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~ 400 (520)
||||.+|+++++|||||||||||+.+|+++++++++.|...+++.++.++|.+|+||++.+|..+++++..+..++..+.
T Consensus 242 ~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~al~~~~ 321 (435)
T cd01359 242 FGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPLAYNKDLQEDKEPLFDAVDTLIASLRLLT 321 (435)
T ss_pred CCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCCccchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 99999999888999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHhhcccCHHHHHHhcccChhHHHHHHHHHHH-cCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCC-ChHHH
Q 010020 401 EFAQNITFNVERIKKALPAGYLDATTLADYLVN-KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPV-FDKDV 478 (520)
Q Consensus 401 ~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~-~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~-~~~~~ 478 (520)
.++++|+||+++|++++.++++++|++++.|++ +|+|||+||++|+++++++.++|+++.++..++.. +... .++++
T Consensus 322 ~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~-~~~~l~~~~l 400 (435)
T cd01359 322 GVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRAVRLAEEKGKDLSDLTLAELQ-AISPLFEEDV 400 (435)
T ss_pred HHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCCChhhcCHHHHH-hhcccCHHHH
Confidence 999999999999999999999999999999999 69999999999999999999999999999887643 3333 36778
Q ss_pred HhccChhHhhhhcccCCCccHHHHHHHHHHHHHH
Q 010020 479 YEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 512 (520)
Q Consensus 479 ~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~ 512 (520)
..++||++++..|.++||++|+.|++++++++..
T Consensus 401 ~~~ldp~~~~~~r~~~Gg~~~~~~~~~~~~~~~~ 434 (435)
T cd01359 401 REALDPENSVERRTSYGGTAPAEVREQIARARAL 434 (435)
T ss_pred HHhCCHHHHHHhccCCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999888764
No 10
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=3.3e-88 Score=708.97 Aligned_cols=382 Identities=25% Similarity=0.323 Sum_probs=362.2
Q ss_pred ccccCCCcccHH-HHHHhc-ccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccC
Q 010020 60 KLWGGRFEESVT-DAVEKF-TESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTD 137 (520)
Q Consensus 60 ~~~g~r~~~~~~-~~~~~f-~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~ 137 (520)
++|+|||+++++ +.++.| +.+..+|++++++++.+++||++||.+.||||++++.+|.++|+++.+ ++|++++.
T Consensus 2 klw~gr~~~~~~~~~~~~~~~~s~~~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~----~~~~~~~~ 77 (434)
T PRK06389 2 KIWSGGAGEELENDFYDNIVKDDIDADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYK----NGIEIDLD 77 (434)
T ss_pred CCcccccCCCCchHHHHHHHCCCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc----CCCcCCCC
Confidence 589999999888 778888 899999999999999999999999999999999999999999999965 67889899
Q ss_pred CCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCc
Q 010020 138 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (520)
Q Consensus 138 ~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A 217 (520)
.||+|+++|++|++++|+.|+++|+||||||++.|++||++|+.+..+...+..++++|+++ |.||+||||||+|||
T Consensus 78 ~EDvh~~iE~~L~~~~G~~gg~lhtgRSRNDqvat~~RL~~r~~~~~~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~A 154 (434)
T PRK06389 78 LEDVHTAIENFVIRRCGDMFKNFRLFLSRNEQVHADLNLFIIDKIIEIEKILYEIIKVIPGF---NLKGRLPGYTHFRQA 154 (434)
T ss_pred CCchHHHHHHHHHHHhchhhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCceeccccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999965 999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHH-HHHHH
Q 010020 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDF-VLEFL 296 (520)
Q Consensus 218 ~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~-~~e~~ 296 (520)
||+|||||+++|+++|.|+++||.+++++++.+|||+|+++||.+++||+++|++|||+.+..|++++..++|+ +++++
T Consensus 155 qP~TfG~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr~~~A~lLGf~~~~~n~~~a~~~~~~~~~e~~ 234 (434)
T PRK06389 155 MPMTVNTYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKFNQMSELLGMEKNIKNPVYSSSLYIKTIENIS 234 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhHHHHHHHhCCCCCCCCCchhhhccchHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999988888877666655 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 297 ~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
++++.++.+|+|||+|+++|+|+ |++++|+.+++|||||||||||+.+|.++++|+++.|.+++++...+|+|++|+|
T Consensus 235 ~~la~la~~LsRiA~Dl~l~ss~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~~~y~~ 312 (434)
T PRK06389 235 YLISSLAVDLSRICQDIIIYYEN--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKTTGYHR 312 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhH
Confidence 99999999999999999999997 7888999899999999999999999999999999999999999999999999999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHH
Q 010020 377 DLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALC 452 (520)
Q Consensus 377 D~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a 452 (520)
|+|+.+..++++++.+..++..+..++++++||+++ ++...+++ +||++|+.++++|+|||+||++|+++|+.+
T Consensus 313 D~q~~~~~~~~~~~~~~~~l~l~~~~i~~l~~~~~~-~~a~~~~~-~ATdlA~~lv~~GipFR~AH~~Vg~~V~~~ 386 (434)
T PRK06389 313 DFQIVKDSTISFINNFERILLGLPDLLYNIKFEITN-EKNIKNSV-YATYNAWLAFKNGMDWKSAYAYIGNKIREG 386 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeECHHH-HhhccCCC-cHHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999 55555554 599999988888999999999999999864
No 11
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=5.2e-87 Score=767.72 Aligned_cols=439 Identities=29% Similarity=0.363 Sum_probs=404.6
Q ss_pred cHHHHHHhcccc--hhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCchhhhHH
Q 010020 69 SVTDAVEKFTES--ISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIE 146 (520)
Q Consensus 69 ~~~~~~~~f~~~--~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie 146 (520)
.+.++...|... ..-+...+++++.++.||++||+++|+||++++++|.+++.++... ....+...+..+|+|+++|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~-~~~~~~~~~~~~~~~~~~e 495 (887)
T PRK02186 417 LPPEAQAIVYGPGASEAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDA-GFAPLLARPAPRGLYMLYE 495 (887)
T ss_pred CChhhhceecCCCcchhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHh-HHhhCcCCCCCcchHHHHH
Confidence 467888888732 2334577889999999999999999999999999999999888543 3347777777899999999
Q ss_pred HHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHH
Q 010020 147 AALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHL 225 (520)
Q Consensus 147 ~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~ 225 (520)
++|++++| +.|+|+|+|||||||++|+++|++|+++..+.+.|..|+++|.++|++|+||+||||||+|||||||||||
T Consensus 496 ~~L~~~~g~~~~~~lH~grSrnD~v~T~~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~m~g~TH~Q~A~P~T~G~~ 575 (887)
T PRK02186 496 AYLIERLGEDVGGVLQTARSRNDINATTTKLHLREATSRAFDALWRLRRALVFKASANVDCALPIYSQYQPALPGSLGHY 575 (887)
T ss_pred HHHHHHhChhhhcccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEeecCccCCccccccHHHH
Confidence 99999999 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHH
Q 010020 226 LLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIH 305 (520)
Q Consensus 226 la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~ 305 (520)
+++|+++|.||++||.+++++++.+||||||++||++++||+++|++|||+.|..|+++|+++||+++|+++++++++++
T Consensus 576 ~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~~~~a~~LGf~~~~~n~~da~~~rd~~~e~~~~l~~~~~~ 655 (887)
T PRK02186 576 LLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDPEFVARLLGFEQPAPNSLDAVASRDGVLHFLSAMAAISTV 655 (887)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCHHHHHHHcCCCCCccCHHHHHcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccc-ccccccc
Q 010020 306 LSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD-LQEDKEP 384 (520)
Q Consensus 306 L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD-~~~~~~~ 384 (520)
|+|||+||++|+++|||||++|+.+++|||||||||||+.+|+++++++++.|++++++..++++|++|+.| +|++|..
T Consensus 656 l~ria~Dl~~~~~~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~ir~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (887)
T PRK02186 656 LSRLAQDLQLWTTREFALVSLPDALTGGSSMLPQKKNPFLLEFVKGRAGVVAGALASASAALGKTPFSNSFEAGSPMNGP 735 (887)
T ss_pred HHHHHHHHHHHhCCCCCcEECCCccccccCCCCCCCCCcHHHHHHHHHHHHhhHHHHHHHHHccCCcccccchhhhhHHH
Confidence 999999999999999999999998999999999999999999999999999999999998888888887777 4889999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHc-CCChhhHHHHHHHHHHHHHHcCCChhHhh
Q 010020 385 TFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVPFRTSHDIVGKAVALCVSKECQLQDLS 463 (520)
Q Consensus 385 l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~-G~~fr~Ah~~v~~~v~~a~~~g~~l~el~ 463 (520)
+++++..+..+|..+..++++|+||++||++++..++.+||+++++|+++ |+|||+||++|+++++.+.++|..+.+.+
T Consensus 736 l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~at~la~~L~~~~g~~fr~Ah~~v~~~v~~~~~~~~~~~~~~ 815 (887)
T PRK02186 736 IAQACAAIEDAAAVLVLLIDGLEADQARMRAHLEDGGVSATAVAESLVVRRSISFRSAHTQVGQAIRQSLDQGRSSADAL 815 (887)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCEECHHHHHHHHhcCcchHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCcccchH
Confidence 99999999999999999999999999999999999999999999999996 99999999999999999999998877765
Q ss_pred HHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhhhc
Q 010020 464 LDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINR 517 (520)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~~~ 517 (520)
.+.. ..+.+ ..|+.+++.|.++|||+|+.|+++++.+++.+++++
T Consensus 816 ~~~~----~~~~~-----~~~~~~~~~r~~~gg~~~~~v~~~~~~~~~~l~~~~ 860 (887)
T PRK02186 816 AALD----PQFVS-----RAPLEWARSHRFGGGPGAADLNAGLARACAALRDDE 860 (887)
T ss_pred HHhh----hhhcc-----chHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4421 11111 127778889999999999999999999998887654
No 12
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.3e-86 Score=710.35 Aligned_cols=427 Identities=24% Similarity=0.254 Sum_probs=394.6
Q ss_pred ccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hcc--HHHHHHHHHHHHHHHHHHHHcCCC
Q 010020 32 SSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYD--KALYKHDIMGSKAHASMLAKQGLI 108 (520)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~--~~l~~~~i~~~~A~a~al~e~GiI 108 (520)
-+++.|.+|..+||.+.|||+ +|.+.+.+|+.+. .+. ..++++++++++|||+||.++|+|
T Consensus 5 ~r~~~~~~~~~~~~~~~~~~~----------------~t~~~~~~f~~~~~~~~~~~~~~~~~l~ve~A~a~al~~~Gii 68 (472)
T PRK12273 5 TRIEKDLLGEREVPADAYYGI----------------HTLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLL 68 (472)
T ss_pred cccccccCCCcCCcccccchH----------------HHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 467899999999988887764 7999999998654 566 899999999999999999999999
Q ss_pred CHHhHHHHHHHHHHHHHHHhcCCcccccC----CCchhhhHHHH----HHHHhC-CCCCc--cc------CCCCchhHHH
Q 010020 109 SDSDKNSILRGLDEIERQIEAGKFMWRTD----REDVHMNIEAA----LTDIIG-EPAKK--LH------TARSRNDQVL 171 (520)
Q Consensus 109 ~~~~a~~I~~al~~i~~~~~~~~~~~~~~----~~dv~~~ie~~----l~e~~g-~~g~~--lH------~G~S~nDi~~ 171 (520)
|++++++|.++|+++..+...++|++++. ++|+||+++.. +.+.+| +.|+| || +|+||||+++
T Consensus 69 ~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~ 148 (472)
T PRK12273 69 DEEKADAIVAACDEILAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYP 148 (472)
T ss_pred CHHHHHHHHHHHHHHHhccccCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHH
Confidence 99999999999999976655567877654 89999999877 456889 66777 99 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 010020 172 TDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 251 (520)
Q Consensus 172 Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~p 251 (520)
|+++|++|+++..+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|
T Consensus 149 Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~p 228 (472)
T PRK12273 149 TAIRIALLLSLRKLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVN 228 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCccHHH-------HHHhcCCCC-CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---
Q 010020 252 LGACALAGTGLPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE--- 320 (520)
Q Consensus 252 lGg~a~~Gt~~~~~r~~-------la~~LG~~~-~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e--- 320 (520)
|||||+ ||+++++|++ +|++|||+. +..|+++++++||+++|++++++.++++|+|||+||++|+|+|
T Consensus 229 lGg~Av-GT~~~i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e 307 (472)
T PRK12273 229 LGATAI-GTGLNAPPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAG 307 (472)
T ss_pred CCccce-eCCCCCChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 999888 9999999864 699999995 6679999999999999999999999999999999999999666
Q ss_pred cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH
Q 010020 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA 400 (520)
Q Consensus 321 ~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~ 400 (520)
||||.+|+ +++|||||||||||+.+|.++++|+++.|++.+++.+++++|++|++|.++.+..+++++..+..++..+.
T Consensus 308 ~gev~lp~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (472)
T PRK12273 308 LNEINLPA-VQAGSSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACRTLR 386 (472)
T ss_pred ceEEECCC-CCCcCCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999996 89999999999999999999999999999999999998999999999998889999999999999999999
Q ss_pred H-HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHH
Q 010020 401 E-FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDV 478 (520)
Q Consensus 401 ~-~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~ 478 (520)
+ ++++|+||++||++|+..++.++++|+++| +|+.++++++.+.++|+++.++..++ ..+ ++++
T Consensus 387 ~~~l~~l~v~~erm~~~l~~~~~~~t~LA~~L---------~~~~a~~lv~~a~~~g~~l~~~~~~~-----~~l~~~el 452 (472)
T PRK12273 387 EKCIDGITANEERCREYVENSIGIVTALNPYI---------GYENAAEIAKEALETGKSVRELVLER-----GLLTEEEL 452 (472)
T ss_pred HHHHccCEECHHHHHHHHHhCCchHHHHHHHH---------HHHHHHHHHHHHHHhCCCHHHHHhhc-----CCCCHHHH
Confidence 5 999999999999999999999999999998 78888999999999999999998764 334 5779
Q ss_pred HhccChhHhhhh
Q 010020 479 YEYLGVENAIRK 490 (520)
Q Consensus 479 ~~~ldp~~~v~~ 490 (520)
.+++||+.++++
T Consensus 453 ~~~ldp~~~v~~ 464 (472)
T PRK12273 453 DDILSPENMTHP 464 (472)
T ss_pred HHHcCHHHhCCC
Confidence 999999998875
No 13
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=6.4e-86 Score=704.26 Aligned_cols=424 Identities=18% Similarity=0.217 Sum_probs=380.4
Q ss_pred cccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCCCHH
Q 010020 33 SLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLISDS 111 (520)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI~~~ 111 (520)
+.|.|++|+.+||.|+|||+ +|.+.+++|+.+. +++..++++...+++|||+||.++|+||++
T Consensus 3 r~e~d~~g~~~~p~~~~~g~----------------~t~ra~~nf~~~~~~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~ 66 (464)
T PRK12425 3 RTETDSLGPIEVPEDAYWGA----------------QTQRSLINFAIGKERMPLAVLHALALIKKAAARVNDRNGDLPAD 66 (464)
T ss_pred CcCcccCCCCCCcccccchH----------------HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 67899999999999998875 7999999999774 778999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCcc---cccC-CCchhhhH----HHHHHHHhC-CCCCc--------ccCCCCchhHHHHHH
Q 010020 112 DKNSILRGLDEIERQIEAGKFM---WRTD-REDVHMNI----EAALTDIIG-EPAKK--------LHTARSRNDQVLTDF 174 (520)
Q Consensus 112 ~a~~I~~al~~i~~~~~~~~~~---~~~~-~~dv~~~i----e~~l~e~~g-~~g~~--------lH~G~S~nDi~~Ta~ 174 (520)
.+++|.++|++|..+...++|+ |+++ +||+|||+ ++++.+++| +.|++ ||+||||||+++|++
T Consensus 67 ~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~ 146 (464)
T PRK12425 67 IARLIEQAADEVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAM 146 (464)
T ss_pred HHHHHHHHHHHHHcCcccCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHH
Confidence 9999999999999887778999 4555 99999999 456667778 57877 999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCC
Q 010020 175 RLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 253 (520)
Q Consensus 175 ~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plG 253 (520)
+|++|+++ ..+.+.|..|+++|.++|++|++|+||||||+||||||||||||++|+++|.||++||.+++++++.+|+|
T Consensus 147 ~L~~r~~l~~~l~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plG 226 (464)
T PRK12425 147 HIAAAQAVHEQLLPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQG 226 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999 59999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccHH-------HHHHhcCCCCC-CCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-C--cc
Q 010020 254 ACALAGTGLPIDRF-------MTAEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE-E--FG 322 (520)
Q Consensus 254 g~a~~Gt~~~~~r~-------~la~~LG~~~~-~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~-e--~g 322 (520)
|||+ ||++++++. .+++.|||+.+ ..|++|++++||+++|++++++.++++|+|||+||++|+|+ + ||
T Consensus 227 ggAv-GT~~~~~~~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ 305 (464)
T PRK12425 227 GTAV-GTGLNAPHGFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLA 305 (464)
T ss_pred Cchh-cCcccCCccHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCce
Confidence 9999 999999752 25788899975 78899999999999999999999999999999999999976 4 89
Q ss_pred eeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHH-HH
Q 010020 323 FITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVS-AE 401 (520)
Q Consensus 323 ev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~-~~ 401 (520)
||++|+. ++|||||||||||+++|.++++|++++|++.+++.++++.++.+|+|.+.....+++++..+..++..+ ..
T Consensus 306 ei~lp~~-~~GSSiMPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~ 384 (464)
T PRK12425 306 EVRLPAN-EPGSSIMPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQH 384 (464)
T ss_pred EEECCCC-CCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999964 999999999999999999999999999999999999987666666666665667888888888555555 58
Q ss_pred HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHh
Q 010020 402 FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYE 480 (520)
Q Consensus 402 ~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~ 480 (520)
|+++|+||++||++|+..+++++|+|++ +++|++||+ ++++|.++|+++++++.+. ..+ ++++.+
T Consensus 385 ~i~~l~vn~erm~~~l~~~~~~at~L~~-----~ig~~~A~~----ia~~a~~~g~~l~e~~~~~-----~~l~~~el~~ 450 (464)
T PRK12425 385 CVAGLEPDAEQMAAHLERGLMLVTALNP-----HIGYDKAAE----IAKKAYAEGTTLREAALAL-----GYLTDEQFDA 450 (464)
T ss_pred HHccCEECHHHHHHHHHcccHHHHHhhh-----ccCHHHHHH----HHHHHHHhCCCHHHHHHhc-----CCCCHHHHHH
Confidence 9999999999999999999998887732 478999994 5577888999999998752 333 567999
Q ss_pred ccChhHhh
Q 010020 481 YLGVENAI 488 (520)
Q Consensus 481 ~ldp~~~v 488 (520)
++||+.++
T Consensus 451 ~ldP~~~~ 458 (464)
T PRK12425 451 WVRPENML 458 (464)
T ss_pred HcCHHHhc
Confidence 99999855
No 14
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.6e-85 Score=702.30 Aligned_cols=429 Identities=23% Similarity=0.251 Sum_probs=395.2
Q ss_pred ccccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCC
Q 010020 30 LRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLI 108 (520)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI 108 (520)
+.-+.+.|.+|..+||.++|||+ +|.+.+.+|..+. +++..++++.+.+++|||+||+++|+|
T Consensus 3 ~~~r~~~d~~g~~~~~~~~~~g~----------------~t~r~~~~f~~~~~~~~~~~i~a~~~ve~A~a~~l~~~Gli 66 (473)
T PRK13353 3 KNMRIEHDLLGEKEVPAEAYYGI----------------QTLRAVENFPITGYKIHPELIRAFAQVKKAAALANADLGLL 66 (473)
T ss_pred CCcccccccCCCCCCcccccchH----------------HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 34578999999999988887765 7999999999764 788999999999999999999999999
Q ss_pred CHHhHHHHHHHHHHHHHHHhcCCcccccC----CCchhhh----HHHHHHHHhC-CCCCc--------ccCCCCchhHHH
Q 010020 109 SDSDKNSILRGLDEIERQIEAGKFMWRTD----REDVHMN----IEAALTDIIG-EPAKK--------LHTARSRNDQVL 171 (520)
Q Consensus 109 ~~~~a~~I~~al~~i~~~~~~~~~~~~~~----~~dv~~~----ie~~l~e~~g-~~g~~--------lH~G~S~nDi~~ 171 (520)
|++++++|.++|++|..+...++|++++. ++|+||| +++++.+.+| +.|+| ||+|+||||+++
T Consensus 67 p~~~a~~I~~al~~i~~~~~~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~ 146 (473)
T PRK13353 67 PRRIAEAIVQACDEILAGKLHDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFP 146 (473)
T ss_pred CHHHHHHHHHHHHHHHhccccCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHH
Confidence 99999999999999977654578887653 5799999 5677779998 56885 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 010020 172 TDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 251 (520)
Q Consensus 172 Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~p 251 (520)
|+++|++|+++..+.+.|..|+++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|
T Consensus 147 Ta~~L~~r~~l~~l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~p 226 (473)
T PRK13353 147 TAIRIAALNLLEGLLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVN 226 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCccHHH-------HHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---C
Q 010020 252 LGACALAGTGLPIDRFM-------TAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---E 320 (520)
Q Consensus 252 lGg~a~~Gt~~~~~r~~-------la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e 320 (520)
|||||+ ||++++||++ ++++|||+ .+..|+++++++||++++++++++.++++|+|||+||++|+|+ |
T Consensus 227 LGg~Av-GT~~~~~~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e 305 (473)
T PRK13353 227 LGGTAV-GTGLNADPEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTG 305 (473)
T ss_pred CCCccc-cCCccCChhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 999888 9999999865 67999999 5677999999999999999999999999999999999999976 8
Q ss_pred cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH
Q 010020 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA 400 (520)
Q Consensus 321 ~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~ 400 (520)
||||.+|+ +++|||||||||||+.+|.++++|+++.|+..+++.+++++|++|+++.+..+..++++++.+..++..+.
T Consensus 306 ~gev~lp~-~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (473)
T PRK13353 306 LGEINLPA-VQPGSSIMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFT 384 (473)
T ss_pred ceEEECCC-CCCCCCCCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999999999999999999999999999999999999999888888889999999998888888
Q ss_pred -HHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHH
Q 010020 401 -EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDV 478 (520)
Q Consensus 401 -~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~ 478 (520)
.++++|+||++||++|+..++.++++|++.| ||++|+++++.+.++|+++.++..++ ..+ ++++
T Consensus 385 ~~~l~gL~vn~erm~~~l~~~~~l~t~La~~L---------gh~~v~~~~~~a~~~g~~l~e~~~~~-----~~~~~~el 450 (473)
T PRK13353 385 DNCVKGIEANEERCKEYVEKSVGIATALNPHI---------GYEAAARIAKEAIATGRSVRELALEN-----GLLSEEEL 450 (473)
T ss_pred HHHHccCEECHHHHHHHHHhCcchHHHHHHHH---------HHHHHHHHHHHHHHhCCCHHHHHhhc-----CCCCHHHH
Confidence 7999999999999999999999999999998 79999999999999999999998764 233 6779
Q ss_pred HhccChhHhhhh
Q 010020 479 YEYLGVENAIRK 490 (520)
Q Consensus 479 ~~~ldp~~~v~~ 490 (520)
.+++||+.++++
T Consensus 451 ~~~ldp~~~v~~ 462 (473)
T PRK13353 451 DLILDPFRMTHP 462 (473)
T ss_pred HHHcCHHHhcCC
Confidence 999999987754
No 15
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=5.2e-84 Score=689.05 Aligned_cols=419 Identities=24% Similarity=0.272 Sum_probs=381.9
Q ss_pred cccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCCCHH
Q 010020 33 SLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLISDS 111 (520)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI~~~ 111 (520)
+.+.|.+|..+||.+.+||+ +|.+.+.+|+... ++|..++++++.+++|||+||+++|+||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~----------------~t~~~~~~~~~~~~~~d~~~i~~~l~ve~A~a~al~~~Giip~~ 64 (450)
T cd01357 1 RIEHDLLGEREVPADAYYGI----------------QTLRALENFPISGLKIHPELIRALAMVKKAAALANAELGLLDEE 64 (450)
T ss_pred CCCcccCCCcCCcccccchH----------------HHHHHHHcCCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 36789999999988887765 7999999999654 889999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCcccccC----CCchhhhHH----HHHHHHhC-CCCCc--------ccCCCCchhHHHHHH
Q 010020 112 DKNSILRGLDEIERQIEAGKFMWRTD----REDVHMNIE----AALTDIIG-EPAKK--------LHTARSRNDQVLTDF 174 (520)
Q Consensus 112 ~a~~I~~al~~i~~~~~~~~~~~~~~----~~dv~~~ie----~~l~e~~g-~~g~~--------lH~G~S~nDi~~Ta~ 174 (520)
++++|.++|+++..+...++|++.+. ++|+||+++ ..+.+.+| +.|+| ||+|+||||+++|++
T Consensus 65 ~a~~I~~al~~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~ 144 (450)
T cd01357 65 KAEAIVKACDEIIAGKLHDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTAL 144 (450)
T ss_pred HHHHHHHHHHHHHhccccCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHH
Confidence 99999999999976543367876543 579999877 44567789 67887 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCc
Q 010020 175 RLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGA 254 (520)
Q Consensus 175 ~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg 254 (520)
+|++|+++..+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+.+||.+++++++.+||||
T Consensus 145 ~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg 224 (450)
T cd01357 145 RLALILLLRKLLDALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGG 224 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCccHHH-------HHHhcCCCC-CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---cce
Q 010020 255 CALAGTGLPIDRFM-------TAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---FGF 323 (520)
Q Consensus 255 ~a~~Gt~~~~~r~~-------la~~LG~~~-~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e---~ge 323 (520)
||+ ||++++++++ +|++|||+. +..|+++++++||++++++++++.++++|+|||+||++|+|+| |||
T Consensus 225 ~Av-Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~ge 303 (450)
T cd01357 225 TAI-GTGINAPPGYIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGE 303 (450)
T ss_pred Cce-eCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcee
Confidence 888 9999999876 999999995 5679999999999999999999999999999999999999665 999
Q ss_pred eeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH-HH
Q 010020 324 ITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EF 402 (520)
Q Consensus 324 v~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~-~~ 402 (520)
|.+| .+++|||||||||||+.+|.++++|+++.|++.+++.+++++|++|+++.+..+..++++++.+..++..+. .+
T Consensus 304 v~~p-~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 382 (450)
T cd01357 304 INLP-AVQPGSSIMPGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELNVFEPVIAYNLLESIDILTNAVRTLRERC 382 (450)
T ss_pred EECC-CCCCcCCCCCCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 489999999999999999999999999999999997777888999999988888899999999999999995 99
Q ss_pred HhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhc
Q 010020 403 AQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEY 481 (520)
Q Consensus 403 l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ 481 (520)
+++|+||++||++|+..++.++++++++| +|+.++++++.+.++|+++.++..++ +++ ++++.++
T Consensus 383 l~~l~v~~erm~~~l~~~~~~~t~La~~l---------g~~~a~~~~~~a~~~g~~l~e~~~~~-----~~l~~~el~~~ 448 (450)
T cd01357 383 IDGITANEERCREYVENSIGIVTALNPYI---------GYEAAAEIAKEALETGRSVRELVLEE-----GLLTEEELDEI 448 (450)
T ss_pred HccCEECHHHHHHHHHhCcchHHHHHHHH---------HHHHHHHHHHHHHHhCCCHHHHHHhc-----CCCCHHHHHHH
Confidence 99999999999999999999999999998 68888889999999999999998753 444 3456666
Q ss_pred cC
Q 010020 482 LG 483 (520)
Q Consensus 482 ld 483 (520)
+|
T Consensus 449 ~~ 450 (450)
T cd01357 449 LS 450 (450)
T ss_pred hC
Confidence 54
No 16
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=4.6e-84 Score=692.43 Aligned_cols=423 Identities=22% Similarity=0.299 Sum_probs=372.9
Q ss_pred ccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccc-hhccHHHHHHHHHHHHHHHHHHHHcCCCCH
Q 010020 32 SSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISD 110 (520)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~-~~~~~~l~~~~i~~~~A~a~al~e~GiI~~ 110 (520)
-+.|.|++|+.+||.+ ++||+ ++++.+++|+.+ ..+|..++++++.+++|||+||+++|+||+
T Consensus 4 ~r~e~d~~g~~~~~~~------------~l~g~----~~~~~~~~f~~s~~~~~~~~~~~~l~ve~A~a~al~~~Giip~ 67 (464)
T PRK00485 4 TRIEKDSMGEVEVPAD------------ALWGA----QTQRSLENFPIGGERMPRELIRALALLKKAAARVNAELGLLDA 67 (464)
T ss_pred cccccccCCCcCCccc------------cccch----hhHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
Confidence 3689999999998554 46677 478899999877 789999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhcCCccccc----CCCchhhhHHHHH----HHHhC-C--------CCCcccCCCCchhHHHHH
Q 010020 111 SDKNSILRGLDEIERQIEAGKFMWRT----DREDVHMNIEAAL----TDIIG-E--------PAKKLHTARSRNDQVLTD 173 (520)
Q Consensus 111 ~~a~~I~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l----~e~~g-~--------~g~~lH~G~S~nDi~~Ta 173 (520)
+++++|.++|+++..+...++|+.++ .++|+||+++..+ .+..| + .++|||+|+|||||++|+
T Consensus 68 ~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta 147 (464)
T PRK00485 68 EKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTA 147 (464)
T ss_pred HHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCchhHHHHH
Confidence 99999999999996553457788776 6999999995433 44456 5 566777999999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCC
Q 010020 174 FRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPL 252 (520)
Q Consensus 174 ~~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~pl 252 (520)
++|++|+++ ..+.+.|.+|+++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||
T Consensus 148 ~~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pL 227 (464)
T PRK00485 148 MHIAAVLAIVERLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELAL 227 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999 7999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCccHH-------HHHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---Cc
Q 010020 253 GACALAGTGLPIDRF-------MTAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EF 321 (520)
Q Consensus 253 Gg~a~~Gt~~~~~r~-------~la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e~ 321 (520)
||||+ ||+++++|+ ++|++|||+ .+..|++|++++||+++|+++++++++++|+|||+||++|+|+ ||
T Consensus 228 Gg~Av-GT~~~~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~ 306 (464)
T PRK00485 228 GGTAV-GTGLNAHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGL 306 (464)
T ss_pred CCccc-cCCccCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 99786 999999987 499999999 7788899999999999999999999999999999999999965 69
Q ss_pred ceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccccc--ccccHHHHHHHHHHHHHHH
Q 010020 322 GFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE--DKEPTFDSVKTIVGMLEVS 399 (520)
Q Consensus 322 gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~--~~~~l~~~~~~~~~~l~~~ 399 (520)
|||.+|+. ++|||||||||||+++|.++++|+++.|++.+++....+ .+||||... ....+++++..+..++..+
T Consensus 307 gev~lp~~-~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~ 383 (464)
T PRK00485 307 GEISLPEN-EPGSSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQ--GNFELNVFKPVIAYNFLQSIRLLADAMRSF 383 (464)
T ss_pred ceEEcCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhcc--CcccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 99999984 799999999999999999999999999999999965554 477887633 2345677777788788777
Q ss_pred H-HHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHH
Q 010020 400 A-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKD 477 (520)
Q Consensus 400 ~-~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~ 477 (520)
. .++++|+||++||++|+..++.++++|++ ++||++||+ +++++.++|.++.+++.+. ..+ +++
T Consensus 384 ~~~~l~~l~v~~erm~~~l~~~~~~~t~La~-----~lg~~~A~~----~~~~a~~~g~~l~~~~~~~-----~~l~~~~ 449 (464)
T PRK00485 384 ADHCVVGIEPNRERIKELLERSLMLVTALNP-----HIGYDKAAK----IAKKAHKEGLTLKEAALEL-----GYLTEEE 449 (464)
T ss_pred HHHHHccCEECHHHHHHHHHhCCeeHHHhcc-----ccCHHHHHH----HHHHHHHcCCCHHHHHHHc-----CCCCHHH
Confidence 7 89999999999999999888887888876 489999987 6778888999999987652 333 567
Q ss_pred HHhccChhHhh
Q 010020 478 VYEYLGVENAI 488 (520)
Q Consensus 478 ~~~~ldp~~~v 488 (520)
+.+++||++++
T Consensus 450 l~~~ldP~~~~ 460 (464)
T PRK00485 450 FDRWVDPEKMT 460 (464)
T ss_pred HHHHcCHHHhc
Confidence 99999999743
No 17
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.3e-83 Score=685.09 Aligned_cols=417 Identities=19% Similarity=0.235 Sum_probs=367.6
Q ss_pred CCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHH-HHHHHHhcCCcccccCCCchhh
Q 010020 65 RFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD-EIERQIEAGKFMWRTDREDVHM 143 (520)
Q Consensus 65 r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~-~i~~~~~~~~~~~~~~~~dv~~ 143 (520)
||+ +.++...|++... +++.+.+++||++||+++|+||++++++|.+++. ++..- .+.. .+.+||+ +
T Consensus 4 ~y~--~~~~~~i~s~~~~-----~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~~---~~~~-~~~~~dv-~ 71 (442)
T PRK08470 4 RYA--REEMKKKWTMQAK-----YDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIARI---DEIE-KTTKHDL-I 71 (442)
T ss_pred ccC--cHHHHHHcCHHHH-----HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHHH---HHHH-HccCCCh-H
Confidence 775 7789999998754 5577889999999999999999999999999874 12110 0011 2458999 6
Q ss_pred hHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchH
Q 010020 144 NIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQ 223 (520)
Q Consensus 144 ~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG 223 (520)
++++.|.+.+|+.|+|||+|+|||||+||+++|++|+++..+.+.|..++++|.++|++|++||||||||+|||||||||
T Consensus 72 ~~v~~L~e~~g~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG 151 (442)
T PRK08470 72 AFLTSVSESLGEESRFVHYGMTSSDCIDTAVALQMRDSLKLIIEDVKNLMEAIKKRALEHKDTLMVGRSHGIHGEPITFG 151 (442)
T ss_pred HHHHHHHHHccccccceecCCChhchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCcCeehhHH
Confidence 78899999999889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCcc-HHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHH
Q 010020 224 HLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPID-RFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSII 302 (520)
Q Consensus 224 ~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~-r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~l 302 (520)
||+++|+++|.|+++||.+++++++.+||||+++++++++.+ ++++|++|||+.+..++ ++++||+++|++++++.+
T Consensus 152 ~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgGAvGt~a~~~~~v~~~~a~~LGl~~~~~~~--~v~~RD~~~e~~~~La~~ 229 (442)
T PRK08470 152 LVLAIWYDEIKRHLKALEHTMEVISVGKISGAMGNFAHAPLELEELVCEELGLKPAPVSN--QVIQRDRYARLASALALL 229 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCcchhcccccCChHHHHHHHHHcCCCCCCCCC--CccCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999998766555555544 78999999999654321 569999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccccc-
Q 010020 303 AIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE- 380 (520)
Q Consensus 303 a~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~- 380 (520)
+++|+|||+||++|+++||+|+..+ .++++|||||||||||+.+|+++++++.+.|.+..++ +++|++||||++.
T Consensus 230 a~~L~ria~Di~~l~~~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~---~~~~~~~eRD~~~~ 306 (442)
T PRK08470 230 ASSCEKIAVAIRHLQRTEVYEAEEYFSKGQKGSSAMPHKRNPVLSENITGLCRVIRSFATPAL---ENVALWHERDISHS 306 (442)
T ss_pred HHHHHHHHHHHHHHhccccceecccCCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHH---HhchHhhccCCchh
Confidence 9999999999999999999998765 2467999999999999999999999999999975554 5669999999875
Q ss_pred --ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhc--ccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHc-
Q 010020 381 --DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKAL--PAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSK- 455 (520)
Q Consensus 381 --~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~- 455 (520)
+|..+|+++..+..++..+..++++|+||++||++|+ ..|++++|++++.|+++|+|||+||++|++++.++.++
T Consensus 307 ~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l~~~L~~~G~~~~~Ah~~V~~~~~~a~~~~ 386 (442)
T PRK08470 307 SVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRVLLELPKKGVSREDAYKIVQRNAMKVWEDL 386 (442)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 4778999999999999999999999999999999999 46999999999999999999999999999999999988
Q ss_pred --CCC---------hhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHH
Q 010020 456 --ECQ---------LQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 506 (520)
Q Consensus 456 --g~~---------l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l 506 (520)
|++ |.+.+.++ +.+...+ ++++..++||+. |.|.++..+++++
T Consensus 387 ~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~l~~~~dp~~-------~~g~~~~~~~~~~ 441 (442)
T PRK08470 387 QQGKAAINEKGESLFLQALLND-EDLRKSLSEEEIRACFDYSY-------YTKNVDAIFKRVF 441 (442)
T ss_pred hcCCCccccccHHHHHHHHhcC-HHhHhcCCHHHHHHHhCHHH-------HHhhHHHHHHHHh
Confidence 998 88877643 3454555 456899999996 9999999998874
No 18
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=2.3e-83 Score=684.81 Aligned_cols=427 Identities=21% Similarity=0.228 Sum_probs=380.1
Q ss_pred cccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcc-cchhccHHHHHHHHHHHHHHHHHHHHcCCCC
Q 010020 31 RSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFT-ESISYDKALYKHDIMGSKAHASMLAKQGLIS 109 (520)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~-~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~ 109 (520)
.-+.|.|.+|+.+||.|+|||+ +|.+.+++|+ .+.+++++++++++.+++|||+||.++|+|+
T Consensus 10 ~~r~e~d~~g~~~~p~~~~~g~----------------~t~ra~~~f~~~~~~~~~~~i~~~~~v~~A~a~~l~~~G~l~ 73 (479)
T PRK14515 10 GVRIEKDFLGEKEVPNYAYYGV----------------QTMRAVENFPITGYKIHEGLIKAFAIVKKAAALANTDVGRLE 73 (479)
T ss_pred CCccccccCCCCCCcccccchH----------------HHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 3478999999999999998875 7999999996 4568999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhcCCcccccC--CCc--hhhh----HHHHHHHHhC-CCCCcc--------cCCCCchhHHHH
Q 010020 110 DSDKNSILRGLDEIERQIEAGKFMWRTD--RED--VHMN----IEAALTDIIG-EPAKKL--------HTARSRNDQVLT 172 (520)
Q Consensus 110 ~~~a~~I~~al~~i~~~~~~~~~~~~~~--~~d--v~~~----ie~~l~e~~g-~~g~~l--------H~G~S~nDi~~T 172 (520)
++.+++|.++|++|..+...++|++++. +++ .||| |++++.+++| +.|+|. |+||||||+++|
T Consensus 74 ~~~~~~I~~al~ei~~~~~~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~T 153 (479)
T PRK14515 74 LNKGGAIAEAAQEILDGKWHDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPT 153 (479)
T ss_pred HHHHHHHHHHHHHHHcCcccCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHH
Confidence 9999999999999998877799998763 344 6677 8999999999 568854 499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCC
Q 010020 173 DFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPL 252 (520)
Q Consensus 173 a~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~pl 252 (520)
+++|++|+.+..+.+.|..|+++|.++|++|++++||||||+||||||||||||++|+++|.|+++||.+++++++.+||
T Consensus 154 a~~L~~~~~l~~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pL 233 (479)
T PRK14515 154 AIHIATLNALEGLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNM 233 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCccHHHHH-------HhcCCCC-CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---c
Q 010020 253 GACALAGTGLPIDRFMTA-------EALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---F 321 (520)
Q Consensus 253 Gg~a~~Gt~~~~~r~~la-------~~LG~~~-~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e---~ 321 (520)
||||+ ||++++||++.+ +.+|+.. +..|+++++++||++++++++++.++++|+|||+||++|+|+| |
T Consensus 234 G~gAv-GT~~~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~ 312 (479)
T PRK14515 234 GATAV-GTGLNADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGL 312 (479)
T ss_pred CCccc-cCCCCCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCe
Confidence 99998 999999987644 4566663 3458999999999999999999999999999999999999764 4
Q ss_pred ceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccc-cccccHHHHHHHHHHHHHHHH
Q 010020 322 GFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQ-EDKEPTFDSVKTIVGMLEVSA 400 (520)
Q Consensus 322 gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~-~~~~~l~~~~~~~~~~l~~~~ 400 (520)
||+.+|+ .++|||||||||||+.+|.++++|++++|+..+++.+..+.+++++. ++ .....+++++..+..++..+.
T Consensus 313 ~Ei~lp~-~~~GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~-~~p~i~~~l~~si~~l~~al~~~~ 390 (479)
T PRK14515 313 AEIMLPA-RQPGSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNV-MEPVLVFNLLQSISIMNNGFRAFT 390 (479)
T ss_pred eEEeCCC-CCCCcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHH-hcchhHHHHHHHHHHHHHHHHHHH
Confidence 5577997 69999999999999999999999999999999999877765666655 32 224478889999999998887
Q ss_pred H-HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHH
Q 010020 401 E-FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDV 478 (520)
Q Consensus 401 ~-~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~ 478 (520)
+ |++||+||++||++|+..++.++++|++.+ +|+.|++++++|.++|++++|++.+. ..+ ++++
T Consensus 391 ~~~l~gl~vn~erm~~~l~~s~~l~t~La~~i---------G~~~v~~~a~~A~~~g~~l~e~~~~~-----~~l~~~el 456 (479)
T PRK14515 391 DNCLKGIEANEDRLKEYVEKSVGIITAVNPHI---------GYEAAARVAKEAIATGQSVRELCVKN-----GVLSQEDL 456 (479)
T ss_pred HHHHccCEECHHHHHHHHHhCccHHHHhcchh---------cHHHHHHHHHHHHHhCCCHHHHHHhc-----CCCCHHHH
Confidence 5 999999999999999999999999998855 48889999999999999999997643 333 5779
Q ss_pred HhccChhHhhhh
Q 010020 479 YEYLGVENAIRK 490 (520)
Q Consensus 479 ~~~ldp~~~v~~ 490 (520)
.+++||++++.+
T Consensus 457 ~~~ldP~~~~~~ 468 (479)
T PRK14515 457 ELILDPFEMTHP 468 (479)
T ss_pred HHhCCHHHcCCC
Confidence 999999998854
No 19
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.5e-83 Score=678.62 Aligned_cols=412 Identities=18% Similarity=0.211 Sum_probs=369.3
Q ss_pred CCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHH-------HHHHHHhcCCcccccC
Q 010020 65 RFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLD-------EIERQIEAGKFMWRTD 137 (520)
Q Consensus 65 r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~-------~i~~~~~~~~~~~~~~ 137 (520)
||+ +.++...|++..++. ..++++.|++++++++|+||++.+++|.+++. +|.+.... .
T Consensus 4 ~y~--~~~~~~i~s~~~~~~-----~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~~~d~~~~~~~~~~-------~ 69 (435)
T PRK07492 4 RYS--RPEMVAIWEPETKFR-----IWFEIEAHACEAQAELGVIPKEAAETIWEKGKDAEFDVARIDEIEAV-------T 69 (435)
T ss_pred ccC--cHHHHHHcCHHHHHH-----HHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCcccCCCHHHHHHHHHH-------h
Confidence 664 678999999886544 56677889999999999999999999988752 23322222 3
Q ss_pred CCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCc
Q 010020 138 REDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRA 217 (520)
Q Consensus 138 ~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A 217 (520)
+||+ +++++.|++.+|+.|+|||+|+|||||+||+++|++|+++..+.+.|..++++|.++|++|+||+||||||+|||
T Consensus 70 ~h~v-~a~~~~L~~~~g~~~~~vH~G~Ts~Di~dTa~~L~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A 148 (435)
T PRK07492 70 KHDV-IAFLTHLAEFVGPDARFVHQGMTSSDVLDTCLNVQLVRAADLLLADLDRVLAALKKRAFEHKDTPTIGRSHGIHA 148 (435)
T ss_pred CCCh-HHHHHHHHHHhhHhhhhhcCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEeeccCCccc
Confidence 6776 889999999999779999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccH---HHHHHhcCCCCCCCCcccc-ccchHHHH
Q 010020 218 QPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR---FMTAEALEFTAPMRNSIDA-VSDRDFVL 293 (520)
Q Consensus 218 ~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r---~~la~~LG~~~~~~n~~~~-~~~rd~~~ 293 (520)
+|||||||+++|+++|.|+++||.+++++++.+|||| |+ ||.+++|+ ++++++|||+.+. .+| +++||+++
T Consensus 149 ~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgG-Av-GT~~~~~~~~~~~~a~~LGl~~~~---~~~~v~~RD~~~ 223 (435)
T PRK07492 149 EPTTFGLKLARFYAEFARNRERLVAAREEIATCAISG-AV-GTFANIDPRVEEHVAKKLGLKPEP---VSTQVIPRDRHA 223 (435)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc-cc-cCCccCChHHHHHHHHHhCCCCCC---ccccccccHHHH
Confidence 9999999999999999999999999999999999986 54 99999998 7899999999754 355 69999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcc
Q 010020 294 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 372 (520)
Q Consensus 294 e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~ 372 (520)
+++++++.++++|+|||+||++|+++||+|+..+ .++++|||+|||||||+.+|+++++++.+.|.+.+++ +++|+
T Consensus 224 e~~~~la~~~~~L~ria~Di~~l~~~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~~~~~~~~---~~~~~ 300 (435)
T PRK07492 224 MFFATLGVIASSIERLAIEIRHLQRTEVLEAEEFFSPGQKGSSAMPHKRNPVLTENLTGLARLVRSYVVPAM---ENVAL 300 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhccccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH---Hhcch
Confidence 9999999999999999999999999999999755 3467999999999999999999999999999966554 46689
Q ss_pred ccccccc---cccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcc--cChhHHHHHHHHHHHcCCChhhHHHHHHH
Q 010020 373 AYNRDLQ---EDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDIVGK 447 (520)
Q Consensus 373 ~~erD~~---~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~Lv~~G~~fr~Ah~~v~~ 447 (520)
+||||++ .+|..+|+++..+..++..+..++++|+||++||++|+. +|++++|++++.|+++|+|||+||++|++
T Consensus 301 ~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae~~~~~L~~~g~~r~~Ah~~V~~ 380 (435)
T PRK07492 301 WHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQRVLLALTQAGVSREDAYRLVQR 380 (435)
T ss_pred hhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999986 467789999999999999999999999999999999996 69999999999999999999999999999
Q ss_pred HHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHHH
Q 010020 448 AVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLH 507 (520)
Q Consensus 448 ~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~ 507 (520)
+++.+.++|++|.+++.++ +.+...+ ++++..++||+. |.|.++..++++++
T Consensus 381 ~~~~a~~~~~~l~e~l~~~-~~~~~~l~~~el~~~~dp~~-------ylg~~~~~~~~~~~ 433 (435)
T PRK07492 381 NAMKVWEQGGDFLEELKAD-PEVRAALSEEEIEELFDLGY-------HTKHVDTIFKRVFG 433 (435)
T ss_pred HHHHHHHhCCCHHHHHhCC-HHhHhcCCHHHHHHHhCHHH-------HhcchHHHHHHHhh
Confidence 9999999999999998754 4455555 466899999995 99999999999863
No 20
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=2.9e-83 Score=685.53 Aligned_cols=426 Identities=21% Similarity=0.272 Sum_probs=377.2
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHH--HHHHHhcCCcccccCCCc
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE--IERQIEAGKFMWRTDRED 140 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~--i~~~~~~~~~~~~~~~~d 140 (520)
++||. +.++...|++... +++.+.+++||++||+++|+||++++++|.+++.+ +..+.. .... ...+||
T Consensus 7 ~~~~~--~~~~~~~~s~~~~-----~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~-~~~~-~~~~~~ 77 (449)
T PRK08540 7 DYRYG--TPEMKRVWSEENK-----LQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERV-KEIE-AEIHHD 77 (449)
T ss_pred CcccC--CHHHHHHcChHHH-----HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHH-HHHH-HHhCCC
Confidence 45664 6788899998754 55777889999999999999999999999999876 532210 1111 122677
Q ss_pred hhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccc
Q 010020 141 VHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP 219 (520)
Q Consensus 141 v~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P 219 (520)
+ +++|++|++++| +.|+|||+|+|||||++|+++|++|+++..+.+.|..++++|.++|++|+||+||||||+|||||
T Consensus 78 v-~~~e~~L~~~~~~~~~~~vH~g~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P 156 (449)
T PRK08540 78 I-MAVVKALSEVCEGDAGEYVHFGATSNDIIDTATALQLKDSLEILEEKLKKLRGVLLKKAEEHKNTVCIGRTHGQHAVP 156 (449)
T ss_pred c-HHHHHHHHHHhhhhhhcceecCccHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhcCCCcCee
Confidence 7 899999999995 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCcc-----ccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHH
Q 010020 220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGAC-----ALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLE 294 (520)
Q Consensus 220 ~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~-----a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e 294 (520)
||||||+++|+++|.|+++||.+++++++.+||||+ +++|++++++ ++++++|||+.+..|+ ++++||++++
T Consensus 157 ~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGt~~a~~~~~~~i~-~~~a~~LGl~~~~~~~--~~~~rd~~~e 233 (449)
T PRK08540 157 TTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTGAVGTQAAFGEKGIEIQ-KRVMEILGLKPVLISN--QVIQRDRHAE 233 (449)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccccccchhhCCCccHHHH-HHHHHHcCCCCCCCcC--CccccHHHHH
Confidence 999999999999999999999999999999999983 3445566776 5899999999887653 5799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccc
Q 010020 295 FLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 373 (520)
Q Consensus 295 ~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~ 373 (520)
++++++.++++|+|||+||++|+++|||||..+ +++++|||||||||||+.+|.++++|+++.|....++ .++|++
T Consensus 234 ~~~~l~~~a~~l~kia~Dl~l~s~~e~gei~e~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~---~~~~~~ 310 (449)
T PRK08540 234 FMMFLANIATTLDKIGLEIRNLQRTEIGEVEEEFGKKQVGSSTMPHKRNPITSEQICGLARVVRSNVEPAL---LNNPLW 310 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccCCCCCCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHH---hcchhh
Confidence 999999999999999999999999999999754 3579999999999999999999999999999886644 567999
Q ss_pred cccccccc---cccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcc--cChhHHHHHHHHHHHcCCChhhHHHHHHHH
Q 010020 374 YNRDLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDIVGKA 448 (520)
Q Consensus 374 ~erD~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~ 448 (520)
|+||++++ |..+++++..+..++..+..++++|+||++||++|+. .+++++|++++.|+++|+|||+||++|+++
T Consensus 311 ~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~glg~~~Ah~~v~~l 390 (449)
T PRK08540 311 DERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGLIMAEAVMIELAKRGMGRQEAHELVRQA 390 (449)
T ss_pred hccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999875 7889999999999999999999999999999999985 899999999999999999999999999999
Q ss_pred HHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHH
Q 010020 449 VALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAK 512 (520)
Q Consensus 449 v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~ 512 (520)
++.+.++|+++.++..++ ..+...+ ++++.+++||+. |+|+++..|+++++++++.
T Consensus 391 ~~~a~~~g~~l~e~~~~~-~~~~~~l~~~~l~~~ldp~~-------~~g~a~~~v~~~~~~~~~~ 447 (449)
T PRK08540 391 AMKAHEEGRHLKEVLLED-EEVMKYLTEEELEELLDPET-------YIGTAPEIVENVIEKLKEW 447 (449)
T ss_pred HHHHHHhCCCHHHHHHhC-hhhhccCCHHHHHHHcCHHH-------hcCchHHHHHHHHHHHHHh
Confidence 999999999999998765 3343444 567999999996 9999999999999887654
No 21
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=3.6e-83 Score=683.35 Aligned_cols=422 Identities=22% Similarity=0.244 Sum_probs=376.0
Q ss_pred ccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcc-cccCCCc
Q 010020 62 WGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFM-WRTDRED 140 (520)
Q Consensus 62 ~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~-~~~~~~d 140 (520)
+.+||+ +.++...|++.. +++..+.+++||++||.++|+||++++++|.++++++..+ .+.+. ..+..++
T Consensus 2 ~~~~y~--~~~~~~~~s~~~-----~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~~~~--~~~~~~~~~~~~~ 72 (437)
T cd01597 2 LGDLFG--TPAMREIFSDEN-----RVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVERLD--LEALAEATARTGH 72 (437)
T ss_pred CccccC--CHHHHHHcCcHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccCCC--HHHHHHHHHHhCC
Confidence 345784 688999999764 5668889999999999999999999999999998765211 11121 1112233
Q ss_pred hhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccc
Q 010020 141 VHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQP 219 (520)
Q Consensus 141 v~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P 219 (520)
.++++|++|++++| +.|+|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|+||+||||||+|||||
T Consensus 73 ~v~a~e~~l~e~~g~~~g~~lH~grSrnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P 152 (437)
T cd01597 73 PAIPLVKQLTAACGDAAGEYVHWGATTQDIIDTALVLQLRDALDLLERDLDALLDALARLAATHRDTPMVGRTHLQHALP 152 (437)
T ss_pred CcHHHHHHHHHHcCccccCeeecCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeehhhcCcccee
Confidence 33689999999999 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCc----cHHHHHHhcCCCCCCCCccccccchHHHHHH
Q 010020 220 VLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI----DRFMTAEALEFTAPMRNSIDAVSDRDFVLEF 295 (520)
Q Consensus 220 ~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~----~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~ 295 (520)
||||||+++|+++|.|+++||.+++++++.+||||++++|++++. +++++|+.|||+.+.. +|+++||+++++
T Consensus 153 ~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga~Gtg~~~~~~~~~~~~~~a~~LGf~~~~~---~~~~~rd~~~e~ 229 (437)
T cd01597 153 ITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGAAGTLASLGDQGLAVQEALAAELGLGVPAI---PWHTARDRIAEL 229 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccCCcHHHHHHHHHHHcCCCCCCC---ccccCcHHHHHH
Confidence 999999999999999999999999999999999998888988887 4899999999998764 478999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccc
Q 010020 296 LSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAY 374 (520)
Q Consensus 296 ~~~la~la~~L~ria~Dl~ll~s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~ 374 (520)
+++++.++.+|+|||+||++|+++|||||.+|+ ++++|||||||||||+.+|.++++|+++.|+.++++.++ ..+|
T Consensus 230 ~~~l~~~a~~l~rla~Dl~l~s~~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~ 306 (437)
T cd01597 230 ASFLALLTGTLGKIARDVYLLMQTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALARRVPGLAALLLDAM---VQEH 306 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccceeecccCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHhc---hhhc
Confidence 999999999999999999999999999999996 589999999999999999999999999999988877655 4799
Q ss_pred cccc---ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcc--cChhHHHHHHHHHHHcCCChhhHHHHHHHHH
Q 010020 375 NRDL---QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDIVGKAV 449 (520)
Q Consensus 375 erD~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v 449 (520)
|||+ +.+|..+++++..+..++..+..++++|+||++||++++. .++.+|+.++..|++ |+|||+||++|++++
T Consensus 307 erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae~l~~~l~~-~i~~~~Ah~~v~~~~ 385 (437)
T cd01597 307 ERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMALAP-KLGRQEAHDLVYEAC 385 (437)
T ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 9998 7788999999999999999999999999999999999994 577889999999998 699999999999999
Q ss_pred HHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHHH
Q 010020 450 ALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLH 507 (520)
Q Consensus 450 ~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~ 507 (520)
+.+.++|+++.++..++.. +...+ ++++.+++||+. +.|++|..++++++
T Consensus 386 ~~a~~~g~~~~~~~~~~~~-~~~~l~~~~l~~~ldp~~-------~v~~a~~~~~~~~~ 436 (437)
T cd01597 386 MRAVEEGRPLREVLLEDPE-VAAYLSDEELDALLDPAN-------YLGSAPALVDRVLA 436 (437)
T ss_pred HHHHHhCCCHHHHHHhChh-hhccCCHHHHHHhcCHHH-------HhcchHHHHHHHHh
Confidence 9999999999999876533 33344 677999999996 77899999999873
No 22
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=2.4e-82 Score=676.47 Aligned_cols=420 Identities=20% Similarity=0.237 Sum_probs=368.2
Q ss_pred cccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch---hccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHH
Q 010020 39 TYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI---SYDKALYKHDIMGSKAHASMLAKQGLISDSDKNS 115 (520)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~---~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~ 115 (520)
+|.++||.|+|||. +|.+.+++|+.+. ++...+++++..+++||++||.+.|+||++++++
T Consensus 1 ~g~~~~p~~~~~g~----------------~t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~ 64 (458)
T PLN00134 1 MGPIQVPADKLWGA----------------QTQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKA 64 (458)
T ss_pred CCCccCCcccchhH----------------HHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Confidence 57788888887764 7999999999875 7788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCccccc----CCCchhhh----HHHHHHHHhC-CCCCc--cc------CCCCchhHHHHHHHHHH
Q 010020 116 ILRGLDEIERQIEAGKFMWRT----DREDVHMN----IEAALTDIIG-EPAKK--LH------TARSRNDQVLTDFRLWC 178 (520)
Q Consensus 116 I~~al~~i~~~~~~~~~~~~~----~~~dv~~~----ie~~l~e~~g-~~g~~--lH------~G~S~nDi~~Ta~~L~l 178 (520)
|.++|++|.++...++|++++ .++|+||+ +++++.+.+| +.|+| || +|+||||+++|+++|++
T Consensus 65 I~~al~ei~~~~~~~~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~ 144 (458)
T PLN00134 65 IMQAADEVAEGKLDDHFPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAA 144 (458)
T ss_pred HHHHHHHHHcCcccCCccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHH
Confidence 999999998887778999876 46666666 8899999999 68888 88 99999999999999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCcccc
Q 010020 179 RDA-IDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACAL 257 (520)
Q Consensus 179 r~~-l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~ 257 (520)
|+. +..+.+.|.+|+++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+|+
T Consensus 145 ~~~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~Av 224 (458)
T PLN00134 145 ATEIHSRLIPALKELHESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAV 224 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeee
Confidence 944 7899999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCCccHHH-------HHHhcCCCCC-CCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---Ccceeec
Q 010020 258 AGTGLPIDRFM-------TAEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFITP 326 (520)
Q Consensus 258 ~Gt~~~~~r~~-------la~~LG~~~~-~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e~gev~l 326 (520)
||+++++|++ +|+.|||+.+ ..|.+|++++||++++++++++.++++|+|||+||++|+|+ |||||++
T Consensus 225 -GT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~l 303 (458)
T PLN00134 225 -GTGLNTKKGFDEKIAAAVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNL 303 (458)
T ss_pred -cCCccCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEEC
Confidence 8999999874 9999999975 67889999999999999999999999999999999999965 8999999
Q ss_pred cCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHH-HHHHhh
Q 010020 327 SDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVS-AEFAQN 405 (520)
Q Consensus 327 ~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~-~~~l~~ 405 (520)
|+ .++|||||||||||+.+|.++++|+++.|.+.+++...++.++.+|.+.......+++.+..+..++..+ ..|+++
T Consensus 304 p~-~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~ 382 (458)
T PLN00134 304 PE-NEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRG 382 (458)
T ss_pred CC-CCCCCCCCCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 97 4899999999999999999999999999999999865554344444321111125566677777777777 589999
Q ss_pred cccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccCh
Q 010020 406 ITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGV 484 (520)
Q Consensus 406 l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp 484 (520)
|+||++||++|+..++.++++|++ +++|++||+ +++++.++|+++++++.+. ..+ ++++.+++||
T Consensus 383 l~vn~erm~~~l~~~~~l~~~La~-----~ig~~~A~~----~~~~a~~~g~~l~e~~~~~-----~~l~~~el~~~ldP 448 (458)
T PLN00134 383 IEANRERISKLLHESLMLVTALNP-----KIGYDKAAA----VAKKAHKEGTTLKEAALKL-----GVLTAEEFDELVVP 448 (458)
T ss_pred CEECHHHHHHHHHhccchHHHhhh-----ccCHHHHHH----HHHHHHHhCCCHHHHHHhc-----CCCCHHHHHHHcCH
Confidence 999999999999888888877776 478899987 7777888999999988752 344 5679999999
Q ss_pred hHhhhh
Q 010020 485 ENAIRK 490 (520)
Q Consensus 485 ~~~v~~ 490 (520)
+.++.+
T Consensus 449 ~~~~~~ 454 (458)
T PLN00134 449 EKMTGP 454 (458)
T ss_pred HHhcCC
Confidence 985543
No 23
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=2.7e-82 Score=676.02 Aligned_cols=423 Identities=20% Similarity=0.220 Sum_probs=373.9
Q ss_pred cccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCCCHH
Q 010020 33 SLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLISDS 111 (520)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI~~~ 111 (520)
++|.|.+|+++||.|.|||. +|.+.+++|+.+. .++..++++.+.+++|||+||+++|+||++
T Consensus 2 r~e~d~~g~~~~p~~~~~g~----------------~t~r~~~~f~~~~~~~~~~~i~a~~~ve~A~a~a~~~~Giip~~ 65 (458)
T TIGR00979 2 RIEKDSMGEIQVPADKYWGA----------------QTQRSLENFKIGTEKMPLELIHAFAILKKAAAIVNEDLGKLDAK 65 (458)
T ss_pred CCccccCCCCCCcccchhhH----------------HHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 57899999999988887754 7999999999764 677899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhcCCcccc----cCCCchhhhHHH----HHHHHhC-CCC--Cccc------CCCCchhHHHHHH
Q 010020 112 DKNSILRGLDEIERQIEAGKFMWR----TDREDVHMNIEA----ALTDIIG-EPA--KKLH------TARSRNDQVLTDF 174 (520)
Q Consensus 112 ~a~~I~~al~~i~~~~~~~~~~~~----~~~~dv~~~ie~----~l~e~~g-~~g--~~lH------~G~S~nDi~~Ta~ 174 (520)
.+++|.++|++|..+...++|+.+ +.++++||+++. ++.+.+| +.| +||| +|+||||+++|++
T Consensus 66 ~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~ 145 (458)
T TIGR00979 66 KADAIVQAADEILAGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAM 145 (458)
T ss_pred HHHHHHHHHHHHHhccccCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHH
Confidence 999999999999776545778766 458999999877 8899998 665 4599 6999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCC
Q 010020 175 RLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 253 (520)
Q Consensus 175 ~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plG 253 (520)
+|++|+++ ..+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|||
T Consensus 146 ~L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lG 225 (458)
T TIGR00979 146 HIAAVLAIKNQLIPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIG 225 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999 69999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccHH-------HHHHhcCCCC-CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---Ccc
Q 010020 254 ACALAGTGLPIDRF-------MTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFG 322 (520)
Q Consensus 254 g~a~~Gt~~~~~r~-------~la~~LG~~~-~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e~g 322 (520)
|+|+ ||+++++++ ++++.|||+. +..|+++++++||+++|++++++.++++|+|||+||++|+|+ |||
T Consensus 226 g~Av-GT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~g 304 (458)
T TIGR00979 226 GTAV-GTGLNTHPGFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLG 304 (458)
T ss_pred CChh-cCCccCChhHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence 9888 999999987 5999999996 677888888999999999999999999999999999999954 799
Q ss_pred eeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH-H
Q 010020 323 FITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-E 401 (520)
Q Consensus 323 ev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~-~ 401 (520)
||++|+ +++|||||||||||+.+|.++++|+++.|++.+++.++.+.+..+|.+.......++..+..+..++..+. .
T Consensus 305 ev~~p~-~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 383 (458)
T TIGR00979 305 ELFIPE-NEPGSSIMPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDH 383 (458)
T ss_pred eEECCC-CCCCCCCCCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 79999999999999999999999999999999999988765555555432221236666777777777776 6
Q ss_pred HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHh
Q 010020 402 FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYE 480 (520)
Q Consensus 402 ~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~ 480 (520)
++++|+||++||++|+..++.++++|++ +++|++||+ +++++.++|+++++++.+. ..+ ++++.+
T Consensus 384 ~l~~L~v~~erm~~nl~~~~~~~t~La~-----~lg~~~A~~----~~~~a~~~~~~~~e~~~~~-----~~l~~~el~~ 449 (458)
T TIGR00979 384 CVVGIEPNKERIQQLLNNSLMLVTALNP-----HIGYDNAAK----IAKKAHKEGITLKEAALEL-----GLLSEEEFDE 449 (458)
T ss_pred HHccCEECHHHHHHHHHcCccHHHHhhh-----ccCHHHHHH----HHHHHHHhCCCHHHHHHHc-----CCCCHHHHHH
Confidence 9999999999999999888887777776 479999987 7777788899999987752 333 567999
Q ss_pred ccChhHh
Q 010020 481 YLGVENA 487 (520)
Q Consensus 481 ~ldp~~~ 487 (520)
++||+.+
T Consensus 450 ~ldp~~~ 456 (458)
T TIGR00979 450 WVVPEQM 456 (458)
T ss_pred HcCHHHh
Confidence 9999974
No 24
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=3.6e-82 Score=670.97 Aligned_cols=411 Identities=17% Similarity=0.198 Sum_probs=368.6
Q ss_pred CCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHH----HHHHHHHhcCCcccccCCCc
Q 010020 65 RFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL----DEIERQIEAGKFMWRTDRED 140 (520)
Q Consensus 65 r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al----~~i~~~~~~~~~~~~~~~~d 140 (520)
||+ +.++...|++... +.+.+.++.|++++++++|+||++.+++|.+.+ .+|.+.... .+||
T Consensus 4 ~y~--~~~~~~~fs~~~~-----~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~d~~~i~~~~~~-------~~h~ 69 (431)
T PRK07380 4 RYT--LPEMGNIWTDTAK-----FQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKANFDPQRILEIEAE-------VRHD 69 (431)
T ss_pred ccC--cHHHHHHcCHHHH-----HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCCCHHHHHHHHHH-------hCCC
Confidence 774 7889999998764 446777888999999999999999999998754 223333222 3677
Q ss_pred hhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcccc
Q 010020 141 VHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPV 220 (520)
Q Consensus 141 v~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~ 220 (520)
+ +++++.|.+.+|+.|+|||+|+|||||+||+++|++|+++..+.+.|.+++++|.++|++|+||+||||||+|||+||
T Consensus 70 v-~a~v~~l~~~~g~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~ 148 (431)
T PRK07380 70 V-IAFLTNVNEYVGDAGRYIHLGMTSSDVLDTGLALQLVASLDLLLEELEDLIQAIRYQAREHRNTVMIGRSHGIHAEPI 148 (431)
T ss_pred h-HHHHHHHHHHHHHhhccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeechhcCccceec
Confidence 7 789999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHH---HHHHhcCCCCCCCCccccccchHHHHHHHH
Q 010020 221 LLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF---MTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297 (520)
Q Consensus 221 TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~---~la~~LG~~~~~~n~~~~~~~rd~~~e~~~ 297 (520)
|||||+++|+++|.|+++||.+++++++.+||| ||+ ||.+++|++ ++++.|||+.+..+ .++.+||+++|+++
T Consensus 149 TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~-GAv-Gt~~~~~~~~~~~~a~~LGl~~~~~~--~~v~~rd~~~e~~~ 224 (431)
T PRK07380 149 TFGFKLAGWLAETLRNRERLVRLREDIAVGQIS-GAV-GTYANTDPRVEAITCQKLGLKPDTAS--TQVISRDRHAEYVQ 224 (431)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-hhh-cCcccCChhHHHHHHHHcCCCCCCCC--CCccCcHHHHHHHH
Confidence 999999999999999999999999999999996 566 999999987 89999999977543 35699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 298 ~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
+++.++++|+|||+||++|++.+|+|+..+ ..+++|||||||||||+.+|+++++|+.+.|.+.+++ .++|++|||
T Consensus 225 ~la~~a~~L~kia~Di~~l~~~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~~a~~~~g~~~~~~---~~~~~~~eR 301 (431)
T PRK07380 225 TLALVGASLERFATEIRNLQRTDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSGLARVLRSYAVAAL---ENVALWHER 301 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCceeecccCCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---Hhchhhhcc
Confidence 999999999999999999999999988644 2356899999999999999999999999999998754 566899999
Q ss_pred cccc---ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhc--ccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHH
Q 010020 377 DLQE---DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKAL--PAGYLDATTLADYLVNKQVPFRTSHDIVGKAVAL 451 (520)
Q Consensus 377 D~~~---~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~ 451 (520)
|++. +|..+|+++..+..++..+..++++|+||++||++|+ .+|+++++++++.|+++|+|||+||++|++++++
T Consensus 302 D~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~~~Lv~~gl~r~~Ah~~V~~~~~~ 381 (431)
T PRK07380 302 DISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVLLALVEKGMSREEAYRLVQKNAHT 381 (431)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 9975 4789999999999999999999999999999999999 4899999999999999999999999999999999
Q ss_pred HHH-cCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHH
Q 010020 452 CVS-KECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQ 505 (520)
Q Consensus 452 a~~-~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~ 505 (520)
+.+ +|.+|.|++.++ +.+...+ .+++.+++||+. |.|.++..++++
T Consensus 382 a~~~~~~~l~e~l~~~-~~~~~~l~~~~l~~~~dp~~-------ylg~~~~~~~~~ 429 (431)
T PRK07380 382 AWNTEGGNFRANLEAD-PEVTQLLSAAELADCFDPQL-------HLKNLDVIYQRL 429 (431)
T ss_pred HHHHhCCCHHHHHHcC-hHhhhcCCHHHHHHhhCHHH-------HhcchHHHHHHh
Confidence 999 999999998764 4455555 467899999995 999999988764
No 25
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=1.4e-82 Score=679.79 Aligned_cols=431 Identities=19% Similarity=0.180 Sum_probs=373.9
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCccccc-CCCch
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRT-DREDV 141 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~-~~~dv 141 (520)
+.||. +.++...|++.. .+++++.++.||++||+++|+||++++++|.++++....+... -..... .+||+
T Consensus 7 ~~~y~--~~~~~~i~s~~~-----~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~d~~~-~~~~~~~~~~dv 78 (451)
T PRK06390 7 EYRYG--RDQVKYIFDDEN-----RLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSVRLER-VREIESEIKHDV 78 (451)
T ss_pred CcccC--CHHHHHHcCHHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHH-HHHHHHHhCCCc
Confidence 34664 578999999875 4568889999999999999999999999999988653211110 000112 38899
Q ss_pred hhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccc
Q 010020 142 HMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVL 221 (520)
Q Consensus 142 ~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~T 221 (520)
+++|+.|++.||+.|+|||+|+|||||++|+++|++|+++..+.+.|..++++|.++|++|++|+||||||+|||||||
T Consensus 79 -~~~~~~L~~~~g~~~~~iH~G~SsnDi~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T 157 (451)
T PRK06390 79 -MALVEALSEQCSAGKNYVHFGVTSNDINDTATALQIHDFVSIIKDDIKNLMETLIKLIDEYKDSPMMGRTHGQHASPIT 157 (451)
T ss_pred -HHHHHHHHHHhhhhhhheecCccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhhCCCcCeehh
Confidence 8999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhc----ccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHH
Q 010020 222 LQHLLLAYVEQLERDAGRLQDCRVRMN----FCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLS 297 (520)
Q Consensus 222 fG~~la~~~~~l~r~~~rL~~~~~r~~----~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~ 297 (520)
||||+++|+++|.|+++||.+++++++ .+|+|+++..|++++.+++++|++|||+.+..+ +++++||+++++++
T Consensus 158 ~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~gavGt~a~~g~~~~~~~~~~a~~LGl~~~~~~--~~~~~rD~~~e~~~ 235 (451)
T PRK06390 158 FGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLGPVGTGAALGKDALDIQNRVMEILGIYSEIGS--TQIVNRDRYIEYLS 235 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhcChhhCCCcHHHHHHHHHHHcCCCCCCCc--cccccchHHHHHHH
Confidence 999999999999999999999999999 556665555577777889999999999987543 47799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceee--ccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccc
Q 010020 298 ANSIIAIHLSRLGEEWVLWASEEFGFIT--PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYN 375 (520)
Q Consensus 298 ~la~la~~L~ria~Dl~ll~s~e~gev~--l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~e 375 (520)
+++.++++|+|||+||++|+++||||+. +++++++|||||||||||+.+|.+++++..+.+.....+..+ +.+|+
T Consensus 236 ~l~~la~~l~kia~Di~l~ss~e~g~v~E~~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~~~~l~~~~~~~~---~~~~e 312 (451)
T PRK06390 236 VINGISVTLEKIATEIRNLQRPEIDEVSEYFDEESQVGSSSMPSKVNPINSENVVSLSRFIRSLIIPEYEAG---VTWHE 312 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhhcccccCCCCCccCCCCCCCcHHHHHHHHHHHHHHHhHHHHHHhh---hHhhc
Confidence 9999999999999999999999999995 445689999999999999999999999988887776444332 56799
Q ss_pred ccccc---ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccCh-hHHHHHHHHHHHcCCChhhHHHHHHHHHHH
Q 010020 376 RDLQE---DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGY-LDATTLADYLVNKQVPFRTSHDIVGKAVAL 451 (520)
Q Consensus 376 rD~~~---~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~-~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~ 451 (520)
||+++ +|..+++.+..+..++..+..++++|+||++||++|+..++ ++++++++.|++.|++||+||++|++++++
T Consensus 313 rd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~se~la~~L~~~G~~~~~Ah~~v~~~~~~ 392 (451)
T PRK06390 313 RDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDSIMSESIVRALTLSGMPRQDAHEFVRRASME 392 (451)
T ss_pred cCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccchhhHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99865 56667888889999999999999999999999999996544 447779999999999999999999999999
Q ss_pred HHHcCCChhHhhHHHHhhcCCCCh-HHHHhccChhHhhhhcccCCCccHHHHHHHHHHHHHHhhhh
Q 010020 452 CVSKECQLQDLSLDEMRSLNPVFD-KDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN 516 (520)
Q Consensus 452 a~~~g~~l~el~~~~~~~~~~~~~-~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~~~~l~~~ 516 (520)
+.++|+++.++..++ .+.+.++ +++.+++||++ |.|++++.|+++++.++..++..
T Consensus 393 a~~~g~~l~~~~~~~--~~~~~l~~~~l~~~ldP~~-------~i~~a~~~v~~~~~~~~~~~~~~ 449 (451)
T PRK06390 393 ARSNGKSLKSSLIEA--GILKYIDEKTLDRAMDPAN-------FIGQAPSICDNVVNNAERRMKDA 449 (451)
T ss_pred HHHhCCCHHHHHHhC--hhhhcCCHHHHHHhcCHHH-------HhhhhHHHHHHHHHHHHHHhhcc
Confidence 999999999987764 3444554 56999999996 88899999999999999887653
No 26
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=3.1e-81 Score=667.81 Aligned_cols=412 Identities=23% Similarity=0.270 Sum_probs=367.7
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHH-------HHHHHHHHhcCCcccc
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRG-------LDEIERQIEAGKFMWR 135 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~a-------l~~i~~~~~~~~~~~~ 135 (520)
.+||+ +.++...|++.. .+.+.+.+++||++||+++|+||++++++|.++ ++++.+...
T Consensus 2 ~~~y~--~~~~~~ifs~~~-----~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~~~~~~d~~~l~~~~~------- 67 (435)
T TIGR00928 2 DERYG--TPEMRAIWSEEN-----KFKTWLDVEVALLRALAELGVIPAEAVKEIRAKANFTDVDLARIKEIEA------- 67 (435)
T ss_pred CcccC--cHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCCCCccCHHHHHHHHH-------
Confidence 35674 788999998864 456788899999999999999999999999887 223322111
Q ss_pred cCCCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCC
Q 010020 136 TDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ 215 (520)
Q Consensus 136 ~~~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q 215 (520)
..+||+ +++|+.|++.+|+.|+|||+|+||||+++|+++|++|+.+..+.+.|..++++|.++|++|+||+||||||+|
T Consensus 68 ~~~~~v-~~~e~~l~~~~g~~~~~vh~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q 146 (435)
T TIGR00928 68 VTRHDV-KAVVYALKEKCGAEGEFIHFGATSNDIVDTALALLLRDALEIILPKLKQLIDRLKDLAVEYKDTVMLGRTHGQ 146 (435)
T ss_pred HHCcCh-HHHHHHHHHHhhhhhhheeecccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHhHHhcCC
Confidence 136888 8999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccH------HHHHHhcCCCCCCCCccccccch
Q 010020 216 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDR------FMTAEALEFTAPMRNSIDAVSDR 289 (520)
Q Consensus 216 ~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r------~~la~~LG~~~~~~n~~~~~~~r 289 (520)
||||||||||+++|+++|.|+++||.+++++++.+|+|| ++ ||++++++ +++|+.|||+.|..|+ ++++|
T Consensus 147 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgG-a~-Gt~~~~~~~~~~~~~~~a~~LGl~~~~~~~--~~~~r 222 (435)
T TIGR00928 147 HAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISG-AV-GTHAAAYPLVEEVEERVTEFLGLKPVPIST--QIEPR 222 (435)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-hh-hhHhhccccHHHHHHHHHHhcCCCCCCCCc--ccccc
Confidence 999999999999999999999999999999999999986 44 99999988 8999999999887543 77999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHc
Q 010020 290 DFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCK 368 (520)
Q Consensus 290 d~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~ 368 (520)
|++++++++++.++++|+|||+||++|+++||+|+.+|. ++++|||||||||||+.+|+++++|+++.|+.+.++..+
T Consensus 223 D~~~e~~~~l~~la~~L~ria~Dl~l~s~~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~- 301 (435)
T TIGR00928 223 DRHAELLDALALLATTLEKFAVDIRLLQRTEHFEVEEPFGKGQVGSSAMPHKRNPIDFENVCGLARVIRSVLSPALENV- 301 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceecccCCCCCCcCCCCcCcCcHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 999999999999999999999999999999999987774 457999999999999999999999999999998877544
Q ss_pred cCcccccccccc---ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcc--cChhHHHHHHHHHHHcCCChhhHHH
Q 010020 369 GLPLAYNRDLQE---DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHD 443 (520)
Q Consensus 369 ~~p~~~erD~~~---~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~Lv~~G~~fr~Ah~ 443 (520)
|.+||||.++ +|..+++++..+..++..+..++++|+||++||++++. .++++++++++.|+++|+|||+||+
T Consensus 302 --~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~~la~~L~~~g~g~~~Ah~ 379 (435)
T TIGR00928 302 --PLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASERVLIALVERGMGREEAYE 379 (435)
T ss_pred --hHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHHHHHHHHHHhCCChhhHHH
Confidence 8999999976 45569999999999999999999999999999999995 5667899999999999999999999
Q ss_pred HHHHHHHHHHH-cCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHH
Q 010020 444 IVGKAVALCVS-KECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTE 504 (520)
Q Consensus 444 ~v~~~v~~a~~-~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~ 504 (520)
+|+++++.+.+ +|.++.++..++ ..+...+ ++++.+++||+. |.|.++++|++
T Consensus 380 ~v~~~~~~a~~~~~~~l~~~~~~~-~~~~~~l~~~~l~~~ldp~~-------~~~~a~~~~~~ 434 (435)
T TIGR00928 380 IVRELAMGAAEVDEPDLLEFLLAD-ERITKYLKEEELAELLDPET-------YIGNAREIVER 434 (435)
T ss_pred HHHHHHHHHHHcccccHHHHHhhC-ccchhhcCHHHHHHcCCHHH-------HhChHHHHHHh
Confidence 99999999999 999999988764 2233333 567889999996 88999998876
No 27
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=1.5e-80 Score=662.84 Aligned_cols=425 Identities=23% Similarity=0.242 Sum_probs=374.6
Q ss_pred cccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hcc--HHHHHHHHHHHHHHHHHHHHcCCCC
Q 010020 33 SLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYD--KALYKHDIMGSKAHASMLAKQGLIS 109 (520)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~--~~l~~~~i~~~~A~a~al~e~GiI~ 109 (520)
+.|.|.+|..+||.|.|||. +|++.+.+|..+. ++. ...+++.+.++.|||+||+++|+||
T Consensus 1 r~~~~~~~~~~~~~~~~~~~----------------~~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp 64 (468)
T TIGR00839 1 RIEEDLLGEREVPADAYYGI----------------HTLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIP 64 (468)
T ss_pred CCCcccCCCCCCcccccchH----------------HHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 36889999999999888864 7999999999654 666 7899999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHH-HHhcCCccccc----CCCchhhhH----HHHHHHHhC-CCCCcccC--------CCCchhHHH
Q 010020 110 DSDKNSILRGLDEIER-QIEAGKFMWRT----DREDVHMNI----EAALTDIIG-EPAKKLHT--------ARSRNDQVL 171 (520)
Q Consensus 110 ~~~a~~I~~al~~i~~-~~~~~~~~~~~----~~~dv~~~i----e~~l~e~~g-~~g~~lH~--------G~S~nDi~~ 171 (520)
++++++|.++|+++.. +...+.+++++ .++|+||++ +..|.+.+| +.|+|+|+ |+||||+++
T Consensus 65 ~~~a~~I~~al~~~~d~~~~~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~ 144 (468)
T TIGR00839 65 ESIANAIVAACDEILNNGKCHDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYP 144 (468)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHH
Confidence 9999999999988753 22223566553 258899997 888899999 78999995 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 010020 172 TDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 251 (520)
Q Consensus 172 Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~p 251 (520)
|+++|++|+++..+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+|
T Consensus 145 Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~ 224 (468)
T TIGR00839 145 TGFRIAVYSSLIKLVDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVN 224 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCccHHHH-------HHhcCCCCC-CCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---
Q 010020 252 LGACALAGTGLPIDRFMT-------AEALEFTAP-MRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE--- 320 (520)
Q Consensus 252 lGg~a~~Gt~~~~~r~~l-------a~~LG~~~~-~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e--- 320 (520)
|||+|+ ||++++|+++. |+.|||+.+ ..|+++++++||+++|++++++.++++|+|||+||++|+|+|
T Consensus 225 lGg~Av-GT~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~ 303 (468)
T TIGR00839 225 LGATAI-GTGLNTPPEYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAG 303 (468)
T ss_pred CCCcce-eCCCcCChhHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 999888 99999997655 999999975 569999999999999999999999999999999999999765
Q ss_pred cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccccc-ccccHHHHHHHHHHHHHH-
Q 010020 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE-DKEPTFDSVKTIVGMLEV- 398 (520)
Q Consensus 321 ~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~-~~~~l~~~~~~~~~~l~~- 398 (520)
||||++| .+++|||||||||||+.+|.++++|+++.|.+.+++.++++.+++++. ++. ....+++++..+..++..
T Consensus 304 ~~ev~~~-~~~~gSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~ 381 (468)
T TIGR00839 304 LNEINLP-ELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNV-MEPVIGQAMFESIHILTNACYNL 381 (468)
T ss_pred ceEEeCC-CCCCCCCCCCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhh-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999 589999999999999999999999999999999997777776766544 221 245677888888888875
Q ss_pred HHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCChHHH
Q 010020 399 SAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDV 478 (520)
Q Consensus 399 ~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~~~~~ 478 (520)
+..++++|+||++||++|+..++.++++|+ || .+|+.++++++.+.++|+++.++..++ ....++++
T Consensus 382 ~~~~l~~L~vn~erm~~~l~~~~~~~~~La--------~~-~g~~~a~~~~~~a~~~g~~l~e~~~~~----~~l~~~~l 448 (468)
T TIGR00839 382 TDKCVNGITANKEICEGYVFNSIGIVTYLN--------PF-IGHHNGDIVGKICAETGKSVREVVLEK----GLLTEEEL 448 (468)
T ss_pred HHHHHccCEECHHHHHHHHHHhHHHHHHHh--------hH-hhHHHHHHHHHHHHHhCCCHHHHHHhc----CCCCHHHH
Confidence 778999999999999999988777777665 55 389999999999999999999988753 12235679
Q ss_pred HhccChhHhhh
Q 010020 479 YEYLGVENAIR 489 (520)
Q Consensus 479 ~~~ldp~~~v~ 489 (520)
.+++||+++++
T Consensus 449 ~~~ldP~~~v~ 459 (468)
T TIGR00839 449 DDIFSVENLMH 459 (468)
T ss_pred HHHcCHHHHcC
Confidence 99999998664
No 28
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=3.7e-80 Score=659.71 Aligned_cols=421 Identities=21% Similarity=0.263 Sum_probs=371.9
Q ss_pred ccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccc-hhccHHHHHHHHHHHHHHHHHHHHcCCCCHHh
Q 010020 34 LSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTES-ISYDKALYKHDIMGSKAHASMLAKQGLISDSD 112 (520)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~-~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~ 112 (520)
.|.|.+|..++|.+.+| |. ++.+..++|+.+ ..++..++...+.+++|||+||++.|+||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~------------g~----~~~~~~~~f~~~~~~~~~~~i~~~l~ve~A~a~al~~~GiIp~~~ 65 (455)
T cd01362 2 IEKDSMGEVEVPADALW------------GA----QTQRSLENFPIGGERMPRELIRALGLLKKAAAQANAELGLLDEEK 65 (455)
T ss_pred CCcccCCCcCCccccch------------hH----HHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 57899999998766655 44 789999999754 46678999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccc----CCCchhhhHHHHHH----HHhC---------CCCCcccCCCCchhHHHHHHH
Q 010020 113 KNSILRGLDEIERQIEAGKFMWRT----DREDVHMNIEAALT----DIIG---------EPAKKLHTARSRNDQVLTDFR 175 (520)
Q Consensus 113 a~~I~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~~l~----e~~g---------~~g~~lH~G~S~nDi~~Ta~~ 175 (520)
+++|.++|++|......++|+.++ ..+|+||+++..+. +..| +.++|||+|+||||+++|+++
T Consensus 66 a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~ 145 (455)
T cd01362 66 ADAIVQAADEVIAGKLDDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMH 145 (455)
T ss_pred HHHHHHHHHHHHhcccccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHH
Confidence 999999999996543357788766 68999999876655 6657 345679999999999999999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCc
Q 010020 176 LWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGA 254 (520)
Q Consensus 176 L~lr~~l~-~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg 254 (520)
|++|+++. .+.+.|.+++++|.++|++|++|+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||
T Consensus 146 L~lr~~l~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg 225 (455)
T cd01362 146 IAAALALQERLLPALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGG 225 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCC
Confidence 99999995 59999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCccHH-------HHHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---Ccce
Q 010020 255 CALAGTGLPIDRF-------MTAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGF 323 (520)
Q Consensus 255 ~a~~Gt~~~~~r~-------~la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e~ge 323 (520)
+|+ ||+++++++ ++|++|||+ .+..|++||+++||++++++++++.++++|+|||+||++|+|+ ||||
T Consensus 226 ~A~-Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~ge 304 (455)
T cd01362 226 TAV-GTGLNAHPGFAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGE 304 (455)
T ss_pred eec-cCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCce
Confidence 786 999999985 789999999 5678889999999999999999999999999999999999965 7999
Q ss_pred eeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHH-HHH
Q 010020 324 ITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVS-AEF 402 (520)
Q Consensus 324 v~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~-~~~ 402 (520)
|.+|+ +++|||||||||||+.+|+++++++++.|.+.+++.++.+.++.+|+|.+.....++..+..+..++..+ ..+
T Consensus 305 v~~~~-~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 383 (455)
T cd01362 305 LSLPE-NEPGSSIMPGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKC 383 (455)
T ss_pred EECCC-CCCCCCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99997 6999999999999999999999999999999999999988788888888765556666677777666666 599
Q ss_pred HhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhc
Q 010020 403 AQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEY 481 (520)
Q Consensus 403 l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ 481 (520)
+++|+||++||++|+..++.+++++++ |+|||+||++ ++.+.++|.++.++..++ ..+ ++++.++
T Consensus 384 l~~L~v~~~rm~~~l~~~~~~~~~La~-----~ig~~~A~~l----~~~a~~~~~~l~~~~~~~-----~~~~~~el~~~ 449 (455)
T cd01362 384 VAGIEPNRERIAELLERSLMLVTALNP-----HIGYDKAAKI----AKKAHKEGLTLKEAALEL-----GYLTEEEFDRL 449 (455)
T ss_pred HccCEECHHHHHHHHHhcchhHHHhcc-----ccCHHHHHHH----HHHHHHcCCCHHHHHHhc-----CCCCHHHHHHh
Confidence 999999999999999988888777776 6899999877 667788899999987754 333 5668899
Q ss_pred cChhH
Q 010020 482 LGVEN 486 (520)
Q Consensus 482 ldp~~ 486 (520)
+||++
T Consensus 450 ~dp~~ 454 (455)
T cd01362 450 VDPEK 454 (455)
T ss_pred cCccc
Confidence 99984
No 29
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=9.8e-81 Score=654.02 Aligned_cols=364 Identities=21% Similarity=0.248 Sum_probs=331.7
Q ss_pred HHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCchhhhHHHHH
Q 010020 70 VTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAAL 149 (520)
Q Consensus 70 ~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l 149 (520)
+.++...|++.. ++++.+.++.||++||.++|+||++++++|.++++.+..... .. ....+||+ +++|+.|
T Consensus 4 ~~~~~~~fs~~~-----~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~~~~--~~-~~~~~~dv-~~~e~~L 74 (387)
T cd01360 4 RPEMKKIWSEEN-----KFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVERVK--EI-EAETKHDV-IAFVTAI 74 (387)
T ss_pred chHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHHHHH--HH-HHHhCCCh-HHHHHHH
Confidence 678888998764 456788899999999999999999999999999875433221 11 11347888 8899999
Q ss_pred HHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHH
Q 010020 150 TDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAY 229 (520)
Q Consensus 150 ~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~ 229 (520)
++++|+.|+|||+|+|||||++|+++|++|+++..+.+.|.+++++|.++|++|++|+||||||+|||||||||||+++|
T Consensus 75 ~~~~g~~~~~lH~G~S~nDi~~ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~l~~~ 154 (387)
T cd01360 75 AEYCGEAGRYIHFGLTSSDVVDTALALQLREALDIILKDLKELLEVLKKKALEHKDTVMVGRTHGIHAEPTTFGLKFALW 154 (387)
T ss_pred HHHHHHhhhheeCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeehhhcCCcceeehHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCCccccCCCCCC-ccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 010020 230 VEQLERDAGRLQDCRVRMNFCPLGACALAGTGLP-IDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSR 308 (520)
Q Consensus 230 ~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~-~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~L~r 308 (520)
+++|.|+.+||.+++++++.+||||++++|++++ .++++++++|||+.+..| +++++||+++|++++++.++++|+|
T Consensus 155 ~~~L~r~~~rL~~~~~~~~~~~lgga~Gt~~~~~~~~~~~~a~~LG~~~~~~~--~~~~~rD~~~e~~~~la~~~~~L~r 232 (387)
T cd01360 155 YAEFKRHLERLKEARERILVGKISGAVGTYANLGPEVEERVAEKLGLKPEPIS--TQVIQRDRHAEYLSTLALIASTLEK 232 (387)
T ss_pred HHHHHHHHHHHHHHHHHhHhhccchHhhcCccCCHHHHHHHHHHcCCCCCCCC--CcccCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887788888 589999999999987655 3679999999999999999999999
Q ss_pred HHHHHHHHhccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccc---ccc
Q 010020 309 LGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQED---KEP 384 (520)
Q Consensus 309 ia~Dl~ll~s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~---~~~ 384 (520)
||+||++|+++|||||..|. .+++|||||||||||+.+|+++++|+.+.|.+.+++ +++|++|+||+++. |..
T Consensus 233 ia~Dl~~~s~~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~~a~~~~g~~~~~~---~~~~~~~~rd~~~~~~~~~~ 309 (387)
T cd01360 233 IATEIRHLQRTEVLEVEEPFSKGQKGSSAMPHKRNPILSENICGLARVIRSNVIPAL---ENVALWHERDISHSSVERVI 309 (387)
T ss_pred HHHHHHHHhhccccceecCCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---hhhHHhcCCCcchhHHHHHH
Confidence 99999999999999887664 356999999999999999999999999999987544 56689999999864 779
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcc--cChhHHHHHHHHHHHcCCChhhHHHHHHH
Q 010020 385 TFDSVKTIVGMLEVSAEFAQNITFNVERIKKALP--AGYLDATTLADYLVNKQVPFRTSHDIVGK 447 (520)
Q Consensus 385 l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~--~~~~~at~la~~Lv~~G~~fr~Ah~~v~~ 447 (520)
+++++..+..++..+..++++|+||++||++++. ++++++|++++.|+++|+|||+||++|++
T Consensus 310 l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 310 LPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVLLALVEKGMSREEAYEIVQR 374 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999996 49999999999999999999999999999
No 30
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=3.7e-79 Score=654.00 Aligned_cols=420 Identities=22% Similarity=0.267 Sum_probs=370.9
Q ss_pred cccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHH-------HHHHHhcCC
Q 010020 59 VKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDE-------IERQIEAGK 131 (520)
Q Consensus 59 ~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~-------i~~~~~~~~ 131 (520)
+.+++.+|+ +.++...|++.. ++++.+.+++|+|++|+++|+||++.+++|.++|++ +..+....
T Consensus 5 ~~~~~~~~~--~~~~~~i~s~~~-----~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~~~~d~~~~~~~~~~~- 76 (452)
T PRK09053 5 ARLTDLYFG--SPAMRAIFSDRA-----TVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDAERLDLDALAQAAALA- 76 (452)
T ss_pred chhhhhhcC--CHHHHHHcCcHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccccCCCHHHHHHHHhhc-
Confidence 456677884 678999998764 566788899999999999999999999999998753 22222122
Q ss_pred cccccCCCchhhhHHHHHHHHhC----CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 010020 132 FMWRTDREDVHMNIEAALTDIIG----EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLI 207 (520)
Q Consensus 132 ~~~~~~~~dv~~~ie~~l~e~~g----~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~ 207 (520)
++++ +++++.+.+.+| +.++|||+|+||||++||+++|++|+++..+.+.|..++++|.++|++|+||+
T Consensus 77 ------~~~~-~~lv~~l~~~~~~~~~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~ 149 (452)
T PRK09053 77 ------GNLA-IPLVKQLTAQVAARDAEAARYVHWGATSQDIIDTGLVLQLRDALDLLEPDLDRLCDALATLAARHRATP 149 (452)
T ss_pred ------CCch-HHHHHHHHHHhcccCcchhccccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCe
Confidence 3334 567888999995 56899999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCC-----CCCccHHHHHHhcCCCCCCCCc
Q 010020 208 VPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGT-----GLPIDRFMTAEALEFTAPMRNS 282 (520)
Q Consensus 208 m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt-----~~~~~r~~la~~LG~~~~~~n~ 282 (520)
||||||+|||+|||||||+++|+++|.|+++||.+++++++.+||||++++++ ++++ ++++|+.|||+.|..
T Consensus 150 ~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGgavGt~~~~~~~~~~v-~~~~a~~LGl~~~~~-- 226 (452)
T PRK09053 150 MVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGGAAGTLASLGEQALPV-AQALAAELQLALPAL-- 226 (452)
T ss_pred eehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccchhhcccccccchHHH-HHHHHHHcCCCCCCC--
Confidence 99999999999999999999999999999999999999999999998754322 3445 578999999998765
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHH
Q 010020 283 IDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLV 361 (520)
Q Consensus 283 ~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~ 361 (520)
+|+++||++++++++++.++++|+|||+||++|+++|||||.+| +.+++|||||||||||+.+|.++++|+++.|++.
T Consensus 227 -~~~~~rD~~~e~~~~la~la~~L~kia~Di~ll~~~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~i~~~a~~v~g~~~ 305 (452)
T PRK09053 227 -PWHTQRDRIAEFASALGLLAGTLGKIARDVSLLMQTEVGEVFEPAAAGKGGSSTMPHKRNPVGCAAVLTAATRAPGLVA 305 (452)
T ss_pred -CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhccccCCCCCcCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999655 5678999999999999999999999999999999
Q ss_pred HHHHHHccCcccccccc---ccccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhc--ccChhHHHHHHHHHHHcCC
Q 010020 362 TLLTLCKGLPLAYNRDL---QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKAL--PAGYLDATTLADYLVNKQV 436 (520)
Q Consensus 362 ~~~~~~~~~p~~~erD~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~~~~~at~la~~Lv~~G~ 436 (520)
+++. +++.+||||. +.+|..+++++..+..++..+..++++|+||++||++|+ ..++++++.++..|+.+ +
T Consensus 306 ~~~~---~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae~~~~~La~~-l 381 (452)
T PRK09053 306 TLFA---AMPQEHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAEAVMLALADR-I 381 (452)
T ss_pred HHHH---hChhhhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHHHHHHHHHhc-c
Confidence 8865 3478999997 677899999999999999999999999999999999999 56899999999999887 8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHHHHH
Q 010020 437 PFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSW 509 (520)
Q Consensus 437 ~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~~ 509 (520)
++++||++|+++++.+.++|+++.+++.++ +.+...+ ++++.+++||+. |.|.++.++++++++.
T Consensus 382 gr~~Ah~iV~~~~~~a~~~g~~~~~~~~~~-~~~~~~l~~~~l~~~l~P~~-------~~g~~~~~~~~~~~~~ 447 (452)
T PRK09053 382 GRLDAHHLVEQASKRAVAEGRHLRDVLAED-PQVSAHLSPAALDRLLDPAH-------YLGQAHAWVDRVLAEH 447 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCHHHHHHhC-hhhhccCCHHHHHHHcCHHH-------HhcchHHHHHHHHHHh
Confidence 899999999999999999999999998865 3444444 567899999996 9999999999997544
No 31
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=4.8e-80 Score=648.53 Aligned_cols=355 Identities=25% Similarity=0.263 Sum_probs=327.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccc-cCCCchhhhHHHHHHHHhCC-CCCcccC
Q 010020 85 KALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR-TDREDVHMNIEAALTDIIGE-PAKKLHT 162 (520)
Q Consensus 85 ~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~-~~~~dv~~~ie~~l~e~~g~-~g~~lH~ 162 (520)
..++++++.+++||+++|+++|+||++++++|.++++.+..+... -.... ..+||+ +++|++|++++|+ .|+|||+
T Consensus 8 ~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~d~~~-~~~~~~~~~~~v-~~~e~~L~~~~g~~~~~~vH~ 85 (381)
T cd01595 8 ENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEIDAER-IAEIEKETGHDV-IAFVYALAEKCGEDAGEYVHF 85 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccCCHHH-HHHHHHHhCcCc-HHHHHHHHHHhhhHhhhHeec
Confidence 467889999999999999999999999999999998876322111 01122 348898 9999999999995 8999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHH
Q 010020 163 ARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQD 242 (520)
Q Consensus 163 G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~ 242 (520)
|+||||+++|+++|++|+++..+.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+
T Consensus 86 g~S~nDi~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G~~~~~~~~~L~r~~~rL~~ 165 (381)
T cd01595 86 GATSQDINDTALALQLRDALDIILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFGKKFAVWAAELLRHLERLEE 165 (381)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCccccCCCCC----CccHHHHHHhcCCCCCCCCcccccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010020 243 CRVRMNFCPLGACALAGTGL----PIDRFMTAEALEFTAPMRNSIDAVS-DRDFVLEFLSANSIIAIHLSRLGEEWVLWA 317 (520)
Q Consensus 243 ~~~r~~~~plGg~a~~Gt~~----~~~r~~la~~LG~~~~~~n~~~~~~-~rd~~~e~~~~la~la~~L~ria~Dl~ll~ 317 (520)
++++++.+||||++++|+++ +.+++++|+.|||..+ .++|+. +||+++|++++++.++++|+|||+||++|+
T Consensus 166 ~~~~~~~~~lGga~G~g~~~~~~~~~~~~~~a~~LGl~~~---~~~~~~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~ 242 (381)
T cd01595 166 ARERVLVGGISGAVGTHASLGPKGPEVEERVAEKLGLKVP---PITTQIEPRDRIAELLSALALIAGTLEKIATDIRLLQ 242 (381)
T ss_pred HHHhchhhhcccHhhhHhhcCCcHHHHHHHHHHHcCCCCC---CCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988777777 7889999999999643 457765 999999999999999999999999999999
Q ss_pred ccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccc---cccHHHHHHHHH
Q 010020 318 SEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQED---KEPTFDSVKTIV 393 (520)
Q Consensus 318 s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~---~~~l~~~~~~~~ 393 (520)
|+|||||.+|. ++++|||||||||||+.+|.++++++++.|++.+++.++ |++||||+++. |..+++++..+.
T Consensus 243 s~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~erd~~~~~~~~~~l~~~~~~~~ 319 (381)
T cd01595 243 RTEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL---VQWHERDLSDSSVERNILPDAFLLLD 319 (381)
T ss_pred hccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh---hHhhccCCcHHHHHHHHHHHHHHHHH
Confidence 99999999996 679999999999999999999999999999999998877 78999999754 689999999999
Q ss_pred HHHHHHHHHHhhcccCHHHHHHhccc--ChhHHHHHHHHHHHcCCChhhHHHHHHH
Q 010020 394 GMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGK 447 (520)
Q Consensus 394 ~~l~~~~~~l~~l~vn~erm~~~l~~--~~~~at~la~~Lv~~G~~fr~Ah~~v~~ 447 (520)
.++..+..++++|+||++||++++.. |++++|.+++.|+++|+|||+||++|++
T Consensus 320 ~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~~ 375 (381)
T cd01595 320 AALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVKE 375 (381)
T ss_pred HHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHHH
Confidence 99999999999999999999999976 7899999999999999999999999998
No 32
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.9e-78 Score=645.10 Aligned_cols=418 Identities=22% Similarity=0.246 Sum_probs=363.7
Q ss_pred ccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCCCHHh
Q 010020 34 LSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLISDSD 112 (520)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~ 112 (520)
-+.|++|.+++|.+.+| |+ ++++.+.+|+.+. .++..++++++.++.||++||++.|+||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~------------g~----~~~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~~~Giip~~~ 65 (450)
T cd01596 2 IEKDSLGEVEVPADAYY------------GA----QTQRALENFPISGERMPPELIRALALVKKAAALANAELGLLDEEK 65 (450)
T ss_pred CCcccCCCCCCcccccc------------cH----hHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
Confidence 36789999998777755 45 7899999999664 6778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccc----CCCchhhhHHH----HHHHHhC-CCCCc--------ccCCCCchhHHHHHHH
Q 010020 113 KNSILRGLDEIERQIEAGKFMWRT----DREDVHMNIEA----ALTDIIG-EPAKK--------LHTARSRNDQVLTDFR 175 (520)
Q Consensus 113 a~~I~~al~~i~~~~~~~~~~~~~----~~~dv~~~ie~----~l~e~~g-~~g~~--------lH~G~S~nDi~~Ta~~ 175 (520)
+++|.++|+++.++...+.|+.++ ..+|+|++++. .+.+.+| ..|+| +|+|+|||||++|+++
T Consensus 66 a~~I~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~h~~~~v~h~g~SrnD~v~t~~~ 145 (450)
T cd01596 66 ADAIVQACDEVIAGKLDDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKYPVHPNDDVNNSQSSNDDFPPAAHI 145 (450)
T ss_pred HHHHHHHHHHHHcCcccCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCcccCCCcccCCCCCCchHHHHHHHH
Confidence 999999999997654456777654 48999999986 3346778 56888 6699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCcc
Q 010020 176 LWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGAC 255 (520)
Q Consensus 176 L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~ 255 (520)
|++|+++..+.+.|.+++++|.++|++|+||+||||||+|+|||||||||+++|+++|.|+++||.+++++++.+|||||
T Consensus 146 L~lr~~l~~l~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~ 225 (450)
T cd01596 146 AAALALLERLLPALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGT 225 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccHHH-------HHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---Cccee
Q 010020 256 ALAGTGLPIDRFM-------TAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASE---EFGFI 324 (520)
Q Consensus 256 a~~Gt~~~~~r~~-------la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~---e~gev 324 (520)
|+ ||++++++++ +|++|||+ .+..|++||+++||+++++++++++++++|+|||+||++|+|+ |||||
T Consensus 226 A~-Gt~~~~~~~~~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev 304 (450)
T cd01596 226 AV-GTGLNAPPGYAEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEI 304 (450)
T ss_pred ce-eCCCCCChhHHHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeE
Confidence 87 9999999865 79999999 4778899999999999999999999999999999999999955 79999
Q ss_pred eccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH-HHH
Q 010020 325 TPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA-EFA 403 (520)
Q Consensus 325 ~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~-~~l 403 (520)
.+|+ +++|||||||||||+.+|.|+++++++.|.+++++...++.+++++.+.+.....++..+..+..++..+. .++
T Consensus 305 ~~~~-~~~GSS~MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 383 (450)
T cd01596 305 NLPA-NQPGSSIMPGKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCV 383 (450)
T ss_pred ECCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 89999999999999999999999999999999999666654444333322222346777777777777776 899
Q ss_pred hhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCCh-HHHHhcc
Q 010020 404 QNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFD-KDVYEYL 482 (520)
Q Consensus 404 ~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~~-~~~~~~l 482 (520)
++|+||++||++|+..++.+++++++.| +|+.++++++++.++|+++.++..++ +++. +++.+++
T Consensus 384 ~~l~v~~~rm~~~l~~~~~~~t~LA~~l---------g~~~a~~~v~~a~~~g~~l~~~~~~~-----~~~~~~~l~~~~ 449 (450)
T cd01596 384 EGIEANEERCKEYVENSLMLVTALNPHI---------GYEKAAEIAKEALKEGRTLREAALEL-----GLLTEEELDEIL 449 (450)
T ss_pred ccCEECHHHHHHHHHhCcchHHHHhHHH---------hHHHHHHHHHHHHHcCCCHHHHHHHh-----CCCCHHHHHHHh
Confidence 9999999999999999999999999998 56666668888889999999988754 4443 4455555
Q ss_pred C
Q 010020 483 G 483 (520)
Q Consensus 483 d 483 (520)
|
T Consensus 450 d 450 (450)
T cd01596 450 D 450 (450)
T ss_pred C
Confidence 4
No 33
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3e-77 Score=622.37 Aligned_cols=414 Identities=23% Similarity=0.296 Sum_probs=370.4
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHH-------HHHHHHHhcCCcccc
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGL-------DEIERQIEAGKFMWR 135 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al-------~~i~~~~~~~~~~~~ 135 (520)
.+||+ +.++...|++.+++. +.++++.|++++++++|+||+++++.|.+++ ++|.+....
T Consensus 2 ~~RY~--~~em~~ifS~~~~~~-----~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie~~------ 68 (438)
T COG0015 2 DGRYS--SPEMRAIFSEEAKLR-----AWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIEAE------ 68 (438)
T ss_pred CcccC--cHHHHHHcCHHHHHH-----HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHHHH------
Confidence 36885 589999999887665 5567789999999999999999999998885 344433222
Q ss_pred cCCCchhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccC
Q 010020 136 TDREDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHL 214 (520)
Q Consensus 136 ~~~~dv~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~ 214 (520)
.+||| +++++.|.+.|| +.++|||+|+|||||+||++.|++|++++.|.+.|.++++.|.++|.+|+||||+||||+
T Consensus 69 -t~HdV-~a~v~~l~e~~~~~~~~~VH~GaTS~DI~Dta~~L~lk~a~~ii~~~l~~l~~~L~~~A~~~k~t~m~GRTHg 146 (438)
T COG0015 69 -TGHDV-KALVRALAEKVGEEASEYVHFGATSQDIIDTALALQLKEALDLILPDLKRLIEALAELALEHKDTPMLGRTHG 146 (438)
T ss_pred -hCCCc-HHHHHHHHHhcCcccccceecccchHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeecccccC
Confidence 37888 999999999999 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCc------cHHHHHHhcCCCCCCCCccccccc
Q 010020 215 QRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPI------DRFMTAEALEFTAPMRNSIDAVSD 288 (520)
Q Consensus 215 Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~------~r~~la~~LG~~~~~~n~~~~~~~ 288 (520)
|||+|||||++++.|++++.|+++||.++.+++..+++||++ ||...+ .++++++.|||..+... .|+.+
T Consensus 147 q~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~Ga~--Gt~Aa~~~~~~~ve~~v~e~LGL~~~p~s--tq~~~ 222 (438)
T COG0015 147 QPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGGAV--GTLAALGDLGAEVEERVAEKLGLKPAPIS--TQVSP 222 (438)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccch--hhHhhcCchhHHHHHHHHHHcCCCCCCCC--ccccc
Confidence 999999999999999999999999999999999999999755 554333 25789999999965542 49999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHH
Q 010020 289 RDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLC 367 (520)
Q Consensus 289 rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~ 367 (520)
||+++|+.++|+.++++|.|||.||++|+++|++|++.| .++++|||+|||||||+.+|++.++++.+.+++..++..+
T Consensus 223 RD~~ae~~~~La~i~~sl~k~a~dIr~l~~~e~~Ev~E~f~~gq~GSSaMPHKrNPi~~E~~~glar~~r~~~~~~~e~~ 302 (438)
T COG0015 223 RDRIAEFFSALALLAGSLEKFARDIRLLQRTEVGEVEEPFAKGQVGSSAMPHKRNPIDSENVTGLARVARALVSTLLENL 302 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999877 5789999999999999999999999999999999888766
Q ss_pred ccCccccccccc---cccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhc--ccChhHHHHHHHHHHHcCCChhhHH
Q 010020 368 KGLPLAYNRDLQ---EDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKAL--PAGYLDATTLADYLVNKQVPFRTSH 442 (520)
Q Consensus 368 ~~~p~~~erD~~---~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l--~~~~~~at~la~~Lv~~G~~fr~Ah 442 (520)
++|||||+. .+|..||+++.++..+|..+..++++|+||+++|++|+ ..|+++++.++..|+++|+++++||
T Consensus 303 ---~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~~gli~se~v~~~l~~~g~~Re~a~ 379 (438)
T COG0015 303 ---VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLTLGLIASERVMLALRKKGMGREEAH 379 (438)
T ss_pred ---HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhccchhhhHHHHHHHHhcCCCHHHHH
Confidence 899999985 46789999999999999999999999999999999999 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCccHHHHHHHH
Q 010020 443 DIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGSTGSACVTEQL 506 (520)
Q Consensus 443 ~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l 506 (520)
++|++.++.+.++++++.++.+++ .++.+++ ++++.+++||.. |.|.+++.+++++
T Consensus 380 elvr~~a~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~~dp~~-------y~G~a~~i~~r~~ 436 (438)
T COG0015 380 ELVREKAMKAWEQGKEFLELLLAD-ERVTKYLSEEELLELLDPAN-------YLGRADEIVERVV 436 (438)
T ss_pred HHHHHHHHHHHHhccchHHHhccc-hhhhccCcHHHHHHcCCHHH-------HhhHHHHHHHHHh
Confidence 999999999999999997776654 3455666 567777999996 9999988888765
No 34
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=7.8e-77 Score=632.55 Aligned_cols=402 Identities=15% Similarity=0.136 Sum_probs=352.9
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCC-CCHHhHHHHHHHHH-----HHHHHHhcCCccccc
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGL-ISDSDKNSILRGLD-----EIERQIEAGKFMWRT 136 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~Gi-I~~~~a~~I~~al~-----~i~~~~~~~~~~~~~ 136 (520)
.|||+ +.++...|++..++ ...++++.|+++++++.|+ ||++.+++|.+++. +|.+... .
T Consensus 2 ~~ry~--~~~~~~~fs~~~~~-----~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~d~~~i~~~e~-------~ 67 (436)
T cd03302 2 ASRYA--SKEMVYIFSPRKKF-----STWRKLWLWLAEAEKELGLDISDEQIEEMKANVENIDFEIAAAEEK-------K 67 (436)
T ss_pred CCCcC--CHHHHHHcChHHHH-----HHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcCCHHHHHHHHH-------H
Confidence 46885 67999999987544 4677788999999999999 99999999988762 2222221 2
Q ss_pred CCCchhhhHHHHHHHHhCCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCC
Q 010020 137 DREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 216 (520)
Q Consensus 137 ~~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~ 216 (520)
.+||+ .++++.|.+.+|+.|+|||+|+||||+++|++.|++|+++..+.+.|..++++|.++|++|+||+||||||+||
T Consensus 68 ~~hdv-~a~~~~l~~~~~~~~~~vH~G~TS~Di~dta~~L~lr~a~~~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~ 146 (436)
T cd03302 68 LRHDV-MAHVHAFGLLCPAAAGIIHLGATSCFVTDNTDLIQIRDALDLILPKLAAVIDRLAEFALEYKDLPTLGFTHYQP 146 (436)
T ss_pred hCcCc-hHHHHHHHHHhHhccCeeeeCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCc
Confidence 37777 66888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCcccc----CCCCCCccH-------HHHHHhcCCCCCCCCcccc
Q 010020 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACAL----AGTGLPIDR-------FMTAEALEFTAPMRNSIDA 285 (520)
Q Consensus 217 A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~----~Gt~~~~~r-------~~la~~LG~~~~~~n~~~~ 285 (520)
|+|||||||+++|+++|.|+++||.+++++++.+++||++. .|+.++.|| +++++.|||..+. |...+
T Consensus 147 A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~GavGt~a~~~~~~~~dr~~~~~v~~~~a~~LGl~~~~-~~~~~ 225 (436)
T cd03302 147 AQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKGTTGTQASFLDLFEGDHDKVEALDELVTKKAGFKKVY-PVTGQ 225 (436)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcChhhhhHHHHhcCCchHHHHHHHHHHHHHHcCCCCCC-Cchhh
Confidence 99999999999999999999999999999999877776432 245567776 6899999999774 33346
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHH
Q 010020 286 VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLL 364 (520)
Q Consensus 286 ~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~ 364 (520)
+.+||+++|++++++.++++|+|||+||++|+| +||+.+|. .+++|||||||||||+.+|+++++|+++.|++.+++
T Consensus 226 v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s--~~el~e~~~~g~~GSS~MPhKrNPv~~E~i~~~a~~~~g~~~~~~ 303 (436)
T cd03302 226 TYSRKVDIDVLNALSSLGATAHKIATDIRLLAN--LKEVEEPFEKGQIGSSAMPYKRNPMRSERCCSLARHLMNLASNAA 303 (436)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CceecccccCCCCCcccCCCccCcHHHHHHHHHHHHHHhhHHHHH
Confidence 799999999999999999999999999999999 89998773 468999999999999999999999999999999988
Q ss_pred HHHccCccccccccc---cccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhccc--ChhHHHHHHHHHHHcCCChh
Q 010020 365 TLCKGLPLAYNRDLQ---EDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFR 439 (520)
Q Consensus 365 ~~~~~~p~~~erD~~---~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~--~~~~at~la~~Lv~~G~~fr 439 (520)
.... ..+||||+. .+|..+++++..+..++..+..++++|+||++||++|+.. |+++++++++.|+++|+|||
T Consensus 304 ~~~~--~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~g~~~se~~~~~L~~~g~~~~ 381 (436)
T cd03302 304 QTAS--TQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQELPFMATENIIMAAVKAGGDRQ 381 (436)
T ss_pred HHhh--ccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHcCCCHH
Confidence 5443 469999974 4567899999999999999999999999999999999954 78999999999999999999
Q ss_pred hHHHHHHHHHHHHHHc------CCChhHhhHHHHhhcCCCChHHHHhccChhH
Q 010020 440 TSHDIVGKAVALCVSK------ECQLQDLSLDEMRSLNPVFDKDVYEYLGVEN 486 (520)
Q Consensus 440 ~Ah~~v~~~v~~a~~~------g~~l~el~~~~~~~~~~~~~~~~~~~ldp~~ 486 (520)
+||++|+++++++.++ |++|.|++.++ +.+.. ..+++..++||+.
T Consensus 382 ~Ah~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~l~~~~dp~~ 432 (436)
T cd03302 382 DAHERIRVLSHQAAAVVKQEGGDNDLIERIKND-AYFKP-IWDELDALLDPKT 432 (436)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCHHHHHhcC-CCcCC-CHHHHHHHhCHHh
Confidence 9999999999999999 99999998753 44555 5567899999996
No 35
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=1.7e-75 Score=602.52 Aligned_cols=321 Identities=40% Similarity=0.541 Sum_probs=305.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCchhhhHHHHHHHHhCCC-CCcccCCCCch
Q 010020 89 KHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVHMNIEAALTDIIGEP-AKKLHTARSRN 167 (520)
Q Consensus 89 ~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~~~ie~~l~e~~g~~-g~~lH~G~S~n 167 (520)
++++.+++||+++|.++|+||++++++|.+++.++..+.....+...+..+|.|+++|++|.+++|+. ++|||+|+|||
T Consensus 2 ~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~g~~~~~~lH~G~S~n 81 (325)
T cd01334 2 RADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIAADQVEQEGSGTHDVMAVEEVLAERAGELNGGYVHTGRSSN 81 (325)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCccccCeeeCCCCccHHHHHHHHHHHHhccccCCCCccCCCCc
Confidence 46788999999999999999999999999999998766433333556679999999999999999954 99999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhh
Q 010020 168 DQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRM 247 (520)
Q Consensus 168 Di~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~ 247 (520)
|+++|+++|++|+++..+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.++++++
T Consensus 82 Di~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~ 161 (325)
T cd01334 82 DIVDTALRLALRDALDILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAAWAAELERDLERLEEALKRL 161 (325)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccCCCCC--CccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceee
Q 010020 248 NFCPLGACALAGTGL--PIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT 325 (520)
Q Consensus 248 ~~~plGg~a~~Gt~~--~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~ 325 (520)
+.+|||+||++|+++ +++++++|+.|||..+..|+++++++||+++|++++++.++++|+|||+|+++|+++||||+.
T Consensus 162 ~~~~lG~gA~g~~~~~~~~~~~~~a~~LG~~~~~~~~~~a~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~~e~gev~ 241 (325)
T cd01334 162 NVLPLGGGAVGTGANAPPIDRERVAELLGFFGPAPNSTQAVSDRDFLVELLSALALLAVSLSKIANDLRLLSSGEFGEVE 241 (325)
T ss_pred hhcCCcHhHHhCcCCCCcchHHHHHHHhcCcCcCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEE
Confidence 999999889888889 999999999999987888888889999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHHHHHhh
Q 010020 326 PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQN 405 (520)
Q Consensus 326 l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 405 (520)
+|+..++|||||||||||+.+|.++++++++.|...+++.++.+.+..|++|++.+|..+++++..+..++..+..++++
T Consensus 242 ~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 321 (325)
T cd01334 242 LPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDSPVEREALPDSFDLLDAALRLLTGVLEG 321 (325)
T ss_pred CCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99877999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred cccC
Q 010020 406 ITFN 409 (520)
Q Consensus 406 l~vn 409 (520)
|+||
T Consensus 322 l~v~ 325 (325)
T cd01334 322 LEVN 325 (325)
T ss_pred CEeC
Confidence 9987
No 36
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.5e-71 Score=590.85 Aligned_cols=408 Identities=17% Similarity=0.161 Sum_probs=337.7
Q ss_pred ccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCC---CCHHhHHH---HHHHHHHHHHHHhcCCcc
Q 010020 60 KLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGL---ISDSDKNS---ILRGLDEIERQIEAGKFM 133 (520)
Q Consensus 60 ~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~Gi---I~~~~a~~---I~~al~~i~~~~~~~~~~ 133 (520)
..|++||+..+.++...|++. .++++++.++.|+++++++.|+ ||+..++. |.+.+.++ ..+.+.
T Consensus 10 ~p~~~ry~~~~~e~~~~~s~~-----~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~----~~~d~~ 80 (456)
T PRK09285 10 SPLDGRYASKTAALRPIFSEF-----GLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENF----SEEDAA 80 (456)
T ss_pred CCCccccCCCCHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhh----CcccHH
Confidence 468889975558899999874 5677899999999999999999 88877777 76654222 111111
Q ss_pred c-----ccCCCchhhhHHHHHHHHhC------CCCCcccCCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 010020 134 W-----RTDREDVHMNIEAALTDIIG------EPAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLAL 201 (520)
Q Consensus 134 ~-----~~~~~dv~~~ie~~l~e~~g------~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~lA~ 201 (520)
. ...+||+ +++++.|.+.+| +.++|||+|+|||||+||+++|++|+++.. +.+.|..++++|.++|+
T Consensus 81 ~i~~~e~~~~hdv-~a~~~~l~~~~~~~~~~~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~ 159 (456)
T PRK09285 81 RIKEIERTTNHDV-KAVEYFLKEKLAGLPELEAVSEFIHFACTSEDINNLSHALMLKEAREEVLLPALRELIDALKELAH 159 (456)
T ss_pred HHHHHHHHhCCCh-HHHHHHHHHHhcccCcchhHHhHccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1236777 899999999997 468999999999999999999999999998 99999999999999999
Q ss_pred HcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCC---C---C------ccHHHH
Q 010020 202 KNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG---L---P------IDRFMT 269 (520)
Q Consensus 202 ~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~---~---~------~~r~~l 269 (520)
+|+||+||||||+|||+|||||||+++|+++|.|+++||.++ ...+++|| ++ ||. + + +++. +
T Consensus 160 ~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-Av-Gt~~a~~~~~~~~~~~~v~~~-~ 233 (456)
T PRK09285 160 EYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AV-GNYNAHLAAYPEVDWHAFSRE-F 233 (456)
T ss_pred HcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-cc-ccHHHHhhhcCCccHHHHHHH-H
Confidence 999999999999999999999999999999999999999998 35566664 43 442 1 3 5444 4
Q ss_pred HHhcCCCCCCCCcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceee-ccCCCCCCCCCCCCCCCchhHH
Q 010020 270 AEALEFTAPMRNSIDA-VSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT-PSDSVSTGSSIMPQKKNPDPME 347 (520)
Q Consensus 270 a~~LG~~~~~~n~~~~-~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~-l~~~~~~GSSiMPqKrNP~~~E 347 (520)
++.|||..+ +++| +.+||++++++++++.++++|+|||+||++|++ +||+. .++++++|||||||||||+.+|
T Consensus 234 ~~~LGL~~~---~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~~~~~~~GSS~MPhKrNPv~~E 308 (456)
T PRK09285 234 VESLGLTWN---PYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQKTKAGEIGSSTMPHKVNPIDFE 308 (456)
T ss_pred HHHhCCCCC---CCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhccCCCCCCCCCCCCCCcCchHHH
Confidence 559999863 4577 599999999999999999999999999999999 56653 3356899999999999999999
Q ss_pred HhhhhHhhhhccHHHHHHHHccCcccccccccc---ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHH
Q 010020 348 LVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE---DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDA 424 (520)
Q Consensus 348 ~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~---~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~a 424 (520)
+++++++.+.+.+..++..+. .++||||++. +|.. ++++..+..+++.+..++++|+||++||++|+..++.+.
T Consensus 309 ~i~~~a~~~~~~~~~~~~~~~--~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~~~rm~~nl~~~~~~~ 385 (456)
T PRK09285 309 NSEGNLGLANALLEHLAAKLP--ISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVNEARLAEDLDANWEVL 385 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhcc--HHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCcch
Confidence 999999999988888776441 4789999875 4555 999999999999999999999999999999995433344
Q ss_pred HHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHh---hHHHHhhcCCCChHHHHhccChhHhhhhcccCCCccHHH
Q 010020 425 TTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDL---SLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSAC 501 (520)
Q Consensus 425 t~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el---~~~~~~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~ 501 (520)
++.++.++++ +++.+||++|+++++.+.++|++|.++ +.++ +. +.+++ .++||+. |.|.++.+
T Consensus 386 sE~~~~~l~~-~gr~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~-~~----~~~~l-~~~~p~~-------ylg~a~~~ 451 (456)
T PRK09285 386 AEPIQTVMRR-YGIENPYEKLKELTRGKRITAEALREFIDGLDLP-EE----AKARL-KALTPAN-------YIGLAAEL 451 (456)
T ss_pred HHHHHHHHHH-hChHhHHHHHHHHHHHHHhccCCHHHHHHHhcCC-Hh----HHHHH-HcCCHHH-------HHhhHHHH
Confidence 4455555555 888899999999999999999999998 5432 22 22678 9999996 99999998
Q ss_pred HHHH
Q 010020 502 VTEQ 505 (520)
Q Consensus 502 v~~~ 505 (520)
++++
T Consensus 452 ~~~~ 455 (456)
T PRK09285 452 ADEI 455 (456)
T ss_pred HHhh
Confidence 8764
No 37
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-71 Score=551.99 Aligned_cols=427 Identities=22% Similarity=0.248 Sum_probs=387.4
Q ss_pred ccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hcc--HHHHHHHHHHHHHHHHHHHHcCCC
Q 010020 32 SSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYD--KALYKHDIMGSKAHASMLAKQGLI 108 (520)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~--~~l~~~~i~~~~A~a~al~e~GiI 108 (520)
-+.|.|++|+.+||.+.|||+ +|.+.+++|..+. .++ ..+++..+.+++|.|.++.|+|.|
T Consensus 4 ~R~E~D~lGe~~ip~evYyGI----------------~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l 67 (471)
T COG1027 4 MRIERDLLGEREIPAEVYYGI----------------HTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGAL 67 (471)
T ss_pred chhhhhhcccccCcchhhhhh----------------HHHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCC
Confidence 357899999999999998875 7999999999775 555 799999999999999999999999
Q ss_pred CHHhHHHHHHHHHHHHHHHhcCCccccc---C-CCchhhhHH----HHHHHHhC-CCCCc--cc------CCCCchhHHH
Q 010020 109 SDSDKNSILRGLDEIERQIEAGKFMWRT---D-REDVHMNIE----AALTDIIG-EPAKK--LH------TARSRNDQVL 171 (520)
Q Consensus 109 ~~~~a~~I~~al~~i~~~~~~~~~~~~~---~-~~dv~~~ie----~~l~e~~g-~~g~~--lH------~G~S~nDi~~ 171 (520)
|++.+++|.+||++|..+...++|++++ + ++++|||.+ ++..|.+| +.|.| +| +++|+||..+
T Consensus 68 ~~~~~~aIv~ACDeil~Gk~~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yP 147 (471)
T COG1027 68 PKEIADAIVKACDEILDGKCHDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYP 147 (471)
T ss_pred CHHHHHHHHHHHHHHHcCccccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccch
Confidence 9999999999999999998999999763 3 999999976 45567889 88887 44 8999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Q 010020 172 TDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 251 (520)
Q Consensus 172 Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~p 251 (520)
|++++.+...+..+.+.+..|++++..++++|.|++++||||+|+|+|+|+|++|.+|+..|.||+.||.++.+++....
T Consensus 148 Ta~ria~~~~l~~L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evN 227 (471)
T COG1027 148 TAFRIAVYKSLRKLIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVN 227 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCccHHH-------HHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---
Q 010020 252 LGACALAGTGLPIDRFM-------TAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE--- 320 (520)
Q Consensus 252 lGg~a~~Gt~~~~~r~~-------la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e--- 320 (520)
+||+|+ |||.+.+++| +++.+|++ .+..|.++++++.|.++++++++..++..|+|||+||||++|+|
T Consensus 228 lGgTAi-GTGiNa~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~G 306 (471)
T COG1027 228 LGGTAI-GTGINAPKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAG 306 (471)
T ss_pred CCceee-ccCcCCChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccC
Confidence 999998 9999998765 89999999 78999999999999999999999999999999999999999999
Q ss_pred cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHH
Q 010020 321 FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSA 400 (520)
Q Consensus 321 ~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~ 400 (520)
+|||.+| +.|.||||||.|+||+++|.+.+.|..|+|+..++..+.+.-.+..|--.......+++++..+..++..|+
T Consensus 307 l~EI~LP-~~Q~GSSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ 385 (471)
T COG1027 307 LNEINLP-AVQAGSSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLR 385 (471)
T ss_pred cccccCC-CCCCCCCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 589999999999999999999999999999999998777642222222112223479999999999999998
Q ss_pred H-HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHH
Q 010020 401 E-FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDV 478 (520)
Q Consensus 401 ~-~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~ 478 (520)
+ |++||++|+++|++++.++...+|.|.+++ +|+.+.+++++|.++|++++|+.++. +.+ ++++
T Consensus 386 ekcI~gItaN~e~C~~~v~nSigivTaLnp~i---------Gy~~~~~iaK~a~~tgksv~evvLe~-----g~Lteeel 451 (471)
T COG1027 386 EKCIDGITANEERCEEYVENSIGIVTALNPYI---------GYENAAIIAKEALETGKSVREVVLER-----GLLTEEEL 451 (471)
T ss_pred HHHhhhcccCHHHHHHHHHhhhHHHHhhcccc---------cchHHHHHHHHHHHcCCcHHHHHHHh-----CCCCHHHH
Confidence 5 999999999999999999999999999888 89999999999999999999998864 344 6789
Q ss_pred HhccChhHhhhh
Q 010020 479 YEYLGVENAIRK 490 (520)
Q Consensus 479 ~~~ldp~~~v~~ 490 (520)
.++|+|+++..+
T Consensus 452 ~~Il~~~~m~~p 463 (471)
T COG1027 452 DDILSPENMTKP 463 (471)
T ss_pred HHHhChhhcCCc
Confidence 999999986654
No 38
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=3.1e-70 Score=547.86 Aligned_cols=427 Identities=21% Similarity=0.252 Sum_probs=381.6
Q ss_pred ccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccch-hccHHHHHHHHHHHHHHHHHHHHcCCCCH
Q 010020 32 SSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTESI-SYDKALYKHDIMGSKAHASMLAKQGLISD 110 (520)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~~-~~~~~l~~~~i~~~~A~a~al~e~GiI~~ 110 (520)
-++|.|++|+.+||+|+||| . +|++.+++|..+. ++++.++++...+++|.|+++.++|.+|+
T Consensus 3 ~R~E~Dt~G~i~Vpad~~wg------------A----QTqRs~~nF~ig~~~mp~~~I~Al~~lKkaaA~~N~~LG~L~~ 66 (462)
T COG0114 3 YRIEHDTMGEVEVPADALWG------------A----QTQRSLENFPIGGEKMPREIIRALGLLKKAAAQVNADLGLLDP 66 (462)
T ss_pred cccccccCccccccHHHHHH------------H----HHHHHHhcCCcccccCcHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 36899999999998888665 4 8999999999876 58999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhcCCcccc---c-CCCchhhhHHHHH----HHHhC-CCCC--ccc------CCCCchhHHHHH
Q 010020 111 SDKNSILRGLDEIERQIEAGKFMWR---T-DREDVHMNIEAAL----TDIIG-EPAK--KLH------TARSRNDQVLTD 173 (520)
Q Consensus 111 ~~a~~I~~al~~i~~~~~~~~~~~~---~-~~~dv~~~ie~~l----~e~~g-~~g~--~lH------~G~S~nDi~~Ta 173 (520)
+.+++|.+++++|.++..+++||++ . +++..|||.++.+ .+.+| +.|. .|| +|+||||+++||
T Consensus 67 ~~a~aI~~Aadev~~Gk~d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTA 146 (462)
T COG0114 67 EKADAIIAAADEVLAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTA 146 (462)
T ss_pred HHHHHHHHHHHHHHcCcccCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhH
Confidence 9999999999999999999999954 3 4999999987655 45566 4553 355 899999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCC
Q 010020 174 FRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPL 252 (520)
Q Consensus 174 ~~L~lr~~l~-~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~pl 252 (520)
+++....++. +|++.|..|.++|.++|++|.+++++||||+|+|+|+|||++|++|+..|.+.++|+..+.+.+...++
T Consensus 147 mhIAa~~~v~~~LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAi 226 (462)
T COG0114 147 MHIAAVLAVVNRLIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAI 226 (462)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999988885 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCccHH-------HHHHhcCCC-CCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---c
Q 010020 253 GACALAGTGLPIDRF-------MTAEALEFT-APMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE---F 321 (520)
Q Consensus 253 Gg~a~~Gt~~~~~r~-------~la~~LG~~-~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e---~ 321 (520)
||+|+ |||++.+++ ++++.+|++ .+..|.+.+.+++|.++++..+|..++.+|-|||+|||+|.|+| +
T Consensus 227 GGTAV-GTGlNa~p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GL 305 (462)
T COG0114 227 GGTAV-GTGLNAHPEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGL 305 (462)
T ss_pred CCccc-ccCcCCCccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 99998 999998764 488999999 46889999999999999999999999999999999999999999 7
Q ss_pred ceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHHHHH
Q 010020 322 GFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAE 401 (520)
Q Consensus 322 gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~~~~ 401 (520)
|||++|+ ..+||||||+|+||+.||.+...|.+|+|+.+++..+...-.++.|--......++.+++.++.+++..|.+
T Consensus 306 gEi~lPe-nePGSSIMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~ 384 (462)
T COG0114 306 GEIELPE-NEPGSSIMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFAD 384 (462)
T ss_pred cccccCC-CCCCccCCCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 799999999999999999999999999999999876554222222222223334789999999999999985
Q ss_pred -HHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHH
Q 010020 402 -FAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVY 479 (520)
Q Consensus 402 -~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~ 479 (520)
|+.||++|+++|.++++++.++.|.|.+.+ +|+...++++.|.++|++++|...+. +++ ++++.
T Consensus 385 ~ci~gie~n~~~i~~~l~~SlmLVTaLnp~I---------GYdkAa~IAK~A~keg~tlreaa~~~-----G~lte~efd 450 (462)
T COG0114 385 HCIVGIEPNEERIKELLERSLMLVTALNPHI---------GYDKAAKIAKKAHKEGTTLREAALEL-----GLLSEEEFD 450 (462)
T ss_pred HHhhccccCHHHHHHHHhhCchHHHhccccc---------chHHHHHHHHHHHHCCCcHHHHHHHc-----CCCCHHHHH
Confidence 999999999999999999999999999888 89999999999999999999987652 455 78899
Q ss_pred hccChhHhhhh
Q 010020 480 EYLGVENAIRK 490 (520)
Q Consensus 480 ~~ldp~~~v~~ 490 (520)
+++||+.++.+
T Consensus 451 ~~v~Pe~mv~~ 461 (462)
T COG0114 451 KLVDPEKMVGP 461 (462)
T ss_pred HhcCHHHhcCC
Confidence 99999987653
No 39
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=5.1e-71 Score=570.38 Aligned_cols=327 Identities=25% Similarity=0.278 Sum_probs=289.7
Q ss_pred cCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccCCCchh
Q 010020 63 GGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTDREDVH 142 (520)
Q Consensus 63 g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~~~dv~ 142 (520)
+.+|+ +.++...|++. .++.+.+.+++|||+||.++|+||++++++|.++|+++..+....+ .......+.+
T Consensus 3 ~~~~~--~~~~~~i~sd~-----~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~~d~~~~~-~~~~~~~~~~ 74 (338)
T TIGR02426 3 DGLFG--DPAALELFSDR-----AFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAAPDLEALA-HAAATAGNPV 74 (338)
T ss_pred ccccC--CHHHHHHcCCH-----HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCCCCHHHHH-hHHHhcCCcH
Confidence 45674 67888888875 5667889999999999999999999999999999987532211000 0001123344
Q ss_pred hhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccc
Q 010020 143 MNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVL 221 (520)
Q Consensus 143 ~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~T 221 (520)
+++|+.+.+++| +.|+|||+|+||||+++|+++|++|+++..+.+.|.+++++|.++|++|+|++||||||+|||||||
T Consensus 75 ~~~~~~l~~~~g~~~g~~vH~G~S~nD~~~Ta~~L~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T 154 (338)
T TIGR02426 75 IPLVKALRKAVAGEAARYVHRGATSQDVIDTSLMLQLRDALDLLLADLGRLADALADLAARHRDTPMTGRTLLQQAVPTT 154 (338)
T ss_pred HHHHHHHHHHhCccccCcccCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceecccCCCcCeehh
Confidence 689999999999 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCC-----CCccHHHHHHhcCCCCCCCCccccccchHHHHHHH
Q 010020 222 LQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-----LPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFL 296 (520)
Q Consensus 222 fG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~-----~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~ 296 (520)
||||+++|+++|.|+++||.+++++++.+||||++++|++ +++ ++++++.|||+.|.. +|+++||+++|++
T Consensus 155 ~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGgavGtg~~~~~~~~~v-~~~~a~~LGl~~~~~---~~~~~rd~~~e~~ 230 (338)
T TIGR02426 155 FGLKAAGWLAAVLRARDRLAALRTRALPLQFGGAAGTLAALGTRGGAV-AAALAARLGLPLPAL---PWHTQRDRIAEFG 230 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcchhccCCCccchHHHH-HHHHHHHhCcCCCCC---cchhhhHHHHHHH
Confidence 9999999999999999999999999999999997766665 334 789999999998754 3799999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 297 SANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 297 ~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
++++.++++|+|||+||++|+++||||+.+ ++++|||||||||||+.+|.++++|+++.|.+.+++.++ +.+|||
T Consensus 231 ~~l~~la~~l~ria~Dl~l~s~~e~gei~~--~~~~GSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~Er 305 (338)
T TIGR02426 231 SALALVAGALGKIAGDIALLSQTEVGEVFE--AGGGGSSAMPHKRNPVGAALLAAAARRVPGLAATLHAAL---PQEHER 305 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChhhh--CCCCCcccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc---hHhhcc
Confidence 999999999999999999999999999976 468999999999999999999999999999999988764 789999
Q ss_pred cc---ccccccHHHHHHHHHHHHHHHHHHHhhc
Q 010020 377 DL---QEDKEPTFDSVKTIVGMLEVSAEFAQNI 406 (520)
Q Consensus 377 D~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l 406 (520)
|. +.+|..+|+++.++..+|..+..++++|
T Consensus 306 ~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 306 SLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 96 5689999999999999999999999876
No 40
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=1.6e-69 Score=560.74 Aligned_cols=333 Identities=21% Similarity=0.199 Sum_probs=292.7
Q ss_pred ccccccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccccC
Q 010020 58 EVKLWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWRTD 137 (520)
Q Consensus 58 ~~~~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~~~ 137 (520)
++.+++.+|+ +.++...|++.. ++.+.+.+++|+|++|+++|+||++.+++|.++++++..+...-.-.....
T Consensus 7 ~~~~~~~~~~--~~~~~~~~s~~~-----~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~d~~~~~~~~~~~ 79 (351)
T PRK05975 7 DHPFLSGLFG--DDEIAALFSAEA-----DIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEPDLAALRHATARD 79 (351)
T ss_pred ccchhhccCC--CHHHHHHcCcHH-----HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCCCHHHHhhHHHhc
Confidence 4566777884 789999999765 456788899999999999999999999999999876532111000000111
Q ss_pred CCchhhhHHHHHHHHhC-CCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCC
Q 010020 138 REDVHMNIEAALTDIIG-EPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQR 216 (520)
Q Consensus 138 ~~dv~~~ie~~l~e~~g-~~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~ 216 (520)
++++ .++++.+.+.+| +.|+|||+|+||||++||+++|++|+++..|.+.|..++++|.++|++|+||+|+||||+||
T Consensus 80 g~~v-~~~v~~l~~~~g~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~ 158 (351)
T PRK05975 80 GVVV-PALVRQLRAAVGEEAAAHVHFGATSQDVIDTSLMLRLKAASEILAARLGALIARLDALEATFGQNALMGHTRMQA 158 (351)
T ss_pred CCcH-HHHHHHHHHHhCchhhCcccCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecccCCCc
Confidence 3333 568899999998 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccC----CCCCCccHHHHHHhcCCCCCCCCccccccchHHH
Q 010020 217 AQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALA----GTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFV 292 (520)
Q Consensus 217 A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~----Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~ 292 (520)
|||||||||+++|+++|.|+++||.+++++++.+||||++++ |+.++.+++++|++|||..+. +|+++||++
T Consensus 159 A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGGAvGt~~~~~~~~~~~~~~~a~~LGl~~~~----~~~~~rD~~ 234 (351)
T PRK05975 159 AIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGGAAGTLEKLGGKAAAVRARLAKRLGLEDAP----QWHSQRDFI 234 (351)
T ss_pred CeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccHhccCccCCCcHHHHHHHHHHHhCcCCCc----chhhccHHH
Confidence 999999999999999999999999999999999999986644 233467899999999997542 589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcc
Q 010020 293 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 372 (520)
Q Consensus 293 ~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~ 372 (520)
++++++++.++++|+|||+||++|+++| ||+.+|. ++|||||||||||+.+|.++++++.+.+++.++..++ +.
T Consensus 235 ~e~~~~la~la~~l~kiA~Di~ll~s~e-gev~~~~--~~GSS~MPhKrNPv~~E~i~~~ar~~~~~~~~~~~~~---~~ 308 (351)
T PRK05975 235 ADFAHLLSLVTGSLGKFGQDIALMAQAG-DEISLSG--GGGSSAMPHKQNPVAAETLVTLARFNATQVSGLHQAL---VH 308 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCC--CCccCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 9999999999999999999999999999 9999995 5999999999999999999999999999998887655 78
Q ss_pred cccccc---ccccccHHHHHHHHHHHHHHHHHHHhhccc
Q 010020 373 AYNRDL---QEDKEPTFDSVKTIVGMLEVSAEFAQNITF 408 (520)
Q Consensus 373 ~~erD~---~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v 408 (520)
+||||. +.+|..+|+++.++..++..+..+++||++
T Consensus 309 ~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 309 EQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred hhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 999996 578999999999999999999999999975
No 41
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=2.4e-67 Score=554.77 Aligned_cols=344 Identities=18% Similarity=0.143 Sum_probs=293.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCH------HhHHHHHHHHHH--------HHHHHhcCCcccccCCCchhhhHHHHHHH
Q 010020 86 ALYKHDIMGSKAHASMLAKQGLISD------SDKNSILRGLDE--------IERQIEAGKFMWRTDREDVHMNIEAALTD 151 (520)
Q Consensus 86 ~l~~~~i~~~~A~a~al~e~GiI~~------~~a~~I~~al~~--------i~~~~~~~~~~~~~~~~dv~~~ie~~l~e 151 (520)
..+.+.+.++.|++++++++|+||+ ++++.|.+++.. |.+... ..+||+ +++++.|.+
T Consensus 9 ~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~~~~~~~~~-------~~~hdv-~al~~~l~~ 80 (425)
T cd01598 9 ALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDALRIKEIEA-------TTNHDV-KAVEYFLKE 80 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcCccCHHHHHHHHH-------HHCCCc-HHHHHHHHH
Confidence 4466778888999999999999999 999999887643 222222 236777 889999999
Q ss_pred HhC------CCCCcccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHH
Q 010020 152 IIG------EPAKKLHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQH 224 (520)
Q Consensus 152 ~~g------~~g~~lH~G~S~nDi~~Ta~~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~ 224 (520)
.+| +.++|||+|+|||||+||+++|++|+++ ..+.+.|..++++|.++|++|+||+|+||||+||||||||||
T Consensus 81 ~~g~~~~~~~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~A~P~TfG~ 160 (425)
T cd01598 81 KFETLGLLKKIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPATPTTLGK 160 (425)
T ss_pred HhcccccchhhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccCeehhHHH
Confidence 997 3578999999999999999999999999 567899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCC-----------CCccHHHHHHhcCCCCCCCCcccc-ccchHHH
Q 010020 225 LLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTG-----------LPIDRFMTAEALEFTAPMRNSIDA-VSDRDFV 292 (520)
Q Consensus 225 ~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~-----------~~~~r~~la~~LG~~~~~~n~~~~-~~~rd~~ 292 (520)
|+++|+++|.|+++||.++. ..+++||++ ||. ++..++.+++.|||..+. .+| +++||++
T Consensus 161 ~~a~w~~~L~r~~~RL~~~~---~~g~~gGav--Gt~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~---~~~~v~~rD~~ 232 (425)
T cd01598 161 ELAVFVYRLERQYKQLKQIE---ILGKFNGAV--GNFNAHLVAYPDVDWRKFSEFFVTSLGLTWNP---YTTQIEPHDYI 232 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HhheeeCch--hhhhhhhhccCcccHHHHHHHHHHHhCcCCCC---cccchhccHHH
Confidence 99999999999999999983 455577644 331 123467799999999753 457 6999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcceee-ccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCc
Q 010020 293 LEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT-PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLP 371 (520)
Q Consensus 293 ~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~-l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p 371 (520)
+|++++++.++++|+|||+||++|++++ |+. +++++++|||||||||||+.+|+++++++.+.+....++..+. +
T Consensus 233 ~e~~~~La~la~~L~kia~Di~ll~s~g--e~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~~~~~~~~--~ 308 (425)
T cd01598 233 AELFDALARINTILIDLCRDIWGYISLG--YFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLNHLSAKLP--I 308 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc--ceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhhh--h
Confidence 9999999999999999999999999984 443 4567899999999999999999999999999998877775441 5
Q ss_pred cccccccccc--cccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHH
Q 010020 372 LAYNRDLQED--KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAV 449 (520)
Q Consensus 372 ~~~erD~~~~--~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v 449 (520)
++||||++.+ +..+++++..+..+++.+..++++|+||++||++|+..++.+.++.++.+++. +++++||++|++++
T Consensus 309 ~~~eRD~~~~~~e~~~~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~~Ah~~V~~~~ 387 (425)
T cd01598 309 SRLQRDLTDSTVLRNIGVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIPNPYEKLKDLT 387 (425)
T ss_pred hhhcccccchhhhccHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChHhHHHHHHHHh
Confidence 7899999753 33449999999999999999999999999999999965554666666676666 88899999999988
Q ss_pred H
Q 010020 450 A 450 (520)
Q Consensus 450 ~ 450 (520)
+
T Consensus 388 ~ 388 (425)
T cd01598 388 R 388 (425)
T ss_pred C
Confidence 6
No 42
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=1.7e-65 Score=545.30 Aligned_cols=412 Identities=16% Similarity=0.138 Sum_probs=321.8
Q ss_pred cccCCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCC---CH---HhHHHHHHHHHHHHH-HHhcCCcc
Q 010020 61 LWGGRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLI---SD---SDKNSILRGLDEIER-QIEAGKFM 133 (520)
Q Consensus 61 ~~g~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI---~~---~~a~~I~~al~~i~~-~~~~~~~~ 133 (520)
.+++||+..+.++...|++.. ++.+.+.++.|++.++++.|+| |+ +.++.|.+++.++.. +...-.-.
T Consensus 14 pl~~ry~~~~~e~~~ifSd~a-----~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~d~~~~~~~ 88 (458)
T PLN02848 14 PLDGRYWSKVKDLRPIFSEFG-----LIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVDDALEVKKI 88 (458)
T ss_pred CchhhhcCCcHHHHHHcCHHH-----HHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHhhHHHHHHH
Confidence 355688755689999999765 4557778889999999999997 77 999999887633200 00000000
Q ss_pred cccCCCchhhhHHHHHHHHhC---C---CCCcccCCCCchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Q 010020 134 WRTDREDVHMNIEAALTDIIG---E---PAKKLHTARSRNDQVLTDFRLWCRDAIDT-IVRSIQRLQVALVKLALKNEGL 206 (520)
Q Consensus 134 ~~~~~~dv~~~ie~~l~e~~g---~---~g~~lH~G~S~nDi~~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~lA~~~~~t 206 (520)
....+||+ +++++.+.+++| + .++|||+|+|||||+||+++|++|+++.. +.+.|..++++|.++|++|++|
T Consensus 89 e~~t~hdv-~a~~~~l~~~~~~~~~~~~~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~~~L~~l~~aL~~lA~~~~dt 167 (458)
T PLN02848 89 ERVTNHDV-KAVEYFLKQKCKSHPELAKVLEFFHFACTSEDINNLSHALMLKEGVNSVVLPTMDEIIKAISSLAHEFAYV 167 (458)
T ss_pred HHHhCCCc-HHHHHHHHHHhccccchhhhhCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 01247787 889999999996 2 45899999999999999999999999998 9999999999999999999999
Q ss_pred cccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccC----CCCCC-ccHHH----HHHhcCCCC
Q 010020 207 IVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALA----GTGLP-IDRFM----TAEALEFTA 277 (520)
Q Consensus 207 ~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~----Gt~~~-~~r~~----la~~LG~~~ 277 (520)
+|+||||+|||+|||||||+++|+++|.|+++||.++. ..+++||++.+ +++++ +|+.. +++.|||..
T Consensus 168 ~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~GAvGt~aa~~~~~~~~d~~~v~~~la~~LGL~~ 244 (458)
T PLN02848 168 PMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAGAVGNYNAHMSAYPEVDWPAVAEEFVTSLGLTF 244 (458)
T ss_pred eeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeecccchhhhhhhccCCCCHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999872 34666654311 12344 66544 556799984
Q ss_pred -CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhh
Q 010020 278 -PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSAR 355 (520)
Q Consensus 278 -~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~ 355 (520)
|. .+++++||+++|++++++.++++|+|||+|++.|+ |+||+.++ .++++|||||||||||+.+|+++++++.
T Consensus 245 ~~~---~~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~--e~ge~~e~~~~~~~GSS~MP~KrNPv~~E~i~~~a~~ 319 (458)
T PLN02848 245 NPY---VTQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI--SLGYFKQITKAGEVGSSTMPHKVNPIDFENSEGNLGL 319 (458)
T ss_pred CCc---hhhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcCCcccccCCCCCCcCCCCCCcCcHHHHHHHHHHHH
Confidence 33 24579999999999999999999999999988777 77777533 4579999999999999999999999999
Q ss_pred hhccHHHHHHHHcc-Ccccccccccc---ccccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChh-HHHHHHHH
Q 010020 356 VIGDLVTLLTLCKG-LPLAYNRDLQE---DKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYL-DATTLADY 430 (520)
Q Consensus 356 v~g~~~~~~~~~~~-~p~~~erD~~~---~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~-~at~la~~ 430 (520)
+.|.+..++. + ..++||||+.. +|.. ++++..+..+++.+..++++|+||++||++|+..++. +++.+...
T Consensus 320 ~~~~~~~~~~---~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~~~l~~L~v~~~rm~~nl~~~~~~~sE~~~~~ 395 (458)
T PLN02848 320 ANAELSHLSM---KLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTLRGIGKLQVNEARLAEDLDQTWEVLAEPIQTV 395 (458)
T ss_pred HHHHHHHHHh---cCcchhhccccchhhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHccchhHHHHHHHH
Confidence 9999999884 4 34679999865 4554 9999999999999999999999999999999965543 56656555
Q ss_pred HHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCCh--HHHHhccChhHhhhhcccCCCccHHHHHH
Q 010020 431 LVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFD--KDVYEYLGVENAIRKFSSFGSTGSACVTE 504 (520)
Q Consensus 431 Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~~--~~~~~~ldp~~~v~~r~~~gG~a~~~v~~ 504 (520)
|++ +++.+||++|+++++.-......+.++.. -....+ ++....|.|.. |+|.+++.+++
T Consensus 396 l~~--~G~~~A~e~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~-------y~g~~~~~~~~ 457 (458)
T PLN02848 396 MRR--YGVPEPYEKLKELTRGRAVTKESMREFIE-----GLELPEEAKDQLLKLTPHT-------YIGAAAALALN 457 (458)
T ss_pred HHH--hChHHHHHHHHHHHHHccCCHHHHHHHHH-----HcCCCHHHHHHHHhCCchh-------hhchHHHHHhh
Confidence 555 66789999999998642222222323221 111111 12234678884 99999998864
No 43
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=1.3e-67 Score=540.83 Aligned_cols=295 Identities=37% Similarity=0.518 Sum_probs=270.2
Q ss_pred CCCcccHHHHHHhcccchhccHHHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhc-CCcccccCCCchh
Q 010020 64 GRFEESVTDAVEKFTESISYDKALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEA-GKFMWRTDREDVH 142 (520)
Q Consensus 64 ~r~~~~~~~~~~~f~~~~~~~~~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~-~~~~~~~~~~dv~ 142 (520)
|||+.+++++...|+++..++.++..+++.++.||++++++.|+||++.+++|.++|+++..+... +.|++....+++|
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~~~~l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~~~~~~~~~~~~~~~ 80 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARFDFWLAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDLDDAFELDEIEEDIG 80 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCTHGHHHHCSCSSSHH
T ss_pred CCcCCchHHHHHHHCHHHHhCCEeeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhccccccchhhhhccch
Confidence 467778899999999999999999999999999999999999999999999999999999874332 3567777777788
Q ss_pred hhHHHHHHHHhC-------CCCCcccCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccC
Q 010020 143 MNIEAALTDIIG-------EPAKKLHTARSRNDQVLTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHL 214 (520)
Q Consensus 143 ~~ie~~l~e~~g-------~~g~~lH~G~S~nDi~~Ta~~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~ 214 (520)
..++..+.+.+| +.++|||+|+||||++||+++|++|+++ ..|.+.|..++++|.++|++|++|+||||||+
T Consensus 81 ~~~~~~l~~~~~e~~~~~~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l~~~L~~~a~~~~~t~~~grTh~ 160 (312)
T PF00206_consen 81 HAVEANLNEVLGELLGEPPEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKALIDALAELAEEHKDTPMPGRTHG 160 (312)
T ss_dssp HHHHHHHHHHHHHHHTHSSGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEETT
T ss_pred hHHHHHHHHHhhhhhhccccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhcCceecccccc
Confidence 777776666655 7899999999999999999999999999 66999999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHH---HHHHhcC-CCC---CCCCcccccc
Q 010020 215 QRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRF---MTAEALE-FTA---PMRNSIDAVS 287 (520)
Q Consensus 215 Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~---~la~~LG-~~~---~~~n~~~~~~ 287 (520)
|||+|||||||+++|+++|.|+++||.+++++++.+|||||+.+|++++++++ ++++.|| |.. +..|+.+|++
T Consensus 161 Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~~~~L~~~~~l~~~~~~~~~~~~ 240 (312)
T PF00206_consen 161 QPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERVAEELGEFTGLGVPAPNWHDAVS 240 (312)
T ss_dssp EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHHHHHHHHHHCSTEECSSHHHHHH
T ss_pred ccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhHHhhhhhhhhcccchhhcccccc
Confidence 99999999999999999999999999999999999999999888999999998 8999999 766 7888889999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcceeeccCCC-CCCCCCCCCCCCchhHHHhhhhHhhhhc
Q 010020 288 DRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSV-STGSSIMPQKKNPDPMELVRGKSARVIG 358 (520)
Q Consensus 288 ~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e~gev~l~~~~-~~GSSiMPqKrNP~~~E~i~~~a~~v~g 358 (520)
+||++++++++++.++++|+|||+||++|+|+|+||+++|.+. ++|||+|||||||+.+|+++++|+++.|
T Consensus 241 ~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s~e~g~~~~~~~~~~~GSS~MP~K~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 241 SRDRLAELASALALLAGTLSKIAEDLRLLSSTEIGEVEEPFPEGQVGSSIMPHKRNPVILENIRGLARQVIG 312 (312)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSEEEEGGGSSSCSSSSTTCEETHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeecccccccCCCccCCCCCCCHHHHHHHHhhhcCcC
Confidence 9999999999999999999999999999999999999998655 4599999999999999999999999986
No 44
>KOG1317 consensus Fumarase [Energy production and conversion]
Probab=100.00 E-value=7.8e-58 Score=445.73 Aligned_cols=428 Identities=20% Similarity=0.218 Sum_probs=370.0
Q ss_pred ccccccccccccCCccccchhccccCCcccccccCCCcccHHHHHHhcccc---hhccHHHHHHHHHHHHHHHHHHHHcC
Q 010020 30 LRSSLSFNYTYSAEPKHKTVLCKMSASKEVKLWGGRFEESVTDAVEKFTES---ISYDKALYKHDIMGSKAHASMLAKQG 106 (520)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~f~~~---~~~~~~l~~~~i~~~~A~a~al~e~G 106 (520)
..-++|.|+||+++||+|+|||+ +|.+...+|... -+.+..+++++...++|.|..+.+.|
T Consensus 26 ~~fR~E~DtfGe~~VP~DkyyGA----------------QT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~G 89 (487)
T KOG1317|consen 26 SSFRTERDTFGEIEVPADKYYGA----------------QTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYG 89 (487)
T ss_pred cchhhhccccCcccccchhhhhH----------------HHHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhC
Confidence 35578999999999999998875 688888889854 36777899999999999999999999
Q ss_pred CCCHHhHHHHHHHHHHHHHHHhcCCccc---cc-CCCchhhhHH----HHHHHHhC-CCCC-ccc------CCCCchhHH
Q 010020 107 LISDSDKNSILRGLDEIERQIEAGKFMW---RT-DREDVHMNIE----AALTDIIG-EPAK-KLH------TARSRNDQV 170 (520)
Q Consensus 107 iI~~~~a~~I~~al~~i~~~~~~~~~~~---~~-~~~dv~~~ie----~~l~e~~g-~~g~-~lH------~G~S~nDi~ 170 (520)
+++..+++|.++++++..+...++||+ +. .++..|||.+ ++.+|.+| +.|. .+| ..+||||.+
T Consensus 90 -LDpkis~Ai~~AadeV~~GKL~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~VHPNdHvN~SQSSNDTF 168 (487)
T KOG1317|consen 90 -LDPKISKAISQAADEVASGKLNDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKKVHPNDHVNKSQSSNDTF 168 (487)
T ss_pred -CChHHHHHHHHHHHHHhcCcccccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcccCCccccccccccCCcc
Confidence 899999999999999999988999994 43 4888888865 67778888 6664 366 689999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 010020 171 LTDFRLWCRDAI-DTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNF 249 (520)
Q Consensus 171 ~Ta~~L~lr~~l-~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~ 249 (520)
+|++++..--.+ ..|++.|..|.++|..++.+|+|++.+||||.|+|.|.|+|++|++|++.+...++|+..+.+|+..
T Consensus 169 PtamHIa~~~ei~~~L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~ 248 (487)
T KOG1317|consen 169 PTAMHIAAATEINSRLIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQ 248 (487)
T ss_pred chHHHHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHH
Confidence 999999987777 4799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCCccH-------HHHHHhcCCCC-CCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-
Q 010020 250 CPLGACALAGTGLPIDR-------FMTAEALEFTA-PMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEE- 320 (520)
Q Consensus 250 ~plGg~a~~Gt~~~~~r-------~~la~~LG~~~-~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~s~e- 320 (520)
...||+|+ ||+++.-+ ++++++.||+. ...|.+.+.+.+|.++|+..+|..++.+|-||++||+++.|++
T Consensus 249 LA~GGTAV-GTGLNTr~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPR 327 (487)
T KOG1317|consen 249 LAQGGTAV-GTGLNTRKGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPR 327 (487)
T ss_pred HhcCCccc-cccccccccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCC
Confidence 99999998 99887643 45899999995 5788899999999999999999999999999999999999998
Q ss_pred --cceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccccccccccHHHHHHHHHHHHHH
Q 010020 321 --FGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEV 398 (520)
Q Consensus 321 --~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~~~~~l~~~~~~~~~~l~~ 398 (520)
+||+.+|+ ..+||||||+|+||..||.+...|.+|+|+..++.....+-.++.|---.....++..++.++.++.-.
T Consensus 328 cGlgEL~LPE-NEPGSSIMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~s 406 (487)
T KOG1317|consen 328 CGLGELMLPE-NEPGSSIMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVS 406 (487)
T ss_pred CCccccccCC-CCCCcccCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhh
Confidence 79999995 689999999999999999999999999999876643333222222211123345788999999999999
Q ss_pred HH-HHHhhcccCHHHHHHhcccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCChHH
Q 010020 399 SA-EFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKD 477 (520)
Q Consensus 399 ~~-~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~~~~ 477 (520)
|. .|+.||+.|++|+.+.+..++++.|+|.+.+ +|+...++++.|.++|.+|++-.++. --..+++
T Consensus 407 F~~nCV~GI~aN~erI~kll~eSLMLVTALNPhI---------GYD~aAkiAKtAhKng~TLk~eal~l----G~lTeeq 473 (487)
T KOG1317|consen 407 FTKNCVVGIEANKERIAKLLNESLMLVTALNPHI---------GYDNAAKIAKTAHKNGTTLKEEALKL----GVLTEEQ 473 (487)
T ss_pred hhhhhhhcccCCHHHHHHHHHhhhhhhhccCCcc---------CchhHHHHHHHHhhcCCcHHHHHHHh----cCCCHHH
Confidence 98 5999999999999999999999888887776 88999999999999999998765532 1233678
Q ss_pred HHhccChhHhhh
Q 010020 478 VYEYLGVENAIR 489 (520)
Q Consensus 478 ~~~~ldp~~~v~ 489 (520)
+.++..|+.++.
T Consensus 474 FdewV~Pe~Mlg 485 (487)
T KOG1317|consen 474 FDEWVVPEKMLG 485 (487)
T ss_pred HHhhhCHHhccC
Confidence 888999997543
No 45
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.2e-48 Score=396.92 Aligned_cols=393 Identities=17% Similarity=0.136 Sum_probs=333.1
Q ss_pred HHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCcccc----c-CCCchhhhHHHHHHHHhCCCCCcccCCCCchhHH
Q 010020 96 KAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKFMWR----T-DREDVHMNIEAALTDIIGEPAKKLHTARSRNDQV 170 (520)
Q Consensus 96 ~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~~~~----~-~~~dv~~~ie~~l~e~~g~~g~~lH~G~S~nDi~ 170 (520)
+|.|.....++.||+++++++...++- ...+|+.- . -.+|| |++++.+.+.|..+.+++|+|+|++++.
T Consensus 40 lA~ae~~lgL~~itk~ai~e~~s~~~~-----e~~d~~~l~~ee~r~~hdV-mahvh~~~~~cp~aagiihlgatsc~vt 113 (481)
T KOG2700|consen 40 LAEAEKELGLTTITKEAIEEMKSSRDI-----ENIDFTALSPEEGRYRHDV-MAHVHSFGELCPIAAGIIHLGATSCFVT 113 (481)
T ss_pred hhhhhhcCCcccchHHHHHHHHhhccc-----cccchhhcChhhhhhcccH-HHHHHHHHhhcchhcceEEeeeeeeeec
Confidence 555655555666999999998775431 11122211 1 27888 9999999999996677999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHHHHHHHHHHhhhhhccc
Q 010020 171 LTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFC 250 (520)
Q Consensus 171 ~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~ 250 (520)
|.+..+.+|++.+.+.+.|..+++.|..++.+|++++|.||||+|+|+|+|||++.+-|..+|.+++++|..+++++...
T Consensus 114 dnadli~~rd~~k~i~~~l~~vIdrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~ 193 (481)
T KOG2700|consen 114 DNADLIELRDASKLILPYLAGVIDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFR 193 (481)
T ss_pred CCccceechhHHHHHHHHHHHHHHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCc------c-H------HHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010020 251 PLGACALAGTGLPI------D-R------FMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWA 317 (520)
Q Consensus 251 plGg~a~~Gt~~~~------~-r------~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~L~ria~Dl~ll~ 317 (520)
.++|+. ||...+ | . +.+++.+||..+..- ..++.+|+...++.+.+++++++..|+|.|+++++
T Consensus 194 ~~kga~--gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~-TGQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~ 270 (481)
T KOG2700|consen 194 GLKGAT--GTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIV-TGQTYSRKTDAEEVAPLASLGATAHKYATDIRLLA 270 (481)
T ss_pred ccccch--hhHHHHHHhhcccHHHHHHHHHHHHHHhCCCccccc-cCCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998644 553221 1 1 257899999976542 25889999999999999999999999999999999
Q ss_pred ccCcceeecc-CCCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccccccc---ccccHHHHHHHHH
Q 010020 318 SEEFGFITPS-DSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQE---DKEPTFDSVKTIV 393 (520)
Q Consensus 318 s~e~gev~l~-~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD~~~---~~~~l~~~~~~~~ 393 (520)
. |+|++.| ++.+.|||.||+||||+.+|.+.++++.+.++++..+.... ..|+||++.+ .+..+|++|..+.
T Consensus 271 ~--~~ev~epFea~q~gsSaMp~krNpm~~E~itslar~l~~~v~~al~~~~--~qw~Ertl~dSa~~rivlP~~Fl~ad 346 (481)
T KOG2700|consen 271 K--FAEVEEPFEAHQIGSSAMPYKRNPMRCERITSLARHLRPYVTQALNTAS--VQWHERTLDDSANRRIVLPDAFLTAD 346 (481)
T ss_pred H--HHHhhccccccccccccCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHH--HHHhhcccccccccceechHHHHHHH
Confidence 8 9999877 77899999999999999999999999999999988875332 4699999743 5678999999999
Q ss_pred HHHHHHHHHHhhcccCHHHHHHhc--ccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHH----HHcCCChhHhhHHHH
Q 010020 394 GMLEVSAEFAQNITFNVERIKKAL--PAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALC----VSKECQLQDLSLDEM 467 (520)
Q Consensus 394 ~~l~~~~~~l~~l~vn~erm~~~l--~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a----~~~g~~l~el~~~~~ 467 (520)
..|.....+++|+.|.+.+|.+++ ..+++..+.+.+.|+++|.++++||+.|+.++.++ .++|+.+..+..-..
T Consensus 347 ~~L~~~~ni~~gl~v~p~~i~r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~~L~~~a~~~v~~e~g~~~~ie~~k~ 426 (481)
T KOG2700|consen 347 GNLGTLLNILEGLVVYPKVIERNIRDELPFMVLENIIMALVKAGLSRQEAHEGIRKLSHQAAQVVKQEGGDNDLIERAKE 426 (481)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhcc
Confidence 999999999999999999999998 56899999999999999999999999999999988 778887655533211
Q ss_pred hhcCCCChHHHHhccChhHhhhhcccCCCccHHHHHHHHHH
Q 010020 468 RSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHS 508 (520)
Q Consensus 468 ~~~~~~~~~~~~~~ldp~~~v~~r~~~gG~a~~~v~~~l~~ 508 (520)
......+.+++...+||.+ +.|-++.++.+++..
T Consensus 427 ~~~~~~v~ee~~~ll~p~~-------f~gra~dQie~~v~~ 460 (481)
T KOG2700|consen 427 DPTFKPVKEELDSLLDPLN-------FTGRAVDQIEKFVPK 460 (481)
T ss_pred cccccchHHHHHhhccchh-------cccccHHHHHHHhhh
Confidence 1122234688999999995 999999999887753
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=4.5e-39 Score=315.57 Aligned_cols=208 Identities=40% Similarity=0.475 Sum_probs=191.6
Q ss_pred HHHHHHHHhC-CCCCcc-----cCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccccCCCcc
Q 010020 145 IEAALTDIIG-EPAKKL-----HTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQ 218 (520)
Q Consensus 145 ie~~l~e~~g-~~g~~l-----H~G~S~nDi~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~ 218 (520)
++..|.+.+| +.+++. |+|+||||+.+|+.++++|+++..+.+.+..+..++..+|++|++++||||||+|+|+
T Consensus 16 i~~~L~~~~~~~~~~~~~~~~~h~g~s~~d~~~t~~~~~~~~~l~~l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~ 95 (231)
T cd01594 16 VEEVLAGRAGELAGGLHGSALVHKGRSSNDIGTTALRLALRDALDDLLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQ 95 (231)
T ss_pred HHHHHHHHHHHHhccccCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEeecccccccCc
Confidence 3556666666 444444 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHH
Q 010020 219 PVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSA 298 (520)
Q Consensus 219 P~TfG~~la~~~~~l~r~~~rL~~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~ 298 (520)
|+||||++++|.+.|.|+.+||.++ ++++++..
T Consensus 96 p~t~g~~~~~~~~~l~~~~~rL~~~-----------------------------------------------~~~~~~~~ 128 (231)
T cd01594 96 PVTLGYELRAWAQVLGRDLERLEEA-----------------------------------------------AVAEALDA 128 (231)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH-----------------------------------------------HHHHHHHH
Confidence 9999999999999999999999998 88999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcceeeccCC-CCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCccccccc
Q 010020 299 NSIIAIHLSRLGEEWVLWASEEFGFITPSDS-VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRD 377 (520)
Q Consensus 299 la~la~~L~ria~Dl~ll~s~e~gev~l~~~-~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~erD 377 (520)
++.++.+|+|||+|+++|+++|++++.+|.. .++|||+||||+||+.+|.+++++..+.|....++.+..+.+.+++.|
T Consensus 129 l~~~~~~l~r~a~d~~~~~~~~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 208 (231)
T cd01594 129 LALAAAHLSKIAEDLRLLLSGEFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTALKGGPERDNED 208 (231)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHhccccccccc
Confidence 9999999999999999999999999988865 799999999999999999999999999999999998887766788888
Q ss_pred cccccccHHHHHHHHHHHHHHH
Q 010020 378 LQEDKEPTFDSVKTIVGMLEVS 399 (520)
Q Consensus 378 ~~~~~~~l~~~~~~~~~~l~~~ 399 (520)
.+..+..+++.+..+.+++..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~l~~~ 230 (231)
T cd01594 209 SPSMREILADSLLLLIDALRLL 230 (231)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh
Confidence 8888889999999888888765
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.8e-35 Score=286.69 Aligned_cols=185 Identities=22% Similarity=0.261 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceeeccC-CCCCCCCCCCCCCCchhHHHhhhhHhhhhccHHHHHHHHccCcccccc
Q 010020 298 ANSIIAIHLSRLGEEWVLWASEEFGFITPSD-SVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNR 376 (520)
Q Consensus 298 ~la~la~~L~ria~Dl~ll~s~e~gev~l~~-~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~er 376 (520)
+++.++++|+|||+||++|+++|||||.+|. .+++|||||||||||+.+|.++++++++.|+..+++.++ +.+|||
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~---~~~~er 98 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQRSEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV---PLWHER 98 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh---HHHhcc
Confidence 9999999999999999999999999999994 789999999999999999999999999999999998876 789999
Q ss_pred ccccc---cccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhccc--ChhHHHHHHHHHHHcCCChhhHHHHHHHHHHH
Q 010020 377 DLQED---KEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPA--GYLDATTLADYLVNKQVPFRTSHDIVGKAVAL 451 (520)
Q Consensus 377 D~~~~---~~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~--~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~ 451 (520)
|.+.. |..+++++..+..++..+..++++++||++||++++.. ++++++++++.|+++|+|||+||+.|+++++.
T Consensus 99 d~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~~ 178 (216)
T PRK08937 99 DLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAME 178 (216)
T ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 98654 67899999999999999999999999999999999965 99999999999999999999999999999999
Q ss_pred HHHcCCChhHhhHHHHhhcCCC-ChHHHHhccChhH
Q 010020 452 CVSKECQLQDLSLDEMRSLNPV-FDKDVYEYLGVEN 486 (520)
Q Consensus 452 a~~~g~~l~el~~~~~~~~~~~-~~~~~~~~ldp~~ 486 (520)
+.++|+++.++..++. ++... .++++..++||+.
T Consensus 179 ~~~~g~~~~~~~~~~~-~~~~~l~~~~l~~~ldp~~ 213 (216)
T PRK08937 179 AWKNQKDLRELLEADE-RFTKQLTKEELDELFDPEA 213 (216)
T ss_pred HHHhCCCHHHHHHhCh-HhHhcCCHHHHHHHhCHHh
Confidence 9999999999887643 22223 3567899999996
No 48
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=99.49 E-value=5e-14 Score=112.50 Aligned_cols=70 Identities=41% Similarity=0.714 Sum_probs=60.5
Q ss_pred hhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCChHHHHhccChhHhhhh
Q 010020 421 YLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRK 490 (520)
Q Consensus 421 ~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~~~~~~~~ldp~~~v~~ 490 (520)
|++||++|++||++|+|||+||++|+++|+.|.++|+++.++..+++..+...+++++.+++||+.+|++
T Consensus 1 f~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~~~~V~~ 70 (70)
T PF14698_consen 1 FSTATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSELTLEELQEISPEFEEDVREALDPEASVEA 70 (70)
T ss_dssp TGGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGGS-HHHHHHH-TT--GGGGGGSSHHHHHTT
T ss_pred CccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhhCCHHHHHHHhHHhHHHHHHHCCHHHHhcC
Confidence 5789999999999999999999999999999999999999999999999988899999999999998863
No 49
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=99.00 E-value=8e-10 Score=91.03 Aligned_cols=80 Identities=15% Similarity=0.243 Sum_probs=68.9
Q ss_pred cChhHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhhhcccCCCc
Q 010020 419 AGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIRKFSSFGST 497 (520)
Q Consensus 419 ~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~~r~~~gG~ 497 (520)
+|+++++.++..|+++|+++++||++|.++++++.++|.+|.|.+.++ +.+...+ .+++.+++||.. |.|.
T Consensus 1 ~Gli~SE~v~~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d-~~i~~~ls~~el~~l~dp~~-------ylg~ 72 (81)
T PF10397_consen 1 GGLIFSERVMLALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLAD-PEIAAYLSEEELEELFDPES-------YLGN 72 (81)
T ss_dssp TTGGGHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTT-HHHHTTSHHHHHHHHT-GGG-------GCTT
T ss_pred CcchHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCC-HHHHhHCCHHHHHhhcCHHH-------HHhh
Confidence 478999999999999999999999999999999999999999998754 5576777 478899999995 9999
Q ss_pred cHHHHHHHH
Q 010020 498 GSACVTEQL 506 (520)
Q Consensus 498 a~~~v~~~l 506 (520)
++.++++++
T Consensus 73 ~~~i~~rv~ 81 (81)
T PF10397_consen 73 ADEIVDRVL 81 (81)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHC
Confidence 999999875
No 50
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=97.63 E-value=0.0003 Score=60.83 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=61.2
Q ss_pred cccccccccc--ccHHHHHHHHHHHHHHHHHHHhhcccCHHHHHHhcccChhHHHHHHHHHHHc-CCChhhHHHHHHHHH
Q 010020 373 AYNRDLQEDK--EPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVPFRTSHDIVGKAV 449 (520)
Q Consensus 373 ~~erD~~~~~--~~l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~at~la~~Lv~~-G~~fr~Ah~~v~~~v 449 (520)
.++||+.++. .++..+|....-+...+.+.+..|.||+++|.+.++.+|..-.+-...++|+ |++ ++|+.++++.
T Consensus 2 R~QRDLtDSTvlRNiGva~~~sliA~~s~lkGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~--~pYE~LK~lT 79 (115)
T PF08328_consen 2 RWQRDLTDSTVLRNIGVAFGHSLIAYKSLLKGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIP--NPYEKLKELT 79 (115)
T ss_dssp STTB-THHHHHHTTHHHHHHHHHHHHHHHHHHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-S--SHHHHHHHHH
T ss_pred cccccchHHHHHHhhhHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCC--CHHHHHHHHH
Confidence 4689998764 7899999999999999999999999999999999998887644444666666 886 8999999987
Q ss_pred H
Q 010020 450 A 450 (520)
Q Consensus 450 ~ 450 (520)
+
T Consensus 80 R 80 (115)
T PF08328_consen 80 R 80 (115)
T ss_dssp T
T ss_pred c
Confidence 6
No 51
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=96.78 E-value=0.002 Score=48.98 Aligned_cols=52 Identities=17% Similarity=0.330 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCChhhHHHHHHHHHHHHHHcCCChhHhhHHHHhhcCCCC-hHHHHhccChhHhhh
Q 010020 424 ATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVF-DKDVYEYLGVENAIR 489 (520)
Q Consensus 424 at~la~~Lv~~G~~fr~Ah~~v~~~v~~a~~~g~~l~el~~~~~~~~~~~~-~~~~~~~ldp~~~v~ 489 (520)
+|.|++++ +|+.+.+++++|.++|++++|+..+. +.+ ++++.++|||+.++.
T Consensus 2 aTaL~p~i---------GYe~aa~iAk~A~~~g~svre~v~~~-----g~lt~ee~d~ll~p~~mt~ 54 (55)
T PF10415_consen 2 ATALNPYI---------GYEKAAEIAKEALAEGRSVREVVLEE-----GLLTEEELDELLDPERMTN 54 (55)
T ss_dssp GGGGHHHH---------HHHHHHHHHHHHHHHT--HHHHHHHT-----TSS-HHHHHHHTSHHHHTT
T ss_pred eeeccchh---------ccHHHHHHHHHHHHcCCCHHHHHHHc-----CCCCHHHHHHHcCHHHcCC
Confidence 56677777 99999999999999999999998753 444 678899999998764
No 52
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=94.49 E-value=0.08 Score=55.95 Aligned_cols=163 Identities=12% Similarity=0.035 Sum_probs=84.0
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCccccccccCCCccccchHHHHHHHHHHHH---
Q 010020 159 KLHTARSRNDQVLTDFRLWCRDAID-TIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLE--- 234 (520)
Q Consensus 159 ~lH~G~S~nDi~~Ta~~L~lr~~l~-~l~~~L~~l~~~L~~lA~~~~~t~m~GrTH~Q~A~P~TfG~~la~~~~~l~--- 234 (520)
.+|..+++-|+.--.-.+-...++. .+...-.++.+...--+++..=++|.-+| ||.+.|.+.|..++..+.-..
T Consensus 182 ~f~~~~~~~~~~~~kga~gtqasf~~l~~~~~~kv~~ld~Lv~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lgat~~ 260 (481)
T KOG2700|consen 182 RFHRARTDVRFRGLKGATGTQASFLSLFLGDMDKVEKLDSLVTKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLGATAH 260 (481)
T ss_pred HHHHhhhhhhccccccchhhHHHHHHhhcccHHHHHHHHHHHHHHhCCCcccccc-CCcCCchhHHHHHHHHHHHHHHHH
Confidence 3555555555544333334444443 23333333333333334667788999999 999999999998876654332
Q ss_pred ---HHHHHHH---HhhhhhcccCCCccccCCCCCCccHHHHHHhcCCCCCCCCccccccchHHHHHHHHHHHHHHHHHHH
Q 010020 235 ---RDAGRLQ---DCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSR 308 (520)
Q Consensus 235 ---r~~~rL~---~~~~r~~~~plGg~a~~Gt~~~~~r~~la~~LG~~~~~~n~~~~~~~rd~~~e~~~~la~la~~L~r 308 (520)
-|++-|. ++.+-.+..+.|+.++ |-. .|++. .|++.. ++.++.-
T Consensus 261 k~~Tdirll~~~~ev~epFea~q~gsSaM-----p~k--------------rNpm~--------~E~its---lar~l~~ 310 (481)
T KOG2700|consen 261 KYATDIRLLAKFAEVEEPFEAHQIGSSAM-----PYK--------------RNPMR--------CERITS---LARHLRP 310 (481)
T ss_pred HHHHHHHHHHHHHHhhccccccccccccC-----CCC--------------CCCch--------hHHHhH---HHHHHHH
Confidence 2222222 2222222222222221 111 11111 122222 2222333
Q ss_pred HHHHHHHHhccCcceeeccCCCCCCCCCCCCCCCchhHHHhhhhHhhhhc
Q 010020 309 LGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIG 358 (520)
Q Consensus 309 ia~Dl~ll~s~e~gev~l~~~~~~GSSiMPqKrNP~~~E~i~~~a~~v~g 358 (520)
...+..- .+.++.. +...|+|+||+|.||+.++...+.-.+...
T Consensus 311 ~v~~al~-----~~~~qw~-Ertl~dSa~~rivlP~~Fl~ad~~L~~~~n 354 (481)
T KOG2700|consen 311 YVTQALN-----TASVQWH-ERTLDDSANRRIVLPDAFLTADGNLGTLLN 354 (481)
T ss_pred HHHHHhh-----hHHHHHh-hcccccccccceechHHHHHHHHHHHHHHH
Confidence 3333222 2223322 357899999999999999999888775543
No 53
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=79.62 E-value=11 Score=28.98 Aligned_cols=47 Identities=21% Similarity=0.369 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHhHHHHHHHHHHHHHHHhcCCc
Q 010020 86 ALYKHDIMGSKAHASMLAKQGLISDSDKNSILRGLDEIERQIEAGKF 132 (520)
Q Consensus 86 ~l~~~~i~~~~A~a~al~e~GiI~~~~a~~I~~al~~i~~~~~~~~~ 132 (520)
.|...+++..++...-..+.|.|+++.|++|.+.+++-.......+|
T Consensus 11 ~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~~~~~qnGf 57 (59)
T PF10925_consen 11 ALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQEYMQQNGF 57 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56667788889999999999999999999999999876655444443
No 54
>PF14748 P5CR_dimer: Pyrroline-5-carboxylate reductase dimerisation; PDB: 2RCY_D 3TRI_A 2IZZ_B 2GR9_B 2GRA_B 2GER_C 1YQG_A 2AG8_A 3GT0_A 2AMF_E ....
Probab=32.34 E-value=1.3e+02 Score=25.73 Aligned_cols=41 Identities=20% Similarity=0.190 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHcCCChhhHHHHHHHHHHHH----HHcCCChhHh
Q 010020 422 LDATTLADYLVNKQVPFRTSHDIVGKAVALC----VSKECQLQDL 462 (520)
Q Consensus 422 ~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a----~~~g~~l~el 462 (520)
.+.+.++++.++.|+|+.+|.+++.+...-+ .+.+.++.++
T Consensus 22 ~~~eal~~a~v~~Gl~~~~A~~lv~~t~~G~a~ll~~~~~~~~~l 66 (107)
T PF14748_consen 22 LFIEALADAAVAQGLPREEARKLVAQTFIGAAKLLEESGRSPAEL 66 (107)
T ss_dssp HHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHCSS-HHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHccCCCHHHH
Confidence 4567788888888999999999998876533 2334444444
No 55
>KOG4797 consensus Transcriptional regulator [Transcription]
Probab=25.71 E-value=1.9e+02 Score=25.08 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 010020 168 DQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKN 203 (520)
Q Consensus 168 Di~~Ta~~L~lr~~l~~l~~~L~~l~~~L~~lA~~~ 203 (520)
|.+-|-++...|+.++.|..++.+|.+....+-+++
T Consensus 55 DLVKtHLmfAVREEVe~Lk~qI~eL~er~~~Le~EN 90 (123)
T KOG4797|consen 55 DLVKTHLMFAVREEVEVLKEQIRELEERNSALEREN 90 (123)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999988887776
No 56
>PF01978 TrmB: Sugar-specific transcriptional regulator TrmB; InterPro: IPR002831 TrmB, is a protein of 38,800 apparent molecular weight, that is involved in the maltose-specific regulation of the trehalose/maltose ABC transport operon in Thermococcus litoralis. TrmB has been shown to be a maltose-specific repressor, and this inhibition is counteracted by maltose and trehalose. TrmB binds maltose and trehalose half-maximally at 20 uM and 0.5 mM sugar concentration, respectively []. Other members of this family are annotated as either transcriptional regulators or hypothetical proteins. ; PDB: 2D1H_A 3QPH_A 1SFX_A.
Probab=24.87 E-value=58 Score=25.11 Aligned_cols=43 Identities=19% Similarity=0.126 Sum_probs=31.7
Q ss_pred cccCHHHHHHhc-ccChhHHHHHHHHHHHcCCChhhHHHHHHHHHHH
Q 010020 406 ITFNVERIKKAL-PAGYLDATTLADYLVNKQVPFRTSHDIVGKAVAL 451 (520)
Q Consensus 406 l~vn~erm~~~l-~~~~~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~ 451 (520)
|.-++.++...+ ..|..++.+++..+ |+|+..+|..+..+...
T Consensus 6 Ls~~E~~vy~~Ll~~~~~t~~eIa~~l---~i~~~~v~~~L~~L~~~ 49 (68)
T PF01978_consen 6 LSENEAKVYLALLKNGPATAEEIAEEL---GISRSTVYRALKSLEEK 49 (68)
T ss_dssp HHHHHHHHHHHHHHHCHEEHHHHHHHH---TSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHcCCCCHHHHHHHH---CcCHHHHHHHHHHHHHC
Confidence 344455555555 57778888888777 89999999999888763
No 57
>PRK07634 pyrroline-5-carboxylate reductase; Reviewed
Probab=20.33 E-value=3.2e+02 Score=26.43 Aligned_cols=31 Identities=16% Similarity=0.045 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHcCCChhhHHHHHHHHHHHH
Q 010020 422 LDATTLADYLVNKQVPFRTSHDIVGKAVALC 452 (520)
Q Consensus 422 ~~at~la~~Lv~~G~~fr~Ah~~v~~~v~~a 452 (520)
.+.+.+.+.+++.|+|+++|++++.....-+
T Consensus 183 ~~~~a~~~~~~~~Gl~~~~a~~~~~~~~~g~ 213 (245)
T PRK07634 183 YFAESLIEATKSYGVDEETAKHLVIQMISGS 213 (245)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 4466788888888999999999999987744
Done!